Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50420.t1 | RHN59148.1 | 83.3 | 450 | 68 | 2 | 1 | 450 | 40 | 482 | 6.70E-213 | 750 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50420.t1 | Q9SND9 | 35.4 | 421 | 245 | 9 | 29 | 438 | 25 | 429 | 9.8e-64 | 245.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50420.t1 | G7JUI6 | 83.3 | 450 | 68 | 2 | 1 | 450 | 1 | 443 | 4.8e-213 | 750.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051131 | MS.gene50420 | 0.815267 | 1.01E-51 | -1.69E-46 |
MS.gene054277 | MS.gene50420 | 0.835904 | 1.28E-56 | -1.69E-46 |
MS.gene056715 | MS.gene50420 | 0.814518 | 1.48E-51 | -1.69E-46 |
MS.gene056920 | MS.gene50420 | 0.808656 | 2.78E-50 | -1.69E-46 |
MS.gene058450 | MS.gene50420 | 0.805284 | 1.44E-49 | -1.69E-46 |
MS.gene059953 | MS.gene50420 | 0.802232 | 6.19E-49 | -1.69E-46 |
MS.gene059955 | MS.gene50420 | 0.809064 | 2.28E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50420.t1 | MTR_4g022290 | 86.000 | 450 | 56 | 2 | 1 | 450 | 1 | 443 | 0.0 | 785 |
MS.gene50420.t1 | MTR_4g094828 | 80.786 | 458 | 68 | 4 | 1 | 449 | 1 | 447 | 0.0 | 749 |
MS.gene50420.t1 | MTR_8g079710 | 74.009 | 454 | 103 | 8 | 1 | 450 | 1 | 443 | 0.0 | 660 |
MS.gene50420.t1 | MTR_4g094835 | 53.392 | 457 | 189 | 10 | 1 | 448 | 1 | 442 | 3.69e-166 | 476 |
MS.gene50420.t1 | MTR_4g094842 | 51.948 | 462 | 184 | 8 | 1 | 445 | 1 | 441 | 1.17e-159 | 459 |
MS.gene50420.t1 | MTR_0190s0020 | 49.563 | 458 | 203 | 7 | 1 | 449 | 1 | 439 | 4.45e-153 | 442 |
MS.gene50420.t1 | MTR_4g094838 | 50.221 | 452 | 186 | 9 | 4 | 444 | 1 | 424 | 2.07e-146 | 425 |
MS.gene50420.t1 | MTR_4g022800 | 49.679 | 467 | 189 | 11 | 1 | 449 | 1 | 439 | 2.57e-146 | 425 |
MS.gene50420.t1 | MTR_4g022670 | 49.142 | 466 | 192 | 11 | 1 | 449 | 1 | 438 | 6.92e-146 | 424 |
MS.gene50420.t1 | MTR_3g026310 | 49.269 | 479 | 189 | 13 | 1 | 455 | 1 | 449 | 8.65e-146 | 424 |
MS.gene50420.t1 | MTR_4g022825 | 49.892 | 465 | 189 | 12 | 1 | 449 | 1 | 437 | 1.98e-145 | 422 |
MS.gene50420.t1 | MTR_4g022720 | 49.783 | 460 | 192 | 11 | 1 | 449 | 1 | 432 | 1.10e-144 | 421 |
MS.gene50420.t1 | MTR_8g041770 | 49.345 | 458 | 203 | 10 | 1 | 449 | 1 | 438 | 2.68e-144 | 420 |
MS.gene50420.t1 | MTR_7g026860 | 49.032 | 465 | 191 | 11 | 1 | 449 | 1 | 435 | 7.15e-143 | 416 |
MS.gene50420.t1 | MTR_3g088420 | 49.241 | 461 | 191 | 12 | 1 | 449 | 1 | 430 | 1.78e-142 | 415 |
MS.gene50420.t1 | MTR_4g094832 | 55.236 | 382 | 143 | 8 | 75 | 444 | 57 | 422 | 4.77e-139 | 406 |
MS.gene50420.t1 | MTR_4g022760 | 43.871 | 465 | 174 | 10 | 1 | 449 | 1 | 394 | 2.23e-118 | 352 |
MS.gene50420.t1 | MTR_6g016815 | 40.570 | 456 | 174 | 11 | 1 | 450 | 15 | 379 | 1.42e-99 | 303 |
MS.gene50420.t1 | MTR_3g101900 | 35.227 | 440 | 247 | 11 | 30 | 454 | 29 | 445 | 4.04e-80 | 256 |
MS.gene50420.t1 | MTR_3g101930 | 36.062 | 452 | 240 | 14 | 27 | 454 | 26 | 452 | 2.84e-79 | 253 |
MS.gene50420.t1 | MTR_3g102010 | 36.000 | 450 | 250 | 13 | 27 | 457 | 26 | 456 | 1.73e-77 | 249 |
MS.gene50420.t1 | MTR_3g101960 | 35.909 | 440 | 242 | 13 | 25 | 444 | 23 | 442 | 1.75e-76 | 246 |
MS.gene50420.t1 | MTR_3g102020 | 35.714 | 448 | 247 | 14 | 25 | 451 | 23 | 450 | 6.13e-76 | 245 |
MS.gene50420.t1 | MTR_3g101970 | 35.202 | 446 | 236 | 14 | 25 | 450 | 23 | 435 | 6.91e-76 | 244 |
MS.gene50420.t1 | MTR_8g040760 | 54.338 | 219 | 90 | 4 | 1 | 214 | 1 | 214 | 2.72e-74 | 233 |
MS.gene50420.t1 | MTR_5g081960 | 33.056 | 481 | 249 | 13 | 29 | 456 | 25 | 485 | 1.41e-68 | 226 |
MS.gene50420.t1 | MTR_3g070170 | 32.088 | 455 | 263 | 11 | 21 | 444 | 23 | 462 | 9.99e-63 | 211 |
MS.gene50420.t1 | MTR_4g015180 | 33.827 | 473 | 248 | 17 | 24 | 444 | 20 | 479 | 2.69e-62 | 210 |
MS.gene50420.t1 | MTR_4g094825 | 56.150 | 187 | 74 | 5 | 24 | 204 | 85 | 269 | 1.07e-61 | 206 |
