Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07082.t1 | XP_003625999.1 | 95.9 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 3.00E-107 | 397.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07082.t1 | Q93W77 | 68.2 | 201 | 54 | 3 | 26 | 218 | 33 | 231 | 6.1e-64 | 245.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07082.t1 | G7KTN7 | 95.9 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 2.2e-107 | 397.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene07082 | 0.826101 | 3.26E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene07082 | 0.85282 | 3.59E-61 | -1.69E-46 |
| MS.gene049173 | MS.gene07082 | 0.806774 | 6.99E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene07082 | 0.876529 | 1.30E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene07082 | 0.869923 | 2.15E-66 | -1.69E-46 |
| MS.gene049285 | MS.gene07082 | 0.860283 | 2.30E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene07082 | 0.844166 | 8.94E-59 | -1.69E-46 |
| MS.gene04939 | MS.gene07082 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene07082 | 0.821201 | 4.58E-53 | -1.69E-46 |
| MS.gene049611 | MS.gene07082 | -0.817432 | 3.31E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene07082 | 0.840761 | 7.16E-58 | -1.69E-46 |
| MS.gene049634 | MS.gene07082 | -0.818868 | 1.57E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene07082 | 0.844001 | 9.90E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene07082 | 0.840942 | 6.42E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene07082 | 0.843625 | 1.25E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene07082 | 0.830084 | 3.58E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene07082 | 0.849277 | 3.59E-60 | -1.69E-46 |
| MS.gene050338 | MS.gene07082 | -0.812413 | 4.29E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene07082 | 0.962336 | 9.34E-121 | -1.69E-46 |
| MS.gene050504 | MS.gene07082 | 0.83777 | 4.27E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene07082 | 0.826316 | 2.90E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene07082 | 0.801628 | 8.23E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene07082 | 0.819969 | 8.78E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene07082 | 0.805326 | 1.41E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene07082 | 0.856909 | 2.34E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene07082 | 0.844167 | 8.94E-59 | -1.69E-46 |
| MS.gene050690 | MS.gene07082 | 0.801801 | 7.59E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene07082 | 0.841772 | 3.88E-58 | -1.69E-46 |
| MS.gene050710 | MS.gene07082 | -0.814704 | 1.35E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene07082 | 0.817758 | 2.79E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene07082 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene05079 | MS.gene07082 | -0.845041 | 5.20E-59 | -1.69E-46 |
| MS.gene050809 | MS.gene07082 | -0.830123 | 3.51E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene07082 | 0.844693 | 6.46E-59 | -1.69E-46 |
| MS.gene05081 | MS.gene07082 | 0.82496 | 6.08E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene07082 | 0.850824 | 1.32E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene07082 | 0.848264 | 6.85E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene07082 | 0.825039 | 5.83E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene07082 | 0.800955 | 1.13E-48 | -1.69E-46 |
