Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011799.t1 | XP_004509128.1 | 71.1 | 443 | 117 | 4 | 1 | 443 | 1 | 432 | 1.70E-176 | 629 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011799.t1 | Q9SND9 | 36.7 | 450 | 273 | 6 | 1 | 446 | 1 | 442 | 2.1e-82 | 307.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011799.t1 | A0A1S2YSC3 | 71.1 | 443 | 117 | 4 | 1 | 443 | 1 | 432 | 1.2e-176 | 629.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011799.t1 | MTR_4g094835 | 67.991 | 453 | 134 | 5 | 1 | 448 | 1 | 447 | 0.0 | 625 |
MS.gene011799.t1 | MTR_4g094838 | 65.342 | 453 | 127 | 5 | 4 | 447 | 1 | 432 | 0.0 | 584 |
MS.gene011799.t1 | MTR_4g094832 | 67.277 | 382 | 105 | 4 | 78 | 447 | 57 | 430 | 0.0 | 520 |
MS.gene011799.t1 | MTR_4g094842 | 57.837 | 453 | 172 | 8 | 1 | 443 | 1 | 444 | 0.0 | 520 |
MS.gene011799.t1 | MTR_0190s0020 | 58.186 | 452 | 174 | 8 | 1 | 447 | 1 | 442 | 3.27e-180 | 511 |
MS.gene011799.t1 | MTR_8g041770 | 55.752 | 452 | 184 | 9 | 1 | 447 | 1 | 441 | 6.81e-172 | 490 |
MS.gene011799.t1 | MTR_4g094828 | 54.230 | 461 | 188 | 11 | 1 | 448 | 1 | 451 | 7.90e-171 | 488 |
MS.gene011799.t1 | MTR_3g088420 | 56.347 | 449 | 178 | 10 | 1 | 447 | 1 | 433 | 9.50e-169 | 481 |
MS.gene011799.t1 | MTR_4g022825 | 54.767 | 451 | 183 | 11 | 1 | 444 | 1 | 437 | 1.23e-165 | 474 |
MS.gene011799.t1 | MTR_4g022800 | 54.923 | 457 | 181 | 11 | 1 | 447 | 1 | 442 | 4.38e-164 | 470 |
MS.gene011799.t1 | MTR_8g079710 | 56.250 | 448 | 174 | 11 | 1 | 438 | 1 | 436 | 7.01e-164 | 469 |
MS.gene011799.t1 | MTR_4g022720 | 54.204 | 452 | 185 | 10 | 1 | 447 | 1 | 435 | 2.22e-162 | 465 |
MS.gene011799.t1 | MTR_4g022290 | 54.167 | 456 | 183 | 11 | 1 | 444 | 1 | 442 | 4.67e-162 | 465 |
MS.gene011799.t1 | MTR_4g022670 | 52.980 | 453 | 189 | 10 | 1 | 444 | 1 | 438 | 1.35e-160 | 461 |
MS.gene011799.t1 | MTR_3g026310 | 52.723 | 459 | 188 | 12 | 1 | 444 | 1 | 445 | 4.59e-157 | 452 |
MS.gene011799.t1 | MTR_7g026860 | 53.187 | 455 | 188 | 11 | 1 | 447 | 1 | 438 | 1.45e-156 | 451 |
MS.gene011799.t1 | MTR_4g022760 | 47.692 | 455 | 172 | 9 | 1 | 447 | 1 | 397 | 5.34e-135 | 394 |
MS.gene011799.t1 | MTR_6g016815 | 41.741 | 448 | 179 | 12 | 1 | 447 | 15 | 381 | 1.82e-100 | 305 |
MS.gene011799.t1 | MTR_3g101900 | 39.767 | 430 | 243 | 7 | 27 | 447 | 26 | 448 | 1.59e-96 | 298 |
MS.gene011799.t1 | MTR_3g101930 | 39.140 | 442 | 243 | 8 | 21 | 444 | 19 | 452 | 1.09e-94 | 293 |
MS.gene011799.t1 | MTR_3g102020 | 38.961 | 462 | 252 | 11 | 3 | 448 | 5 | 452 | 3.84e-94 | 292 |
MS.gene011799.t1 | MTR_3g102010 | 38.261 | 460 | 255 | 11 | 4 | 448 | 7 | 452 | 1.53e-90 | 283 |
MS.gene011799.t1 | MTR_3g101960 | 37.744 | 461 | 260 | 9 | 3 | 449 | 5 | 452 | 3.74e-90 | 281 |
MS.gene011799.t1 | MTR_3g101970 | 38.084 | 428 | 237 | 8 | 27 | 444 | 25 | 434 | 5.94e-88 | 275 |
MS.gene011799.t1 | MTR_5g081960 | 34.034 | 476 | 245 | 10 | 24 | 443 | 20 | 482 | 3.88e-81 | 259 |
MS.gene011799.t1 | MTR_3g070170 | 35.076 | 459 | 241 | 10 | 24 | 443 | 26 | 466 | 6.58e-80 | 255 |
MS.gene011799.t1 | MTR_4g094825 | 74.566 | 173 | 39 | 3 | 19 | 188 | 80 | 250 | 7.90e-80 | 253 |
MS.gene011799.t1 | MTR_4g094825 | 76.000 | 150 | 26 | 1 | 298 | 447 | 252 | 391 | 3.49e-70 | 228 |
MS.gene011799.t1 | MTR_8g040780 | 55.714 | 210 | 88 | 3 | 236 | 442 | 20 | 227 | 8.43e-74 | 232 |
MS.gene011799.t1 | MTR_4g015180 | 32.186 | 494 | 263 | 9 | 8 | 443 | 4 | 483 | 7.60e-72 | 235 |
MS.gene011799.t1 | MTR_8g040760 | 53.881 | 219 | 94 | 4 | 1 | 217 | 1 | 214 | 4.33e-68 | 216 |
MS.gene011799.t1 | MTR_3g102030 | 32.641 | 337 | 184 | 7 | 75 | 401 | 17 | 320 | 2.50e-49 | 171 |
MS.gene011799.t1 | MTR_7g026850 | 50.588 | 170 | 79 | 4 | 36 | 203 | 12 | 178 | 8.99e-48 | 162 |
MS.gene011799.t1 | MTR_7g026770 | 49.171 | 181 | 69 | 3 | 151 | 331 | 132 | 289 | 1.35e-47 | 166 |
MS.gene011799.t1 | MTR_6g045553 | 28.416 | 461 | 266 | 13 | 27 | 443 | 31 | 471 | 9.98e-47 | 168 |
MS.gene011799.t1 | MTR_6g034495 | 54.225 | 142 | 56 | 3 | 56 | 188 | 19 | 160 | 2.53e-42 | 147 |
MS.gene011799.t1 | MTR_6g034485 | 53.846 | 130 | 55 | 2 | 196 | 325 | 1 | 125 | 8.87e-42 | 144 |
MS.gene011799.t1 | MTR_8g075610 | 27.249 | 389 | 245 | 16 | 64 | 436 | 47 | 413 | 6.83e-30 | 120 |
MS.gene011799.t1 | MTR_8g096530 | 30.814 | 344 | 207 | 13 | 64 | 396 | 59 | 382 | 1.29e-29 | 120 |
MS.gene011799.t1 | MTR_4g007540 | 29.592 | 392 | 240 | 19 | 64 | 438 | 56 | 428 | 3.53e-29 | 119 |
MS.gene011799.t1 | MTR_3g098980 | 28.647 | 377 | 233 | 16 | 64 | 428 | 66 | 418 | 1.14e-27 | 114 |