MS.gene50420.t1 | MTR_4g094825 | 47.945 | 146 | 62 | 4 | 300 | 444 | 251 | 383 | 9.11e-33 | 128 |
MS.gene50420.t1 | MTR_7g026850 | 61.146 | 157 | 58 | 3 | 30 | 185 | 7 | 161 | 1.73e-60 | 196 |
MS.gene50420.t1 | MTR_6g034495 | 66.379 | 116 | 37 | 1 | 72 | 185 | 45 | 160 | 1.82e-46 | 159 |
MS.gene50420.t1 | MTR_8g040780 | 40.664 | 241 | 123 | 5 | 208 | 445 | 2 | 225 | 2.24e-46 | 161 |
MS.gene50420.t1 | MTR_3g102030 | 30.925 | 346 | 185 | 12 | 72 | 405 | 17 | 320 | 6.49e-41 | 149 |
MS.gene50420.t1 | MTR_6g045553 | 28.821 | 458 | 265 | 13 | 27 | 444 | 31 | 467 | 1.53e-37 | 143 |
MS.gene50420.t1 | MTR_7g026770 | 42.553 | 188 | 78 | 4 | 148 | 335 | 132 | 289 | 3.31e-36 | 135 |
MS.gene50420.t1 | MTR_7g026830 | 70.732 | 82 | 24 | 0 | 91 | 172 | 16 | 97 | 3.96e-35 | 126 |
MS.gene50420.t1 | MTR_6g034485 | 41.135 | 141 | 63 | 3 | 193 | 329 | 1 | 125 | 1.85e-27 | 106 |
MS.gene50420.t1 | MTR_8g075610 | 26.055 | 403 | 244 | 16 | 61 | 443 | 47 | 415 | 3.77e-27 | 113 |
MS.gene50420.t1 | MTR_2g105330 | 25.592 | 422 | 255 | 18 | 48 | 443 | 39 | 427 | 5.17e-25 | 107 |
MS.gene50420.t1 | MTR_2g064495 | 25.592 | 422 | 255 | 18 | 48 | 443 | 39 | 427 | 7.27e-25 | 106 |
MS.gene50420.t1 | MTR_4g007540 | 25.476 | 420 | 259 | 17 | 48 | 443 | 39 | 428 | 2.27e-24 | 105 |
MS.gene50420.t1 | MTR_5g026320 | 25.678 | 479 | 289 | 20 | 3 | 453 | 17 | 456 | 4.48e-24 | 104 |
MS.gene50420.t1 | MTR_1g040175 | 24.586 | 423 | 266 | 17 | 36 | 441 | 46 | 432 | 7.33e-21 | 95.1 |
MS.gene50420.t1 | MTR_3g049150 | 24.186 | 430 | 252 | 16 | 48 | 437 | 38 | 433 | 7.37e-21 | 95.1 |
MS.gene50420.t1 | MTR_7g027175 | 23.325 | 403 | 272 | 13 | 51 | 443 | 58 | 433 | 9.41e-21 | 94.7 |
MS.gene50420.t1 | MTR_4g097090 | 23.884 | 448 | 259 | 18 | 31 | 433 | 30 | 440 | 2.32e-20 | 93.6 |
MS.gene50420.t1 | MTR_8g096530 | 25.490 | 357 | 216 | 14 | 61 | 400 | 59 | 382 | 7.98e-20 | 92.0 |
MS.gene50420.t1 | MTR_3g026950 | 25.170 | 441 | 259 | 19 | 37 | 437 | 28 | 437 | 1.39e-19 | 91.3 |
MS.gene50420.t1 | MTR_2g089765 | 24.537 | 432 | 234 | 19 | 28 | 400 | 36 | 434 | 1.89e-19 | 91.3 |
MS.gene50420.t1 | MTR_7g085930 | 25.058 | 431 | 267 | 15 | 51 | 444 | 49 | 460 | 2.62e-19 | 90.5 |
MS.gene50420.t1 | MTR_1g040195 | 24.887 | 442 | 268 | 17 | 32 | 455 | 23 | 418 | 3.73e-19 | 89.7 |
MS.gene50420.t1 | MTR_6g015815 | 23.478 | 460 | 262 | 17 | 31 | 441 | 34 | 452 | 9.12e-18 | 85.9 |
MS.gene50420.t1 | MTR_1g081660 | 24.460 | 417 | 230 | 17 | 31 | 408 | 31 | 401 | 1.52e-17 | 85.1 |
MS.gene50420.t1 | MTR_6g015830 | 25.672 | 409 | 241 | 17 | 31 | 403 | 34 | 415 | 2.02e-17 | 84.7 |
MS.gene50420.t1 | MTR_3g098980 | 22.139 | 402 | 257 | 13 | 61 | 443 | 66 | 430 | 3.00e-17 | 84.0 |
MS.gene50420.t1 | MTR_7g014200 | 23.297 | 455 | 281 | 16 | 29 | 439 | 28 | 458 | 3.39e-17 | 84.3 |
MS.gene50420.t1 | MTR_3g028210 | 23.326 | 463 | 292 | 15 | 31 | 458 | 31 | 465 | 1.60e-16 | 82.0 |
MS.gene50420.t1 | MTR_3g087640 | 23.503 | 451 | 279 | 18 | 36 | 439 | 31 | 462 | 3.96e-16 | 80.9 |
MS.gene50420.t1 | MTR_7g114470 | 23.409 | 440 | 265 | 21 | 32 | 434 | 25 | 429 | 4.21e-16 | 80.9 |
MS.gene50420.t1 | MTR_4g127650 | 23.114 | 411 | 242 | 18 | 61 | 433 | 66 | 440 | 4.25e-16 | 80.9 |
MS.gene50420.t1 | MTR_7g014330 | 23.632 | 402 | 265 | 15 | 31 | 404 | 26 | 413 | 5.43e-16 | 80.5 |
MS.gene50420.t1 | MTR_4g013050 | 23.457 | 405 | 219 | 16 | 59 | 433 | 51 | 394 | 1.73e-15 | 78.6 |
MS.gene50420.t1 | MTR_8g012750 | 24.703 | 421 | 248 | 17 | 28 | 400 | 23 | 422 | 1.85e-15 | 79.0 |
MS.gene50420.t1 | MTR_5g084870 | 24.834 | 451 | 271 | 19 | 3 | 430 | 2 | 407 | 2.17e-15 | 78.6 |
MS.gene50420.t1 | MTR_6g015320 | 24.439 | 401 | 255 | 17 | 31 | 403 | 29 | 409 | 2.47e-15 | 78.2 |
