Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99221.t1 | XP_004509128.1 | 71.3 | 443 | 116 | 4 | 1 | 443 | 1 | 432 | 3.40E-177 | 631.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99221.t1 | Q9SND9 | 37.1 | 450 | 271 | 6 | 1 | 446 | 1 | 442 | 9.3e-83 | 308.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99221.t1 | A0A1S2YSC3 | 71.3 | 443 | 116 | 4 | 1 | 443 | 1 | 432 | 2.4e-177 | 631.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059711 | MS.gene99221 | 0.803434 | 3.49E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99221.t1 | MTR_4g094835 | 68.653 | 453 | 131 | 5 | 1 | 448 | 1 | 447 | 0.0 | 629 |
MS.gene99221.t1 | MTR_4g094838 | 66.004 | 453 | 124 | 5 | 4 | 447 | 1 | 432 | 0.0 | 588 |
MS.gene99221.t1 | MTR_4g094842 | 58.499 | 453 | 169 | 8 | 1 | 443 | 1 | 444 | 0.0 | 526 |
MS.gene99221.t1 | MTR_4g094832 | 67.539 | 382 | 104 | 4 | 78 | 447 | 57 | 430 | 0.0 | 521 |
MS.gene99221.t1 | MTR_0190s0020 | 57.965 | 452 | 175 | 8 | 1 | 447 | 1 | 442 | 6.66e-179 | 508 |
MS.gene99221.t1 | MTR_8g041770 | 55.973 | 452 | 183 | 9 | 1 | 447 | 1 | 441 | 1.80e-172 | 491 |
MS.gene99221.t1 | MTR_4g094828 | 54.664 | 461 | 186 | 11 | 1 | 448 | 1 | 451 | 1.07e-171 | 489 |
MS.gene99221.t1 | MTR_3g088420 | 56.570 | 449 | 177 | 10 | 1 | 447 | 1 | 433 | 5.69e-170 | 484 |
MS.gene99221.t1 | MTR_4g022825 | 54.767 | 451 | 183 | 11 | 1 | 444 | 1 | 437 | 6.77e-166 | 474 |
MS.gene99221.t1 | MTR_8g079710 | 56.696 | 448 | 172 | 11 | 1 | 438 | 1 | 436 | 3.61e-165 | 473 |
MS.gene99221.t1 | MTR_4g022800 | 54.705 | 457 | 182 | 11 | 1 | 447 | 1 | 442 | 3.72e-164 | 470 |
MS.gene99221.t1 | MTR_4g022290 | 54.825 | 456 | 180 | 11 | 1 | 444 | 1 | 442 | 5.28e-164 | 470 |
MS.gene99221.t1 | MTR_4g022720 | 54.425 | 452 | 184 | 10 | 1 | 447 | 1 | 435 | 7.88e-163 | 466 |
MS.gene99221.t1 | MTR_4g022670 | 53.422 | 453 | 187 | 11 | 1 | 444 | 1 | 438 | 7.03e-161 | 462 |
MS.gene99221.t1 | MTR_3g026310 | 53.159 | 459 | 186 | 12 | 1 | 444 | 1 | 445 | 4.10e-159 | 457 |
MS.gene99221.t1 | MTR_7g026860 | 53.626 | 455 | 186 | 12 | 1 | 447 | 1 | 438 | 3.72e-157 | 452 |
MS.gene99221.t1 | MTR_4g022760 | 48.132 | 455 | 170 | 10 | 1 | 447 | 1 | 397 | 2.39e-135 | 395 |
MS.gene99221.t1 | MTR_6g016815 | 42.411 | 448 | 176 | 12 | 1 | 447 | 15 | 381 | 5.31e-102 | 309 |
MS.gene99221.t1 | MTR_3g101900 | 39.767 | 430 | 243 | 7 | 27 | 447 | 26 | 448 | 2.94e-96 | 297 |
MS.gene99221.t1 | MTR_3g102020 | 39.394 | 462 | 250 | 11 | 3 | 448 | 5 | 452 | 7.91e-95 | 293 |
MS.gene99221.t1 | MTR_3g101930 | 39.140 | 442 | 243 | 8 | 21 | 444 | 19 | 452 | 1.65e-93 | 290 |
MS.gene99221.t1 | MTR_3g102010 | 38.696 | 460 | 253 | 11 | 4 | 448 | 7 | 452 | 4.17e-91 | 284 |
MS.gene99221.t1 | MTR_3g101960 | 38.178 | 461 | 258 | 9 | 3 | 449 | 5 | 452 | 8.14e-91 | 283 |
MS.gene99221.t1 | MTR_3g101970 | 38.551 | 428 | 235 | 8 | 27 | 444 | 25 | 434 | 1.21e-88 | 277 |
MS.gene99221.t1 | MTR_5g081960 | 34.244 | 476 | 244 | 10 | 24 | 443 | 20 | 482 | 1.94e-81 | 260 |
MS.gene99221.t1 | MTR_4g094825 | 76.301 | 173 | 36 | 3 | 19 | 188 | 80 | 250 | 2.02e-81 | 257 |
MS.gene99221.t1 | MTR_4g094825 | 76.000 | 150 | 26 | 1 | 298 | 447 | 252 | 391 | 4.32e-70 | 228 |
MS.gene99221.t1 | MTR_3g070170 | 35.294 | 459 | 240 | 10 | 24 | 443 | 26 | 466 | 3.15e-80 | 256 |
MS.gene99221.t1 | MTR_8g040780 | 55.714 | 210 | 88 | 3 | 236 | 442 | 20 | 227 | 7.49e-74 | 233 |
MS.gene99221.t1 | MTR_4g015180 | 32.794 | 494 | 260 | 9 | 8 | 443 | 4 | 483 | 9.52e-73 | 237 |
MS.gene99221.t1 | MTR_8g040760 | 53.881 | 219 | 94 | 5 | 1 | 217 | 1 | 214 | 4.98e-68 | 216 |
MS.gene99221.t1 | MTR_3g102030 | 32.938 | 337 | 183 | 7 | 75 | 401 | 17 | 320 | 1.02e-49 | 172 |
MS.gene99221.t1 | MTR_7g026850 | 50.588 | 170 | 79 | 4 | 36 | 203 | 12 | 178 | 1.07e-47 | 162 |
MS.gene99221.t1 | MTR_7g026770 | 48.619 | 181 | 70 | 3 | 151 | 331 | 132 | 289 | 2.73e-47 | 165 |
MS.gene99221.t1 | MTR_6g045553 | 28.982 | 452 | 275 | 12 | 27 | 443 | 31 | 471 | 7.64e-47 | 168 |
MS.gene99221.t1 | MTR_6g034485 | 53.846 | 130 | 55 | 2 | 196 | 325 | 1 | 125 | 3.17e-42 | 146 |
MS.gene99221.t1 | MTR_6g034495 | 52.817 | 142 | 58 | 3 | 56 | 188 | 19 | 160 | 2.41e-41 | 145 |
MS.gene99221.t1 | MTR_8g075610 | 27.949 | 390 | 241 | 17 | 64 | 436 | 47 | 413 | 1.42e-30 | 122 |
MS.gene99221.t1 | MTR_4g007540 | 30.357 | 392 | 237 | 19 | 64 | 438 | 56 | 428 | 2.48e-30 | 122 |
MS.gene99221.t1 | MTR_8g096530 | 31.105 | 344 | 206 | 13 | 64 | 396 | 59 | 382 | 7.16e-29 | 118 |