MS.gene011799.t1 | MTR_7g026830 | 59.756 | 82 | 33 | 0 | 94 | 175 | 16 | 97 | 2.87e-27 | 105 |
MS.gene011799.t1 | MTR_2g105330 | 27.778 | 378 | 244 | 16 | 64 | 428 | 56 | 417 | 2.04e-26 | 111 |
MS.gene011799.t1 | MTR_3g026950 | 25.369 | 406 | 250 | 13 | 61 | 432 | 51 | 437 | 4.40e-26 | 110 |
MS.gene011799.t1 | MTR_2g064495 | 27.604 | 384 | 237 | 18 | 64 | 428 | 56 | 417 | 5.44e-26 | 110 |
MS.gene011799.t1 | MTR_3g049150 | 24.810 | 395 | 261 | 12 | 61 | 432 | 52 | 433 | 2.43e-25 | 108 |
MS.gene011799.t1 | MTR_7g027175 | 27.604 | 384 | 253 | 10 | 59 | 434 | 63 | 429 | 6.39e-25 | 107 |
MS.gene011799.t1 | MTR_4g127650 | 24.601 | 439 | 287 | 15 | 26 | 436 | 26 | 448 | 2.12e-24 | 105 |
MS.gene011799.t1 | MTR_4g097090 | 24.485 | 437 | 271 | 18 | 28 | 428 | 27 | 440 | 2.89e-24 | 105 |
MS.gene011799.t1 | MTR_3g071320 | 27.103 | 321 | 206 | 10 | 29 | 333 | 24 | 332 | 7.86e-21 | 94.7 |
MS.gene011799.t1 | MTR_7g026780 | 43.750 | 112 | 37 | 2 | 336 | 447 | 26 | 111 | 2.13e-20 | 86.7 |
MS.gene011799.t1 | MTR_1g040175 | 23.644 | 461 | 299 | 20 | 11 | 450 | 18 | 446 | 2.00e-19 | 90.9 |
MS.gene011799.t1 | MTR_3g086020 | 26.598 | 391 | 240 | 18 | 62 | 443 | 59 | 411 | 2.05e-19 | 90.5 |
MS.gene011799.t1 | MTR_1g081660 | 23.662 | 355 | 241 | 11 | 64 | 409 | 73 | 406 | 5.12e-19 | 89.4 |
MS.gene011799.t1 | MTR_3g087640 | 27.451 | 459 | 255 | 24 | 29 | 434 | 29 | 462 | 8.80e-18 | 85.9 |
MS.gene011799.t1 | MTR_1g040195 | 25.389 | 386 | 228 | 18 | 76 | 434 | 53 | 405 | 1.13e-17 | 85.5 |
MS.gene011799.t1 | MTR_7g084940 | 25.797 | 345 | 223 | 11 | 64 | 396 | 69 | 392 | 1.44e-17 | 85.1 |
MS.gene011799.t1 | MTR_4g013050 | 25.070 | 359 | 208 | 15 | 58 | 397 | 47 | 363 | 1.64e-17 | 84.7 |
MS.gene011799.t1 | MTR_8g012750 | 24.146 | 410 | 258 | 15 | 29 | 396 | 24 | 422 | 1.87e-17 | 85.1 |
MS.gene011799.t1 | MTR_7g056087 | 25.515 | 388 | 248 | 18 | 62 | 429 | 56 | 422 | 2.86e-17 | 84.0 |
MS.gene011799.t1 | MTR_6g015315 | 26.462 | 359 | 229 | 15 | 63 | 399 | 62 | 407 | 3.21e-17 | 84.0 |
MS.gene011799.t1 | MTR_3g112180 | 25.806 | 279 | 189 | 8 | 60 | 329 | 57 | 326 | 3.48e-17 | 84.0 |
MS.gene011799.t1 | MTR_6g015850 | 23.226 | 465 | 304 | 13 | 3 | 436 | 7 | 449 | 4.59e-17 | 83.6 |
MS.gene011799.t1 | MTR_7g014330 | 25.183 | 409 | 246 | 16 | 31 | 400 | 26 | 413 | 4.89e-17 | 83.6 |
MS.gene011799.t1 | MTR_7g086000 | 27.182 | 401 | 257 | 15 | 62 | 436 | 58 | 449 | 5.71e-17 | 83.2 |
MS.gene011799.t1 | MTR_1g053315 | 23.362 | 351 | 234 | 15 | 64 | 397 | 78 | 410 | 6.72e-17 | 83.2 |
MS.gene011799.t1 | MTR_7g114470 | 22.831 | 438 | 293 | 14 | 32 | 443 | 25 | 443 | 2.89e-16 | 81.3 |
MS.gene011799.t1 | MTR_5g026320 | 23.934 | 422 | 265 | 18 | 48 | 442 | 56 | 448 | 4.85e-16 | 80.5 |
MS.gene011799.t1 | MTR_2g015430 | 24.932 | 369 | 246 | 12 | 40 | 399 | 40 | 386 | 6.83e-16 | 80.1 |
MS.gene011799.t1 | MTR_3g049140 | 26.407 | 231 | 153 | 6 | 213 | 432 | 6 | 230 | 6.84e-16 | 77.8 |
MS.gene011799.t1 | MTR_6g015830 | 23.733 | 434 | 290 | 14 | 25 | 436 | 38 | 452 | 7.54e-16 | 80.1 |
MS.gene011799.t1 | MTR_4g055170 | 26.286 | 350 | 230 | 10 | 64 | 399 | 69 | 404 | 8.54e-16 | 79.7 |
MS.gene011799.t1 | MTR_3g465980 | 25.510 | 294 | 204 | 7 | 59 | 344 | 63 | 349 | 1.44e-15 | 79.0 |
MS.gene011799.t1 | MTR_6g015320 | 26.462 | 359 | 228 | 12 | 63 | 399 | 65 | 409 | 1.49e-15 | 79.0 |
MS.gene011799.t1 | MTR_7g014250 | 23.198 | 444 | 290 | 16 | 29 | 438 | 24 | 450 | 1.99e-15 | 78.6 |
MS.gene011799.t1 | MTR_5g076700 | 22.670 | 397 | 276 | 12 | 61 | 443 | 62 | 441 | 2.12e-15 | 78.6 |
MS.gene011799.t1 | MTR_2g089765 | 23.617 | 470 | 301 | 19 | 3 | 431 | 15 | 467 | 2.79e-15 | 78.2 |
MS.gene011799.t1 | MTR_2g089755 | 26.738 | 374 | 222 | 17 | 64 | 399 | 73 | 432 | 3.12e-15 | 78.2 |
MS.gene011799.t1 | MTR_8g079970 | 21.636 | 379 | 262 | 11 | 61 | 425 | 56 | 413 | 4.24e-15 | 77.4 |
MS.gene011799.t1 | MTR_6g053810 | 24.765 | 319 | 191 | 11 | 64 | 359 | 71 | 363 | 6.49e-15 | 77.0 |
MS.gene011799.t1 | MTR_3g028210 | 25.164 | 457 | 294 | 19 | 4 | 428 | 8 | 448 | 9.30e-15 | 76.6 |
MS.gene011799.t1 | MTR_7g085930 | 24.731 | 372 | 238 | 13 | 64 | 402 | 59 | 421 | 1.16e-14 | 76.3 |
MS.gene011799.t1 | MTR_7g015860 | 25.979 | 281 | 164 | 9 | 147 | 397 | 147 | 413 | 1.80e-14 | 75.5 |
MS.gene011799.t1 | MTR_8g079980 | 22.472 | 356 | 241 | 11 | 59 | 402 | 54 | 386 | 2.55e-14 | 75.1 |
MS.gene011799.t1 | MTR_1g094790 | 25.778 | 450 | 262 | 24 | 39 | 449 | 32 | 448 | 2.95e-14 | 75.1 |