| MS.gene050986 | MS.gene07082 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene07082 | 0.803597 | 3.23E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene07082 | -0.80409 | 2.55E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene07082 | -0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene051167 | MS.gene07082 | -0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene07082 | 0.86852 | 6.14E-66 | -1.69E-46 |
| MS.gene051317 | MS.gene07082 | 0.848908 | 4.54E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene07082 | 0.822723 | 2.03E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene07082 | -0.805067 | 1.60E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene07082 | 0.862751 | 4.06E-64 | -1.69E-46 |
| MS.gene051694 | MS.gene07082 | 0.816229 | 6.16E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene07082 | 0.802018 | 6.85E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene07082 | 0.822196 | 2.70E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene07082 | 0.855419 | 6.39E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene07082 | 0.847657 | 1.01E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene07082 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene07082 | 0.870319 | 1.60E-66 | -1.69E-46 |
| MS.gene052129 | MS.gene07082 | -0.849247 | 3.65E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene07082 | 0.807909 | 4.01E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene07082 | 0.801556 | 8.51E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene07082 | 0.864264 | 1.38E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene07082 | 0.829685 | 4.48E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene07082 | 0.807523 | 4.85E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene07082 | 0.820802 | 5.66E-53 | -1.69E-46 |
| MS.gene052805 | MS.gene07082 | -0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene07082 | 0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene07082 | 0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene07082 | 0.824896 | 6.30E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene07082 | 0.877937 | 4.21E-69 | -1.69E-46 |
| MS.gene052872 | MS.gene07082 | 0.884943 | 1.25E-71 | -1.69E-46 |
| MS.gene052966 | MS.gene07082 | 0.828721 | 7.68E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene07082 | 0.824108 | 9.65E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene07082 | 0.860628 | 1.81E-63 | -1.69E-46 |
| MS.gene053108 | MS.gene07082 | -0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene07082 | 0.819289 | 1.26E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene07082 | 0.830133 | 3.49E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene07082 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene07082 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene07082 | 0.809537 | 1.80E-50 | -1.69E-46 |
| MS.gene053384 | MS.gene07082 | 0.808034 | 3.78E-50 | -1.69E-46 |
| MS.gene053421 | MS.gene07082 | -0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene07082 | 0.820686 | 6.02E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene07082 | 0.842576 | 2.38E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene07082 | 0.824536 | 7.65E-54 | -1.69E-46 |
| MS.gene053579 | MS.gene07082 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene07082 | 0.886509 | 3.21E-72 | -1.69E-46 |
| MS.gene053776 | MS.gene07082 | -0.807339 | 5.30E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene07082 | 0.859584 | 3.74E-63 | -1.69E-46 |