MS.gene50420.t1 | MTR_5g090880 | 24.282 | 383 | 215 | 14 | 61 | 402 | 67 | 415 | 3.95e-15 | 77.8 |
MS.gene50420.t1 | MTR_7g014250 | 23.267 | 404 | 256 | 16 | 35 | 404 | 30 | 413 | 1.05e-14 | 76.3 |
MS.gene50420.t1 | MTR_3g086020 | 25.822 | 426 | 243 | 19 | 30 | 431 | 22 | 398 | 1.23e-14 | 75.9 |
MS.gene50420.t1 | MTR_6g015850 | 24.272 | 412 | 240 | 14 | 31 | 403 | 34 | 412 | 1.67e-14 | 75.9 |
MS.gene50420.t1 | MTR_1g040320 | 24.155 | 414 | 235 | 17 | 56 | 455 | 59 | 407 | 3.46e-14 | 74.7 |
MS.gene50420.t1 | MTR_2g089755 | 24.939 | 409 | 258 | 17 | 31 | 403 | 37 | 432 | 6.95e-14 | 73.9 |
MS.gene50420.t1 | MTR_5g090810 | 22.927 | 410 | 236 | 13 | 39 | 401 | 36 | 412 | 9.10e-14 | 73.6 |
MS.gene50420.t1 | MTR_3g112180 | 26.000 | 300 | 181 | 11 | 35 | 318 | 38 | 312 | 1.68e-13 | 72.8 |
MS.gene50420.t1 | MTR_7g014610 | 22.319 | 457 | 281 | 17 | 34 | 439 | 32 | 465 | 1.99e-13 | 72.4 |
MS.gene50420.t1 | MTR_8g079980 | 22.581 | 372 | 226 | 13 | 54 | 403 | 52 | 383 | 4.44e-13 | 71.2 |
MS.gene50420.t1 | MTR_6g053810 | 25.989 | 354 | 221 | 15 | 61 | 396 | 71 | 401 | 1.12e-12 | 70.1 |
MS.gene50420.t1 | MTR_4g055170 | 25.256 | 293 | 185 | 10 | 61 | 340 | 69 | 340 | 1.83e-12 | 69.3 |
MS.gene50420.t1 | MTR_5g090830 | 22.683 | 410 | 237 | 14 | 39 | 401 | 36 | 412 | 2.14e-12 | 69.3 |
MS.gene50420.t1 | MTR_7g114560 | 28.962 | 183 | 105 | 8 | 32 | 198 | 24 | 197 | 7.51e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50420.t1 | AT5G67150 | 37.802 | 455 | 250 | 12 | 3 | 444 | 4 | 438 | 6.05e-95 | 294 |
MS.gene50420.t1 | AT3G50300 | 37.660 | 470 | 248 | 14 | 1 | 450 | 1 | 445 | 4.26e-88 | 276 |
MS.gene50420.t1 | AT3G50270 | 35.903 | 454 | 259 | 10 | 4 | 444 | 6 | 440 | 4.31e-84 | 266 |
MS.gene50420.t1 | AT5G67160 | 37.089 | 426 | 234 | 10 | 27 | 444 | 25 | 424 | 6.26e-82 | 260 |
MS.gene50420.t1 | AT5G38130 | 36.508 | 441 | 253 | 11 | 1 | 433 | 21 | 442 | 1.18e-80 | 257 |
MS.gene50420.t1 | AT3G50280 | 34.573 | 457 | 264 | 11 | 1 | 444 | 1 | 435 | 2.96e-80 | 256 |
MS.gene50420.t1 | AT5G42830 | 35.648 | 432 | 242 | 13 | 30 | 444 | 29 | 441 | 4.45e-76 | 245 |
MS.gene50420.t1 | AT5G07850 | 35.023 | 434 | 245 | 11 | 30 | 444 | 30 | 445 | 1.63e-72 | 236 |
MS.gene50420.t1 | AT5G07860 | 35.566 | 433 | 240 | 10 | 30 | 444 | 30 | 441 | 5.41e-72 | 234 |
MS.gene50420.t1 | AT2G39980 | 32.983 | 476 | 265 | 12 | 11 | 444 | 9 | 472 | 2.44e-69 | 228 |
MS.gene50420.t1 | AT5G01210 | 33.261 | 460 | 258 | 11 | 24 | 448 | 20 | 465 | 4.65e-69 | 228 |
MS.gene50420.t1 | AT5G07870 | 35.177 | 452 | 244 | 15 | 30 | 451 | 30 | 462 | 5.77e-64 | 214 |
MS.gene50420.t1 | AT3G50280 | 34.891 | 321 | 185 | 7 | 132 | 444 | 1 | 305 | 1.88e-53 | 182 |
MS.gene50420.t1 | AT5G23940 | 30.926 | 443 | 256 | 12 | 27 | 441 | 21 | 441 | 7.56e-49 | 174 |
MS.gene50420.t1 | AT3G50290 | 38.380 | 284 | 149 | 7 | 126 | 398 | 1 | 269 | 7.90e-49 | 168 |
MS.gene50420.t1 | AT5G41040 | 27.000 | 400 | 249 | 15 | 58 | 443 | 66 | 436 | 1.47e-25 | 108 |
MS.gene50420.t1 | AT5G41040 | 27.000 | 400 | 249 | 15 | 58 | 443 | 82 | 452 | 1.57e-25 | 108 |
MS.gene50420.t1 | AT5G48930 | 25.547 | 411 | 250 | 17 | 48 | 433 | 39 | 418 | 2.66e-22 | 99.4 |
MS.gene50420.t1 | AT3G48720 | 26.066 | 422 | 261 | 17 | 41 | 443 | 37 | 426 | 9.32e-22 | 97.8 |
MS.gene50420.t1 | AT5G63560 | 24.936 | 393 | 236 | 15 | 61 | 434 | 61 | 413 | 2.36e-20 | 93.6 |
MS.gene50420.t1 | AT5G57840 | 25.476 | 420 | 243 | 18 | 48 | 433 | 39 | 422 | 5.62e-19 | 89.4 |
MS.gene50420.t1 | AT2G19070 | 25.902 | 471 | 261 | 21 | 25 | 442 | 9 | 444 | 2.48e-18 | 87.4 |
MS.gene50420.t1 | AT3G29590 | 23.007 | 439 | 280 | 15 | 31 | 439 | 28 | 438 | 5.00e-18 | 86.7 |
MS.gene50420.t1 | AT1G78990 | 25.867 | 375 | 221 | 14 | 50 | 401 | 56 | 396 | 1.69e-17 | 85.1 |