MS.gene011799.t1 | MTR_7g114490 | 22.430 | 428 | 287 | 15 | 32 | 434 | 24 | 431 | 8.37e-14 | 73.6 |
MS.gene011799.t1 | MTR_5g084850 | 22.778 | 360 | 236 | 15 | 62 | 408 | 57 | 387 | 1.05e-13 | 73.2 |
MS.gene011799.t1 | MTR_3g465880 | 24.407 | 295 | 211 | 7 | 58 | 344 | 64 | 354 | 2.44e-13 | 72.0 |
MS.gene011799.t1 | MTR_7g014230 | 24.138 | 406 | 258 | 14 | 29 | 400 | 26 | 415 | 3.58e-13 | 71.6 |
MS.gene011799.t1 | MTR_7g114520 | 21.124 | 445 | 312 | 15 | 14 | 443 | 23 | 443 | 4.17e-13 | 71.2 |
MS.gene011799.t1 | MTR_2g089650 | 24.297 | 391 | 254 | 17 | 64 | 424 | 65 | 443 | 4.85e-13 | 71.2 |
MS.gene011799.t1 | MTR_7g114960 | 25.000 | 404 | 263 | 18 | 61 | 443 | 60 | 444 | 6.24e-13 | 70.9 |
MS.gene011799.t1 | MTR_7g114560 | 24.308 | 325 | 206 | 13 | 32 | 332 | 24 | 332 | 6.52e-13 | 70.9 |
MS.gene011799.t1 | MTR_7g014160 | 24.528 | 424 | 248 | 16 | 49 | 428 | 60 | 455 | 8.83e-13 | 70.5 |
MS.gene011799.t1 | MTR_7g013850 | 23.037 | 382 | 246 | 15 | 59 | 400 | 63 | 436 | 1.50e-12 | 69.7 |
MS.gene011799.t1 | MTR_1g040315 | 24.359 | 312 | 200 | 12 | 32 | 323 | 23 | 318 | 1.93e-12 | 69.3 |
MS.gene011799.t1 | MTR_7g026880 | 56.863 | 51 | 20 | 1 | 394 | 444 | 2 | 50 | 3.19e-12 | 61.6 |
MS.gene011799.t1 | MTR_7g026870 | 43.662 | 71 | 34 | 2 | 291 | 355 | 81 | 151 | 4.57e-12 | 64.3 |
MS.gene011799.t1 | MTR_0502s0010 | 27.136 | 199 | 123 | 7 | 147 | 332 | 42 | 231 | 7.68e-12 | 65.5 |
MS.gene011799.t1 | MTR_8g467580 | 24.938 | 405 | 247 | 17 | 64 | 443 | 60 | 432 | 2.67e-11 | 65.9 |
MS.gene011799.t1 | MTR_5g090880 | 23.861 | 373 | 226 | 14 | 61 | 397 | 64 | 414 | 7.06e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011799.t1 | AT5G67150 | 40.667 | 450 | 252 | 7 | 1 | 443 | 1 | 442 | 1.27e-111 | 337 |
MS.gene011799.t1 | AT3G50280 | 36.667 | 450 | 273 | 6 | 1 | 446 | 1 | 442 | 1.98e-101 | 310 |
MS.gene011799.t1 | AT3G50300 | 38.293 | 457 | 264 | 8 | 1 | 448 | 1 | 448 | 2.37e-100 | 307 |
MS.gene011799.t1 | AT3G50270 | 38.149 | 443 | 266 | 6 | 6 | 444 | 7 | 445 | 1.09e-97 | 301 |
MS.gene011799.t1 | AT5G67160 | 38.534 | 423 | 233 | 9 | 27 | 442 | 25 | 427 | 2.05e-92 | 286 |
MS.gene011799.t1 | AT5G38130 | 37.558 | 434 | 255 | 7 | 1 | 429 | 21 | 443 | 4.69e-92 | 286 |
MS.gene011799.t1 | AT5G42830 | 35.047 | 428 | 259 | 8 | 27 | 443 | 26 | 445 | 1.18e-83 | 265 |
MS.gene011799.t1 | AT2G39980 | 33.766 | 462 | 247 | 6 | 29 | 443 | 27 | 476 | 1.88e-83 | 265 |
MS.gene011799.t1 | AT5G07850 | 36.490 | 433 | 253 | 9 | 31 | 449 | 31 | 455 | 6.07e-80 | 255 |
MS.gene011799.t1 | AT5G07860 | 35.664 | 429 | 246 | 9 | 31 | 443 | 31 | 445 | 1.14e-78 | 252 |
MS.gene011799.t1 | AT3G50280 | 38.413 | 315 | 188 | 3 | 135 | 446 | 1 | 312 | 2.51e-75 | 238 |
MS.gene011799.t1 | AT5G01210 | 33.406 | 458 | 255 | 7 | 24 | 443 | 20 | 465 | 3.43e-75 | 243 |
MS.gene011799.t1 | AT5G07870 | 35.135 | 444 | 252 | 9 | 31 | 449 | 31 | 463 | 1.09e-74 | 242 |
MS.gene011799.t1 | AT5G23940 | 31.494 | 435 | 273 | 11 | 27 | 443 | 21 | 448 | 1.51e-60 | 205 |
MS.gene011799.t1 | AT3G50290 | 39.925 | 268 | 154 | 4 | 132 | 394 | 4 | 269 | 2.38e-59 | 196 |
MS.gene011799.t1 | AT5G41040 | 28.418 | 373 | 242 | 12 | 61 | 424 | 66 | 422 | 4.52e-27 | 113 |
MS.gene011799.t1 | AT5G41040 | 28.418 | 373 | 242 | 12 | 61 | 424 | 82 | 438 | 4.92e-27 | 113 |
MS.gene011799.t1 | AT5G48930 | 28.645 | 391 | 231 | 15 | 64 | 431 | 56 | 421 | 1.93e-26 | 111 |
MS.gene011799.t1 | AT3G48720 | 27.249 | 389 | 249 | 15 | 62 | 436 | 59 | 427 | 8.18e-26 | 109 |
MS.gene011799.t1 | AT3G29590 | 25.234 | 428 | 301 | 9 | 24 | 438 | 21 | 442 | 1.44e-24 | 106 |
MS.gene011799.t1 | AT2G40230 | 25.362 | 414 | 285 | 8 | 1 | 407 | 1 | 397 | 1.85e-24 | 105 |
MS.gene011799.t1 | AT1G28680 | 26.879 | 346 | 225 | 10 | 64 | 399 | 62 | 389 | 2.05e-23 | 102 |
MS.gene011799.t1 | AT2G19070 | 24.631 | 406 | 263 | 15 | 59 | 436 | 53 | 443 | 7.05e-23 | 101 |
MS.gene011799.t1 | AT5G63560 | 26.649 | 379 | 237 | 14 | 64 | 428 | 61 | 412 | 7.61e-23 | 100 |
MS.gene011799.t1 | AT1G78990 | 26.829 | 369 | 224 | 14 | 51 | 397 | 52 | 396 | 2.21e-22 | 99.8 |
MS.gene011799.t1 | AT1G28680 | 26.936 | 297 | 198 | 7 | 64 | 353 | 62 | 346 | 5.78e-22 | 97.8 |
MS.gene011799.t1 | AT1G24430 | 26.216 | 370 | 230 | 15 | 62 | 420 | 60 | 397 | 1.68e-20 | 94.0 |
MS.gene011799.t1 | AT3G03480 | 26.914 | 405 | 250 | 18 | 32 | 416 | 33 | 411 | 1.91e-19 | 90.9 |
MS.gene011799.t1 | AT5G57840 | 24.784 | 464 | 266 | 21 | 4 | 428 | 3 | 422 | 3.42e-18 | 87.0 |