| MS.gene053916 | MS.gene07082 | 0.871239 | 7.95E-67 | -1.69E-46 |
| MS.gene053920 | MS.gene07082 | -0.816006 | 6.91E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene07082 | 0.804159 | 2.47E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene07082 | -0.818555 | 1.84E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene07082 | 0.83048 | 2.87E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene07082 | 0.855209 | 7.36E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene07082 | 0.851381 | 9.21E-61 | -1.69E-46 |
| MS.gene054706 | MS.gene07082 | -0.825669 | 4.13E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene07082 | 0.813573 | 2.39E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene07082 | -0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene07082 | 0.83395 | 3.97E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene07082 | 0.830932 | 2.22E-55 | -1.69E-46 |
| MS.gene054955 | MS.gene07082 | 0.807962 | 3.91E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene07082 | 0.81611 | 6.55E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene07082 | 0.891718 | 3.08E-74 | -1.69E-46 |
| MS.gene055289 | MS.gene07082 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene07082 | 0.8369 | 7.13E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene07082 | 0.871679 | 5.68E-67 | -1.69E-46 |
| MS.gene055577 | MS.gene07082 | 0.879463 | 1.22E-69 | -1.69E-46 |
| MS.gene055636 | MS.gene07082 | 0.808853 | 2.52E-50 | -1.69E-46 |
| MS.gene055638 | MS.gene07082 | 0.817995 | 2.47E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene07082 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene07082 | 0.856688 | 2.72E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene07082 | 0.836185 | 1.09E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene07082 | 0.852257 | 5.20E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene07082 | 0.816555 | 5.21E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene07082 | 0.833669 | 4.67E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene07082 | 0.893859 | 4.24E-75 | -1.69E-46 |
| MS.gene055956 | MS.gene07082 | -0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene07082 | 0.840989 | 6.24E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene07082 | 0.805869 | 1.08E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene07082 | 0.847088 | 1.44E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene07082 | 0.834801 | 2.43E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene07082 | 0.838341 | 3.05E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene07082 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene07082 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene07082 | -0.84099 | 6.23E-58 | -1.69E-46 |
| MS.gene05664 | MS.gene07082 | 0.816018 | 6.87E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene07082 | 0.855914 | 4.58E-62 | -1.69E-46 |
| MS.gene056678 | MS.gene07082 | -0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene07082 | -0.807956 | 3.92E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene07082 | 0.825852 | 3.74E-54 | -1.69E-46 |
| MS.gene056697 | MS.gene07082 | -0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene07082 | -0.821654 | 3.60E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene07082 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene056903 | MS.gene07082 | 0.834597 | 2.73E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene07082 | 0.824237 | 9.00E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene07082 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene07082 | 0.813646 | 2.30E-51 | -1.69E-46 |
