Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78818.t1 | RHN59148.1 | 85.5 | 448 | 58 | 3 | 1 | 446 | 40 | 482 | 1.50E-217 | 765.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78818.t1 | Q9FH97 | 37.5 | 424 | 231 | 10 | 27 | 440 | 25 | 424 | 3.8e-68 | 260.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78818.t1 | G7JUI6 | 85.5 | 448 | 58 | 3 | 1 | 446 | 1 | 443 | 1.1e-217 | 765.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054277 | MS.gene78818 | 0.834271 | 3.30E-56 | -1.69E-46 |
MS.gene054742 | MS.gene78818 | 0.800039 | 1.74E-48 | -1.69E-46 |
MS.gene056715 | MS.gene78818 | 0.806228 | 9.11E-50 | -1.69E-46 |
MS.gene057261 | MS.gene78818 | 0.805569 | 1.25E-49 | -1.69E-46 |
MS.gene058381 | MS.gene78818 | 0.801015 | 1.10E-48 | -1.69E-46 |
MS.gene059955 | MS.gene78818 | 0.811997 | 5.29E-51 | -1.69E-46 |
MS.gene061092 | MS.gene78818 | 0.814936 | 1.19E-51 | -1.69E-46 |
MS.gene061094 | MS.gene78818 | 0.806775 | 6.98E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78818.t1 | MTR_4g022290 | 87.277 | 448 | 50 | 3 | 1 | 446 | 1 | 443 | 0.0 | 788 |
MS.gene78818.t1 | MTR_4g094828 | 81.798 | 456 | 63 | 5 | 1 | 445 | 1 | 447 | 0.0 | 753 |
MS.gene78818.t1 | MTR_8g079710 | 75.442 | 452 | 96 | 9 | 1 | 446 | 1 | 443 | 0.0 | 664 |
MS.gene78818.t1 | MTR_4g094835 | 54.945 | 455 | 181 | 11 | 1 | 444 | 1 | 442 | 1.94e-169 | 484 |
MS.gene78818.t1 | MTR_4g094842 | 53.261 | 460 | 177 | 9 | 1 | 441 | 1 | 441 | 1.44e-161 | 464 |
MS.gene78818.t1 | MTR_0190s0020 | 50.000 | 456 | 200 | 8 | 1 | 445 | 1 | 439 | 6.76e-152 | 439 |
MS.gene78818.t1 | MTR_4g094838 | 51.556 | 450 | 179 | 10 | 4 | 440 | 1 | 424 | 1.78e-148 | 430 |
MS.gene78818.t1 | MTR_4g022800 | 50.538 | 465 | 184 | 11 | 1 | 445 | 1 | 439 | 2.41e-148 | 430 |
MS.gene78818.t1 | MTR_3g026310 | 49.895 | 477 | 185 | 13 | 1 | 451 | 1 | 449 | 1.65e-147 | 428 |
MS.gene78818.t1 | MTR_4g022720 | 50.655 | 458 | 187 | 11 | 1 | 445 | 1 | 432 | 1.26e-146 | 426 |
MS.gene78818.t1 | MTR_4g022825 | 50.324 | 463 | 186 | 12 | 1 | 445 | 1 | 437 | 2.32e-146 | 425 |
MS.gene78818.t1 | MTR_4g022670 | 49.569 | 464 | 189 | 11 | 1 | 445 | 1 | 438 | 8.79e-146 | 424 |
MS.gene78818.t1 | MTR_8g041770 | 50.219 | 456 | 198 | 11 | 1 | 445 | 1 | 438 | 2.44e-145 | 422 |
MS.gene78818.t1 | MTR_3g088420 | 49.891 | 459 | 187 | 12 | 1 | 445 | 1 | 430 | 8.13e-145 | 421 |
MS.gene78818.t1 | MTR_7g026860 | 49.676 | 463 | 187 | 11 | 1 | 445 | 1 | 435 | 4.04e-144 | 419 |
MS.gene78818.t1 | MTR_4g094832 | 56.316 | 380 | 138 | 9 | 75 | 440 | 57 | 422 | 1.61e-138 | 404 |
MS.gene78818.t1 | MTR_4g022760 | 44.708 | 463 | 169 | 10 | 1 | 445 | 1 | 394 | 1.09e-120 | 358 |
MS.gene78818.t1 | MTR_6g016815 | 40.749 | 454 | 172 | 10 | 1 | 446 | 15 | 379 | 1.84e-99 | 303 |
MS.gene78818.t1 | MTR_3g101930 | 36.444 | 450 | 237 | 13 | 27 | 450 | 26 | 452 | 1.92e-80 | 256 |
MS.gene78818.t1 | MTR_3g101900 | 35.991 | 439 | 241 | 13 | 30 | 450 | 29 | 445 | 1.72e-78 | 251 |
MS.gene78818.t1 | MTR_3g101960 | 36.758 | 438 | 237 | 13 | 25 | 440 | 23 | 442 | 2.83e-78 | 251 |
MS.gene78818.t1 | MTR_3g101970 | 37.176 | 425 | 218 | 14 | 25 | 429 | 23 | 418 | 3.79e-78 | 250 |
MS.gene78818.t1 | MTR_3g102010 | 36.161 | 448 | 248 | 13 | 27 | 453 | 26 | 456 | 4.96e-78 | 250 |
MS.gene78818.t1 | MTR_3g102020 | 36.547 | 446 | 242 | 14 | 25 | 447 | 23 | 450 | 7.94e-78 | 249 |
MS.gene78818.t1 | MTR_8g040760 | 53.425 | 219 | 90 | 4 | 1 | 212 | 1 | 214 | 3.36e-72 | 227 |
MS.gene78818.t1 | MTR_5g081960 | 32.640 | 481 | 247 | 15 | 29 | 452 | 25 | 485 | 1.48e-63 | 213 |
MS.gene78818.t1 | MTR_4g094825 | 56.989 | 186 | 72 | 5 | 24 | 202 | 85 | 269 | 2.33e-62 | 207 |
MS.gene78818.t1 | MTR_4g094825 | 50.000 | 146 | 59 | 4 | 296 | 440 | 251 | 383 | 1.01e-35 | 136 |
