Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90496.t1 | XP_024638427.1 | 73.3 | 460 | 109 | 6 | 1 | 454 | 1 | 452 | 1.10E-178 | 636.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90496.t1 | Q9SND9 | 36.7 | 444 | 268 | 5 | 10 | 449 | 5 | 439 | 1.1e-75 | 285.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90496.t1 | A0A072UP59 | 68.6 | 455 | 132 | 3 | 1 | 453 | 1 | 446 | 1.1e-174 | 622.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051702 | MS.gene90496 | 0.818501 | 1.90E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90496.t1 | MTR_4g094835 | 71.868 | 455 | 117 | 3 | 1 | 453 | 1 | 446 | 0.0 | 679 |
MS.gene90496.t1 | MTR_4g094838 | 71.335 | 457 | 101 | 7 | 4 | 454 | 1 | 433 | 0.0 | 630 |
MS.gene90496.t1 | MTR_4g094832 | 73.475 | 377 | 92 | 3 | 81 | 454 | 60 | 431 | 0.0 | 561 |
MS.gene90496.t1 | MTR_4g094842 | 60.352 | 454 | 165 | 7 | 1 | 449 | 1 | 444 | 0.0 | 543 |
MS.gene90496.t1 | MTR_0190s0020 | 58.407 | 452 | 171 | 8 | 1 | 449 | 1 | 438 | 0.0 | 523 |
MS.gene90496.t1 | MTR_8g041770 | 57.522 | 452 | 174 | 8 | 1 | 449 | 1 | 437 | 0.0 | 518 |
MS.gene90496.t1 | MTR_3g088420 | 57.871 | 451 | 166 | 10 | 1 | 449 | 1 | 429 | 2.42e-178 | 506 |
MS.gene90496.t1 | MTR_4g094828 | 56.484 | 455 | 175 | 10 | 1 | 445 | 1 | 442 | 1.14e-177 | 505 |
MS.gene90496.t1 | MTR_4g022720 | 56.195 | 452 | 174 | 8 | 1 | 449 | 1 | 431 | 5.00e-176 | 500 |
MS.gene90496.t1 | MTR_8g079710 | 57.174 | 453 | 168 | 10 | 1 | 444 | 1 | 436 | 1.02e-174 | 497 |
MS.gene90496.t1 | MTR_4g022825 | 55.580 | 457 | 174 | 10 | 1 | 449 | 1 | 436 | 7.99e-174 | 494 |
MS.gene90496.t1 | MTR_4g022800 | 55.556 | 459 | 173 | 10 | 1 | 449 | 1 | 438 | 3.43e-173 | 493 |
MS.gene90496.t1 | MTR_4g022290 | 57.143 | 455 | 167 | 12 | 1 | 445 | 1 | 437 | 1.03e-172 | 492 |
MS.gene90496.t1 | MTR_4g022670 | 54.367 | 458 | 179 | 10 | 1 | 449 | 1 | 437 | 3.39e-169 | 483 |
MS.gene90496.t1 | MTR_3g026310 | 53.879 | 464 | 179 | 11 | 1 | 449 | 1 | 444 | 4.17e-167 | 478 |
MS.gene90496.t1 | MTR_7g026860 | 54.048 | 457 | 179 | 10 | 1 | 449 | 1 | 434 | 4.75e-164 | 470 |
MS.gene90496.t1 | MTR_4g022760 | 49.015 | 457 | 161 | 9 | 1 | 449 | 1 | 393 | 8.00e-141 | 409 |
MS.gene90496.t1 | MTR_6g016815 | 43.016 | 451 | 167 | 13 | 1 | 449 | 15 | 377 | 7.67e-106 | 319 |
MS.gene90496.t1 | MTR_4g094825 | 85.143 | 175 | 22 | 2 | 20 | 194 | 80 | 250 | 1.42e-94 | 291 |
MS.gene90496.t1 | MTR_4g094825 | 84.516 | 155 | 14 | 1 | 300 | 454 | 248 | 392 | 6.75e-85 | 266 |