| MS.gene057246 | MS.gene07082 | 0.814398 | 1.57E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene07082 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene07082 | 0.828871 | 7.06E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene07082 | 0.844063 | 9.53E-59 | -1.69E-46 |
| MS.gene057717 | MS.gene07082 | -0.833914 | 4.05E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene07082 | 0.814262 | 1.69E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene07082 | 0.844523 | 7.17E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene07082 | 0.822147 | 2.77E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene07082 | 0.858961 | 5.75E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene07082 | 0.871717 | 5.52E-67 | -1.69E-46 |
| MS.gene057927 | MS.gene07082 | 0.802758 | 4.82E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene07082 | 0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene07082 | 0.811389 | 7.18E-51 | -1.69E-46 |
| MS.gene058158 | MS.gene07082 | -0.835302 | 1.82E-56 | -1.69E-46 |
| MS.gene058334 | MS.gene07082 | -0.814767 | 1.30E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene07082 | 0.821553 | 3.80E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene07082 | 0.812936 | 3.30E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene07082 | 0.860783 | 1.62E-63 | -1.69E-46 |
| MS.gene058452 | MS.gene07082 | -0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene07082 | 0.834025 | 3.80E-56 | -1.69E-46 |
| MS.gene058603 | MS.gene07082 | -0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene07082 | 0.832196 | 1.08E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene07082 | 0.852725 | 3.82E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene07082 | 0.853161 | 2.87E-61 | -1.69E-46 |
| MS.gene059022 | MS.gene07082 | 0.827449 | 1.55E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene07082 | 0.86208 | 6.53E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene07082 | 0.806075 | 9.81E-50 | -1.69E-46 |
| MS.gene059079 | MS.gene07082 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene07082 | 0.828651 | 7.99E-55 | -1.69E-46 |
| MS.gene05914 | MS.gene07082 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene07082 | -0.828233 | 1.01E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene07082 | 0.869508 | 2.94E-66 | -1.69E-46 |
| MS.gene059526 | MS.gene07082 | -0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene07082 | 0.857707 | 1.36E-62 | -1.69E-46 |
| MS.gene059699 | MS.gene07082 | -0.832291 | 1.03E-55 | -1.69E-46 |
| MS.gene059703 | MS.gene07082 | -0.829292 | 5.59E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene07082 | 0.855968 | 4.42E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene07082 | 0.812193 | 4.79E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene07082 | 0.818947 | 1.50E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene07082 | 0.818988 | 1.47E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene07082 | 0.837087 | 6.39E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene07082 | 0.808993 | 2.36E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene07082 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene060341 | MS.gene07082 | 0.802612 | 5.17E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene07082 | -0.838668 | 2.51E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene07082 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene07082 | 0.870438 | 1.46E-66 | -1.69E-46 |