MS.gene99221.t1 | MTR_3g098980 | 27.688 | 372 | 243 | 11 | 64 | 428 | 66 | 418 | 4.76e-27 | 113 |
MS.gene99221.t1 | MTR_7g026830 | 58.537 | 82 | 34 | 0 | 94 | 175 | 16 | 97 | 6.86e-27 | 103 |
MS.gene99221.t1 | MTR_2g105330 | 27.937 | 383 | 237 | 19 | 64 | 428 | 56 | 417 | 1.08e-26 | 112 |
MS.gene99221.t1 | MTR_2g064495 | 27.937 | 383 | 237 | 19 | 64 | 428 | 56 | 417 | 2.29e-26 | 110 |
MS.gene99221.t1 | MTR_3g026950 | 25.123 | 406 | 251 | 13 | 61 | 432 | 51 | 437 | 2.56e-25 | 108 |
MS.gene99221.t1 | MTR_3g049150 | 24.557 | 395 | 262 | 12 | 61 | 432 | 52 | 433 | 1.10e-24 | 106 |
MS.gene99221.t1 | MTR_4g127650 | 24.601 | 439 | 287 | 15 | 26 | 436 | 26 | 448 | 2.35e-24 | 105 |
MS.gene99221.t1 | MTR_7g027175 | 27.604 | 384 | 253 | 10 | 59 | 434 | 63 | 429 | 2.63e-24 | 105 |
MS.gene99221.t1 | MTR_4g097090 | 24.434 | 442 | 265 | 18 | 28 | 428 | 27 | 440 | 2.31e-23 | 102 |
MS.gene99221.t1 | MTR_3g071320 | 27.103 | 321 | 206 | 10 | 29 | 333 | 24 | 332 | 9.73e-21 | 94.7 |
MS.gene99221.t1 | MTR_7g026780 | 43.750 | 112 | 37 | 2 | 336 | 447 | 26 | 111 | 2.59e-20 | 86.3 |
MS.gene99221.t1 | MTR_1g081660 | 23.174 | 397 | 266 | 13 | 31 | 409 | 31 | 406 | 1.57e-18 | 88.2 |
MS.gene99221.t1 | MTR_1g040175 | 23.529 | 408 | 272 | 17 | 61 | 450 | 61 | 446 | 1.58e-18 | 88.2 |
MS.gene99221.t1 | MTR_6g015850 | 24.353 | 464 | 300 | 13 | 3 | 436 | 7 | 449 | 1.68e-18 | 88.2 |
MS.gene99221.t1 | MTR_3g087640 | 27.753 | 454 | 260 | 23 | 29 | 434 | 29 | 462 | 2.91e-18 | 87.4 |
MS.gene99221.t1 | MTR_8g012750 | 24.390 | 410 | 257 | 15 | 29 | 396 | 24 | 422 | 3.66e-18 | 87.0 |
MS.gene99221.t1 | MTR_6g015315 | 25.208 | 361 | 231 | 12 | 63 | 399 | 62 | 407 | 4.64e-18 | 86.7 |
MS.gene99221.t1 | MTR_7g014330 | 26.173 | 405 | 247 | 18 | 31 | 400 | 26 | 413 | 6.84e-18 | 86.3 |
MS.gene99221.t1 | MTR_7g056087 | 25.773 | 388 | 247 | 18 | 62 | 429 | 56 | 422 | 1.43e-17 | 85.1 |
MS.gene99221.t1 | MTR_7g084940 | 25.797 | 345 | 223 | 11 | 64 | 396 | 69 | 392 | 3.88e-17 | 84.0 |
MS.gene99221.t1 | MTR_6g015830 | 23.656 | 465 | 305 | 15 | 3 | 436 | 7 | 452 | 5.72e-17 | 83.2 |
MS.gene99221.t1 | MTR_4g013050 | 24.863 | 366 | 200 | 13 | 58 | 397 | 47 | 363 | 6.58e-17 | 82.8 |
MS.gene99221.t1 | MTR_1g040195 | 25.349 | 430 | 247 | 21 | 32 | 434 | 23 | 405 | 8.27e-17 | 82.8 |
MS.gene99221.t1 | MTR_7g114470 | 22.706 | 436 | 296 | 13 | 32 | 443 | 25 | 443 | 9.19e-17 | 82.8 |
MS.gene99221.t1 | MTR_7g086000 | 27.363 | 402 | 255 | 16 | 62 | 436 | 58 | 449 | 1.12e-16 | 82.4 |
MS.gene99221.t1 | MTR_3g112180 | 25.806 | 279 | 189 | 8 | 60 | 329 | 57 | 326 | 1.52e-16 | 82.0 |
MS.gene99221.t1 | MTR_6g015320 | 25.281 | 356 | 236 | 11 | 63 | 399 | 65 | 409 | 1.59e-16 | 82.0 |
MS.gene99221.t1 | MTR_1g053315 | 23.362 | 351 | 234 | 15 | 64 | 397 | 78 | 410 | 1.64e-16 | 82.0 |
MS.gene99221.t1 | MTR_4g055170 | 26.781 | 351 | 227 | 11 | 64 | 399 | 69 | 404 | 3.26e-16 | 80.9 |
MS.gene99221.t1 | MTR_2g015430 | 24.932 | 369 | 246 | 12 | 40 | 399 | 40 | 386 | 6.30e-16 | 80.1 |
MS.gene99221.t1 | MTR_3g049140 | 27.230 | 213 | 142 | 5 | 231 | 432 | 20 | 230 | 6.84e-16 | 77.8 |
MS.gene99221.t1 | MTR_7g014250 | 23.649 | 444 | 288 | 17 | 29 | 438 | 24 | 450 | 7.14e-16 | 80.1 |
MS.gene99221.t1 | MTR_7g085930 | 25.269 | 372 | 236 | 13 | 64 | 402 | 59 | 421 | 7.19e-16 | 80.1 |
MS.gene99221.t1 | MTR_5g076700 | 22.759 | 435 | 296 | 13 | 32 | 443 | 24 | 441 | 9.01e-16 | 79.7 |
MS.gene99221.t1 | MTR_3g028210 | 25.602 | 457 | 292 | 19 | 4 | 428 | 8 | 448 | 2.14e-15 | 78.6 |
MS.gene99221.t1 | MTR_3g465980 | 25.424 | 295 | 203 | 7 | 59 | 344 | 63 | 349 | 4.68e-15 | 77.4 |
MS.gene99221.t1 | MTR_2g089755 | 26.190 | 378 | 219 | 17 | 64 | 399 | 73 | 432 | 5.79e-15 | 77.4 |
MS.gene99221.t1 | MTR_2g089765 | 23.874 | 444 | 284 | 18 | 29 | 431 | 37 | 467 | 7.47e-15 | 77.0 |
MS.gene99221.t1 | MTR_1g094790 | 26.000 | 450 | 261 | 23 | 39 | 449 | 32 | 448 | 2.06e-14 | 75.5 |
MS.gene99221.t1 | MTR_7g114490 | 22.664 | 428 | 286 | 15 | 32 | 434 | 24 | 431 | 4.37e-14 | 74.7 |
MS.gene99221.t1 | MTR_8g079980 | 22.753 | 356 | 240 | 11 | 59 | 402 | 54 | 386 | 4.91e-14 | 74.3 |
MS.gene99221.t1 | MTR_7g015860 | 25.623 | 281 | 165 | 9 | 147 | 397 | 147 | 413 | 9.00e-14 | 73.6 |
MS.gene99221.t1 | MTR_7g014230 | 23.844 | 411 | 253 | 16 | 29 | 400 | 26 | 415 | 9.90e-14 | 73.2 |
MS.gene99221.t1 | MTR_3g465880 | 24.746 | 295 | 210 | 7 | 58 | 344 | 64 | 354 | 1.24e-13 | 73.2 |