MS.gene90496.t1 | MTR_3g101900 | 39.443 | 431 | 240 | 9 | 28 | 449 | 26 | 444 | 5.05e-93 | 288 |
MS.gene90496.t1 | MTR_3g102020 | 38.147 | 464 | 249 | 11 | 3 | 449 | 5 | 447 | 4.22e-92 | 286 |
MS.gene90496.t1 | MTR_3g101930 | 38.673 | 437 | 234 | 9 | 32 | 449 | 30 | 451 | 1.34e-90 | 283 |
MS.gene90496.t1 | MTR_3g102010 | 38.095 | 462 | 249 | 11 | 4 | 449 | 7 | 447 | 3.69e-88 | 276 |
MS.gene90496.t1 | MTR_3g101960 | 37.093 | 461 | 255 | 10 | 3 | 448 | 5 | 445 | 7.23e-87 | 273 |
MS.gene90496.t1 | MTR_3g101970 | 37.150 | 428 | 236 | 8 | 32 | 449 | 29 | 433 | 2.33e-84 | 266 |
MS.gene90496.t1 | MTR_5g081960 | 33.128 | 486 | 241 | 10 | 30 | 454 | 25 | 487 | 2.80e-79 | 254 |
MS.gene90496.t1 | MTR_3g070170 | 35.637 | 463 | 236 | 10 | 30 | 453 | 31 | 470 | 1.38e-78 | 252 |
MS.gene90496.t1 | MTR_8g040780 | 58.454 | 207 | 81 | 3 | 242 | 445 | 20 | 224 | 1.36e-76 | 239 |
MS.gene90496.t1 | MTR_8g040760 | 54.626 | 227 | 88 | 5 | 1 | 224 | 1 | 215 | 9.01e-76 | 236 |
MS.gene90496.t1 | MTR_4g015180 | 32.649 | 487 | 244 | 11 | 27 | 449 | 17 | 483 | 1.63e-69 | 229 |
MS.gene90496.t1 | MTR_7g026850 | 54.286 | 175 | 70 | 3 | 37 | 209 | 12 | 178 | 6.25e-58 | 189 |
MS.gene90496.t1 | MTR_3g102030 | 33.007 | 306 | 168 | 4 | 106 | 407 | 48 | 320 | 1.58e-48 | 169 |
MS.gene90496.t1 | MTR_6g045553 | 27.917 | 480 | 298 | 11 | 2 | 450 | 10 | 472 | 2.10e-47 | 170 |
MS.gene90496.t1 | MTR_7g026770 | 49.724 | 181 | 64 | 4 | 157 | 335 | 132 | 287 | 2.10e-46 | 162 |
MS.gene90496.t1 | MTR_6g034485 | 56.154 | 130 | 52 | 2 | 202 | 331 | 1 | 125 | 8.74e-45 | 152 |
MS.gene90496.t1 | MTR_6g034495 | 58.594 | 128 | 44 | 2 | 72 | 194 | 37 | 160 | 8.88e-44 | 151 |
MS.gene90496.t1 | MTR_7g026830 | 68.293 | 82 | 26 | 0 | 100 | 181 | 16 | 97 | 2.80e-33 | 121 |
MS.gene90496.t1 | MTR_4g007540 | 26.142 | 394 | 253 | 12 | 64 | 442 | 56 | 426 | 4.73e-29 | 118 |
MS.gene90496.t1 | MTR_8g096530 | 29.752 | 363 | 212 | 13 | 57 | 405 | 52 | 385 | 2.38e-28 | 117 |
MS.gene90496.t1 | MTR_3g098980 | 27.179 | 390 | 244 | 15 | 57 | 435 | 59 | 419 | 3.51e-28 | 116 |
MS.gene90496.t1 | MTR_3g026950 | 24.939 | 409 | 254 | 15 | 61 | 438 | 51 | 437 | 3.74e-26 | 110 |
MS.gene90496.t1 | MTR_3g049150 | 25.740 | 439 | 269 | 14 | 37 | 440 | 21 | 437 | 6.19e-26 | 110 |
MS.gene90496.t1 | MTR_2g105330 | 23.869 | 398 | 259 | 10 | 64 | 438 | 56 | 432 | 1.04e-25 | 108 |
MS.gene90496.t1 | MTR_2g064495 | 23.499 | 383 | 260 | 9 | 64 | 434 | 56 | 417 | 1.02e-24 | 106 |
MS.gene90496.t1 | MTR_8g075610 | 24.685 | 397 | 251 | 15 | 64 | 442 | 47 | 413 | 1.90e-24 | 105 |