MS.gene50420.t1 | AT3G26040 | 27.679 | 448 | 245 | 21 | 30 | 444 | 20 | 421 | 1.77e-17 | 84.7 |
MS.gene50420.t1 | AT3G03480 | 25.227 | 440 | 264 | 18 | 32 | 439 | 33 | 439 | 1.79e-17 | 85.1 |
MS.gene50420.t1 | AT5G17540 | 23.971 | 413 | 236 | 16 | 32 | 408 | 23 | 393 | 5.63e-17 | 83.6 |
MS.gene50420.t1 | AT1G32910 | 24.661 | 369 | 216 | 13 | 61 | 401 | 65 | 399 | 1.78e-16 | 82.0 |
MS.gene50420.t1 | AT5G07080 | 23.775 | 408 | 242 | 15 | 61 | 438 | 70 | 438 | 1.21e-15 | 79.3 |
MS.gene50420.t1 | AT5G47950 | 23.618 | 398 | 247 | 14 | 57 | 442 | 57 | 409 | 9.72e-15 | 76.3 |
MS.gene50420.t1 | AT5G39080 | 24.374 | 439 | 275 | 16 | 31 | 433 | 28 | 445 | 1.55e-14 | 75.9 |
MS.gene50420.t1 | AT5G16410 | 23.499 | 383 | 224 | 13 | 48 | 401 | 77 | 419 | 1.97e-14 | 75.9 |
MS.gene50420.t1 | AT5G23970 | 23.877 | 423 | 250 | 17 | 47 | 444 | 38 | 413 | 8.09e-14 | 73.6 |
MS.gene50420.t1 | AT1G24420 | 25.581 | 344 | 206 | 14 | 72 | 403 | 76 | 381 | 3.68e-13 | 71.6 |
MS.gene50420.t1 | AT1G24420 | 25.581 | 344 | 206 | 14 | 72 | 403 | 76 | 381 | 3.68e-13 | 71.6 |
MS.gene50420.t1 | AT2G40230 | 24.259 | 371 | 229 | 14 | 53 | 403 | 51 | 389 | 1.15e-11 | 67.0 |
MS.gene50420.t1 | AT3G47170 | 21.711 | 304 | 194 | 8 | 61 | 340 | 70 | 353 | 1.31e-11 | 67.0 |
MS.gene50420.t1 | AT1G31490 | 24.377 | 361 | 221 | 13 | 58 | 401 | 59 | 384 | 3.60e-11 | 65.5 |
MS.gene50420.t1 | AT1G27620 | 23.514 | 387 | 269 | 15 | 61 | 442 | 58 | 422 | 4.63e-11 | 65.1 |
MS.gene50420.t1 | AT5G47980 | 23.544 | 412 | 245 | 18 | 60 | 444 | 60 | 428 | 7.37e-11 | 64.3 |
Find 94 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGTTAGAAGAGAATTATTT+TGG | 0.198109 | 4.4:+79463632 | MS.gene50420:CDS |
TTGTCTTCCTTATGATATTT+TGG | 0.223517 | 4.4:+79464003 | MS.gene50420:CDS |
CATTCTTGTCCTACAATCTA+TGG | 0.234125 | 4.4:-79463603 | None:intergenic |
GGATCTCAAATTTCTCAAAT+TGG | 0.239669 | 4.4:+79462812 | MS.gene50420:CDS |
GGATATGTAATAATGCAAAA+AGG | 0.251454 | 4.4:+79463674 | MS.gene50420:CDS |
ATGGGAAGGTTAACATTGTT+TGG | 0.295352 | 4.4:-79463311 | None:intergenic |
TATGGAAAAGAAGACCTCTT+TGG | 0.321294 | 4.4:-79462842 | None:intergenic |
CATCACCATGATTTGTTGCT+TGG | 0.340899 | 4.4:-79462746 | None:intergenic |
TTTGTTTAAGATGGTCAATT+TGG | 0.343039 | 4.4:-79462878 | None:intergenic |
AAATAATTCTCTTCTAACTT+TGG | 0.349532 | 4.4:-79463629 | None:intergenic |
GTGTAGACGGCAAGTCATTT+TGG | 0.349934 | 4.4:+79463210 | MS.gene50420:CDS |
ATGGAAAAGAAGACCTCTTT+GGG | 0.360598 | 4.4:-79462841 | None:intergenic |
ACGAATGCAGACCTTTCTTC+TGG | 0.360777 | 4.4:-79463575 | None:intergenic |
GTTGAAAACCCCGTTTATAT+CGG | 0.362533 | 4.4:+79463799 | MS.gene50420:CDS |
TTTGGCATTTCATCAACTCT+TGG | 0.368556 | 4.4:+79463228 | MS.gene50420:CDS |
TTACGGTAATGACTTTGGTT+GGG | 0.373170 | 4.4:+79463880 | MS.gene50420:CDS |
TTGGCATTTCATCAACTCTT+GGG | 0.376104 | 4.4:+79463229 | MS.gene50420:CDS |
AGCCTATTGCAGTTAGAAAT+GGG | 0.388093 | 4.4:+79463906 | MS.gene50420:CDS |
GTTGGACTGCAAAGAAATAT+TGG | 0.392396 | 4.4:+79463929 | MS.gene50420:CDS |
ACCCCATTTCTAACTGCAAT+AGG | 0.394232 | 4.4:-79463908 | None:intergenic |
TCGTCTTACCCATAGATTGT+AGG | 0.400779 | 4.4:+79463594 | MS.gene50420:CDS |
AAGCCTATTGCAGTTAGAAA+TGG | 0.401535 | 4.4:+79463905 | MS.gene50420:CDS |
AACTATTACGGTAATGACTT+TGG | 0.405935 | 4.4:+79463875 | MS.gene50420:CDS |
TTAATCGACGGTATCTTCAT+TGG | 0.408333 | 4.4:+79463167 | MS.gene50420:CDS |
CTACCTGGCTCCGATATAAA+CGG | 0.425817 | 4.4:-79463809 | None:intergenic |
TACCTGGCTCCGATATAAAC+GGG | 0.427106 | 4.4:-79463808 | None:intergenic |
GGGAGTGGAATCGGAGCAAC+TGG | 0.428061 | 4.4:+79463653 | MS.gene50420:CDS |
TCGCCACGGTTCAACTATTA+CGG | 0.439762 | 4.4:+79463863 | MS.gene50420:CDS |
AAATTGTTCATTTATCTCCA+TGG | 0.445544 | 4.4:+79462790 | MS.gene50420:CDS |