MS.gene99221.t1 | MTR_5g084850 | 23.056 | 360 | 235 | 15 | 62 | 408 | 57 | 387 | 3.11e-13 | 71.6 |
MS.gene99221.t1 | MTR_1g040215 | 22.917 | 384 | 259 | 15 | 32 | 397 | 23 | 387 | 6.44e-13 | 70.9 |
MS.gene99221.t1 | MTR_7g114550 | 20.920 | 435 | 303 | 13 | 32 | 443 | 24 | 440 | 8.44e-13 | 70.5 |
MS.gene99221.t1 | MTR_3g465990 | 24.296 | 284 | 187 | 7 | 59 | 329 | 63 | 331 | 1.09e-12 | 70.1 |
MS.gene99221.t1 | MTR_7g114560 | 24.149 | 323 | 209 | 11 | 32 | 332 | 24 | 332 | 1.22e-12 | 70.1 |
MS.gene99221.t1 | MTR_7g114520 | 21.789 | 436 | 300 | 14 | 32 | 443 | 25 | 443 | 1.40e-12 | 69.7 |
MS.gene99221.t1 | MTR_7g114960 | 24.752 | 404 | 264 | 18 | 61 | 443 | 60 | 444 | 1.98e-12 | 69.3 |
MS.gene99221.t1 | MTR_2g089650 | 24.041 | 391 | 255 | 17 | 64 | 424 | 65 | 443 | 2.70e-12 | 68.9 |
MS.gene99221.t1 | MTR_7g014160 | 23.821 | 424 | 251 | 16 | 49 | 428 | 60 | 455 | 2.83e-12 | 68.9 |
MS.gene99221.t1 | MTR_7g026880 | 56.863 | 51 | 20 | 1 | 394 | 444 | 2 | 50 | 3.19e-12 | 61.6 |
MS.gene99221.t1 | MTR_7g026870 | 43.662 | 71 | 34 | 2 | 291 | 355 | 81 | 151 | 4.70e-12 | 64.3 |
MS.gene99221.t1 | MTR_1g040315 | 24.679 | 312 | 199 | 12 | 32 | 323 | 23 | 318 | 5.30e-12 | 67.8 |
MS.gene99221.t1 | MTR_8g467580 | 24.944 | 449 | 275 | 19 | 23 | 443 | 18 | 432 | 7.17e-12 | 67.4 |
MS.gene99221.t1 | MTR_0502s0010 | 27.136 | 199 | 123 | 7 | 147 | 332 | 42 | 231 | 3.13e-11 | 63.5 |
MS.gene99221.t1 | MTR_5g090810 | 22.362 | 398 | 249 | 15 | 39 | 397 | 36 | 412 | 4.80e-11 | 65.1 |
MS.gene99221.t1 | MTR_7g084910 | 25.746 | 268 | 162 | 10 | 64 | 313 | 70 | 318 | 6.38e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99221.t1 | AT5G67150 | 41.111 | 450 | 250 | 7 | 1 | 443 | 1 | 442 | 9.70e-113 | 339 |
MS.gene99221.t1 | AT3G50280 | 37.111 | 450 | 271 | 6 | 1 | 446 | 1 | 442 | 5.55e-102 | 311 |
MS.gene99221.t1 | AT3G50300 | 38.731 | 457 | 262 | 8 | 1 | 448 | 1 | 448 | 4.46e-101 | 309 |
MS.gene99221.t1 | AT3G50270 | 39.052 | 443 | 262 | 6 | 6 | 444 | 7 | 445 | 2.61e-99 | 305 |
MS.gene99221.t1 | AT5G67160 | 39.243 | 423 | 230 | 9 | 27 | 442 | 25 | 427 | 1.88e-93 | 289 |
MS.gene99221.t1 | AT5G38130 | 38.249 | 434 | 252 | 7 | 1 | 429 | 21 | 443 | 2.34e-93 | 290 |
MS.gene99221.t1 | AT5G42830 | 35.280 | 428 | 258 | 8 | 27 | 443 | 26 | 445 | 7.88e-84 | 265 |
MS.gene99221.t1 | AT2G39980 | 33.983 | 462 | 246 | 6 | 29 | 443 | 27 | 476 | 3.89e-83 | 264 |
MS.gene99221.t1 | AT5G07850 | 36.952 | 433 | 251 | 9 | 31 | 449 | 31 | 455 | 1.63e-80 | 256 |
MS.gene99221.t1 | AT5G07860 | 35.897 | 429 | 245 | 9 | 31 | 443 | 31 | 445 | 7.88e-79 | 252 |
MS.gene99221.t1 | AT5G01210 | 34.061 | 458 | 252 | 7 | 24 | 443 | 20 | 465 | 7.74e-76 | 245 |
MS.gene99221.t1 | AT3G50280 | 38.413 | 315 | 188 | 3 | 135 | 446 | 1 | 312 | 1.63e-75 | 239 |
MS.gene99221.t1 | AT5G07870 | 35.360 | 444 | 251 | 9 | 31 | 449 | 31 | 463 | 8.32e-75 | 242 |
MS.gene99221.t1 | AT5G23940 | 31.954 | 435 | 271 | 11 | 27 | 443 | 21 | 448 | 9.25e-61 | 206 |
MS.gene99221.t1 | AT3G50290 | 39.925 | 268 | 154 | 4 | 132 | 394 | 4 | 269 | 1.22e-59 | 196 |
MS.gene99221.t1 | AT5G48930 | 29.058 | 382 | 241 | 16 | 64 | 431 | 56 | 421 | 1.55e-27 | 114 |
MS.gene99221.t1 | AT5G41040 | 28.418 | 373 | 242 | 12 | 61 | 424 | 66 | 422 | 2.10e-26 | 111 |
MS.gene99221.t1 | AT5G41040 | 28.418 | 373 | 242 | 12 | 61 | 424 | 82 | 438 | 2.29e-26 | 111 |
MS.gene99221.t1 | AT3G48720 | 27.877 | 391 | 244 | 17 | 62 | 436 | 59 | 427 | 3.99e-25 | 107 |
MS.gene99221.t1 | AT2G40230 | 25.362 | 414 | 285 | 8 | 1 | 407 | 1 | 397 | 4.42e-24 | 104 |
MS.gene99221.t1 | AT3G29590 | 25.408 | 429 | 301 | 9 | 23 | 438 | 20 | 442 | 8.80e-24 | 103 |
MS.gene99221.t1 | AT1G78990 | 28.184 | 369 | 219 | 14 | 51 | 397 | 52 | 396 | 1.37e-23 | 103 |
MS.gene99221.t1 | AT1G28680 | 26.590 | 346 | 226 | 10 | 64 | 399 | 62 | 389 | 1.92e-22 | 99.8 |
MS.gene99221.t1 | AT2G19070 | 24.198 | 405 | 266 | 13 | 59 | 436 | 53 | 443 | 3.29e-22 | 99.0 |
MS.gene99221.t1 | AT5G63560 | 26.649 | 379 | 237 | 14 | 64 | 428 | 61 | 412 | 6.30e-22 | 98.2 |
MS.gene99221.t1 | AT1G28680 | 26.871 | 294 | 196 | 7 | 67 | 353 | 65 | 346 | 5.58e-21 | 94.7 |
MS.gene99221.t1 | AT1G24430 | 26.486 | 370 | 229 | 15 | 62 | 420 | 60 | 397 | 4.82e-20 | 92.4 |
MS.gene99221.t1 | AT3G03480 | 26.914 | 405 | 250 | 18 | 32 | 416 | 33 | 411 | 9.90e-19 | 88.6 |
MS.gene99221.t1 | AT3G29670 | 25.877 | 456 | 284 | 20 | 3 | 428 | 2 | 433 | 4.64e-18 | 86.7 |