| MS.gene060804 | MS.gene07082 | 0.829757 | 4.30E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene07082 | 0.84111 | 5.79E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene07082 | 0.812171 | 4.85E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene07082 | 0.837484 | 5.06E-57 | -1.69E-46 |
| MS.gene060981 | MS.gene07082 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene07082 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene07082 | 0.852019 | 6.07E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene07082 | 0.845123 | 4.94E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene07082 | 0.802778 | 4.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07082.t1 | MTR_7g109850 | 95.872 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 8.48e-152 | 420 |
| MS.gene07082.t1 | MTR_8g038785 | 87.313 | 134 | 15 | 1 | 1 | 134 | 1 | 132 | 1.12e-74 | 236 |
| MS.gene07082.t1 | MTR_2g005900 | 42.308 | 156 | 84 | 3 | 66 | 216 | 68 | 222 | 1.06e-29 | 110 |
| MS.gene07082.t1 | MTR_2g036690 | 37.267 | 161 | 99 | 2 | 51 | 210 | 71 | 230 | 7.38e-24 | 95.5 |
| MS.gene07082.t1 | MTR_2g036690 | 44.248 | 113 | 59 | 2 | 51 | 160 | 71 | 182 | 7.57e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07082.t1 | AT4G01940 | 67.822 | 202 | 55 | 3 | 25 | 218 | 32 | 231 | 4.89e-89 | 262 |
| MS.gene07082.t1 | AT5G49940 | 35.897 | 195 | 109 | 5 | 27 | 216 | 51 | 234 | 3.88e-26 | 101 |
| MS.gene07082.t1 | AT4G25910 | 33.180 | 217 | 128 | 6 | 12 | 212 | 11 | 226 | 9.38e-24 | 95.1 |
| MS.gene07082.t1 | AT5G49940 | 53.165 | 79 | 35 | 1 | 71 | 149 | 85 | 161 | 1.71e-21 | 87.8 |
Find 44 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACCACAACTATGAAAA+TGG | 0.150095 | 7.2:+6191222 | MS.gene07082:CDS |
| CACTTGCACGATATCTTTAA+TGG | 0.162531 | 7.2:-6191281 | None:intergenic |
| CGTGTTCTTAAGGAGAAATT+TGG | 0.227866 | 7.2:+6191253 | MS.gene07082:CDS |
| TTCGTTGGTATTGAACAAAT+TGG | 0.356289 | 7.2:-6190887 | None:intergenic |
| ATCCCGGAGAAGACTGGTTC+TGG | 0.389633 | 7.2:-6191036 | None:intergenic |
| AAGGTAACATTGAGAATATC+TGG | 0.389748 | 7.2:-6192331 | None:intergenic |
| CTGGTTCTGGTTAGCGGTAG+AGG | 0.412467 | 7.2:-6191023 | None:intergenic |
| GGGAATCGAACGTGTTCTTA+AGG | 0.422078 | 7.2:+6191243 | MS.gene07082:CDS |
| TAACCAGAACCAGTCTTCTC+CGG | 0.444988 | 7.2:+6191033 | MS.gene07082:CDS |
| TCAACCACAACTATGAAAAT+GGG | 0.480712 | 7.2:+6191223 | MS.gene07082:CDS |
| AGTATAATCCCGGAGAAGAC+TGG | 0.483617 | 7.2:-6191042 | None:intergenic |
| GGACCTGAGTCCATTGGATC+AGG | 0.493608 | 7.2:+6192280 | MS.gene07082:CDS |
| AACGAGATCGACGTTTGAAA+CGG | 0.497051 | 7.2:-6191086 | None:intergenic |
| AAATTCAAATTCAGTTTCGT+TGG | 0.499228 | 7.2:-6190902 | None:intergenic |
| AGGTGTTAAAGCTGCGATCA+AGG | 0.501612 | 7.2:+6192300 | MS.gene07082:CDS |
| GATGTTGTATCCGTTGAAAA+CGG | 0.506210 | 7.2:+6191154 | MS.gene07082:CDS |
| TTCATAGTTGTGGTTGAGCT+AGG | 0.507201 | 7.2:-6191217 | None:intergenic |
| AACGGTGAGGTCGAATTTCG+TGG | 0.510902 | 7.2:-6191068 | None:intergenic |
| CCTCCGTCAGAGATGAGGTA+AGG | 0.518971 | 7.2:-6191124 | None:intergenic |
| TATGTTGGACCTGAGTCCAT+TGG | 0.522225 | 7.2:+6192274 | MS.gene07082:CDS |
| CGCCCTTACCTCATCTCTGA+CGG | 0.525777 | 7.2:+6191121 | MS.gene07082:CDS |