MS.gene011799.t1 | AT5G39090 | 28.431 | 306 | 187 | 17 | 145 | 431 | 140 | 432 | 6.43e-17 | 83.2 |
MS.gene011799.t1 | AT3G29670 | 25.219 | 456 | 287 | 20 | 3 | 428 | 2 | 433 | 6.64e-17 | 83.2 |
MS.gene011799.t1 | AT1G03940 | 25.369 | 406 | 253 | 16 | 59 | 431 | 61 | 449 | 6.90e-17 | 83.2 |
MS.gene011799.t1 | AT3G30280 | 24.107 | 448 | 273 | 19 | 25 | 443 | 23 | 432 | 9.63e-17 | 82.8 |
MS.gene011799.t1 | AT5G39080 | 22.993 | 461 | 299 | 16 | 14 | 436 | 11 | 453 | 1.04e-16 | 82.8 |
MS.gene011799.t1 | AT3G26040 | 24.378 | 402 | 255 | 16 | 60 | 443 | 55 | 425 | 1.27e-16 | 82.4 |
MS.gene011799.t1 | AT1G27620 | 24.740 | 384 | 258 | 12 | 64 | 436 | 58 | 421 | 2.52e-16 | 81.3 |
MS.gene011799.t1 | AT1G32910 | 23.743 | 358 | 226 | 14 | 64 | 397 | 65 | 399 | 4.30e-16 | 80.9 |
MS.gene011799.t1 | AT5G17540 | 23.797 | 395 | 257 | 13 | 32 | 405 | 23 | 394 | 9.05e-16 | 79.7 |
MS.gene011799.t1 | AT5G07080 | 23.543 | 429 | 287 | 13 | 40 | 448 | 43 | 450 | 3.57e-15 | 77.8 |
MS.gene011799.t1 | AT2G23510 | 23.478 | 345 | 242 | 9 | 64 | 399 | 69 | 400 | 9.44e-15 | 76.6 |
MS.gene011799.t1 | AT5G39050 | 23.175 | 315 | 207 | 10 | 145 | 431 | 145 | 452 | 1.58e-14 | 75.9 |
MS.gene011799.t1 | AT5G16410 | 22.472 | 356 | 231 | 12 | 62 | 397 | 89 | 419 | 1.88e-14 | 75.9 |
MS.gene011799.t1 | AT2G25150 | 24.859 | 354 | 238 | 11 | 61 | 400 | 64 | 403 | 2.69e-14 | 75.1 |
MS.gene011799.t1 | AT3G29635 | 24.611 | 386 | 256 | 15 | 64 | 428 | 67 | 438 | 3.81e-14 | 74.7 |
MS.gene011799.t1 | AT1G03390 | 27.809 | 356 | 217 | 18 | 61 | 397 | 73 | 407 | 3.95e-14 | 74.7 |
MS.gene011799.t1 | AT5G47950 | 23.953 | 430 | 275 | 17 | 32 | 443 | 20 | 415 | 9.27e-14 | 73.2 |
MS.gene011799.t1 | AT5G61160 | 25.000 | 272 | 178 | 10 | 145 | 397 | 139 | 403 | 2.42e-13 | 72.0 |
MS.gene011799.t1 | AT3G47170 | 23.841 | 302 | 200 | 9 | 57 | 335 | 58 | 352 | 3.06e-13 | 72.0 |
MS.gene011799.t1 | AT1G03495 | 27.336 | 289 | 179 | 12 | 59 | 323 | 61 | 342 | 1.51e-12 | 68.9 |
MS.gene011799.t1 | AT5G23970 | 24.716 | 352 | 225 | 14 | 61 | 399 | 51 | 375 | 4.41e-12 | 68.2 |
Find 109 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTCTTTCTTATGAGATTT+TGG | 0.242506 | 8.1:+26748869 | MS.gene011799:CDS |
TGTTCCACTTCCAAGTTCTA+TGG | 0.245627 | 8.1:+26748927 | MS.gene011799:CDS |
TTCCGAAATAATCCTCTTCT+AGG | 0.269532 | 8.1:-26748506 | None:intergenic |
GGATTCTAAGCTTTCTTCTA+AGG | 0.272080 | 8.1:-26748265 | None:intergenic |
GGGATTGGTAACAAGTATAA+TGG | 0.290220 | 8.1:+26748795 | MS.gene011799:CDS |
TTGGTATTGGAATGGGTTGT+TGG | 0.293902 | 8.1:-26747744 | None:intergenic |
GTTTCTTATGTGTTGTTTAT+AGG | 0.297168 | 8.1:+26748459 | MS.gene011799:CDS |
GCAGGAGAGGTTCTAGAGTA+TGG | 0.316001 | 8.1:+26748561 | MS.gene011799:CDS |
GGGGAATGACACTGAGTTCA+TGG | 0.325881 | 8.1:+26748899 | MS.gene011799:CDS |
TACATTCTGATAAGATAATA+AGG | 0.327777 | 8.1:+26748625 | MS.gene011799:CDS |
TTTGTTTAAGATGGTTTATA+TGG | 0.335226 | 8.1:-26747768 | None:intergenic |
TTGCAGACGGCAAGTCGTTT+TGG | 0.346102 | 8.1:+26748100 | MS.gene011799:CDS |
GAAACATCTTCTTGTGGATC+AGG | 0.367065 | 8.1:-26748441 | None:intergenic |
CCCCTAGAAGAGGATTATTT+CGG | 0.368115 | 8.1:+26748504 | MS.gene011799:CDS |
TTGGAATTTCAATATCGTTT+GGG | 0.375437 | 8.1:-26748200 | None:intergenic |
TATATGGTTTGGTATTGGAA+TGG | 0.381013 | 8.1:-26747752 | None:intergenic |
AAAGGTTCTTTCGGCTAACT+TGG | 0.384480 | 8.1:-26748286 | None:intergenic |
TGGTTTATATGGTTTGGTAT+TGG | 0.385182 | 8.1:-26747757 | None:intergenic |
AAGCGCTATTATCTCACGTT+TGG | 0.385318 | 8.1:+26748394 | MS.gene011799:CDS |
TGTGAAATGAAAGGTTCTTT+CGG | 0.390221 | 8.1:-26748295 | None:intergenic |
TTAAGATGGTTTATATGGTT+TGG | 0.398195 | 8.1:-26747763 | None:intergenic |
ATTGGAATTTCAATATCGTT+TGG | 0.400486 | 8.1:-26748201 | None:intergenic |
AGCTTTCTTCTAAGGAGCCT+TGG | 0.410094 | 8.1:-26748257 | None:intergenic |
TTTGGCATTTCGTTAATTCA+TGG | 0.411811 | 8.1:+26748118 | MS.gene011799:CDS |
AGGAAAGTGTTTGTTTAAGA+TGG | 0.419599 | 8.1:-26747777 | None:intergenic |
TGGTTTCAAGATGGATGAAT+TGG | 0.425848 | 8.1:-26747699 | None:intergenic |
TTAAGTGACGGCGTCTTCAT+TGG | 0.436912 | 8.1:+26748057 | MS.gene011799:CDS |
TTGGTTGTGACATAGCTTCA+TGG | 0.443685 | 8.1:-26748011 | None:intergenic |
TAAGGAATCATTACGAGTCT+TGG | 0.444628 | 8.1:+26748643 | MS.gene011799:CDS |
ATATGGTTTGGTATTGGAAT+GGG | 0.445755 | 8.1:-26747751 | None:intergenic |
TCAAAAGCAAACGCCGAAGC+TGG | 0.446381 | 8.1:+26748342 | MS.gene011799:CDS |
TTATGATTGTTGTTGTCAAT+TGG | 0.450057 | 8.1:-26747634 | None:intergenic |