MS.gene99221.t1 | AT5G57840 | 25.296 | 423 | 244 | 19 | 44 | 428 | 34 | 422 | 9.93e-18 | 85.5 |
MS.gene99221.t1 | AT5G39090 | 25.909 | 440 | 276 | 22 | 19 | 431 | 16 | 432 | 2.44e-17 | 84.3 |
MS.gene99221.t1 | AT3G30280 | 24.667 | 450 | 264 | 19 | 32 | 443 | 20 | 432 | 5.59e-17 | 83.2 |
MS.gene99221.t1 | AT5G16410 | 23.596 | 356 | 227 | 12 | 62 | 397 | 89 | 419 | 1.74e-16 | 82.0 |
MS.gene99221.t1 | AT5G39080 | 22.609 | 460 | 302 | 16 | 14 | 436 | 11 | 453 | 1.92e-16 | 81.6 |
MS.gene99221.t1 | AT3G26040 | 24.627 | 402 | 254 | 16 | 60 | 443 | 55 | 425 | 2.00e-16 | 81.6 |
MS.gene99221.t1 | AT5G07080 | 23.611 | 432 | 283 | 13 | 40 | 448 | 43 | 450 | 3.19e-16 | 80.9 |
MS.gene99221.t1 | AT1G31490 | 24.685 | 397 | 261 | 15 | 61 | 442 | 59 | 432 | 4.38e-16 | 80.5 |
MS.gene99221.t1 | AT5G17540 | 24.041 | 391 | 261 | 13 | 32 | 405 | 23 | 394 | 6.26e-16 | 80.1 |
MS.gene99221.t1 | AT5G39050 | 23.175 | 315 | 207 | 10 | 145 | 431 | 145 | 452 | 1.29e-14 | 76.3 |
MS.gene99221.t1 | AT2G23510 | 23.188 | 345 | 243 | 9 | 64 | 399 | 69 | 400 | 1.99e-14 | 75.5 |
MS.gene99221.t1 | AT5G47950 | 24.419 | 430 | 273 | 17 | 32 | 443 | 20 | 415 | 7.34e-14 | 73.6 |
MS.gene99221.t1 | AT3G47170 | 23.490 | 298 | 206 | 8 | 57 | 335 | 58 | 352 | 9.43e-14 | 73.6 |
MS.gene99221.t1 | AT1G03390 | 26.836 | 354 | 223 | 16 | 61 | 397 | 73 | 407 | 2.29e-13 | 72.4 |
MS.gene99221.t1 | AT3G29635 | 24.352 | 386 | 257 | 14 | 64 | 428 | 67 | 438 | 5.75e-13 | 70.9 |
MS.gene99221.t1 | AT5G61160 | 24.632 | 272 | 179 | 10 | 145 | 397 | 139 | 403 | 2.23e-12 | 69.3 |
MS.gene99221.t1 | AT5G23970 | 24.581 | 358 | 218 | 15 | 61 | 399 | 51 | 375 | 9.41e-12 | 67.0 |
MS.gene99221.t1 | AT1G03495 | 26.990 | 289 | 180 | 12 | 59 | 323 | 61 | 342 | 1.56e-11 | 65.9 |
Find 110 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTCTTTCTTATGAGATTT+TGG | 0.242506 | 8.4:+26237685 | MS.gene99221:CDS |
TGTTCCACTTCCAAGTTCTA+TGG | 0.245627 | 8.4:+26237743 | MS.gene99221:CDS |
TTCCGAAATAATCCTCTTCT+AGG | 0.269532 | 8.4:-26237322 | None:intergenic |
GGATTCTAAGCTTTCTTCTA+AGG | 0.272080 | 8.4:-26237081 | None:intergenic |
GGGATTGGTAACAAGTATAA+TGG | 0.290220 | 8.4:+26237611 | MS.gene99221:CDS |
TTGGTATTGGAATGGGTTGT+TGG | 0.293902 | 8.4:-26236560 | None:intergenic |
GTTTCTTATGTGTTGTTTAT+AGG | 0.297168 | 8.4:+26237275 | MS.gene99221:CDS |
GCAGGAGAGGTTCTAGAGTA+TGG | 0.316001 | 8.4:+26237377 | MS.gene99221:CDS |
GGGGAATGACACTGAGTTCA+TGG | 0.325881 | 8.4:+26237715 | MS.gene99221:CDS |
TACATTCTGATAAGATAATA+AGG | 0.327777 | 8.4:+26237441 | MS.gene99221:CDS |
TTTGTTTAAGATGGTTTATA+TGG | 0.335226 | 8.4:-26236584 | None:intergenic |
TTGCAGACGGCAAGTCGTTT+TGG | 0.346102 | 8.4:+26236916 | MS.gene99221:CDS |
GAAACATCTTCTTGTGGATC+AGG | 0.367065 | 8.4:-26237257 | None:intergenic |
CCCCTAGAAGAGGATTATTT+CGG | 0.368115 | 8.4:+26237320 | MS.gene99221:CDS |
TGGTTTCAAGATGGAGGAAT+TGG | 0.375248 | 8.4:-26236515 | None:intergenic |
TTGGAATTTCAATATCGTTT+GGG | 0.375437 | 8.4:-26237016 | None:intergenic |
TATATGGTTTGGTATTGGAA+TGG | 0.381013 | 8.4:-26236568 | None:intergenic |
AAAGATTCTTTCGGCTAACT+TGG | 0.384070 | 8.4:-26237102 | None:intergenic |
TGGTTTATATGGTTTGGTAT+TGG | 0.385182 | 8.4:-26236573 | None:intergenic |
AAGCGCTATTATCTCACGTT+TGG | 0.385318 | 8.4:+26237210 | MS.gene99221:CDS |
TGTGAAATGAAAGATTCTTT+CGG | 0.395295 | 8.4:-26237111 | None:intergenic |
TTAAGATGGTTTATATGGTT+TGG | 0.398195 | 8.4:-26236579 | None:intergenic |
ATTGGAATTTCAATATCGTT+TGG | 0.400486 | 8.4:-26237017 | None:intergenic |
AGCTTTCTTCTAAGGAGCCT+TGG | 0.410094 | 8.4:-26237073 | None:intergenic |
TTTGGCATTTCGTTAATTCA+TGG | 0.411811 | 8.4:+26236934 | MS.gene99221:CDS |
TTGTGATTGTTGTTGTCAAT+TGG | 0.414221 | 8.4:-26236450 | None:intergenic |
AGGAAAGTGTTTGTTTAAGA+TGG | 0.419599 | 8.4:-26236593 | None:intergenic |
TTGGTTGTGACACAGCTTCA+TGG | 0.433925 | 8.4:-26236827 | None:intergenic |
TTAAGTGACGGCGTCTTCAT+TGG | 0.436912 | 8.4:+26236873 | MS.gene99221:CDS |
TAAGGAATCATTACGAGTCT+TGG | 0.444628 | 8.4:+26237459 | MS.gene99221:CDS |
ATATGGTTTGGTATTGGAAT+GGG | 0.445755 | 8.4:-26236567 | None:intergenic |
TCAAAAGCAAACGCCGAAGC+TGG | 0.446381 | 8.4:+26237158 | MS.gene99221:CDS |
GAGGTGTATAGTTTGATTGA+AGG | 0.450138 | 8.4:-26236764 | None:intergenic |
ACTGGTGGAGATCACTTTGA+TGG | 0.452170 | 8.4:-26236415 | None:intergenic |
AACTTCTTTCCACCCCTCGC+TGG | 0.454179 | 8.4:+26236624 | MS.gene99221:CDS |
TCCGAAATAATCCTCTTCTA+GGG | 0.454875 | 8.4:-26237321 | None:intergenic |