MS.gene90496.t1 | MTR_4g097090 | 25.000 | 440 | 258 | 16 | 40 | 434 | 28 | 440 | 2.33e-24 | 105 |
MS.gene90496.t1 | MTR_4g127650 | 22.697 | 445 | 287 | 14 | 22 | 434 | 21 | 440 | 1.21e-22 | 100 |
MS.gene90496.t1 | MTR_7g027175 | 25.954 | 393 | 258 | 12 | 57 | 440 | 61 | 429 | 2.38e-21 | 96.3 |
MS.gene90496.t1 | MTR_3g071320 | 25.893 | 336 | 205 | 12 | 49 | 362 | 42 | 355 | 4.54e-21 | 95.5 |
MS.gene90496.t1 | MTR_1g081660 | 23.649 | 444 | 294 | 16 | 32 | 453 | 31 | 451 | 6.48e-21 | 95.1 |
MS.gene90496.t1 | MTR_6g015850 | 24.520 | 469 | 301 | 15 | 2 | 442 | 6 | 449 | 8.26e-21 | 95.1 |
MS.gene90496.t1 | MTR_7g026780 | 46.296 | 108 | 32 | 3 | 342 | 449 | 26 | 107 | 9.35e-21 | 87.8 |
MS.gene90496.t1 | MTR_5g026320 | 25.481 | 416 | 244 | 16 | 61 | 448 | 71 | 448 | 1.28e-19 | 91.3 |
MS.gene90496.t1 | MTR_7g026800 | 37.654 | 162 | 69 | 6 | 231 | 390 | 29 | 160 | 3.15e-19 | 85.9 |
MS.gene90496.t1 | MTR_6g015815 | 24.153 | 443 | 284 | 16 | 30 | 442 | 32 | 452 | 5.77e-19 | 89.4 |
MS.gene90496.t1 | MTR_3g087640 | 25.983 | 458 | 282 | 19 | 30 | 447 | 29 | 469 | 7.32e-19 | 89.4 |
MS.gene90496.t1 | MTR_5g084870 | 25.879 | 398 | 230 | 17 | 33 | 403 | 17 | 376 | 1.01e-18 | 88.6 |
MS.gene90496.t1 | MTR_2g089765 | 24.583 | 480 | 290 | 20 | 3 | 437 | 15 | 467 | 1.21e-18 | 88.6 |
MS.gene90496.t1 | MTR_3g086020 | 26.634 | 413 | 228 | 20 | 62 | 454 | 59 | 416 | 1.52e-18 | 87.8 |
MS.gene90496.t1 | MTR_4g022780 | 36.364 | 165 | 73 | 6 | 231 | 393 | 30 | 164 | 1.54e-18 | 83.6 |
MS.gene90496.t1 | MTR_6g015315 | 25.938 | 320 | 200 | 8 | 155 | 442 | 141 | 455 | 1.56e-18 | 88.2 |
MS.gene90496.t1 | MTR_2g089755 | 26.585 | 410 | 247 | 20 | 32 | 403 | 37 | 430 | 1.66e-18 | 88.2 |
MS.gene90496.t1 | MTR_7g084940 | 25.691 | 362 | 226 | 12 | 55 | 402 | 60 | 392 | 4.50e-18 | 86.7 |
MS.gene90496.t1 | MTR_3g049140 | 27.511 | 229 | 140 | 6 | 230 | 440 | 14 | 234 | 5.40e-18 | 84.0 |
MS.gene90496.t1 | MTR_7g014330 | 24.631 | 406 | 253 | 15 | 30 | 402 | 24 | 409 | 9.48e-18 | 85.9 |
MS.gene90496.t1 | MTR_1g040195 | 23.702 | 443 | 257 | 18 | 33 | 447 | 23 | 412 | 1.38e-17 | 85.1 |
MS.gene90496.t1 | MTR_6g015320 | 26.266 | 316 | 188 | 12 | 155 | 440 | 144 | 444 | 2.73e-17 | 84.3 |
MS.gene90496.t1 | MTR_8g012750 | 25.412 | 425 | 239 | 18 | 30 | 402 | 24 | 422 | 4.56e-17 | 83.6 |
MS.gene90496.t1 | MTR_8g079980 | 24.000 | 400 | 240 | 11 | 33 | 403 | 17 | 381 | 1.99e-16 | 81.6 |
MS.gene90496.t1 | MTR_7g015860 | 22.727 | 462 | 283 | 15 | 30 | 447 | 26 | 457 | 2.02e-16 | 81.6 |