MS.gene78818.t1 | MTR_4g015180 | 33.263 | 475 | 244 | 16 | 24 | 440 | 20 | 479 | 5.94e-61 | 206 |
MS.gene78818.t1 | MTR_7g026850 | 62.179 | 156 | 56 | 3 | 30 | 184 | 7 | 160 | 1.10e-60 | 196 |
MS.gene78818.t1 | MTR_3g070170 | 31.209 | 455 | 263 | 12 | 21 | 440 | 23 | 462 | 3.75e-59 | 201 |
MS.gene78818.t1 | MTR_8g040780 | 41.949 | 236 | 119 | 5 | 209 | 441 | 5 | 225 | 9.70e-50 | 170 |
MS.gene78818.t1 | MTR_6g034495 | 66.102 | 118 | 38 | 1 | 72 | 187 | 45 | 162 | 4.21e-47 | 160 |
MS.gene78818.t1 | MTR_3g102030 | 32.267 | 344 | 179 | 13 | 72 | 401 | 17 | 320 | 5.04e-43 | 154 |
MS.gene78818.t1 | MTR_6g045553 | 28.664 | 464 | 267 | 15 | 27 | 449 | 31 | 471 | 3.05e-37 | 142 |
MS.gene78818.t1 | MTR_7g026770 | 43.478 | 184 | 78 | 4 | 148 | 331 | 132 | 289 | 4.76e-36 | 135 |
MS.gene78818.t1 | MTR_7g026830 | 70.732 | 82 | 24 | 0 | 91 | 172 | 16 | 97 | 6.29e-35 | 125 |
MS.gene78818.t1 | MTR_6g034485 | 41.727 | 139 | 63 | 3 | 191 | 325 | 1 | 125 | 2.80e-27 | 106 |
MS.gene78818.t1 | MTR_8g075610 | 26.196 | 397 | 243 | 15 | 61 | 437 | 47 | 413 | 1.85e-26 | 111 |
MS.gene78818.t1 | MTR_2g105330 | 25.845 | 414 | 252 | 17 | 48 | 435 | 39 | 423 | 2.12e-24 | 105 |
MS.gene78818.t1 | MTR_2g064495 | 25.845 | 414 | 252 | 17 | 48 | 435 | 39 | 423 | 2.56e-24 | 105 |
MS.gene78818.t1 | MTR_4g007540 | 25.000 | 416 | 262 | 15 | 48 | 439 | 39 | 428 | 2.36e-23 | 102 |
MS.gene78818.t1 | MTR_3g026950 | 24.886 | 438 | 260 | 19 | 37 | 433 | 28 | 437 | 1.02e-21 | 97.8 |
MS.gene78818.t1 | MTR_5g026320 | 25.257 | 487 | 277 | 22 | 3 | 449 | 17 | 456 | 1.37e-21 | 97.4 |
MS.gene78818.t1 | MTR_4g097090 | 24.161 | 447 | 255 | 20 | 31 | 429 | 30 | 440 | 4.24e-21 | 95.9 |
MS.gene78818.t1 | MTR_8g096530 | 25.779 | 353 | 216 | 13 | 61 | 396 | 59 | 382 | 2.91e-20 | 93.2 |
MS.gene78818.t1 | MTR_3g049150 | 24.299 | 428 | 250 | 16 | 48 | 433 | 38 | 433 | 5.82e-20 | 92.4 |
MS.gene78818.t1 | MTR_7g027175 | 23.529 | 391 | 274 | 11 | 51 | 435 | 58 | 429 | 1.13e-19 | 91.3 |
MS.gene78818.t1 | MTR_7g085930 | 25.721 | 416 | 253 | 15 | 51 | 427 | 49 | 447 | 2.57e-19 | 90.5 |
MS.gene78818.t1 | MTR_7g014200 | 25.054 | 459 | 264 | 18 | 29 | 435 | 28 | 458 | 9.71e-19 | 89.0 |
MS.gene78818.t1 | MTR_6g015815 | 23.799 | 458 | 259 | 17 | 31 | 437 | 34 | 452 | 6.95e-18 | 86.3 |
MS.gene78818.t1 | MTR_3g098980 | 23.876 | 356 | 222 | 12 | 61 | 398 | 66 | 390 | 1.06e-17 | 85.5 |
MS.gene78818.t1 | MTR_7g014330 | 25.369 | 406 | 249 | 14 | 31 | 400 | 26 | 413 | 1.37e-17 | 85.1 |
MS.gene78818.t1 | MTR_8g012750 | 25.537 | 419 | 243 | 17 | 28 | 396 | 23 | 422 | 2.36e-17 | 84.7 |
MS.gene78818.t1 | MTR_7g014250 | 25.061 | 411 | 236 | 16 | 35 | 400 | 30 | 413 | 4.28e-17 | 83.6 |
MS.gene78818.t1 | MTR_1g040175 | 24.390 | 369 | 245 | 14 | 36 | 397 | 46 | 387 | 8.20e-17 | 82.8 |
MS.gene78818.t1 | MTR_4g013050 | 23.114 | 411 | 229 | 16 | 59 | 439 | 51 | 404 | 8.73e-17 | 82.4 |
MS.gene78818.t1 | MTR_6g015320 | 24.433 | 397 | 256 | 15 | 31 | 399 | 29 | 409 | 9.27e-17 | 82.8 |
MS.gene78818.t1 | MTR_7g014160 | 24.390 | 451 | 264 | 17 | 31 | 429 | 30 | 455 | 9.71e-17 | 82.8 |
MS.gene78818.t1 | MTR_7g086000 | 25.400 | 437 | 242 | 20 | 61 | 447 | 60 | 462 | 9.75e-17 | 82.8 |
MS.gene78818.t1 | MTR_7g085990 | 25.659 | 417 | 250 | 18 | 51 | 426 | 45 | 442 | 1.44e-16 | 82.0 |
MS.gene78818.t1 | MTR_7g014230 | 25.485 | 412 | 241 | 16 | 31 | 400 | 28 | 415 | 1.71e-16 | 82.0 |
MS.gene78818.t1 | MTR_3g028210 | 24.091 | 440 | 273 | 15 | 31 | 430 | 31 | 449 | 2.52e-16 | 81.3 |
MS.gene78818.t1 | MTR_7g084940 | 28.090 | 356 | 208 | 16 | 59 | 396 | 67 | 392 | 2.85e-16 | 81.3 |
MS.gene78818.t1 | MTR_6g015830 | 24.466 | 421 | 227 | 16 | 31 | 399 | 34 | 415 | 2.91e-16 | 81.3 |
MS.gene78818.t1 | MTR_7g014620 | 22.989 | 435 | 264 | 14 | 31 | 429 | 15 | 414 | 2.51e-15 | 78.2 |