TGGAATCGGAAAAGTTGCTT+TGG | 0.455281 | 8.4:+26237397 | MS.gene99221:CDS |
TTTGTGAAAGGGAAGTGTAT+TGG | 0.457281 | 8.4:-26237035 | None:intergenic |
GGATTGGTAACAAGTATAAT+GGG | 0.461227 | 8.4:+26237612 | MS.gene99221:CDS |
GCATCATTTCCCATAGAACT+TGG | 0.464131 | 8.4:-26237753 | None:intergenic |
GGGAAAATTACAGTGTTTGC+TGG | 0.464637 | 8.4:+26237632 | MS.gene99221:CDS |
GGGAACCAACGTTGAAATGA+AGG | 0.474068 | 8.4:-26236996 | None:intergenic |
AATTGGTGCTTGAATTGTAC+TGG | 0.484057 | 8.4:-26236433 | None:intergenic |
GAAAAGAAGGCCTGCTTGGA+TGG | 0.486070 | 8.4:-26236535 | None:intergenic |
ATCCCACTTCGAACTGCCAC+AGG | 0.501391 | 8.4:-26237593 | None:intergenic |
TGGGTTGTTGGTGGAAAAGA+AGG | 0.501427 | 8.4:-26236548 | None:intergenic |
TCATGGTCACAAATCTCAAA+AGG | 0.504161 | 8.4:+26236951 | MS.gene99221:CDS |
TGGAAAGAAGTTGAGGGTGG+AGG | 0.509184 | 8.4:-26236613 | None:intergenic |
GTTCCACTTCCAAGTTCTAT+GGG | 0.509409 | 8.4:+26237744 | MS.gene99221:CDS |
GTGGCAGTTCGAAGTGGGAT+TGG | 0.513271 | 8.4:+26237596 | MS.gene99221:CDS |
GTATTGGAATGGGTTGTTGG+TGG | 0.516749 | 8.4:-26236557 | None:intergenic |
TCCATCATTTGCAACAACCT+TGG | 0.522468 | 8.4:+26236693 | MS.gene99221:CDS |
CCACTTGGAGGACTACCACT+TGG | 0.530738 | 8.4:-26237503 | None:intergenic |
ACCAAGGTTGTTGCAAATGA+TGG | 0.532824 | 8.4:-26236694 | None:intergenic |
TTTCCCATAGAACTTGGAAG+TGG | 0.534045 | 8.4:-26237747 | None:intergenic |
GAGGTTCTAGAGTATGGAAT+CGG | 0.537759 | 8.4:+26237383 | MS.gene99221:CDS |
TAGCAATCACTTGTTGTCCA+AGG | 0.538515 | 8.4:+26237534 | MS.gene99221:CDS |
CTGCTTGGATGGTTTCAAGA+TGG | 0.545156 | 8.4:-26236524 | None:intergenic |
AACTCCCTTCATTTCAACGT+TGG | 0.545872 | 8.4:+26236991 | MS.gene99221:CDS |
GAAAATTGAATTAACACCAT+GGG | 0.549693 | 8.4:+26236488 | MS.gene99221:CDS |
GGTGGAAAAGAAGGCCTGCT+TGG | 0.549803 | 8.4:-26236539 | None:intergenic |
CGTCACTTAACTCCGTTACC+TGG | 0.550388 | 8.4:-26236860 | None:intergenic |
GCTAACGAATTACCACTTGG+AGG | 0.558087 | 8.4:-26237515 | None:intergenic |
CGAGGGGTGGAAAGAAGTTG+AGG | 0.560871 | 8.4:-26236620 | None:intergenic |
CATCTTGAAACCATCCAAGC+AGG | 0.563003 | 8.4:+26236525 | MS.gene99221:CDS |
ACAACCAACTCTAGGAGTCC+AGG | 0.567424 | 8.4:+26236842 | MS.gene99221:CDS |
TCTAGGGGCGGAATCAACCT+TGG | 0.569302 | 8.4:-26237305 | None:intergenic |
TGCAACCACGTTGTTGCAGA+CGG | 0.570748 | 8.4:+26236903 | MS.gene99221:CDS |
GTGTTTGCTGGTGCTGAAGA+AGG | 0.574224 | 8.4:+26237644 | MS.gene99221:CDS |
GGAACCAACGTTGAAATGAA+GGG | 0.576282 | 8.4:-26236995 | None:intergenic |
CTACCACTTGGAAACAACCT+TGG | 0.580849 | 8.4:-26237491 | None:intergenic |
GTTGATTCCGCCCCTAGAAG+AGG | 0.580936 | 8.4:+26237310 | MS.gene99221:CDS |
AGCCTGTGGCAGTTCGAAGT+GGG | 0.585379 | 8.4:+26237591 | MS.gene99221:CDS |
GGGTGGAAAGAAGTTGAGGG+TGG | 0.587080 | 8.4:-26236616 | None:intergenic |
GCTGTGTCACAACCAACTCT+AGG | 0.587882 | 8.4:+26236834 | MS.gene99221:CDS |
CTTGGATGGTTTCAAGATGG+AGG | 0.589594 | 8.4:-26236521 | None:intergenic |
TAGAACTTGGAAGTGGAACA+TGG | 0.589628 | 8.4:-26237740 | None:intergenic |
ACATAAGAAACATCTTCTTG+TGG | 0.596961 | 8.4:-26237263 | None:intergenic |
CCGAAATAATCCTCTTCTAG+GGG | 0.597381 | 8.4:-26237320 | None:intergenic |
AGTGCAAAATACAACGGTCG+TGG | 0.601343 | 8.4:+26236737 | MS.gene99221:CDS |
TGGAGGAATTGGAGATCCCA+TGG | 0.604811 | 8.4:-26236504 | None:intergenic |
AACTCTAGGAGTCCAGGTAA+CGG | 0.604904 | 8.4:+26236848 | MS.gene99221:CDS |
AAGAATCTTTCATTTCACAA+AGG | 0.609560 | 8.4:+26237115 | MS.gene99221:CDS |
GTTACCTGGACTCCTAGAGT+TGG | 0.609941 | 8.4:-26236846 | None:intergenic |
AGAAAATTGAATTAACACCA+TGG | 0.610904 | 8.4:+26236487 | MS.gene99221:CDS |
TGTTTATAGGTGTTAGACCA+AGG | 0.611467 | 8.4:+26237288 | MS.gene99221:CDS |
GAGGGGTGGAAAGAAGTTGA+GGG | 0.618695 | 8.4:-26236619 | None:intergenic |
ACAAGACGACCAGCGAGGGG+TGG | 0.619470 | 8.4:-26236633 | None:intergenic |
AAGCCTGTGGCAGTTCGAAG+TGG | 0.622477 | 8.4:+26237590 | MS.gene99221:CDS |
ACTGTTGTGAGGATGAAAGC+AGG | 0.624888 | 8.4:+26237359 | MS.gene99221:CDS |
TATTACAAGACGACCAGCGA+GGG | 0.630336 | 8.4:-26236637 | None:intergenic |
AAATAATCCTCTTCTAGGGG+CGG | 0.632202 | 8.4:-26237317 | None:intergenic |
GGATTATTTCGGAAACGCAG+TGG | 0.636378 | 8.4:+26237331 | MS.gene99221:CDS |
TTATTTCGGAAACGCAGTGG+TGG | 0.651714 | 8.4:+26237334 | MS.gene99221:CDS |
ATTGCTAACGAATTACCACT+TGG | 0.655593 | 8.4:-26237518 | None:intergenic |
TGGTGCTTGAATTGTACTGG+TGG | 0.661054 | 8.4:-26236430 | None:intergenic |