| AGAAGACTGGTTCTGGTTAG+CGG | 0.534911 | 7.2:-6191029 | None:intergenic |
| AACCAGAACCAGTCTTCTCC+GGG | 0.537520 | 7.2:+6191034 | MS.gene07082:CDS |
| TTCGTGGCGGAGTATAATCC+CGG | 0.541925 | 7.2:-6191052 | None:intergenic |
| GTCGTTTCTCTTAAGCTACA+AGG | 0.546334 | 7.2:+6191178 | MS.gene07082:CDS |
| AATTGCTACCTAGGTGGAGA+AGG | 0.556964 | 7.2:-6192350 | None:intergenic |
| GACTGTGTTGTGGAATATGT+TGG | 0.562518 | 7.2:+6192259 | MS.gene07082:CDS |
| AGCAAGGGAAACAACGGTTG+AGG | 0.563035 | 7.2:+6191318 | MS.gene07082:CDS |
| TGAAGGTGGTGACTGTGTTG+TGG | 0.573198 | 7.2:+6192249 | MS.gene07082:CDS |
| AGCTTTAACACCTGATCCAA+TGG | 0.583998 | 7.2:-6192290 | None:intergenic |
| CTCCGTCAGAGATGAGGTAA+GGG | 0.586257 | 7.2:-6191123 | None:intergenic |
| CGTTTCCTCCGTCAGAGATG+AGG | 0.588496 | 7.2:-6191129 | None:intergenic |
| CAATGTTACCTTCTCCACCT+AGG | 0.589162 | 7.2:+6192342 | MS.gene07082:CDS |
| GGTTAGCGGTAGAGGATGAA+CGG | 0.599940 | 7.2:-6191015 | None:intergenic |
| TGTTTGATGATGATCAAGCA+AGG | 0.620834 | 7.2:+6191302 | MS.gene07082:CDS |
| GTTTGATGATGATCAAGCAA+GGG | 0.625912 | 7.2:+6191303 | MS.gene07082:CDS |
| CCTTACCTCATCTCTGACGG+AGG | 0.627247 | 7.2:+6191124 | MS.gene07082:CDS |
| TCATCTAGAGATACTGAGAC+CGG | 0.630070 | 7.2:+6192186 | MS.gene07082:CDS |
| ACACCTGATCCAATGGACTC+AGG | 0.634250 | 7.2:-6192283 | None:intergenic |
| GAATTGAATTGCTACCTAGG+TGG | 0.663541 | 7.2:-6192356 | None:intergenic |
| TGATCAAGCAAGGGAAACAA+CGG | 0.689446 | 7.2:+6191312 | MS.gene07082:CDS |
| GATCGACGTTTGAAACGGTG+AGG | 0.719915 | 7.2:-6191081 | None:intergenic |
| AGAGGATGAACGGATTACTG+TGG | 0.730832 | 7.2:-6191005 | None:intergenic |
| GGTGAGGTCGAATTTCGTGG+CGG | 0.777998 | 7.2:-6191065 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACTATTATTTATCTTTTA+TGG | + | chr7.2:6191369-6191388 | MS.gene07082:intron | 10.0% |
| !!! | AATGTTTTTATAACCTATAT+TGG | + | chr7.2:6191650-6191669 | MS.gene07082:intron | 15.0% |
| !! | AATAGTAAATGCAAAAAGTA+AGG | - | chr7.2:6191357-6191376 | None:intergenic | 20.0% |
| !! | ATAGTAAATGCAAAAAGTAA+GGG | - | chr7.2:6191356-6191375 | None:intergenic | 20.0% |
| !! | ATATTAGTTAACATCATGAA+AGG | - | chr7.2:6191515-6191534 | None:intergenic | 20.0% |
| !! | TTGGATAAATAACTTATTTG+CGG | + | chr7.2:6191550-6191569 | MS.gene07082:intron | 20.0% |
| !!! | TGATATTGTGAAATTGATTT+TGG | - | chr7.2:6192017-6192036 | None:intergenic | 20.0% |
| ! | AAATTCAAATTCAGTTTCGT+TGG | - | chr7.2:6190905-6190924 | None:intergenic | 25.0% |
| ! | TAGTAAATGCAAAAAGTAAG+GGG | - | chr7.2:6191355-6191374 | None:intergenic | 25.0% |
| ! | TGAAACCAAACATAAACTTA+GGG | - | chr7.2:6191772-6191791 | None:intergenic | 25.0% |
| ! | TGTTAACTAATATAGCAACT+AGG | + | chr7.2:6191522-6191541 | MS.gene07082:intron | 25.0% |
| ! | TTAGAATCAGTGTATGTTAT+TGG | - | chr7.2:6192073-6192092 | None:intergenic | 25.0% |
| !! | ATGAATGTTAGTTGATGTTT+GGG | + | chr7.2:6192138-6192157 | MS.gene07082:intron | 25.0% |
| !! | CTTTTATGGTTGTTAATGAT+TGG | + | chr7.2:6191383-6191402 | MS.gene07082:intron | 25.0% |
| !!! | TTCCTTTTTAAGCTAGAAAT+TGG | + | chr7.2:6191887-6191906 | MS.gene07082:intron | 25.0% |
| AAGGTAACATTGAGAATATC+TGG | - | chr7.2:6192334-6192353 | None:intergenic | 30.0% | |
| AGACCGGCAATTAAAAATTA+CGG | + | chr7.2:6192202-6192221 | MS.gene07082:CDS | 30.0% | |
| CCTATATTGGAGAACTTATA+AGG | + | chr7.2:6191663-6191682 | MS.gene07082:intron | 30.0% | |
| CCTTATAAGTTCTCCAATAT+AGG | - | chr7.2:6191666-6191685 | None:intergenic | 30.0% | |