GAGGTGTATAGTTTGATTGA+AGG | 0.450138 | 8.1:-26747948 | None:intergenic |
ACTGGTGGAGATCACTTTGA+TGG | 0.452170 | 8.1:-26747599 | None:intergenic |
AACTTCTTTCCACCCCTCGC+TGG | 0.454179 | 8.1:+26747808 | MS.gene011799:CDS |
TCCGAAATAATCCTCTTCTA+GGG | 0.454875 | 8.1:-26748505 | None:intergenic |
TGGAATCGGAAAAGTTGCTT+TGG | 0.455281 | 8.1:+26748581 | MS.gene011799:CDS |
TTTGTGAAAGGGAAGTGTAT+TGG | 0.457281 | 8.1:-26748219 | None:intergenic |
CACCAAGGTTGTTGCAAATG+AGG | 0.458808 | 8.1:-26747879 | None:intergenic |
GGATTGGTAACAAGTATAAT+GGG | 0.461227 | 8.1:+26748796 | MS.gene011799:CDS |
GCATCATTTCCCATAGAACT+TGG | 0.464131 | 8.1:-26748937 | None:intergenic |
GGGAAAATTACAGTGTTTGC+TGG | 0.464637 | 8.1:+26748816 | MS.gene011799:CDS |
GGGAACCAACGTTGAAATGA+AGG | 0.474068 | 8.1:-26748180 | None:intergenic |
AATTGGTGCTTGAATTGTAC+TGG | 0.484057 | 8.1:-26747617 | None:intergenic |
GAAAAGAAGGCCTGCTTGGA+TGG | 0.486070 | 8.1:-26747719 | None:intergenic |
ATCCCACTTCGAACTGCCAC+AGG | 0.501391 | 8.1:-26748777 | None:intergenic |
TGGGTTGTTGGTGGAAAAGA+AGG | 0.501427 | 8.1:-26747732 | None:intergenic |
TCATGGTCACAAATCTCAAA+AGG | 0.504161 | 8.1:+26748135 | MS.gene011799:CDS |
GTTCCACTTCCAAGTTCTAT+GGG | 0.509409 | 8.1:+26748928 | MS.gene011799:CDS |
TTTCTCCTTTGTGAAATGAA+AGG | 0.510402 | 8.1:-26748304 | None:intergenic |
GTGGCAGTTCGAAGTGGGAT+TGG | 0.513271 | 8.1:+26748780 | MS.gene011799:CDS |
GGGTGGAAAGAAGTTGAGAG+TGG | 0.516551 | 8.1:-26747800 | None:intergenic |
GTATTGGAATGGGTTGTTGG+TGG | 0.516749 | 8.1:-26747741 | None:intergenic |
CCACTTGGAGGACTACCACT+TGG | 0.530738 | 8.1:-26748687 | None:intergenic |
TCCCTCATTTGCAACAACCT+TGG | 0.531337 | 8.1:+26747877 | MS.gene011799:CDS |
TTTCCCATAGAACTTGGAAG+TGG | 0.534045 | 8.1:-26748931 | None:intergenic |
GAGGTTCTAGAGTATGGAAT+CGG | 0.537759 | 8.1:+26748567 | MS.gene011799:CDS |
TAGCAATCACTTGTTGTCCA+AGG | 0.538515 | 8.1:+26748718 | MS.gene011799:CDS |
AACTCCCTTCATTTCAACGT+TGG | 0.545872 | 8.1:+26748175 | MS.gene011799:CDS |
GAAAATTGAATTAACACCAT+GGG | 0.549693 | 8.1:+26747672 | MS.gene011799:CDS |
GGTGGAAAAGAAGGCCTGCT+TGG | 0.549803 | 8.1:-26747723 | None:intergenic |
CGTCACTTAACTCCGTTACC+TGG | 0.550388 | 8.1:-26748044 | None:intergenic |
GCTAACGAATTACCACTTGG+AGG | 0.558087 | 8.1:-26748699 | None:intergenic |
ACAACCAACTCTAGGAGTCC+AGG | 0.567424 | 8.1:+26748026 | MS.gene011799:CDS |
TCTAGGGGCGGAATCAACCT+TGG | 0.569302 | 8.1:-26748489 | None:intergenic |
TGCAACCACGTTGTTGCAGA+CGG | 0.570748 | 8.1:+26748087 | MS.gene011799:CDS |
GTGTTTGCTGGTGCTGAAGA+AGG | 0.574224 | 8.1:+26748828 | MS.gene011799:CDS |
GGAACCAACGTTGAAATGAA+GGG | 0.576282 | 8.1:-26748179 | None:intergenic |
CTACCACTTGGAAACAACCT+TGG | 0.580849 | 8.1:-26748675 | None:intergenic |
GTTGATTCCGCCCCTAGAAG+AGG | 0.580936 | 8.1:+26748494 | MS.gene011799:CDS |
AGCCTGTGGCAGTTCGAAGT+GGG | 0.585379 | 8.1:+26748775 | MS.gene011799:CDS |
ACCAAGGTTGTTGCAAATGA+GGG | 0.585413 | 8.1:-26747878 | None:intergenic |
CATCTTGAAACCATCCAAGC+AGG | 0.586408 | 8.1:+26747709 | MS.gene011799:CDS |
GCTATGTCACAACCAACTCT+AGG | 0.588026 | 8.1:+26748018 | MS.gene011799:CDS |
CTGCTTGGATGGTTTCAAGA+TGG | 0.588861 | 8.1:-26747708 | None:intergenic |
TAGAACTTGGAAGTGGAACA+TGG | 0.589628 | 8.1:-26748924 | None:intergenic |
TGGAAAGAAGTTGAGAGTGG+AGG | 0.590316 | 8.1:-26747797 | None:intergenic |
ACATAAGAAACATCTTCTTG+TGG | 0.596961 | 8.1:-26748447 | None:intergenic |
CCGAAATAATCCTCTTCTAG+GGG | 0.597381 | 8.1:-26748504 | None:intergenic |
AACTCTAGGAGTCCAGGTAA+CGG | 0.604904 | 8.1:+26748032 | MS.gene011799:CDS |
GTTACCTGGACTCCTAGAGT+TGG | 0.609941 | 8.1:-26748030 | None:intergenic |
AGAAAATTGAATTAACACCA+TGG | 0.610904 | 8.1:+26747671 | MS.gene011799:CDS |
TGTTTATAGGTGTTAGACCA+AGG | 0.611467 | 8.1:+26748472 | MS.gene011799:CDS |
AAGAACCTTTCATTTCACAA+AGG | 0.619016 | 8.1:+26748299 | MS.gene011799:CDS |
ACAAGACGACCAGCGAGGGG+TGG | 0.619470 | 8.1:-26747817 | None:intergenic |
AAGCCTGTGGCAGTTCGAAG+TGG | 0.622477 | 8.1:+26748774 | MS.gene011799:CDS |
ACTGTTGTGAGGATGAAAGC+AGG | 0.624888 | 8.1:+26748543 | MS.gene011799:CDS |
TATTACAAGACGACCAGCGA+GGG | 0.630336 | 8.1:-26747821 | None:intergenic |
AAATAATCCTCTTCTAGGGG+CGG | 0.632202 | 8.1:-26748501 | None:intergenic |
GGATTATTTCGGAAACGCAG+TGG | 0.636378 | 8.1:+26748515 | MS.gene011799:CDS |
TTATTTCGGAAACGCAGTGG+TGG | 0.651714 | 8.1:+26748518 | MS.gene011799:CDS |
ATTGCTAACGAATTACCACT+TGG | 0.655593 | 8.1:-26748702 | None:intergenic |
AGTGCAAAATACAACGGTCG+CGG | 0.659619 | 8.1:+26747921 | MS.gene011799:CDS |