TGTGAGGATGAAAGCAGGAG+AGG | 0.662636 | 8.4:+26237364 | MS.gene99221:CDS |
ACACCAAGGTTGTTTCCAAG+TGG | 0.665409 | 8.4:+26237488 | MS.gene99221:CDS |
AAAACAGAATCACAAAACCA+AGG | 0.668777 | 8.4:+26237056 | MS.gene99221:CDS |
ATTACAAGACGACCAGCGAG+GGG | 0.669009 | 8.4:-26236636 | None:intergenic |
CAGGTAACGGAGTTAAGTGA+CGG | 0.674400 | 8.4:+26236861 | MS.gene99221:CDS |
TTTCACAAAGGAGAAAATCG+CGG | 0.682651 | 8.4:+26237127 | MS.gene99221:CDS |
CAGTGGTGGTTACTGTTGTG+AGG | 0.691041 | 8.4:+26237348 | MS.gene99221:CDS |
GTTGCAAATGATGGAACATG+TGG | 0.705405 | 8.4:-26236685 | None:intergenic |
CCAAGTGGTAGTCCTCCAAG+TGG | 0.727113 | 8.4:+26237503 | MS.gene99221:CDS |
TGCCACAGTGCAAAATACAA+CGG | 0.729193 | 8.4:+26236731 | MS.gene99221:CDS |
ACTTGCCGTCTGCAACAACG+TGG | 0.730274 | 8.4:-26236908 | None:intergenic |
CATGGACGAATAGTGCACCA+AGG | 0.738412 | 8.4:-26236710 | None:intergenic |
TTATTACAAGACGACCAGCG+AGG | 0.755763 | 8.4:-26236638 | None:intergenic |
AGTCTTGGTTAAGAACACCA+AGG | 0.764465 | 8.4:+26237474 | MS.gene99221:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACATTCTGATAAGATAATA+AGG | + | chr8.4:26237441-26237460 | MS.gene99221:CDS | 20.0% |
!!! | TTTGTTTAAGATGGTTTATA+TGG | - | chr8.4:26236587-26236606 | None:intergenic | 20.0% |
! | AAGAATCTTTCATTTCACAA+AGG | + | chr8.4:26237115-26237134 | MS.gene99221:CDS | 25.0% |
! | AGAAAATTGAATTAACACCA+TGG | + | chr8.4:26236487-26236506 | MS.gene99221:CDS | 25.0% |
! | ATTGGAATTTCAATATCGTT+TGG | - | chr8.4:26237020-26237039 | None:intergenic | 25.0% |
! | GAAAATTGAATTAACACCAT+GGG | + | chr8.4:26236488-26236507 | MS.gene99221:CDS | 25.0% |
! | TGTGAAATGAAAGATTCTTT+CGG | - | chr8.4:26237114-26237133 | None:intergenic | 25.0% |
! | TTAAGATGGTTTATATGGTT+TGG | - | chr8.4:26236582-26236601 | None:intergenic | 25.0% |
! | TTGGAATTTCAATATCGTTT+GGG | - | chr8.4:26237019-26237038 | None:intergenic | 25.0% |
!! | TTGTCTTTCTTATGAGATTT+TGG | + | chr8.4:26237685-26237704 | MS.gene99221:CDS | 25.0% |
!!! | GTTTCTTATGTGTTGTTTAT+AGG | + | chr8.4:26237275-26237294 | MS.gene99221:CDS | 25.0% |
AAAACAGAATCACAAAACCA+AGG | + | chr8.4:26237056-26237075 | MS.gene99221:CDS | 30.0% | |
ACATAAGAAACATCTTCTTG+TGG | - | chr8.4:26237266-26237285 | None:intergenic | 30.0% | |
TTTGGCATTTCGTTAATTCA+TGG | + | chr8.4:26236934-26236953 | MS.gene99221:CDS | 30.0% | |
! | GGATTGGTAACAAGTATAAT+GGG | + | chr8.4:26237612-26237631 | MS.gene99221:CDS | 30.0% |
! | TCTTTCTTATGAGATTTTGG+AGG | + | chr8.4:26237688-26237707 | MS.gene99221:CDS | 30.0% |
! | TTGTGATTGTTGTTGTCAAT+TGG | - | chr8.4:26236453-26236472 | None:intergenic | 30.0% |
!! | AAGGGAGTTTTGATATTTTG+TGG | - | chr8.4:26236980-26236999 | None:intergenic | 30.0% |
!! | AGGAAAGTGTTTGTTTAAGA+TGG | - | chr8.4:26236596-26236615 | None:intergenic | 30.0% |
!! | AGGGAGTTTTGATATTTTGT+GGG | - | chr8.4:26236979-26236998 | None:intergenic | 30.0% |
!! | ATATGGTTTGGTATTGGAAT+GGG | - | chr8.4:26236570-26236589 | None:intergenic | 30.0% |
!! | TATATGGTTTGGTATTGGAA+TGG | - | chr8.4:26236571-26236590 | None:intergenic | 30.0% |
!! | TGGTTTATATGGTTTGGTAT+TGG | - | chr8.4:26236576-26236595 | None:intergenic | 30.0% |
!! | TTTTTGGCAATGATTTTGGT+TGG | + | chr8.4:26237564-26237583 | MS.gene99221:CDS | 30.0% |
!!! | GATGTTTTTGGCAATGATTT+TGG | + | chr8.4:26237560-26237579 | MS.gene99221:CDS | 30.0% |
!!! | GTGATTCTGTTTTTGTGAAA+GGG | - | chr8.4:26237049-26237068 | None:intergenic | 30.0% |
!!! | TGTGATTCTGTTTTTGTGAA+AGG | - | chr8.4:26237050-26237069 | None:intergenic | 30.0% |
!!! | TTTTGGCAATGATTTTGGTT+GGG | + | chr8.4:26237565-26237584 | MS.gene99221:CDS | 30.0% |
AAAAATGAGTGGACAATTGG+AGG | - | chr8.4:26236786-26236805 | None:intergenic | 35.0% | |
AAAGATTCTTTCGGCTAACT+TGG | - | chr8.4:26237105-26237124 | None:intergenic | 35.0% | |
ATTGCTAACGAATTACCACT+TGG | - | chr8.4:26237521-26237540 | None:intergenic | 35.0% | |
GAGGTGTATAGTTTGATTGA+AGG | - | chr8.4:26236767-26236786 | None:intergenic | 35.0% | |
GGAAAAAATGAGTGGACAAT+TGG | - | chr8.4:26236789-26236808 | None:intergenic | 35.0% | |
GGATTCTAAGCTTTCTTCTA+AGG | - | chr8.4:26237084-26237103 | None:intergenic | 35.0% | |
GGTTAAGTGGAAAAAATGAG+TGG | - | chr8.4:26236797-26236816 | None:intergenic | 35.0% | |
TAAGGAATCATTACGAGTCT+TGG | + | chr8.4:26237459-26237478 | MS.gene99221:CDS | 35.0% | |
TCATGGTCACAAATCTCAAA+AGG | + | chr8.4:26236951-26236970 | MS.gene99221:CDS | 35.0% | |