ATTACGGTAATGACTTTGGT+TGG | 0.447960 | 4.4:+79463879 | MS.gene50420:CDS |
AGGCAAGTGTTTGTTTAAGA+TGG | 0.458293 | 4.4:-79462887 | None:intergenic |
TACGGTAATGACTTTGGTTG+GGG | 0.461686 | 4.4:+79463881 | MS.gene50420:CDS |
GTGAATGGTGGGGCAGAAGA+AGG | 0.474870 | 4.4:+79463962 | MS.gene50420:CDS |
ATAGCCTCCAAAATATCATA+AGG | 0.481866 | 4.4:-79464010 | None:intergenic |
AATTGTTCATTTATCTCCAT+GGG | 0.481963 | 4.4:+79462791 | MS.gene50420:CDS |
AAAGGGGAATTAATGGAAAG+TGG | 0.488381 | 4.4:+79463692 | MS.gene50420:CDS |
GGAAACCAACGTTCGAAAGA+AGG | 0.490929 | 4.4:-79463290 | None:intergenic |
ACAATCCAAGCAACAAATCA+TGG | 0.492574 | 4.4:+79462741 | MS.gene50420:CDS |
TAAGAATAATGAAGAAACAA+TGG | 0.493631 | 4.4:-79463081 | None:intergenic |
ACAATGGGAGGAACATACTT+TGG | 0.495798 | 4.4:-79463065 | None:intergenic |
AAGAATAATGAAGAAACAAT+GGG | 0.496513 | 4.4:-79463080 | None:intergenic |
TTGAGAAATTTGAGATCCCA+TGG | 0.499411 | 4.4:-79462807 | None:intergenic |
GGTAGAGTTATTGTGAATGG+TGG | 0.501616 | 4.4:+79463950 | MS.gene50420:CDS |
ACCAGCGTTGTTACAAATGA+TGG | 0.505482 | 4.4:-79462988 | None:intergenic |
GAATTTGTTCCTTTGTAAAG+TGG | 0.513443 | 4.4:-79463397 | None:intergenic |
ATTGGTAGAGTTATTGTGAA+TGG | 0.514289 | 4.4:+79463947 | MS.gene50420:CDS |
AACTTCTTTCCACCACTCGC+TGG | 0.516081 | 4.4:+79462918 | MS.gene50420:CDS |
AACTAGAATCCATGGACATA+GGG | 0.518441 | 4.4:-79464042 | None:intergenic |
TAATGAGTGATATTGAATCT+TGG | 0.523510 | 4.4:+79463777 | MS.gene50420:CDS |
TGGGATTCGTAAAATTGCTA+TGG | 0.525481 | 4.4:+79463712 | MS.gene50420:CDS |
TACTTATAATTAAACGCCAA+AGG | 0.529613 | 4.4:-79463538 | None:intergenic |
AAGGGGAATTAATGGAAAGT+GGG | 0.533012 | 4.4:+79463693 | MS.gene50420:CDS |
ATGGAACATGAGGCGTTGCT+AGG | 0.533394 | 4.4:-79462969 | None:intergenic |
AAACTAGAATCCATGGACAT+AGG | 0.534361 | 4.4:-79464043 | None:intergenic |
AAAATCTTAAACCAGAAGAA+AGG | 0.538946 | 4.4:+79463564 | MS.gene50420:CDS |
CATACGGTTTCCTTTCACAA+AGG | 0.546568 | 4.4:+79463331 | MS.gene50420:CDS |
ACCCCGTTTATATCGGAGCC+AGG | 0.547815 | 4.4:+79463806 | MS.gene50420:CDS |
GTTGATGAAACTAGAATCCA+TGG | 0.549745 | 4.4:-79464050 | None:intergenic |
AGATTACTTGATGATCTACC+TGG | 0.550288 | 4.4:-79463824 | None:intergenic |
ACAATGTTAACCTTCCCATA+CGG | 0.562792 | 4.4:+79463315 | MS.gene50420:CDS |
CTTTGTGAAAGGAAACCGTA+TGG | 0.565930 | 4.4:-79463330 | None:intergenic |
TGGTTGAAGTATGTCGGCAA+TGG | 0.566982 | 4.4:-79463045 | None:intergenic |
ATTGCAGTTAGAAATGGGGT+TGG | 0.568648 | 4.4:+79463911 | MS.gene50420:CDS |
ATACTTTGGTTGAAGTATGT+CGG | 0.572459 | 4.4:-79463051 | None:intergenic |
AAAAGAAGACCTCTTTGGGT+TGG | 0.572933 | 4.4:-79462837 | None:intergenic |
AGAAGACGACCCTATGTCCA+TGG | 0.573614 | 4.4:+79464033 | MS.gene50420:CDS |
CAAGCAACAAATCATGGTGA+TGG | 0.574475 | 4.4:+79462747 | MS.gene50420:CDS |
ATTCTTGTCCTACAATCTAT+GGG | 0.578627 | 4.4:-79463602 | None:intergenic |
TGAAAGGAAACCGTATGGGA+AGG | 0.580544 | 4.4:-79463325 | None:intergenic |
GTAGAGTTATTGTGAATGGT+GGG | 0.583851 | 4.4:+79463951 | MS.gene50420:CDS |
TGGTGGAAAGAAGTTAAGTG+TGG | 0.592664 | 4.4:-79462910 | None:intergenic |
GTTACTTGTACTGCAAGTAG+TGG | 0.602193 | 4.4:-79463140 | None:intergenic |
TCGAATCTTCCACTTTACAA+AGG | 0.603894 | 4.4:+79463388 | MS.gene50420:CDS |
AAGTACCTTCTTTCGAACGT+TGG | 0.604822 | 4.4:+79463285 | MS.gene50420:CDS |
ATTAACCATGTGTGTGTAGA+CGG | 0.608212 | 4.4:+79463197 | MS.gene50420:CDS |
GCCTATTGCAGTTAGAAATG+GGG | 0.609427 | 4.4:+79463907 | MS.gene50420:CDS |
TCCATCATTTGTAACAACGC+TGG | 0.618527 | 4.4:+79462987 | MS.gene50420:CDS |
ACAAATCATGGTGATGGTGA+TGG | 0.619825 | 4.4:+79462753 | MS.gene50420:CDS |
TGATAGCAAGCAGTTCGCCA+CGG | 0.626185 | 4.4:+79463849 | MS.gene50420:CDS |