MS.gene78818.t1 | MTR_3g071320 | 24.750 | 400 | 240 | 15 | 28 | 397 | 23 | 391 | 4.14e-15 | 77.4 |
MS.gene78818.t1 | MTR_7g014610 | 22.961 | 466 | 271 | 20 | 34 | 439 | 32 | 469 | 4.28e-15 | 77.8 |
MS.gene78818.t1 | MTR_1g081660 | 24.096 | 415 | 230 | 18 | 31 | 404 | 31 | 401 | 5.32e-15 | 77.4 |
MS.gene78818.t1 | MTR_3g087640 | 24.222 | 450 | 273 | 17 | 36 | 435 | 31 | 462 | 6.80e-15 | 77.0 |
MS.gene78818.t1 | MTR_3g086020 | 27.273 | 418 | 243 | 21 | 30 | 429 | 22 | 396 | 8.83e-15 | 76.3 |
MS.gene78818.t1 | MTR_8g079970 | 24.368 | 435 | 257 | 17 | 3 | 408 | 2 | 393 | 9.34e-15 | 76.3 |
MS.gene78818.t1 | MTR_5g084870 | 24.887 | 442 | 263 | 19 | 3 | 421 | 2 | 397 | 1.17e-14 | 76.3 |
MS.gene78818.t1 | MTR_7g114470 | 23.235 | 439 | 263 | 21 | 32 | 430 | 25 | 429 | 1.21e-14 | 76.3 |
MS.gene78818.t1 | MTR_5g090880 | 24.737 | 380 | 211 | 16 | 61 | 397 | 67 | 414 | 3.33e-14 | 74.7 |
MS.gene78818.t1 | MTR_3g112180 | 24.882 | 422 | 263 | 18 | 35 | 435 | 38 | 426 | 4.06e-14 | 74.7 |
MS.gene78818.t1 | MTR_2g089755 | 25.424 | 413 | 247 | 18 | 31 | 399 | 37 | 432 | 1.04e-13 | 73.6 |
MS.gene78818.t1 | MTR_8g079980 | 23.333 | 390 | 238 | 14 | 54 | 421 | 52 | 402 | 2.71e-13 | 72.0 |
MS.gene78818.t1 | MTR_7g026780 | 38.739 | 111 | 39 | 5 | 336 | 445 | 26 | 108 | 2.57e-12 | 63.9 |
MS.gene78818.t1 | MTR_2g089650 | 23.485 | 396 | 244 | 16 | 45 | 399 | 43 | 420 | 2.60e-11 | 65.9 |
MS.gene78818.t1 | MTR_7g084910 | 25.641 | 273 | 162 | 9 | 59 | 312 | 68 | 318 | 4.41e-11 | 65.1 |
MS.gene78818.t1 | MTR_4g055170 | 25.606 | 289 | 185 | 10 | 61 | 336 | 69 | 340 | 9.17e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78818.t1 | AT5G67150 | 38.411 | 453 | 246 | 12 | 3 | 440 | 4 | 438 | 1.96e-96 | 298 |
MS.gene78818.t1 | AT3G50300 | 38.675 | 468 | 242 | 15 | 1 | 446 | 1 | 445 | 2.45e-90 | 282 |
MS.gene78818.t1 | AT5G67160 | 37.736 | 424 | 230 | 10 | 27 | 440 | 25 | 424 | 7.14e-86 | 270 |
MS.gene78818.t1 | AT3G50270 | 36.283 | 452 | 256 | 10 | 4 | 440 | 6 | 440 | 9.48e-86 | 270 |
MS.gene78818.t1 | AT3G50280 | 35.635 | 449 | 254 | 11 | 1 | 434 | 1 | 429 | 3.53e-82 | 261 |
MS.gene78818.t1 | AT5G38130 | 37.273 | 440 | 247 | 12 | 1 | 429 | 21 | 442 | 6.57e-82 | 260 |
MS.gene78818.t1 | AT5G42830 | 35.581 | 430 | 241 | 13 | 30 | 440 | 29 | 441 | 3.38e-75 | 243 |
MS.gene78818.t1 | AT5G07850 | 35.648 | 432 | 241 | 11 | 30 | 440 | 30 | 445 | 2.03e-73 | 238 |
MS.gene78818.t1 | AT5G07860 | 35.499 | 431 | 239 | 10 | 30 | 440 | 30 | 441 | 7.81e-72 | 234 |
MS.gene78818.t1 | AT5G01210 | 33.626 | 455 | 259 | 12 | 24 | 444 | 20 | 465 | 1.09e-65 | 219 |
MS.gene78818.t1 | AT5G07870 | 34.889 | 450 | 244 | 14 | 30 | 447 | 30 | 462 | 1.35e-65 | 218 |
MS.gene78818.t1 | AT2G39980 | 32.143 | 476 | 265 | 12 | 11 | 440 | 9 | 472 | 2.31e-65 | 218 |
MS.gene78818.t1 | AT3G50280 | 36.102 | 313 | 176 | 7 | 132 | 434 | 1 | 299 | 6.93e-55 | 186 |
MS.gene78818.t1 | AT3G50290 | 39.716 | 282 | 144 | 7 | 126 | 394 | 1 | 269 | 3.19e-51 | 174 |
MS.gene78818.t1 | AT5G23940 | 31.066 | 441 | 254 | 13 | 27 | 437 | 21 | 441 | 5.73e-46 | 166 |
MS.gene78818.t1 | AT5G41040 | 28.165 | 387 | 239 | 15 | 58 | 430 | 66 | 427 | 6.71e-26 | 109 |
MS.gene78818.t1 | AT5G41040 | 28.165 | 387 | 239 | 15 | 58 | 430 | 82 | 443 | 8.75e-26 | 109 |
MS.gene78818.t1 | AT3G48720 | 27.119 | 413 | 248 | 18 | 46 | 436 | 42 | 423 | 1.15e-22 | 100 |
MS.gene78818.t1 | AT5G63560 | 25.450 | 389 | 235 | 14 | 61 | 430 | 61 | 413 | 4.59e-21 | 95.5 |
MS.gene78818.t1 | AT2G19070 | 25.855 | 468 | 263 | 20 | 23 | 437 | 7 | 443 | 2.66e-20 | 93.6 |
MS.gene78818.t1 | AT3G29590 | 23.982 | 442 | 276 | 16 | 31 | 439 | 28 | 442 | 3.69e-20 | 93.2 |
MS.gene78818.t1 | AT5G57840 | 26.392 | 413 | 244 | 18 | 48 | 429 | 39 | 422 | 1.13e-18 | 88.6 |