TCCGAAATAATCCTCTTCTA+GGG | - | chr8.4:26237324-26237343 | None:intergenic | 35.0% | |
TGTTTATAGGTGTTAGACCA+AGG | + | chr8.4:26237288-26237307 | MS.gene99221:CDS | 35.0% | |
TTCCGAAATAATCCTCTTCT+AGG | - | chr8.4:26237325-26237344 | None:intergenic | 35.0% | |
TTGCCAAAAACATCAAACCT+TGG | - | chr8.4:26237554-26237573 | None:intergenic | 35.0% | |
TTTCACAAAGGAGAAAATCG+CGG | + | chr8.4:26237127-26237146 | MS.gene99221:CDS | 35.0% | |
! | AATTGGTGCTTGAATTGTAC+TGG | - | chr8.4:26236436-26236455 | None:intergenic | 35.0% |
! | GGGATTGGTAACAAGTATAA+TGG | + | chr8.4:26237611-26237630 | MS.gene99221:CDS | 35.0% |
! | TGTCCAAGGTTTGATGTTTT+TGG | + | chr8.4:26237548-26237567 | MS.gene99221:CDS | 35.0% |
! | TTTGTGAAAGGGAAGTGTAT+TGG | - | chr8.4:26237038-26237057 | None:intergenic | 35.0% |
!! | TATGAGATTTTGGAGGCTTT+GGG | + | chr8.4:26237695-26237714 | MS.gene99221:CDS | 35.0% |
!! | TTATGAGATTTTGGAGGCTT+TGG | + | chr8.4:26237694-26237713 | MS.gene99221:CDS | 35.0% |
!!! | TTTGGCAATGATTTTGGTTG+GGG | + | chr8.4:26237566-26237585 | MS.gene99221:CDS | 35.0% |
AACTCCCTTCATTTCAACGT+TGG | + | chr8.4:26236991-26237010 | MS.gene99221:CDS | 40.0% | |
AAGCGCTATTATCTCACGTT+TGG | + | chr8.4:26237210-26237229 | MS.gene99221:CDS | 40.0% | |
ACCAAGGTTGTTGCAAATGA+TGG | - | chr8.4:26236697-26236716 | None:intergenic | 40.0% | |
AGTCTTGGTTAAGAACACCA+AGG | + | chr8.4:26237474-26237493 | MS.gene99221:CDS | 40.0% | |
CCCCTAGAAGAGGATTATTT+CGG | + | chr8.4:26237320-26237339 | MS.gene99221:CDS | 40.0% | |
CCGAAATAATCCTCTTCTAG+GGG | - | chr8.4:26237323-26237342 | None:intergenic | 40.0% | |
GAAACATCTTCTTGTGGATC+AGG | - | chr8.4:26237260-26237279 | None:intergenic | 40.0% | |
GGAACCAACGTTGAAATGAA+GGG | - | chr8.4:26236998-26237017 | None:intergenic | 40.0% | |
GGGAAAATTACAGTGTTTGC+TGG | + | chr8.4:26237632-26237651 | MS.gene99221:CDS | 40.0% | |
GTTCCACTTCCAAGTTCTAT+GGG | + | chr8.4:26237744-26237763 | MS.gene99221:CDS | 40.0% | |
TAGAACTTGGAAGTGGAACA+TGG | - | chr8.4:26237743-26237762 | None:intergenic | 40.0% | |
TCCATCATTTGCAACAACCT+TGG | + | chr8.4:26236693-26236712 | MS.gene99221:CDS | 40.0% | |
TGCCACAGTGCAAAATACAA+CGG | + | chr8.4:26236731-26236750 | MS.gene99221:CDS | 40.0% | |
TGGAATCGGAAAAGTTGCTT+TGG | + | chr8.4:26237397-26237416 | MS.gene99221:CDS | 40.0% | |
TGGTTTCAAGATGGAGGAAT+TGG | - | chr8.4:26236518-26236537 | None:intergenic | 40.0% | |
TGTTCCACTTCCAAGTTCTA+TGG | + | chr8.4:26237743-26237762 | MS.gene99221:CDS | 40.0% | |
TTTCCCATAGAACTTGGAAG+TGG | - | chr8.4:26237750-26237769 | None:intergenic | 40.0% | |
! | AAATAATCCTCTTCTAGGGG+CGG | - | chr8.4:26237320-26237339 | None:intergenic | 40.0% |
! | AGGTTTTTCGCAACGAACAA+CGG | - | chr8.4:26237240-26237259 | None:intergenic | 40.0% |
! | AGTTTTCTCTGTTCCAGCTT+CGG | - | chr8.4:26237174-26237193 | None:intergenic | 40.0% |
! | CAGCTTCATGGTTTTTAACG+CGG | - | chr8.4:26236818-26236837 | None:intergenic | 40.0% |
! | GTTGCAAATGATGGAACATG+TGG | - | chr8.4:26236688-26236707 | None:intergenic | 40.0% |
! | TGGTTTTTAACGCGGTTAAG+TGG | - | chr8.4:26236810-26236829 | None:intergenic | 40.0% |
! | TTGTATTTTGCACTGTGGCA+TGG | - | chr8.4:26236731-26236750 | None:intergenic | 40.0% |
!! | ATGAGATTTTGGAGGCTTTG+GGG | + | chr8.4:26237696-26237715 | MS.gene99221:CDS | 40.0% |
!! | GAGGTTCTAGAGTATGGAAT+CGG | + | chr8.4:26237383-26237402 | MS.gene99221:CDS | 40.0% |
!! | TAGCAATCACTTGTTGTCCA+AGG | + | chr8.4:26237534-26237553 | MS.gene99221:CDS | 40.0% |
!! | TTGGTATTGGAATGGGTTGT+TGG | - | chr8.4:26236563-26236582 | None:intergenic | 40.0% |
ACTGGTGGAGATCACTTTGA+TGG | - | chr8.4:26236418-26236437 | None:intergenic | 45.0% | |
ACTGTTGTGAGGATGAAAGC+AGG | + | chr8.4:26237359-26237378 | MS.gene99221:CDS | 45.0% | |
AGTGCAAAATACAACGGTCG+TGG | + | chr8.4:26236737-26236756 | MS.gene99221:CDS | 45.0% | |
CATCTTGAAACCATCCAAGC+AGG | + | chr8.4:26236525-26236544 | MS.gene99221:CDS | 45.0% | |
CTACCACTTGGAAACAACCT+TGG | - | chr8.4:26237494-26237513 | None:intergenic | 45.0% | |
CTGCTTGGATGGTTTCAAGA+TGG | - | chr8.4:26236527-26236546 | None:intergenic | 45.0% | |
CTTGGATGGTTTCAAGATGG+AGG | - | chr8.4:26236524-26236543 | None:intergenic | 45.0% | |
GCTAACGAATTACCACTTGG+AGG | - | chr8.4:26237518-26237537 | None:intergenic | 45.0% | |
GGATTATTTCGGAAACGCAG+TGG | + | chr8.4:26237331-26237350 | MS.gene99221:CDS | 45.0% | |
GGGAACCAACGTTGAAATGA+AGG | - | chr8.4:26236999-26237018 | None:intergenic | 45.0% | |