ACAAGACGACCAGCGAGTGG+TGG | 0.630223 | 4.4:-79462927 | None:intergenic |
GTTACAAATGATGGAACATG+AGG | 0.636643 | 4.4:-79462979 | None:intergenic |
AATTGCTATGGAAATGAACA+AGG | 0.638167 | 4.4:+79463724 | MS.gene50420:CDS |
AAATTGGCACCAACCCAAAG+AGG | 0.639346 | 4.4:+79462828 | MS.gene50420:CDS |
TTTGTGAAAGGAAACCGTAT+GGG | 0.642383 | 4.4:-79463329 | None:intergenic |
TCTTGGGCTGAAATCTCACA+AGG | 0.661149 | 4.4:+79463245 | MS.gene50420:CDS |
TGGAAAGAAGTTAAGTGTGG+AGG | 0.665000 | 4.4:-79462907 | None:intergenic |
CAAGTAACAGAGTTAATCGA+CGG | 0.676652 | 4.4:+79463155 | MS.gene50420:CDS |
AATAATGAAGAAACAATGGG+AGG | 0.681867 | 4.4:-79463077 | None:intergenic |
ACTTGCCGTCTACACACACA+TGG | 0.683354 | 4.4:-79463202 | None:intergenic |
ATTACAAGACGACCAGCGAG+TGG | 0.695572 | 4.4:-79462930 | None:intergenic |
AATGATGTGAAAAGCTACGA+AGG | 0.699069 | 4.4:+79463107 | MS.gene50420:CDS |
TAGAGTTATTGTGAATGGTG+GGG | 0.705324 | 4.4:+79463952 | MS.gene50420:CDS |
ACCTGGCTCCGATATAAACG+GGG | 0.710991 | 4.4:-79463807 | None:intergenic |
TTACCGTAATAGTTGAACCG+TGG | 0.733929 | 4.4:-79463866 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTCTCTTCTAACTT+TGG | - | chr4.4:79463632-79463651 | None:intergenic | 20.0% |
!! | AAGAATAATGAAGAAACAAT+GGG | - | chr4.4:79463083-79463102 | None:intergenic | 20.0% |
!! | ATATGTAATAATGCAAAAAG+GGG | + | chr4.4:79463676-79463695 | MS.gene50420:CDS | 20.0% |
!! | GATATGTAATAATGCAAAAA+GGG | + | chr4.4:79463675-79463694 | MS.gene50420:CDS | 20.0% |
!! | TAAGAATAATGAAGAAACAA+TGG | - | chr4.4:79463084-79463103 | None:intergenic | 20.0% |
!!! | AAGTTAGAAGAGAATTATTT+TGG | + | chr4.4:79463632-79463651 | MS.gene50420:CDS | 20.0% |
!!! | AGTTAGAAGAGAATTATTTT+GGG | + | chr4.4:79463633-79463652 | MS.gene50420:CDS | 20.0% |
! | AAAATCTTAAACCAGAAGAA+AGG | + | chr4.4:79463564-79463583 | MS.gene50420:CDS | 25.0% |
! | AAATTGTTCATTTATCTCCA+TGG | + | chr4.4:79462790-79462809 | MS.gene50420:CDS | 25.0% |
! | AATTGTTCATTTATCTCCAT+GGG | + | chr4.4:79462791-79462810 | MS.gene50420:CDS | 25.0% |
! | GGATATGTAATAATGCAAAA+AGG | + | chr4.4:79463674-79463693 | MS.gene50420:CDS | 25.0% |
! | TAATGAGTGATATTGAATCT+TGG | + | chr4.4:79463777-79463796 | MS.gene50420:CDS | 25.0% |
! | TACTTATAATTAAACGCCAA+AGG | - | chr4.4:79463541-79463560 | None:intergenic | 25.0% |
!! | TTGTCTTCCTTATGATATTT+TGG | + | chr4.4:79464003-79464022 | MS.gene50420:CDS | 25.0% |
!! | TTTGTTTAAGATGGTCAATT+TGG | - | chr4.4:79462881-79462900 | None:intergenic | 25.0% |
!!! | TTTGGTTTGTTTTAGGTTTA+TGG | - | chr4.4:79462863-79462882 | None:intergenic | 25.0% |
AACTATTACGGTAATGACTT+TGG | + | chr4.4:79463875-79463894 | MS.gene50420:CDS | 30.0% | |
AATAATGAAGAAACAATGGG+AGG | - | chr4.4:79463080-79463099 | None:intergenic | 30.0% | |
AATGCAAAAAGGGGAATTAA+TGG | + | chr4.4:79463685-79463704 | MS.gene50420:CDS | 30.0% | |
AATTGCTATGGAAATGAACA+AGG | + | chr4.4:79463724-79463743 | MS.gene50420:CDS | 30.0% | |
ATACTTTGGTTGAAGTATGT+CGG | - | chr4.4:79463054-79463073 | None:intergenic | 30.0% | |
ATAGCCTCCAAAATATCATA+AGG | - | chr4.4:79464013-79464032 | None:intergenic | 30.0% | |
ATTCTTGTCCTACAATCTAT+GGG | - | chr4.4:79463605-79463624 | None:intergenic | 30.0% | |
ATTGGTAGAGTTATTGTGAA+TGG | + | chr4.4:79463947-79463966 | MS.gene50420:CDS | 30.0% | |
GGATCTCAAATTTCTCAAAT+TGG | + | chr4.4:79462812-79462831 | MS.gene50420:CDS | 30.0% | |
! | GAATTTGTTCCTTTGTAAAG+TGG | - | chr4.4:79463400-79463419 | None:intergenic | 30.0% |
!! | TCTTCCTTATGATATTTTGG+AGG | + | chr4.4:79464006-79464025 | MS.gene50420:CDS | 30.0% |
!!! | AATTATTTTGGGAGTGGAAT+CGG | + | chr4.4:79463644-79463663 | MS.gene50420:CDS | 30.0% |
!!! | TGGTCAATTTGGTTTGTTTT+AGG | - | chr4.4:79462870-79462889 | None:intergenic | 30.0% |