MS.gene78818.t1 | AT1G24430 | 25.789 | 380 | 229 | 16 | 48 | 409 | 44 | 388 | 1.05e-16 | 82.4 |
MS.gene78818.t1 | AT3G29670 | 22.881 | 472 | 317 | 16 | 4 | 453 | 3 | 449 | 1.21e-16 | 82.4 |
MS.gene78818.t1 | AT1G78990 | 26.005 | 373 | 219 | 16 | 50 | 397 | 56 | 396 | 3.76e-16 | 80.9 |
MS.gene78818.t1 | AT3G26040 | 27.816 | 435 | 235 | 21 | 30 | 429 | 20 | 410 | 6.40e-16 | 80.1 |
MS.gene78818.t1 | AT3G29635 | 24.598 | 435 | 273 | 17 | 28 | 429 | 26 | 438 | 7.41e-16 | 80.1 |
MS.gene78818.t1 | AT5G07080 | 24.500 | 400 | 245 | 16 | 61 | 434 | 70 | 438 | 2.15e-15 | 78.6 |
MS.gene78818.t1 | AT5G39080 | 23.341 | 437 | 275 | 16 | 1 | 399 | 2 | 416 | 4.98e-15 | 77.4 |
MS.gene78818.t1 | AT5G47950 | 24.745 | 392 | 236 | 14 | 56 | 432 | 56 | 403 | 6.46e-14 | 73.9 |
MS.gene78818.t1 | AT5G23970 | 23.058 | 412 | 243 | 15 | 47 | 430 | 38 | 403 | 1.26e-13 | 72.8 |
MS.gene78818.t1 | AT5G61160 | 24.029 | 412 | 241 | 19 | 28 | 397 | 22 | 403 | 1.74e-13 | 72.8 |
MS.gene78818.t1 | AT3G03480 | 24.208 | 442 | 262 | 20 | 32 | 435 | 33 | 439 | 1.84e-13 | 72.4 |
MS.gene78818.t1 | AT3G30280 | 23.907 | 389 | 247 | 16 | 60 | 430 | 61 | 418 | 2.43e-13 | 72.0 |
MS.gene78818.t1 | AT1G31490 | 24.586 | 362 | 215 | 15 | 58 | 397 | 59 | 384 | 2.39e-12 | 68.9 |
MS.gene78818.t1 | AT5G39050 | 25.526 | 333 | 200 | 12 | 124 | 427 | 134 | 447 | 3.26e-12 | 68.9 |
MS.gene78818.t1 | AT1G24420 | 25.000 | 340 | 209 | 12 | 72 | 399 | 76 | 381 | 6.11e-12 | 67.8 |
MS.gene78818.t1 | AT1G24420 | 25.000 | 340 | 209 | 12 | 72 | 399 | 76 | 381 | 6.11e-12 | 67.8 |
MS.gene78818.t1 | AT1G27620 | 23.238 | 383 | 269 | 12 | 61 | 437 | 58 | 421 | 3.78e-11 | 65.5 |
MS.gene78818.t1 | AT5G39090 | 22.637 | 402 | 247 | 14 | 31 | 397 | 28 | 400 | 6.59e-11 | 64.7 |
Find 93 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGTTAGAAGAGAATTATTT+TGG | 0.198109 | 4.2:+80644713 | MS.gene78818:CDS |
TTGTCTTCCTTATGATATTT+TGG | 0.223517 | 4.2:+80645084 | MS.gene78818:CDS |
ATGGTCTATTTGGTTTGTTT+TGG | 0.227446 | 4.2:-80643961 | None:intergenic |
CATTCTTGTCCTACAATCTA+TGG | 0.234125 | 4.2:-80644684 | None:intergenic |
GGATCTCAAATTTCTCAAAT+TGG | 0.239669 | 4.2:+80643905 | MS.gene78818:CDS |
CTACCTGGCTCCGATATAAA+TGG | 0.244929 | 4.2:-80644890 | None:intergenic |
GGATATGTAATAATGCAAAA+AGG | 0.251454 | 4.2:+80644755 | MS.gene78818:CDS |
AGTTTCATCAATAATGCTAT+TGG | 0.259414 | 4.2:+80645142 | MS.gene78818:CDS |
TTTGTTTAAGATGGTCTATT+TGG | 0.294119 | 4.2:-80643971 | None:intergenic |
ATGGGAAGGTTAACATTGTT+TGG | 0.299003 | 4.2:-80644398 | None:intergenic |
TATGGAAAAGAAGACCTCTT+TGG | 0.321294 | 4.2:-80643935 | None:intergenic |
GTTGGACTTCAAAGAAATAT+TGG | 0.326500 | 4.2:+80645010 | MS.gene78818:CDS |
GTTGAAAACCCCATTTATAT+CGG | 0.333565 | 4.2:+80644880 | MS.gene78818:CDS |
CATCACCATGATTTGTTGCT+TGG | 0.340899 | 4.2:-80643839 | None:intergenic |
AAATAATTCTCTTCTAACTT+TGG | 0.349532 | 4.2:-80644710 | None:intergenic |
GTGTAGACGGCAAGTCATTT+TGG | 0.349934 | 4.2:+80644303 | MS.gene78818:CDS |
ATGGAAAAGAAGACCTCTTT+GGG | 0.360598 | 4.2:-80643934 | None:intergenic |
ACGAATGCAGACCTTTCTTC+TGG | 0.360777 | 4.2:-80644656 | None:intergenic |
TTTGGCATTTCATCAACTCT+TGG | 0.368556 | 4.2:+80644321 | MS.gene78818:CDS |
TTACGGTAATGACTTTGGTT+GGG | 0.373170 | 4.2:+80644961 | MS.gene78818:CDS |
TTGGCATTTCATCAACTCTT+GGG | 0.376104 | 4.2:+80644322 | MS.gene78818:CDS |
ATGGAACATGAGGCGTTGTT+AGG | 0.379377 | 4.2:-80644062 | None:intergenic |
AGCCTATTGCAGTTAGAAAT+GGG | 0.388093 | 4.2:+80644987 | MS.gene78818:CDS |
CTTTGTGAAAGGAAACAGTA+TGG | 0.391214 | 4.2:-80644417 | None:intergenic |
ACCCCATTTCTAACTGCAAT+AGG | 0.394232 | 4.2:-80644989 | None:intergenic |
TCGTCTTACCCATAGATTGT+AGG | 0.400779 | 4.2:+80644675 | MS.gene78818:CDS |