TATTACAAGACGACCAGCGA+GGG | - | chr8.4:26236640-26236659 | None:intergenic | 45.0% | |
TGGTGCTTGAATTGTACTGG+TGG | - | chr8.4:26236433-26236452 | None:intergenic | 45.0% | |
TTAAGTGACGGCGTCTTCAT+TGG | + | chr8.4:26236873-26236892 | MS.gene99221:CDS | 45.0% | |
TTATTACAAGACGACCAGCG+AGG | - | chr8.4:26236641-26236660 | None:intergenic | 45.0% | |
TTATTTCGGAAACGCAGTGG+TGG | + | chr8.4:26237334-26237353 | MS.gene99221:CDS | 45.0% | |
TTGGTTGTGACACAGCTTCA+TGG | - | chr8.4:26236830-26236849 | None:intergenic | 45.0% | |
! | AACTCTAGGAGTCCAGGTAA+CGG | + | chr8.4:26236848-26236867 | MS.gene99221:CDS | 45.0% |
! | ACACCAAGGTTGTTTCCAAG+TGG | + | chr8.4:26237488-26237507 | MS.gene99221:CDS | 45.0% |
! | AGCTTTCTTCTAAGGAGCCT+TGG | - | chr8.4:26237076-26237095 | None:intergenic | 45.0% |
! | GACCGTTGTATTTTGCACTG+TGG | - | chr8.4:26236736-26236755 | None:intergenic | 45.0% |
! | TGGGTTGTTGGTGGAAAAGA+AGG | - | chr8.4:26236551-26236570 | None:intergenic | 45.0% |
!! | CAGGTAACGGAGTTAAGTGA+CGG | + | chr8.4:26236861-26236880 | MS.gene99221:CDS | 45.0% |
!! | GTATTGGAATGGGTTGTTGG+TGG | - | chr8.4:26236560-26236579 | None:intergenic | 45.0% |
ATTACAAGACGACCAGCGAG+GGG | - | chr8.4:26236639-26236658 | None:intergenic | 50.0% | |
CAGTGGTGGTTACTGTTGTG+AGG | + | chr8.4:26237348-26237367 | MS.gene99221:CDS | 50.0% | |
CATGGACGAATAGTGCACCA+AGG | - | chr8.4:26236713-26236732 | None:intergenic | 50.0% | |
CGTCACTTAACTCCGTTACC+TGG | - | chr8.4:26236863-26236882 | None:intergenic | 50.0% | |
GAAAAGAAGGCCTGCTTGGA+TGG | - | chr8.4:26236538-26236557 | None:intergenic | 50.0% | |
GAGGGGTGGAAAGAAGTTGA+GGG | - | chr8.4:26236622-26236641 | None:intergenic | 50.0% | |
GCTGTGTCACAACCAACTCT+AGG | + | chr8.4:26236834-26236853 | MS.gene99221:CDS | 50.0% | |
GGGGAATGACACTGAGTTCA+TGG | + | chr8.4:26237715-26237734 | MS.gene99221:CDS | 50.0% | |
GTTACCTGGACTCCTAGAGT+TGG | - | chr8.4:26236849-26236868 | None:intergenic | 50.0% | |
TCAAAAGCAAACGCCGAAGC+TGG | + | chr8.4:26237158-26237177 | MS.gene99221:CDS | 50.0% | |
TGCAACCACGTTGTTGCAGA+CGG | + | chr8.4:26236903-26236922 | MS.gene99221:CDS | 50.0% | |
TGGAAAGAAGTTGAGGGTGG+AGG | - | chr8.4:26236616-26236635 | None:intergenic | 50.0% | |
TGGAGGAATTGGAGATCCCA+TGG | - | chr8.4:26236507-26236526 | None:intergenic | 50.0% | |
TGTGAGGATGAAAGCAGGAG+AGG | + | chr8.4:26237364-26237383 | MS.gene99221:CDS | 50.0% | |
! | ACAACCAACTCTAGGAGTCC+AGG | + | chr8.4:26236842-26236861 | MS.gene99221:CDS | 50.0% |
! | GTGTTTGCTGGTGCTGAAGA+AGG | + | chr8.4:26237644-26237663 | MS.gene99221:CDS | 50.0% |
! | TTGCAGACGGCAAGTCGTTT+TGG | + | chr8.4:26236916-26236935 | MS.gene99221:CDS | 50.0% |
!! | GCAGGAGAGGTTCTAGAGTA+TGG | + | chr8.4:26237377-26237396 | MS.gene99221:CDS | 50.0% |
!! | TTTTGGTTGGGGAAAGCCTG+TGG | + | chr8.4:26237577-26237596 | MS.gene99221:CDS | 50.0% |
AACTTCTTTCCACCCCTCGC+TGG | + | chr8.4:26236624-26236643 | MS.gene99221:CDS | 55.0% | |
AAGCCTGTGGCAGTTCGAAG+TGG | + | chr8.4:26237590-26237609 | MS.gene99221:CDS | 55.0% | |
ACTTGCCGTCTGCAACAACG+TGG | - | chr8.4:26236911-26236930 | None:intergenic | 55.0% | |
AGCCTGTGGCAGTTCGAAGT+GGG | + | chr8.4:26237591-26237610 | MS.gene99221:CDS | 55.0% | |
ATCCCACTTCGAACTGCCAC+AGG | - | chr8.4:26237596-26237615 | None:intergenic | 55.0% | |
CCAAGTGGTAGTCCTCCAAG+TGG | + | chr8.4:26237503-26237522 | MS.gene99221:CDS | 55.0% | |
CCACTTGGAGGACTACCACT+TGG | - | chr8.4:26237506-26237525 | None:intergenic | 55.0% | |
CGAGGGGTGGAAAGAAGTTG+AGG | - | chr8.4:26236623-26236642 | None:intergenic | 55.0% | |
GGGTGGAAAGAAGTTGAGGG+TGG | - | chr8.4:26236619-26236638 | None:intergenic | 55.0% | |
GGTGGAAAAGAAGGCCTGCT+TGG | - | chr8.4:26236542-26236561 | None:intergenic | 55.0% | |
GTGGCAGTTCGAAGTGGGAT+TGG | + | chr8.4:26237596-26237615 | MS.gene99221:CDS | 55.0% | |
TCTAGGGGCGGAATCAACCT+TGG | - | chr8.4:26237308-26237327 | None:intergenic | 55.0% | |
! | GTTGATTCCGCCCCTAGAAG+AGG | + | chr8.4:26237310-26237329 | MS.gene99221:CDS | 55.0% |
ACAAGACGACCAGCGAGGGG+TGG | - | chr8.4:26236636-26236655 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 26236408 | 26237772 | 26236408 | ID=MS.gene99221 |
chr8.4 | mRNA | 26236408 | 26237772 | 26236408 | ID=MS.gene99221.t1;Parent=MS.gene99221 |
chr8.4 | exon | 26236408 | 26237772 | 26236408 | ID=MS.gene99221.t1.exon1;Parent=MS.gene99221.t1 |
chr8.4 | CDS | 26236408 | 26237772 | 26236408 | ID=cds.MS.gene99221.t1;Parent=MS.gene99221.t1 |
Gene Sequence |
Protein sequence |