| GCTTAAAAAGGAATCAATTC+TGG | - | chr7.2:6191880-6191899 | None:intergenic | 30.0% | |
| GTGAAACCAAACATAAACTT+AGG | - | chr7.2:6191773-6191792 | None:intergenic | 30.0% | |
| TAAAAAGGAATCAATTCTGG+AGG | - | chr7.2:6191877-6191896 | None:intergenic | 30.0% | |
| TCAACCACAACTATGAAAAT+GGG | + | chr7.2:6191223-6191242 | MS.gene07082:CDS | 30.0% | |
| ! | GAAGTTCTTGAATTTTGCTT+TGG | - | chr7.2:6190983-6191002 | None:intergenic | 30.0% |
| ! | GATGAATGTTAGTTGATGTT+TGG | + | chr7.2:6192137-6192156 | MS.gene07082:intron | 30.0% |
| ! | TTCGTTGGTATTGAACAAAT+TGG | - | chr7.2:6190890-6190909 | None:intergenic | 30.0% |
| ! | TTTGGTTAAAAGTGAGTTGA+AGG | - | chr7.2:6191999-6192018 | None:intergenic | 30.0% |
| !! | CAAAAGTGATTTTAAAGGTG+TGG | + | chr7.2:6191805-6191824 | MS.gene07082:intron | 30.0% |
| !! | CTCCAATTTCTAGCTTAAAA+AGG | - | chr7.2:6191892-6191911 | None:intergenic | 30.0% |
| !!! | CACACCTTTAAAATCACTTT+TGG | - | chr7.2:6191807-6191826 | None:intergenic | 30.0% |
| !!! | TGAGATTGTGTTGTTTTTGT+TGG | - | chr7.2:6190934-6190953 | None:intergenic | 30.0% |
| ATATAGCAACTAGGTCTGTT+TGG | + | chr7.2:6191531-6191550 | MS.gene07082:intron | 35.0% | |
| CACTTGCACGATATCTTTAA+TGG | - | chr7.2:6191284-6191303 | None:intergenic | 35.0% | |
| CGTGTTCTTAAGGAGAAATT+TGG | + | chr7.2:6191253-6191272 | MS.gene07082:CDS | 35.0% | |
| CTCAACCACAACTATGAAAA+TGG | + | chr7.2:6191222-6191241 | MS.gene07082:CDS | 35.0% | |
| GATGTTGTATCCGTTGAAAA+CGG | + | chr7.2:6191154-6191173 | MS.gene07082:CDS | 35.0% | |
| GTTGAAGGTAAACTGAATGA+TGG | - | chr7.2:6191984-6192003 | None:intergenic | 35.0% | |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | + | chr7.2:6191779-6191798 | MS.gene07082:intron | 35.0% |
| ! | GATTCCCATTTTCATAGTTG+TGG | - | chr7.2:6191230-6191249 | None:intergenic | 35.0% |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | + | chr7.2:6191780-6191799 | MS.gene07082:intron | 35.0% |
| !! | CAAGTTTTATCTGTTGAAGG+TGG | + | chr7.2:6192235-6192254 | MS.gene07082:CDS | 35.0% |
| !! | CCTCCGTAATTTTTAATTGC+CGG | - | chr7.2:6192208-6192227 | None:intergenic | 35.0% |
| !! | GTGCAAGTTTTATCTGTTGA+AGG | + | chr7.2:6192232-6192251 | MS.gene07082:CDS | 35.0% |
| !! | GTTTGATGATGATCAAGCAA+GGG | + | chr7.2:6191303-6191322 | MS.gene07082:CDS | 35.0% |
| !! | TGTTTGATGATGATCAAGCA+AGG | + | chr7.2:6191302-6191321 | MS.gene07082:CDS | 35.0% |
| AACGAGATCGACGTTTGAAA+CGG | - | chr7.2:6191089-6191108 | None:intergenic | 40.0% | |
| AACTTAGGGCCAGTTTGAAT+TGG | - | chr7.2:6191758-6191777 | None:intergenic | 40.0% | |
| ACTGGCCCTAAGTTTATGTT+TGG | + | chr7.2:6191764-6191783 | MS.gene07082:intron | 40.0% | |
| CCGGCAATTAAAAATTACGG+AGG | + | chr7.2:6192205-6192224 | MS.gene07082:CDS | 40.0% | |
| GACTGTGTTGTGGAATATGT+TGG | + | chr7.2:6192259-6192278 | MS.gene07082:CDS | 40.0% | |
| GTCGTTTCTCTTAAGCTACA+AGG | + | chr7.2:6191178-6191197 | MS.gene07082:CDS | 40.0% | |
| TCAGATACGCCAATTCAAAC+TGG | + | chr7.2:6191746-6191765 | MS.gene07082:intron | 40.0% | |
| TCATCTAGAGATACTGAGAC+CGG | + | chr7.2:6192186-6192205 | MS.gene07082:CDS | 40.0% | |
| TGATCAAGCAAGGGAAACAA+CGG | + | chr7.2:6191312-6191331 | MS.gene07082:CDS | 40.0% | |
| TTCATAGTTGTGGTTGAGCT+AGG | - | chr7.2:6191220-6191239 | None:intergenic | 40.0% | |
| ! | AGCTTTAACACCTGATCCAA+TGG | - | chr7.2:6192293-6192312 | None:intergenic | 40.0% |
| ! | GGGGCCAAAAGTGATTTTAA+AGG | + | chr7.2:6191800-6191819 | MS.gene07082:intron | 40.0% |
| ! | GTTAGTTGATGTTTGGGTGT+GGG | + | chr7.2:6192144-6192163 | MS.gene07082:intron | 40.0% |