AAGCCTATTGCAGTTAGAAA+TGG | 0.401535 | 4.2:+80644986 | MS.gene78818:CDS |
AACTATTACGGTAATGACTT+TGG | 0.405935 | 4.2:+80644956 | MS.gene78818:CDS |
TTAATCGACGGTATCTTCAT+TGG | 0.408333 | 4.2:+80644260 | MS.gene78818:CDS |
AGGAAAGTGTTTGTTTAAGA+TGG | 0.419599 | 4.2:-80643980 | None:intergenic |
TCACCACGGTTCAACTATTA+CGG | 0.422782 | 4.2:+80644944 | MS.gene78818:CDS |
GGGAGTGGAATCGGAGCAAC+TGG | 0.428061 | 4.2:+80644734 | MS.gene78818:CDS |
TACCTGGCTCCGATATAAAT+GGG | 0.437060 | 4.2:-80644889 | None:intergenic |
AAATTGTTCATTTATCTCCA+TGG | 0.445544 | 4.2:+80643883 | MS.gene78818:CDS |
ATTACGGTAATGACTTTGGT+TGG | 0.447960 | 4.2:+80644960 | MS.gene78818:CDS |
TACGGTAATGACTTTGGTTG+GGG | 0.461686 | 4.2:+80644962 | MS.gene78818:CDS |
ATAGCCTCCAAAATATCATA+AGG | 0.481866 | 4.2:-80645091 | None:intergenic |
AATTGTTCATTTATCTCCAT+GGG | 0.481963 | 4.2:+80643884 | MS.gene78818:CDS |
GAATTAATGGAAAGTGGTAT+TGG | 0.488797 | 4.2:+80644779 | MS.gene78818:CDS |
GGAAACCAACGTTCGAAAGA+AGG | 0.490929 | 4.2:-80644377 | None:intergenic |
ACAATCCAAGCAACAAATCA+TGG | 0.492574 | 4.2:+80643834 | MS.gene78818:CDS |
TAAGAATAATGAAGAAACAA+TGG | 0.493631 | 4.2:-80644174 | None:intergenic |
ACAATGGGAGGAACATACTT+TGG | 0.495798 | 4.2:-80644158 | None:intergenic |
AAGAATAATGAAGAAACAAT+GGG | 0.496513 | 4.2:-80644173 | None:intergenic |
TTGAGAAATTTGAGATCCCA+TGG | 0.499411 | 4.2:-80643900 | None:intergenic |
TGGTATTGGTAAAATTGCTA+TGG | 0.503229 | 4.2:+80644793 | MS.gene78818:CDS |
ACCAGCGTTGTTACAAATGA+TGG | 0.505482 | 4.2:-80644081 | None:intergenic |
GGTAGAGTTATTGTGCTTGG+TGG | 0.507052 | 4.2:+80645031 | MS.gene78818:CDS |
GAATTTGTTCCTTTGTAAAG+TGG | 0.513443 | 4.2:-80644484 | None:intergenic |
AACTTCTTTCCACCACTCGC+TGG | 0.516081 | 4.2:+80644011 | MS.gene78818:CDS |
AACTAGAATCCATGGACATA+GGG | 0.518441 | 4.2:-80645123 | None:intergenic |
CATACTGTTTCCTTTCACAA+AGG | 0.523300 | 4.2:+80644418 | MS.gene78818:CDS |
AAAGGGGAATTAATGGAAAG+TGG | 0.523850 | 4.2:+80644773 | MS.gene78818:CDS |
TAATGAGTGATATTGAATCT+TGG | 0.525795 | 4.2:+80644858 | MS.gene78818:CDS |
TACTTATAATTAAACGCCAA+AGG | 0.529613 | 4.2:-80644619 | None:intergenic |
ATTGGTAGAGTTATTGTGCT+TGG | 0.531528 | 4.2:+80645028 | MS.gene78818:CDS |
AAACTAGAATCCATGGACAT+AGG | 0.534361 | 4.2:-80645124 | None:intergenic |
AAAATCTTAAACCAGAAGAA+AGG | 0.538946 | 4.2:+80644645 | MS.gene78818:CDS |
ACCCCATTTATATCGGAGCC+AGG | 0.547815 | 4.2:+80644887 | MS.gene78818:CDS |
ATTGATGAAACTAGAATCCA+TGG | 0.549335 | 4.2:-80645131 | None:intergenic |
AGATTACTTGATGATCTACC+TGG | 0.550288 | 4.2:-80644905 | None:intergenic |
AGGAAACGACCCTATGTCCA+TGG | 0.554536 | 4.2:+80645114 | MS.gene78818:CDS |
ATCAAAATCTCATCATGAGA+AGG | 0.558207 | 4.2:+80644835 | MS.gene78818:CDS |
TGGTTGAAGTATGTCGGCAA+TGG | 0.566982 | 4.2:-80644138 | None:intergenic |
ATTGCAGTTAGAAATGGGGT+TGG | 0.568648 | 4.2:+80644992 | MS.gene78818:CDS |
ATACTTTGGTTGAAGTATGT+CGG | 0.572459 | 4.2:-80644144 | None:intergenic |
AAAAGAAGACCTCTTTGGGT+TGG | 0.572933 | 4.2:-80643930 | None:intergenic |
CAAGCAACAAATCATGGTGA+TGG | 0.574475 | 4.2:+80643840 | MS.gene78818:CDS |
GTGCTTGGTGGTGCAGAAGA+AGG | 0.576706 | 4.2:+80645043 | MS.gene78818:CDS |
ATTCTTGTCCTACAATCTAT+GGG | 0.578627 | 4.2:-80644683 | None:intergenic |
TGAAAGGAAACAGTATGGGA+AGG | 0.580780 | 4.2:-80644412 | None:intergenic |
TGGTGGAAAGAAGTTAAGTG+TGG | 0.592664 | 4.2:-80644003 | None:intergenic |
GTTACTTGTACTGCAAGTAG+TGG | 0.602193 | 4.2:-80644233 | None:intergenic |
TCGAATCTTCCACTTTACAA+AGG | 0.603894 | 4.2:+80644475 | MS.gene78818:CDS |
AAGTACCTTCTTTCGAACGT+TGG | 0.604822 | 4.2:+80644372 | MS.gene78818:CDS |
TTTGTGAAAGGAAACAGTAT+GGG | 0.604933 | 4.2:-80644416 | None:intergenic |
ATTAACCATGTGTGTGTAGA+CGG | 0.608212 | 4.2:+80644290 | MS.gene78818:CDS |