AAACTAGAATCCATGGACAT+AGG | - | chr4.4:79464046-79464065 | None:intergenic | 35.0% | |
AAAGGGGAATTAATGGAAAG+TGG | + | chr4.4:79463692-79463711 | MS.gene50420:CDS | 35.0% | |
AACTAGAATCCATGGACATA+GGG | - | chr4.4:79464045-79464064 | None:intergenic | 35.0% | |
AAGCCTATTGCAGTTAGAAA+TGG | + | chr4.4:79463905-79463924 | MS.gene50420:CDS | 35.0% | |
AAGGGGAATTAATGGAAAGT+GGG | + | chr4.4:79463693-79463712 | MS.gene50420:CDS | 35.0% | |
AATGATGTGAAAAGCTACGA+AGG | + | chr4.4:79463107-79463126 | MS.gene50420:CDS | 35.0% | |
ACAATCCAAGCAACAAATCA+TGG | + | chr4.4:79462741-79462760 | MS.gene50420:CDS | 35.0% | |
ACAATGTTAACCTTCCCATA+CGG | + | chr4.4:79463315-79463334 | MS.gene50420:CDS | 35.0% | |
AGCCTATTGCAGTTAGAAAT+GGG | + | chr4.4:79463906-79463925 | MS.gene50420:CDS | 35.0% | |
AGGCAAGTGTTTGTTTAAGA+TGG | - | chr4.4:79462890-79462909 | None:intergenic | 35.0% | |
ATGGAAAAGAAGACCTCTTT+GGG | - | chr4.4:79462844-79462863 | None:intergenic | 35.0% | |
ATGGGAAGGTTAACATTGTT+TGG | - | chr4.4:79463314-79463333 | None:intergenic | 35.0% | |
ATTAACCATGTGTGTGTAGA+CGG | + | chr4.4:79463197-79463216 | MS.gene50420:CDS | 35.0% | |
ATTACGGTAATGACTTTGGT+TGG | + | chr4.4:79463879-79463898 | MS.gene50420:CDS | 35.0% | |
CAAGTAACAGAGTTAATCGA+CGG | + | chr4.4:79463155-79463174 | MS.gene50420:CDS | 35.0% | |
CATTCTTGTCCTACAATCTA+TGG | - | chr4.4:79463606-79463625 | None:intergenic | 35.0% | |
GTAGAGTTATTGTGAATGGT+GGG | + | chr4.4:79463951-79463970 | MS.gene50420:CDS | 35.0% | |
GTTGAAAACCCCGTTTATAT+CGG | + | chr4.4:79463799-79463818 | MS.gene50420:CDS | 35.0% | |
GTTGGACTGCAAAGAAATAT+TGG | + | chr4.4:79463929-79463948 | MS.gene50420:CDS | 35.0% | |
TAGAGTTATTGTGAATGGTG+GGG | + | chr4.4:79463952-79463971 | MS.gene50420:CDS | 35.0% | |
TATGGAAAAGAAGACCTCTT+TGG | - | chr4.4:79462845-79462864 | None:intergenic | 35.0% | |
TCGAATCTTCCACTTTACAA+AGG | + | chr4.4:79463388-79463407 | MS.gene50420:CDS | 35.0% | |
TGGGATTCGTAAAATTGCTA+TGG | + | chr4.4:79463712-79463731 | MS.gene50420:CDS | 35.0% | |
TTAATCGACGGTATCTTCAT+TGG | + | chr4.4:79463167-79463186 | MS.gene50420:CDS | 35.0% | |
TTACGGTAATGACTTTGGTT+GGG | + | chr4.4:79463880-79463899 | MS.gene50420:CDS | 35.0% | |
TTGGCATTTCATCAACTCTT+GGG | + | chr4.4:79463229-79463248 | MS.gene50420:CDS | 35.0% | |
TTTGGCATTTCATCAACTCT+TGG | + | chr4.4:79463228-79463247 | MS.gene50420:CDS | 35.0% | |
TTTGTGAAAGGAAACCGTAT+GGG | - | chr4.4:79463332-79463351 | None:intergenic | 35.0% | |
! | AGATTACTTGATGATCTACC+TGG | - | chr4.4:79463827-79463846 | None:intergenic | 35.0% |
! | GTTACAAATGATGGAACATG+AGG | - | chr4.4:79462982-79463001 | None:intergenic | 35.0% |
! | GTTGATGAAACTAGAATCCA+TGG | - | chr4.4:79464053-79464072 | None:intergenic | 35.0% |
! | TTGAGAAATTTGAGATCCCA+TGG | - | chr4.4:79462810-79462829 | None:intergenic | 35.0% |
! | TTTTGTGCATCCTTTGTGAA+AGG | - | chr4.4:79463344-79463363 | None:intergenic | 35.0% |
!!! | AGGTACTTTTGTTGGCTTAT+TGG | - | chr4.4:79463273-79463292 | None:intergenic | 35.0% |
!!! | GAAGAGAATTATTTTGGGAG+TGG | + | chr4.4:79463638-79463657 | MS.gene50420:CDS | 35.0% |
!!! | TCGAAAGAAGGTACTTTTGT+TGG | - | chr4.4:79463281-79463300 | None:intergenic | 35.0% |
AAAAGAAGACCTCTTTGGGT+TGG | - | chr4.4:79462840-79462859 | None:intergenic | 40.0% | |
AAGTACCTTCTTTCGAACGT+TGG | + | chr4.4:79463285-79463304 | MS.gene50420:CDS | 40.0% | |
ACAATGGGAGGAACATACTT+TGG | - | chr4.4:79463068-79463087 | None:intergenic | 40.0% | |
ACCAGCGTTGTTACAAATGA+TGG | - | chr4.4:79462991-79463010 | None:intergenic | 40.0% | |
ACCCCATTTCTAACTGCAAT+AGG | - | chr4.4:79463911-79463930 | None:intergenic | 40.0% | |
ATTGCAGTTAGAAATGGGGT+TGG | + | chr4.4:79463911-79463930 | MS.gene50420:CDS | 40.0% | |