TGGTGCTTGAATTGTACTGG+TGG | 0.661054 | 8.1:-26747614 | None:intergenic |
TGTGAGGATGAAAGCAGGAG+AGG | 0.662636 | 8.1:+26748548 | MS.gene011799:CDS |
ACACCAAGGTTGTTTCCAAG+TGG | 0.665409 | 8.1:+26748672 | MS.gene011799:CDS |
AAAACAGAATCACAAAACCA+AGG | 0.668777 | 8.1:+26748240 | MS.gene011799:CDS |
ATTACAAGACGACCAGCGAG+GGG | 0.669009 | 8.1:-26747820 | None:intergenic |
CAGGTAACGGAGTTAAGTGA+CGG | 0.674400 | 8.1:+26748045 | MS.gene011799:CDS |
TGGATGAATTGGAGATCCCA+TGG | 0.679279 | 8.1:-26747688 | None:intergenic |
TTTCACAAAGGAGAAAATCG+CGG | 0.682651 | 8.1:+26748311 | MS.gene011799:CDS |
CAGTGGTGGTTACTGTTGTG+AGG | 0.691041 | 8.1:+26748532 | MS.gene011799:CDS |
GTTGCAAATGAGGGAACATG+TGG | 0.700469 | 8.1:-26747869 | None:intergenic |
CCAAGTGGTAGTCCTCCAAG+TGG | 0.727113 | 8.1:+26748687 | MS.gene011799:CDS |
TGCCACAGTGCAAAATACAA+CGG | 0.729193 | 8.1:+26747915 | MS.gene011799:CDS |
ACTTGCCGTCTGCAACAACG+TGG | 0.730274 | 8.1:-26748092 | None:intergenic |
CATGGACGAATAGTGCACCA+AGG | 0.738412 | 8.1:-26747894 | None:intergenic |
TTATTACAAGACGACCAGCG+AGG | 0.755763 | 8.1:-26747822 | None:intergenic |
AGTCTTGGTTAAGAACACCA+AGG | 0.764465 | 8.1:+26748658 | MS.gene011799:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACATTCTGATAAGATAATA+AGG | + | chr8.1:26748625-26748644 | MS.gene011799:CDS | 20.0% |
!!! | TTTGTTTAAGATGGTTTATA+TGG | - | chr8.1:26747771-26747790 | None:intergenic | 20.0% |
! | AGAAAATTGAATTAACACCA+TGG | + | chr8.1:26747671-26747690 | MS.gene011799:CDS | 25.0% |
! | ATTGGAATTTCAATATCGTT+TGG | - | chr8.1:26748204-26748223 | None:intergenic | 25.0% |
! | GAAAATTGAATTAACACCAT+GGG | + | chr8.1:26747672-26747691 | MS.gene011799:CDS | 25.0% |
! | TTAAGATGGTTTATATGGTT+TGG | - | chr8.1:26747766-26747785 | None:intergenic | 25.0% |
! | TTGGAATTTCAATATCGTTT+GGG | - | chr8.1:26748203-26748222 | None:intergenic | 25.0% |
!! | TTATGATTGTTGTTGTCAAT+TGG | - | chr8.1:26747637-26747656 | None:intergenic | 25.0% |
!! | TTGTCTTTCTTATGAGATTT+TGG | + | chr8.1:26748869-26748888 | MS.gene011799:CDS | 25.0% |
!!! | GTTTCTTATGTGTTGTTTAT+AGG | + | chr8.1:26748459-26748478 | MS.gene011799:CDS | 25.0% |
AAAACAGAATCACAAAACCA+AGG | + | chr8.1:26748240-26748259 | MS.gene011799:CDS | 30.0% | |
AAGAACCTTTCATTTCACAA+AGG | + | chr8.1:26748299-26748318 | MS.gene011799:CDS | 30.0% | |
ACATAAGAAACATCTTCTTG+TGG | - | chr8.1:26748450-26748469 | None:intergenic | 30.0% | |
TGTGAAATGAAAGGTTCTTT+CGG | - | chr8.1:26748298-26748317 | None:intergenic | 30.0% | |
TTTCTCCTTTGTGAAATGAA+AGG | - | chr8.1:26748307-26748326 | None:intergenic | 30.0% | |
TTTGGCATTTCGTTAATTCA+TGG | + | chr8.1:26748118-26748137 | MS.gene011799:CDS | 30.0% | |
! | GGATTGGTAACAAGTATAAT+GGG | + | chr8.1:26748796-26748815 | MS.gene011799:CDS | 30.0% |
! | TCTTTCTTATGAGATTTTGG+AGG | + | chr8.1:26748872-26748891 | MS.gene011799:CDS | 30.0% |
!! | AAGGGAGTTTTGATATTTTG+TGG | - | chr8.1:26748164-26748183 | None:intergenic | 30.0% |
!! | AGGAAAGTGTTTGTTTAAGA+TGG | - | chr8.1:26747780-26747799 | None:intergenic | 30.0% |
!! | AGGGAGTTTTGATATTTTGT+GGG | - | chr8.1:26748163-26748182 | None:intergenic | 30.0% |
!! | ATATGGTTTGGTATTGGAAT+GGG | - | chr8.1:26747754-26747773 | None:intergenic | 30.0% |
!! | TATATGGTTTGGTATTGGAA+TGG | - | chr8.1:26747755-26747774 | None:intergenic | 30.0% |
!! | TGGTTTATATGGTTTGGTAT+TGG | - | chr8.1:26747760-26747779 | None:intergenic | 30.0% |
!! | TTTTTGGCAATGATTTTGGT+TGG | + | chr8.1:26748748-26748767 | MS.gene011799:CDS | 30.0% |
!!! | GATGTTTTTGGCAATGATTT+TGG | + | chr8.1:26748744-26748763 | MS.gene011799:CDS | 30.0% |
!!! | GTGATTCTGTTTTTGTGAAA+GGG | - | chr8.1:26748233-26748252 | None:intergenic | 30.0% |
!!! | TGTGATTCTGTTTTTGTGAA+AGG | - | chr8.1:26748234-26748253 | None:intergenic | 30.0% |
!!! | TTTTGGCAATGATTTTGGTT+GGG | + | chr8.1:26748749-26748768 | MS.gene011799:CDS | 30.0% |
AAAAATGAGTGGACAATTGG+AGG | - | chr8.1:26747970-26747989 | None:intergenic | 35.0% | |
ATTGCTAACGAATTACCACT+TGG | - | chr8.1:26748705-26748724 | None:intergenic | 35.0% | |
GAGGTGTATAGTTTGATTGA+AGG | - | chr8.1:26747951-26747970 | None:intergenic | 35.0% | |
GGAAAAAATGAGTGGACAAT+TGG | - | chr8.1:26747973-26747992 | None:intergenic | 35.0% | |
GGATTCTAAGCTTTCTTCTA+AGG | - | chr8.1:26748268-26748287 | None:intergenic | 35.0% | |
GGTTAAGTGGAAAAAATGAG+TGG | - | chr8.1:26747981-26748000 | None:intergenic | 35.0% | |
TAAGGAATCATTACGAGTCT+TGG | + | chr8.1:26748643-26748662 | MS.gene011799:CDS | 35.0% | |