GCCTATTGCAGTTAGAAATG+GGG | 0.609427 | 4.2:+80644988 | MS.gene78818:CDS |
TCCATCATTTGTAACAACGC+TGG | 0.618527 | 4.2:+80644080 | MS.gene78818:CDS |
ACAAATCATGGTGATGGTGA+TGG | 0.619825 | 4.2:+80643846 | MS.gene78818:CDS |
ACAAGACGACCAGCGAGTGG+TGG | 0.630223 | 4.2:-80644020 | None:intergenic |
GTTACAAATGATGGAACATG+AGG | 0.636643 | 4.2:-80644072 | None:intergenic |
AATTGCTATGGAAATGAACA+AGG | 0.638167 | 4.2:+80644805 | MS.gene78818:CDS |
AAATTGGCACCAACCCAAAG+AGG | 0.639346 | 4.2:+80643921 | MS.gene78818:CDS |
ACCTGGCTCCGATATAAATG+GGG | 0.662922 | 4.2:-80644888 | None:intergenic |
TGGAAAGAAGTTAAGTGTGG+AGG | 0.665000 | 4.2:-80644000 | None:intergenic |
CAAGTAACAGAGTTAATCGA+CGG | 0.676652 | 4.2:+80644248 | MS.gene78818:CDS |
AACGATGTGAAAAGCTACGA+AGG | 0.679578 | 4.2:+80644200 | MS.gene78818:CDS |
AATAATGAAGAAACAATGGG+AGG | 0.681867 | 4.2:-80644170 | None:intergenic |
ACTTGCCGTCTACACACACA+TGG | 0.683354 | 4.2:-80644295 | None:intergenic |
ATTACAAGACGACCAGCGAG+TGG | 0.695572 | 4.2:-80644023 | None:intergenic |
TGATAGCAAGCAGTTCACCA+CGG | 0.696229 | 4.2:+80644930 | MS.gene78818:CDS |
TTACCGTAATAGTTGAACCG+TGG | 0.734430 | 4.2:-80644947 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTCTCTTCTAACTT+TGG | - | chr4.2:80644713-80644732 | None:intergenic | 20.0% |
!! | AAGAATAATGAAGAAACAAT+GGG | - | chr4.2:80644176-80644195 | None:intergenic | 20.0% |
!! | ATATGTAATAATGCAAAAAG+GGG | + | chr4.2:80644757-80644776 | MS.gene78818:CDS | 20.0% |
!! | GATATGTAATAATGCAAAAA+GGG | + | chr4.2:80644756-80644775 | MS.gene78818:CDS | 20.0% |
!! | TAAGAATAATGAAGAAACAA+TGG | - | chr4.2:80644177-80644196 | None:intergenic | 20.0% |
!!! | AAGTTAGAAGAGAATTATTT+TGG | + | chr4.2:80644713-80644732 | MS.gene78818:CDS | 20.0% |
!!! | AGTTAGAAGAGAATTATTTT+GGG | + | chr4.2:80644714-80644733 | MS.gene78818:CDS | 20.0% |
! | AAAATCTTAAACCAGAAGAA+AGG | + | chr4.2:80644645-80644664 | MS.gene78818:CDS | 25.0% |
! | AAATTGTTCATTTATCTCCA+TGG | + | chr4.2:80643883-80643902 | MS.gene78818:CDS | 25.0% |
! | AATTGTTCATTTATCTCCAT+GGG | + | chr4.2:80643884-80643903 | MS.gene78818:CDS | 25.0% |
! | AGTTTCATCAATAATGCTAT+TGG | + | chr4.2:80645142-80645161 | MS.gene78818:CDS | 25.0% |
! | GGATATGTAATAATGCAAAA+AGG | + | chr4.2:80644755-80644774 | MS.gene78818:CDS | 25.0% |
! | TAATGAGTGATATTGAATCT+TGG | + | chr4.2:80644858-80644877 | MS.gene78818:CDS | 25.0% |
! | TACTTATAATTAAACGCCAA+AGG | - | chr4.2:80644622-80644641 | None:intergenic | 25.0% |
!! | TTGTCTTCCTTATGATATTT+TGG | + | chr4.2:80645084-80645103 | MS.gene78818:CDS | 25.0% |
!! | TTTGTTTAAGATGGTCTATT+TGG | - | chr4.2:80643974-80643993 | None:intergenic | 25.0% |
AACTATTACGGTAATGACTT+TGG | + | chr4.2:80644956-80644975 | MS.gene78818:CDS | 30.0% | |
AATAATGAAGAAACAATGGG+AGG | - | chr4.2:80644173-80644192 | None:intergenic | 30.0% | |
AATGCAAAAAGGGGAATTAA+TGG | + | chr4.2:80644766-80644785 | MS.gene78818:CDS | 30.0% | |
AATTGCTATGGAAATGAACA+AGG | + | chr4.2:80644805-80644824 | MS.gene78818:CDS | 30.0% | |
ATACTTTGGTTGAAGTATGT+CGG | - | chr4.2:80644147-80644166 | None:intergenic | 30.0% | |
ATAGCCTCCAAAATATCATA+AGG | - | chr4.2:80645094-80645113 | None:intergenic | 30.0% | |
ATCAAAATCTCATCATGAGA+AGG | + | chr4.2:80644835-80644854 | MS.gene78818:CDS | 30.0% | |
ATTCTTGTCCTACAATCTAT+GGG | - | chr4.2:80644686-80644705 | None:intergenic | 30.0% | |
ATTGATGAAACTAGAATCCA+TGG | - | chr4.2:80645134-80645153 | None:intergenic | 30.0% | |
GAATTAATGGAAAGTGGTAT+TGG | + | chr4.2:80644779-80644798 | MS.gene78818:CDS | 30.0% | |
GGATCTCAAATTTCTCAAAT+TGG | + | chr4.2:80643905-80643924 | MS.gene78818:CDS | 30.0% | |
GTTGAAAACCCCATTTATAT+CGG | + | chr4.2:80644880-80644899 | MS.gene78818:CDS | 30.0% | |
GTTGGACTTCAAAGAAATAT+TGG | + | chr4.2:80645010-80645029 | MS.gene78818:CDS | 30.0% | |