| ! | GTTTGGTTTCACTTCTAGAG+GGG | + | chr7.2:6191781-6191800 | MS.gene07082:intron | 40.0% |
| ! | TGTTAGTTGATGTTTGGGTG+TGG | + | chr7.2:6192143-6192162 | MS.gene07082:intron | 40.0% |
| !!! | TGTTTGGGTGTGGGTTTTTT+AGG | + | chr7.2:6192153-6192172 | MS.gene07082:intron | 40.0% |
| AGGTGTTAAAGCTGCGATCA+AGG | + | chr7.2:6192300-6192319 | MS.gene07082:CDS | 45.0% | |
| AGTATAATCCCGGAGAAGAC+TGG | - | chr7.2:6191045-6191064 | None:intergenic | 45.0% | |
| GAGCTCATCAATTGGCGTTT+GGG | - | chr7.2:6191728-6191747 | None:intergenic | 45.0% | |
| GCGTATCTGAGCTCATCAAT+TGG | - | chr7.2:6191736-6191755 | None:intergenic | 45.0% | |
| GGGAATCGAACGTGTTCTTA+AGG | + | chr7.2:6191243-6191262 | MS.gene07082:CDS | 45.0% | |
| TAACCAGAACCAGTCTTCTC+CGG | + | chr7.2:6191033-6191052 | MS.gene07082:CDS | 45.0% | |
| TATGTTGGACCTGAGTCCAT+TGG | + | chr7.2:6192274-6192293 | MS.gene07082:CDS | 45.0% | |
| TGAGCTCATCAATTGGCGTT+TGG | - | chr7.2:6191729-6191748 | None:intergenic | 45.0% | |
| !! | AGAAACGACGCCGTTTTCAA+CGG | - | chr7.2:6191167-6191186 | None:intergenic | 45.0% |
| !! | AGAAGACTGGTTCTGGTTAG+CGG | - | chr7.2:6191032-6191051 | None:intergenic | 45.0% |
| !! | AGAGGATGAACGGATTACTG+TGG | - | chr7.2:6191008-6191027 | None:intergenic | 45.0% |
| !!! | TTGGGTGTGGGTTTTTTAGG+CGG | + | chr7.2:6192156-6192175 | MS.gene07082:intron | 45.0% |
| AACCAGAACCAGTCTTCTCC+GGG | + | chr7.2:6191034-6191053 | MS.gene07082:CDS | 50.0% | |
| AACGGTGAGGTCGAATTTCG+TGG | - | chr7.2:6191071-6191090 | None:intergenic | 50.0% | |
| AGCAAGGGAAACAACGGTTG+AGG | + | chr7.2:6191318-6191337 | MS.gene07082:CDS | 50.0% | |
| CTCCGTCAGAGATGAGGTAA+GGG | - | chr7.2:6191126-6191145 | None:intergenic | 50.0% | |
| GGTTAGCGGTAGAGGATGAA+CGG | - | chr7.2:6191018-6191037 | None:intergenic | 50.0% | |
| TGAAGGTGGTGACTGTGTTG+TGG | + | chr7.2:6192249-6192268 | MS.gene07082:CDS | 50.0% | |
| ! | ACACCTGATCCAATGGACTC+AGG | - | chr7.2:6192286-6192305 | None:intergenic | 50.0% |
| ! | GATCGACGTTTGAAACGGTG+AGG | - | chr7.2:6191084-6191103 | None:intergenic | 50.0% |
| ! | TTCGTGGCGGAGTATAATCC+CGG | - | chr7.2:6191055-6191074 | None:intergenic | 50.0% |
| CCTCCGTCAGAGATGAGGTA+AGG | - | chr7.2:6191127-6191146 | None:intergenic | 55.0% | |
| CCTTACCTCATCTCTGACGG+AGG | + | chr7.2:6191124-6191143 | MS.gene07082:CDS | 55.0% | |
| CGCCCTTACCTCATCTCTGA+CGG | + | chr7.2:6191121-6191140 | MS.gene07082:CDS | 55.0% | |
| CGTTTCCTCCGTCAGAGATG+AGG | - | chr7.2:6191132-6191151 | None:intergenic | 55.0% | |
| GGACCTGAGTCCATTGGATC+AGG | + | chr7.2:6192280-6192299 | MS.gene07082:CDS | 55.0% | |
| GGTGAGGTCGAATTTCGTGG+CGG | - | chr7.2:6191068-6191087 | None:intergenic | 55.0% | |
| ! | ATCCCGGAGAAGACTGGTTC+TGG | - | chr7.2:6191039-6191058 | None:intergenic | 55.0% |
| !! | CTGGTTCTGGTTAGCGGTAG+AGG | - | chr7.2:6191026-6191045 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6190872 | 6192363 | 6190872 | ID=MS.gene07082 |
| chr7.2 | mRNA | 6190872 | 6192363 | 6190872 | ID=MS.gene07082.t1;Parent=MS.gene07082 |
| chr7.2 | exon | 6190872 | 6191339 | 6190872 | ID=MS.gene07082.t1.exon1;Parent=MS.gene07082.t1 |
| chr7.2 | CDS | 6190872 | 6191339 | 6190872 | ID=cds.MS.gene07082.t1;Parent=MS.gene07082.t1 |
| chr7.2 | exon | 6192175 | 6192363 | 6192175 | ID=MS.gene07082.t1.exon2;Parent=MS.gene07082.t1 |
| chr7.2 | CDS | 6192175 | 6192363 | 6192175 | ID=cds.MS.gene07082.t1;Parent=MS.gene07082.t1 |
| Gene Sequence |
| Protein sequence |