TCATGGTCACAAATCTCAAA+AGG | + | chr8.1:26748135-26748154 | MS.gene011799:CDS | 35.0% | |
TCCGAAATAATCCTCTTCTA+GGG | - | chr8.1:26748508-26748527 | None:intergenic | 35.0% | |
TGGTTTCAAGATGGATGAAT+TGG | - | chr8.1:26747702-26747721 | None:intergenic | 35.0% | |
TGTTTATAGGTGTTAGACCA+AGG | + | chr8.1:26748472-26748491 | MS.gene011799:CDS | 35.0% | |
TTCCGAAATAATCCTCTTCT+AGG | - | chr8.1:26748509-26748528 | None:intergenic | 35.0% | |
TTGCCAAAAACATCAAACCT+TGG | - | chr8.1:26748738-26748757 | None:intergenic | 35.0% | |
TTTCACAAAGGAGAAAATCG+CGG | + | chr8.1:26748311-26748330 | MS.gene011799:CDS | 35.0% | |
! | AATTGGTGCTTGAATTGTAC+TGG | - | chr8.1:26747620-26747639 | None:intergenic | 35.0% |
! | GGGATTGGTAACAAGTATAA+TGG | + | chr8.1:26748795-26748814 | MS.gene011799:CDS | 35.0% |
! | TAGCTTCATGGTTTTTAACG+CGG | - | chr8.1:26748002-26748021 | None:intergenic | 35.0% |
! | TGTCCAAGGTTTGATGTTTT+TGG | + | chr8.1:26748732-26748751 | MS.gene011799:CDS | 35.0% |
! | TTTGTGAAAGGGAAGTGTAT+TGG | - | chr8.1:26748222-26748241 | None:intergenic | 35.0% |
!! | TATGAGATTTTGGAGGCTTT+GGG | + | chr8.1:26748879-26748898 | MS.gene011799:CDS | 35.0% |
!! | TTATGAGATTTTGGAGGCTT+TGG | + | chr8.1:26748878-26748897 | MS.gene011799:CDS | 35.0% |
!!! | AGGTTTTTTGCAACGAACAA+CGG | - | chr8.1:26748424-26748443 | None:intergenic | 35.0% |
!!! | TTTGGCAATGATTTTGGTTG+GGG | + | chr8.1:26748750-26748769 | MS.gene011799:CDS | 35.0% |
AAAGGTTCTTTCGGCTAACT+TGG | - | chr8.1:26748289-26748308 | None:intergenic | 40.0% | |
AACTCCCTTCATTTCAACGT+TGG | + | chr8.1:26748175-26748194 | MS.gene011799:CDS | 40.0% | |
AAGCGCTATTATCTCACGTT+TGG | + | chr8.1:26748394-26748413 | MS.gene011799:CDS | 40.0% | |
ACCAAGGTTGTTGCAAATGA+GGG | - | chr8.1:26747881-26747900 | None:intergenic | 40.0% | |
AGTCTTGGTTAAGAACACCA+AGG | + | chr8.1:26748658-26748677 | MS.gene011799:CDS | 40.0% | |
CCCCTAGAAGAGGATTATTT+CGG | + | chr8.1:26748504-26748523 | MS.gene011799:CDS | 40.0% | |
CCGAAATAATCCTCTTCTAG+GGG | - | chr8.1:26748507-26748526 | None:intergenic | 40.0% | |
GAAACATCTTCTTGTGGATC+AGG | - | chr8.1:26748444-26748463 | None:intergenic | 40.0% | |
GGAACCAACGTTGAAATGAA+GGG | - | chr8.1:26748182-26748201 | None:intergenic | 40.0% | |
GGGAAAATTACAGTGTTTGC+TGG | + | chr8.1:26748816-26748835 | MS.gene011799:CDS | 40.0% | |
GTTCCACTTCCAAGTTCTAT+GGG | + | chr8.1:26748928-26748947 | MS.gene011799:CDS | 40.0% | |
TAGAACTTGGAAGTGGAACA+TGG | - | chr8.1:26748927-26748946 | None:intergenic | 40.0% | |
TGCCACAGTGCAAAATACAA+CGG | + | chr8.1:26747915-26747934 | MS.gene011799:CDS | 40.0% | |
TGGAATCGGAAAAGTTGCTT+TGG | + | chr8.1:26748581-26748600 | MS.gene011799:CDS | 40.0% | |
TGTTCCACTTCCAAGTTCTA+TGG | + | chr8.1:26748927-26748946 | MS.gene011799:CDS | 40.0% | |
TTGGTTGTGACATAGCTTCA+TGG | - | chr8.1:26748014-26748033 | None:intergenic | 40.0% | |
TTTCCCATAGAACTTGGAAG+TGG | - | chr8.1:26748934-26748953 | None:intergenic | 40.0% | |
! | AAATAATCCTCTTCTAGGGG+CGG | - | chr8.1:26748504-26748523 | None:intergenic | 40.0% |
! | AGTTTTCTCTGTTCCAGCTT+CGG | - | chr8.1:26748358-26748377 | None:intergenic | 40.0% |
! | TGGTTTTTAACGCGGTTAAG+TGG | - | chr8.1:26747994-26748013 | None:intergenic | 40.0% |
! | TTGTATTTTGCACTGTGGCA+TGG | - | chr8.1:26747915-26747934 | None:intergenic | 40.0% |
!! | ATGAGATTTTGGAGGCTTTG+GGG | + | chr8.1:26748880-26748899 | MS.gene011799:CDS | 40.0% |
!! | GAGGTTCTAGAGTATGGAAT+CGG | + | chr8.1:26748567-26748586 | MS.gene011799:CDS | 40.0% |
!! | TAGCAATCACTTGTTGTCCA+AGG | + | chr8.1:26748718-26748737 | MS.gene011799:CDS | 40.0% |
!! | TTGGTATTGGAATGGGTTGT+TGG | - | chr8.1:26747747-26747766 | None:intergenic | 40.0% |
ACTGGTGGAGATCACTTTGA+TGG | - | chr8.1:26747602-26747621 | None:intergenic | 45.0% | |
ACTGTTGTGAGGATGAAAGC+AGG | + | chr8.1:26748543-26748562 | MS.gene011799:CDS | 45.0% | |
AGTGCAAAATACAACGGTCG+CGG | + | chr8.1:26747921-26747940 | MS.gene011799:CDS | 45.0% | |
CACCAAGGTTGTTGCAAATG+AGG | - | chr8.1:26747882-26747901 | None:intergenic | 45.0% | |
CATCTTGAAACCATCCAAGC+AGG | + | chr8.1:26747709-26747728 | MS.gene011799:CDS | 45.0% | |
CTACCACTTGGAAACAACCT+TGG | - | chr8.1:26748678-26748697 | None:intergenic | 45.0% | |
CTGCTTGGATGGTTTCAAGA+TGG | - | chr8.1:26747711-26747730 | None:intergenic | 45.0% | |
GCTAACGAATTACCACTTGG+AGG | - | chr8.1:26748702-26748721 | None:intergenic | 45.0% | |
GCTATGTCACAACCAACTCT+AGG | + | chr8.1:26748018-26748037 | MS.gene011799:CDS | 45.0% | |