TTTGTGAAAGGAAACAGTAT+GGG | - | chr4.2:80644419-80644438 | None:intergenic | 30.0% | |
! | GAATTTGTTCCTTTGTAAAG+TGG | - | chr4.2:80644487-80644506 | None:intergenic | 30.0% |
!! | AGGAAAGTGTTTGTTTAAGA+TGG | - | chr4.2:80643983-80644002 | None:intergenic | 30.0% |
!! | TATGATATTTTGGAGGCTAT+AGG | + | chr4.2:80645094-80645113 | MS.gene78818:CDS | 30.0% |
!! | TCTTCCTTATGATATTTTGG+AGG | + | chr4.2:80645087-80645106 | MS.gene78818:CDS | 30.0% |
!! | TGGTATTGGTAAAATTGCTA+TGG | + | chr4.2:80644793-80644812 | MS.gene78818:CDS | 30.0% |
!!! | AATTATTTTGGGAGTGGAAT+CGG | + | chr4.2:80644725-80644744 | MS.gene78818:CDS | 30.0% |
!!! | ATGGTCTATTTGGTTTGTTT+TGG | - | chr4.2:80643964-80643983 | None:intergenic | 30.0% |
!!! | TGGTCTATTTGGTTTGTTTT+GGG | - | chr4.2:80643963-80643982 | None:intergenic | 30.0% |
!!! | TTTGGTTTGTTTTGGGTTTA+TGG | - | chr4.2:80643956-80643975 | None:intergenic | 30.0% |
AAACTAGAATCCATGGACAT+AGG | - | chr4.2:80645127-80645146 | None:intergenic | 35.0% | |
AAAGGGGAATTAATGGAAAG+TGG | + | chr4.2:80644773-80644792 | MS.gene78818:CDS | 35.0% | |
AACTAGAATCCATGGACATA+GGG | - | chr4.2:80645126-80645145 | None:intergenic | 35.0% | |
AAGCCTATTGCAGTTAGAAA+TGG | + | chr4.2:80644986-80645005 | MS.gene78818:CDS | 35.0% | |
ACAATCCAAGCAACAAATCA+TGG | + | chr4.2:80643834-80643853 | MS.gene78818:CDS | 35.0% | |
AGCCTATTGCAGTTAGAAAT+GGG | + | chr4.2:80644987-80645006 | MS.gene78818:CDS | 35.0% | |
ATGGAAAAGAAGACCTCTTT+GGG | - | chr4.2:80643937-80643956 | None:intergenic | 35.0% | |
ATGGGAAGGTTAACATTGTT+TGG | - | chr4.2:80644401-80644420 | None:intergenic | 35.0% | |
ATTAACCATGTGTGTGTAGA+CGG | + | chr4.2:80644290-80644309 | MS.gene78818:CDS | 35.0% | |
ATTACGGTAATGACTTTGGT+TGG | + | chr4.2:80644960-80644979 | MS.gene78818:CDS | 35.0% | |
ATTGGTAGAGTTATTGTGCT+TGG | + | chr4.2:80645028-80645047 | MS.gene78818:CDS | 35.0% | |
CAAGTAACAGAGTTAATCGA+CGG | + | chr4.2:80644248-80644267 | MS.gene78818:CDS | 35.0% | |
CATACTGTTTCCTTTCACAA+AGG | + | chr4.2:80644418-80644437 | MS.gene78818:CDS | 35.0% | |
CATTCTTGTCCTACAATCTA+TGG | - | chr4.2:80644687-80644706 | None:intergenic | 35.0% | |
CTTTGTGAAAGGAAACAGTA+TGG | - | chr4.2:80644420-80644439 | None:intergenic | 35.0% | |
TATGGAAAAGAAGACCTCTT+TGG | - | chr4.2:80643938-80643957 | None:intergenic | 35.0% | |
TCGAATCTTCCACTTTACAA+AGG | + | chr4.2:80644475-80644494 | MS.gene78818:CDS | 35.0% | |
TTAATCGACGGTATCTTCAT+TGG | + | chr4.2:80644260-80644279 | MS.gene78818:CDS | 35.0% | |
TTACGGTAATGACTTTGGTT+GGG | + | chr4.2:80644961-80644980 | MS.gene78818:CDS | 35.0% | |
TTGGCATTTCATCAACTCTT+GGG | + | chr4.2:80644322-80644341 | MS.gene78818:CDS | 35.0% | |
TTTGGCATTTCATCAACTCT+TGG | + | chr4.2:80644321-80644340 | MS.gene78818:CDS | 35.0% | |
! | AGATTACTTGATGATCTACC+TGG | - | chr4.2:80644908-80644927 | None:intergenic | 35.0% |
! | GTTACAAATGATGGAACATG+AGG | - | chr4.2:80644075-80644094 | None:intergenic | 35.0% |
! | TTGAGAAATTTGAGATCCCA+TGG | - | chr4.2:80643903-80643922 | None:intergenic | 35.0% |
! | TTTTGTGCATCCTTTGTGAA+AGG | - | chr4.2:80644431-80644450 | None:intergenic | 35.0% |
!!! | AGGTACTTTTGTTGGCTTAT+TGG | - | chr4.2:80644360-80644379 | None:intergenic | 35.0% |
!!! | GAAGAGAATTATTTTGGGAG+TGG | + | chr4.2:80644719-80644738 | MS.gene78818:CDS | 35.0% |
!!! | TCGAAAGAAGGTACTTTTGT+TGG | - | chr4.2:80644368-80644387 | None:intergenic | 35.0% |
AAAAGAAGACCTCTTTGGGT+TGG | - | chr4.2:80643933-80643952 | None:intergenic | 40.0% | |
AACGATGTGAAAAGCTACGA+AGG | + | chr4.2:80644200-80644219 | MS.gene78818:CDS | 40.0% | |
AAGTACCTTCTTTCGAACGT+TGG | + | chr4.2:80644372-80644391 | MS.gene78818:CDS | 40.0% | |
ACAATGGGAGGAACATACTT+TGG | - | chr4.2:80644161-80644180 | None:intergenic | 40.0% | |