CAAGCAACAAATCATGGTGA+TGG | + | chr4.4:79462747-79462766 | MS.gene50420:CDS | 40.0% | |
CATACGGTTTCCTTTCACAA+AGG | + | chr4.4:79463331-79463350 | MS.gene50420:CDS | 40.0% | |
CTTTGTGAAAGGAAACCGTA+TGG | - | chr4.4:79463333-79463352 | None:intergenic | 40.0% | |
GCCTATTGCAGTTAGAAATG+GGG | + | chr4.4:79463907-79463926 | MS.gene50420:CDS | 40.0% | |
GGTAGAGTTATTGTGAATGG+TGG | + | chr4.4:79463950-79463969 | MS.gene50420:CDS | 40.0% | |
GTTACTTGTACTGCAAGTAG+TGG | - | chr4.4:79463143-79463162 | None:intergenic | 40.0% | |
TACGGTAATGACTTTGGTTG+GGG | + | chr4.4:79463881-79463900 | MS.gene50420:CDS | 40.0% | |
TCCATCATTTGTAACAACGC+TGG | + | chr4.4:79462987-79463006 | MS.gene50420:CDS | 40.0% | |
TCGTCTTACCCATAGATTGT+AGG | + | chr4.4:79463594-79463613 | MS.gene50420:CDS | 40.0% | |
TGGAAAGAAGTTAAGTGTGG+AGG | - | chr4.4:79462910-79462929 | None:intergenic | 40.0% | |
TGGTGGAAAGAAGTTAAGTG+TGG | - | chr4.4:79462913-79462932 | None:intergenic | 40.0% | |
TTACCGTAATAGTTGAACCG+TGG | - | chr4.4:79463869-79463888 | None:intergenic | 40.0% | |
!! | AAGCGCTTTTAAGTCACCTT+TGG | + | chr4.4:79463522-79463541 | MS.gene50420:CDS | 40.0% |
!! | AATGGTAGTGTTTTCTGCTG+TGG | - | chr4.4:79463030-79463049 | None:intergenic | 40.0% |
!! | ACAAATCATGGTGATGGTGA+TGG | + | chr4.4:79462753-79462772 | MS.gene50420:CDS | 40.0% |
!! | CATCACCATGATTTGTTGCT+TGG | - | chr4.4:79462749-79462768 | None:intergenic | 40.0% |
AAATTGGCACCAACCCAAAG+AGG | + | chr4.4:79462828-79462847 | MS.gene50420:CDS | 45.0% | |
ACGAATGCAGACCTTTCTTC+TGG | - | chr4.4:79463578-79463597 | None:intergenic | 45.0% | |
CTACCTGGCTCCGATATAAA+CGG | - | chr4.4:79463812-79463831 | None:intergenic | 45.0% | |
GGAAACCAACGTTCGAAAGA+AGG | - | chr4.4:79463293-79463312 | None:intergenic | 45.0% | |
TACCTGGCTCCGATATAAAC+GGG | - | chr4.4:79463811-79463830 | None:intergenic | 45.0% | |
TCGCCACGGTTCAACTATTA+CGG | + | chr4.4:79463863-79463882 | MS.gene50420:CDS | 45.0% | |
TCTTGGGCTGAAATCTCACA+AGG | + | chr4.4:79463245-79463264 | MS.gene50420:CDS | 45.0% | |
TGAAAGGAAACCGTATGGGA+AGG | - | chr4.4:79463328-79463347 | None:intergenic | 45.0% | |
TGGTTGAAGTATGTCGGCAA+TGG | - | chr4.4:79463048-79463067 | None:intergenic | 45.0% | |
! | GTGTAGACGGCAAGTCATTT+TGG | + | chr4.4:79463210-79463229 | MS.gene50420:CDS | 45.0% |
AACTTCTTTCCACCACTCGC+TGG | + | chr4.4:79462918-79462937 | MS.gene50420:CDS | 50.0% | |
ACCTGGCTCCGATATAAACG+GGG | - | chr4.4:79463810-79463829 | None:intergenic | 50.0% | |
ACTTGCCGTCTACACACACA+TGG | - | chr4.4:79463205-79463224 | None:intergenic | 50.0% | |
AGAAGACGACCCTATGTCCA+TGG | + | chr4.4:79464033-79464052 | MS.gene50420:CDS | 50.0% | |
ATTACAAGACGACCAGCGAG+TGG | - | chr4.4:79462933-79462952 | None:intergenic | 50.0% | |
TGATAGCAAGCAGTTCGCCA+CGG | + | chr4.4:79463849-79463868 | MS.gene50420:CDS | 50.0% | |
! | TAGTGTTTTCTGCTGTGGCG+TGG | - | chr4.4:79463025-79463044 | None:intergenic | 50.0% |
!! | ATGGAACATGAGGCGTTGCT+AGG | - | chr4.4:79462972-79462991 | None:intergenic | 50.0% |
ACCCCGTTTATATCGGAGCC+AGG | + | chr4.4:79463806-79463825 | MS.gene50420:CDS | 55.0% | |
! | GTGAATGGTGGGGCAGAAGA+AGG | + | chr4.4:79463962-79463981 | MS.gene50420:CDS | 55.0% |
ACAAGACGACCAGCGAGTGG+TGG | - | chr4.4:79462930-79462949 | None:intergenic | 60.0% | |
GGGAGTGGAATCGGAGCAAC+TGG | + | chr4.4:79463653-79463672 | MS.gene50420:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 79462711 | 79464096 | 79462711 | ID=MS.gene50420 |
chr4.4 | mRNA | 79462711 | 79464096 | 79462711 | ID=MS.gene50420.t1;Parent=MS.gene50420 |
chr4.4 | exon | 79462711 | 79464096 | 79462711 | ID=MS.gene50420.t1.exon1;Parent=MS.gene50420.t1 |
chr4.4 | CDS | 79462711 | 79464096 | 79462711 | ID=cds.MS.gene50420.t1;Parent=MS.gene50420.t1 |
Gene Sequence |
Protein sequence |