GGATTATTTCGGAAACGCAG+TGG | + | chr8.1:26748515-26748534 | MS.gene011799:CDS | 45.0% | |
GGGAACCAACGTTGAAATGA+AGG | - | chr8.1:26748183-26748202 | None:intergenic | 45.0% | |
GTTGCAAATGAGGGAACATG+TGG | - | chr8.1:26747872-26747891 | None:intergenic | 45.0% | |
TATTACAAGACGACCAGCGA+GGG | - | chr8.1:26747824-26747843 | None:intergenic | 45.0% | |
TCCCTCATTTGCAACAACCT+TGG | + | chr8.1:26747877-26747896 | MS.gene011799:CDS | 45.0% | |
TGGAAAGAAGTTGAGAGTGG+AGG | - | chr8.1:26747800-26747819 | None:intergenic | 45.0% | |
TGGATGAATTGGAGATCCCA+TGG | - | chr8.1:26747691-26747710 | None:intergenic | 45.0% | |
TGGTGCTTGAATTGTACTGG+TGG | - | chr8.1:26747617-26747636 | None:intergenic | 45.0% | |
TTAAGTGACGGCGTCTTCAT+TGG | + | chr8.1:26748057-26748076 | MS.gene011799:CDS | 45.0% | |
TTATTACAAGACGACCAGCG+AGG | - | chr8.1:26747825-26747844 | None:intergenic | 45.0% | |
TTATTTCGGAAACGCAGTGG+TGG | + | chr8.1:26748518-26748537 | MS.gene011799:CDS | 45.0% | |
! | AACTCTAGGAGTCCAGGTAA+CGG | + | chr8.1:26748032-26748051 | MS.gene011799:CDS | 45.0% |
! | ACACCAAGGTTGTTTCCAAG+TGG | + | chr8.1:26748672-26748691 | MS.gene011799:CDS | 45.0% |
! | AGCTTTCTTCTAAGGAGCCT+TGG | - | chr8.1:26748260-26748279 | None:intergenic | 45.0% |
! | GACCGTTGTATTTTGCACTG+TGG | - | chr8.1:26747920-26747939 | None:intergenic | 45.0% |
! | TGGGTTGTTGGTGGAAAAGA+AGG | - | chr8.1:26747735-26747754 | None:intergenic | 45.0% |
!! | CAGGTAACGGAGTTAAGTGA+CGG | + | chr8.1:26748045-26748064 | MS.gene011799:CDS | 45.0% |
!! | GTATTGGAATGGGTTGTTGG+TGG | - | chr8.1:26747744-26747763 | None:intergenic | 45.0% |
ATTACAAGACGACCAGCGAG+GGG | - | chr8.1:26747823-26747842 | None:intergenic | 50.0% | |
CAGTGGTGGTTACTGTTGTG+AGG | + | chr8.1:26748532-26748551 | MS.gene011799:CDS | 50.0% | |
CATGGACGAATAGTGCACCA+AGG | - | chr8.1:26747897-26747916 | None:intergenic | 50.0% | |
CGTCACTTAACTCCGTTACC+TGG | - | chr8.1:26748047-26748066 | None:intergenic | 50.0% | |
GAAAAGAAGGCCTGCTTGGA+TGG | - | chr8.1:26747722-26747741 | None:intergenic | 50.0% | |
GGGGAATGACACTGAGTTCA+TGG | + | chr8.1:26748899-26748918 | MS.gene011799:CDS | 50.0% | |
GGGTGGAAAGAAGTTGAGAG+TGG | - | chr8.1:26747803-26747822 | None:intergenic | 50.0% | |
GTTACCTGGACTCCTAGAGT+TGG | - | chr8.1:26748033-26748052 | None:intergenic | 50.0% | |
TCAAAAGCAAACGCCGAAGC+TGG | + | chr8.1:26748342-26748361 | MS.gene011799:CDS | 50.0% | |
TGCAACCACGTTGTTGCAGA+CGG | + | chr8.1:26748087-26748106 | MS.gene011799:CDS | 50.0% | |
TGTGAGGATGAAAGCAGGAG+AGG | + | chr8.1:26748548-26748567 | MS.gene011799:CDS | 50.0% | |
! | ACAACCAACTCTAGGAGTCC+AGG | + | chr8.1:26748026-26748045 | MS.gene011799:CDS | 50.0% |
! | GTGTTTGCTGGTGCTGAAGA+AGG | + | chr8.1:26748828-26748847 | MS.gene011799:CDS | 50.0% |
! | TTGCAGACGGCAAGTCGTTT+TGG | + | chr8.1:26748100-26748119 | MS.gene011799:CDS | 50.0% |
!! | GCAGGAGAGGTTCTAGAGTA+TGG | + | chr8.1:26748561-26748580 | MS.gene011799:CDS | 50.0% |
!! | TTTTGGTTGGGGAAAGCCTG+TGG | + | chr8.1:26748761-26748780 | MS.gene011799:CDS | 50.0% |
AACTTCTTTCCACCCCTCGC+TGG | + | chr8.1:26747808-26747827 | MS.gene011799:CDS | 55.0% | |
AAGCCTGTGGCAGTTCGAAG+TGG | + | chr8.1:26748774-26748793 | MS.gene011799:CDS | 55.0% | |
ACTTGCCGTCTGCAACAACG+TGG | - | chr8.1:26748095-26748114 | None:intergenic | 55.0% | |
AGCCTGTGGCAGTTCGAAGT+GGG | + | chr8.1:26748775-26748794 | MS.gene011799:CDS | 55.0% | |
ATCCCACTTCGAACTGCCAC+AGG | - | chr8.1:26748780-26748799 | None:intergenic | 55.0% | |
CCAAGTGGTAGTCCTCCAAG+TGG | + | chr8.1:26748687-26748706 | MS.gene011799:CDS | 55.0% | |
CCACTTGGAGGACTACCACT+TGG | - | chr8.1:26748690-26748709 | None:intergenic | 55.0% | |
GGTGGAAAAGAAGGCCTGCT+TGG | - | chr8.1:26747726-26747745 | None:intergenic | 55.0% | |
GTGGCAGTTCGAAGTGGGAT+TGG | + | chr8.1:26748780-26748799 | MS.gene011799:CDS | 55.0% | |
TCTAGGGGCGGAATCAACCT+TGG | - | chr8.1:26748492-26748511 | None:intergenic | 55.0% | |
! | GTTGATTCCGCCCCTAGAAG+AGG | + | chr8.1:26748494-26748513 | MS.gene011799:CDS | 55.0% |
ACAAGACGACCAGCGAGGGG+TGG | - | chr8.1:26747820-26747839 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 26747592 | 26748956 | 26747592 | ID=MS.gene011799 |
chr8.1 | mRNA | 26747592 | 26748956 | 26747592 | ID=MS.gene011799.t1;Parent=MS.gene011799 |
chr8.1 | exon | 26747592 | 26748956 | 26747592 | ID=MS.gene011799.t1.exon1;Parent=MS.gene011799.t1 |
chr8.1 | CDS | 26747592 | 26748956 | 26747592 | ID=cds.MS.gene011799.t1;Parent=MS.gene011799.t1 |
Gene Sequence |
Protein sequence |