ACCAGCGTTGTTACAAATGA+TGG | - | chr4.2:80644084-80644103 | None:intergenic | 40.0% | |
ACCCCATTTCTAACTGCAAT+AGG | - | chr4.2:80644992-80645011 | None:intergenic | 40.0% | |
ATTGCAGTTAGAAATGGGGT+TGG | + | chr4.2:80644992-80645011 | MS.gene78818:CDS | 40.0% | |
CAAGCAACAAATCATGGTGA+TGG | + | chr4.2:80643840-80643859 | MS.gene78818:CDS | 40.0% | |
GCCTATTGCAGTTAGAAATG+GGG | + | chr4.2:80644988-80645007 | MS.gene78818:CDS | 40.0% | |
GTTACTTGTACTGCAAGTAG+TGG | - | chr4.2:80644236-80644255 | None:intergenic | 40.0% | |
TACCTGGCTCCGATATAAAT+GGG | - | chr4.2:80644892-80644911 | None:intergenic | 40.0% | |
TACGGTAATGACTTTGGTTG+GGG | + | chr4.2:80644962-80644981 | MS.gene78818:CDS | 40.0% | |
TCACCACGGTTCAACTATTA+CGG | + | chr4.2:80644944-80644963 | MS.gene78818:CDS | 40.0% | |
TCCATCATTTGTAACAACGC+TGG | + | chr4.2:80644080-80644099 | MS.gene78818:CDS | 40.0% | |
TCGTCTTACCCATAGATTGT+AGG | + | chr4.2:80644675-80644694 | MS.gene78818:CDS | 40.0% | |
TGAAAGGAAACAGTATGGGA+AGG | - | chr4.2:80644415-80644434 | None:intergenic | 40.0% | |
TGGAAAGAAGTTAAGTGTGG+AGG | - | chr4.2:80644003-80644022 | None:intergenic | 40.0% | |
TGGTGGAAAGAAGTTAAGTG+TGG | - | chr4.2:80644006-80644025 | None:intergenic | 40.0% | |
TTACCGTAATAGTTGAACCG+TGG | - | chr4.2:80644950-80644969 | None:intergenic | 40.0% | |
!! | AAGCGCTTTTAAGTCACCTT+TGG | + | chr4.2:80644603-80644622 | MS.gene78818:CDS | 40.0% |
!! | AATGGTAGTGTTTTCAGCTG+TGG | - | chr4.2:80644123-80644142 | None:intergenic | 40.0% |
!! | ACAAATCATGGTGATGGTGA+TGG | + | chr4.2:80643846-80643865 | MS.gene78818:CDS | 40.0% |
!! | CATCACCATGATTTGTTGCT+TGG | - | chr4.2:80643842-80643861 | None:intergenic | 40.0% |
AAATTGGCACCAACCCAAAG+AGG | + | chr4.2:80643921-80643940 | MS.gene78818:CDS | 45.0% | |
ACCTGGCTCCGATATAAATG+GGG | - | chr4.2:80644891-80644910 | None:intergenic | 45.0% | |
ACGAATGCAGACCTTTCTTC+TGG | - | chr4.2:80644659-80644678 | None:intergenic | 45.0% | |
CTACCTGGCTCCGATATAAA+TGG | - | chr4.2:80644893-80644912 | None:intergenic | 45.0% | |
GGAAACCAACGTTCGAAAGA+AGG | - | chr4.2:80644380-80644399 | None:intergenic | 45.0% | |
GGTAGAGTTATTGTGCTTGG+TGG | + | chr4.2:80645031-80645050 | MS.gene78818:CDS | 45.0% | |
TGATAGCAAGCAGTTCACCA+CGG | + | chr4.2:80644930-80644949 | MS.gene78818:CDS | 45.0% | |
TGGTTGAAGTATGTCGGCAA+TGG | - | chr4.2:80644141-80644160 | None:intergenic | 45.0% | |
! | GTGTAGACGGCAAGTCATTT+TGG | + | chr4.2:80644303-80644322 | MS.gene78818:CDS | 45.0% |
!! | ATGGAACATGAGGCGTTGTT+AGG | - | chr4.2:80644065-80644084 | None:intergenic | 45.0% |
AACTTCTTTCCACCACTCGC+TGG | + | chr4.2:80644011-80644030 | MS.gene78818:CDS | 50.0% | |
ACCCCATTTATATCGGAGCC+AGG | + | chr4.2:80644887-80644906 | MS.gene78818:CDS | 50.0% | |
ACTTGCCGTCTACACACACA+TGG | - | chr4.2:80644298-80644317 | None:intergenic | 50.0% | |
AGGAAACGACCCTATGTCCA+TGG | + | chr4.2:80645114-80645133 | MS.gene78818:CDS | 50.0% | |
ATTACAAGACGACCAGCGAG+TGG | - | chr4.2:80644026-80644045 | None:intergenic | 50.0% | |
! | TAGTGTTTTCAGCTGTGGCG+TGG | - | chr4.2:80644118-80644137 | None:intergenic | 50.0% |
!! | GTGCTTGGTGGTGCAGAAGA+AGG | + | chr4.2:80645043-80645062 | MS.gene78818:CDS | 55.0% |
ACAAGACGACCAGCGAGTGG+TGG | - | chr4.2:80644023-80644042 | None:intergenic | 60.0% | |
GGGAGTGGAATCGGAGCAAC+TGG | + | chr4.2:80644734-80644753 | MS.gene78818:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 80643804 | 80645177 | 80643804 | ID=MS.gene78818 |
chr4.2 | mRNA | 80643804 | 80645177 | 80643804 | ID=MS.gene78818.t1;Parent=MS.gene78818 |
chr4.2 | exon | 80643804 | 80645177 | 80643804 | ID=MS.gene78818.t1.exon1;Parent=MS.gene78818.t1 |
chr4.2 | CDS | 80643804 | 80645177 | 80643804 | ID=cds.MS.gene78818.t1;Parent=MS.gene78818.t1 |
Gene Sequence |
Protein sequence |