MS.gene90496.t1 | MTR_5g076700 | 22.247 | 445 | 287 | 16 | 33 | 447 | 24 | 439 | 2.55e-16 | 81.3 |
MS.gene90496.t1 | MTR_7g085930 | 23.786 | 412 | 249 | 14 | 64 | 429 | 59 | 451 | 2.98e-16 | 81.3 |
MS.gene90496.t1 | MTR_2g089670 | 24.939 | 413 | 246 | 18 | 29 | 402 | 42 | 429 | 5.58e-16 | 80.5 |
MS.gene90496.t1 | MTR_7g014250 | 24.939 | 413 | 243 | 17 | 30 | 402 | 24 | 409 | 7.14e-16 | 80.1 |
MS.gene90496.t1 | MTR_7g114470 | 23.973 | 438 | 269 | 18 | 33 | 437 | 25 | 431 | 1.04e-15 | 79.3 |
MS.gene90496.t1 | MTR_7g086000 | 25.061 | 407 | 264 | 13 | 62 | 442 | 58 | 449 | 1.15e-15 | 79.3 |
MS.gene90496.t1 | MTR_2g089650 | 24.205 | 409 | 272 | 17 | 23 | 403 | 20 | 418 | 3.60e-15 | 77.8 |
MS.gene90496.t1 | MTR_4g013050 | 21.411 | 411 | 248 | 12 | 57 | 444 | 46 | 404 | 5.02e-15 | 77.0 |
MS.gene90496.t1 | MTR_3g450710 | 25.707 | 389 | 217 | 16 | 58 | 407 | 59 | 414 | 5.09e-15 | 77.4 |
MS.gene90496.t1 | MTR_7g014230 | 23.821 | 403 | 260 | 13 | 30 | 402 | 26 | 411 | 7.87e-15 | 76.6 |
MS.gene90496.t1 | MTR_7g014160 | 23.044 | 473 | 288 | 17 | 17 | 434 | 4 | 455 | 8.18e-15 | 76.6 |
MS.gene90496.t1 | MTR_4g055170 | 24.671 | 304 | 206 | 7 | 64 | 361 | 69 | 355 | 8.80e-15 | 76.6 |
MS.gene90496.t1 | MTR_7g014200 | 25.115 | 434 | 237 | 18 | 23 | 402 | 21 | 420 | 9.41e-15 | 76.6 |
MS.gene90496.t1 | MTR_7g014610 | 24.190 | 463 | 275 | 19 | 23 | 434 | 20 | 457 | 1.74e-14 | 75.9 |
MS.gene90496.t1 | MTR_7g114520 | 23.858 | 394 | 248 | 19 | 37 | 410 | 41 | 402 | 4.69e-14 | 74.3 |
MS.gene90496.t1 | MTR_7g114490 | 23.733 | 434 | 259 | 19 | 37 | 440 | 40 | 431 | 6.08e-14 | 74.3 |
MS.gene90496.t1 | MTR_1g053315 | 21.503 | 386 | 270 | 14 | 64 | 434 | 78 | 445 | 6.08e-14 | 73.9 |
MS.gene90496.t1 | MTR_5g090810 | 24.866 | 374 | 226 | 14 | 61 | 403 | 63 | 412 | 9.24e-14 | 73.6 |
MS.gene90496.t1 | MTR_2g089735 | 24.719 | 445 | 286 | 19 | 36 | 447 | 30 | 458 | 2.22e-13 | 72.4 |
MS.gene90496.t1 | MTR_3g112180 | 22.857 | 350 | 242 | 11 | 61 | 401 | 58 | 388 | 2.85e-13 | 72.0 |
MS.gene90496.t1 | MTR_7g056087 | 22.983 | 409 | 267 | 15 | 40 | 419 | 30 | 419 | 3.02e-13 | 71.6 |
MS.gene90496.t1 | MTR_8g467580 | 26.389 | 432 | 247 | 20 | 49 | 449 | 41 | 432 | 3.63e-13 | 71.6 |
MS.gene90496.t1 | MTR_3g028210 | 23.974 | 463 | 298 | 20 | 4 | 434 | 8 | 448 | 3.68e-13 | 71.6 |
MS.gene90496.t1 | MTR_7g085990 | 23.022 | 417 | 246 | 15 | 64 | 429 | 55 | 447 | 3.79e-13 | 71.6 |
MS.gene90496.t1 | MTR_5g090880 | 24.011 | 379 | 232 | 15 | 57 | 403 | 60 | 414 | 6.77e-13 | 70.9 |
MS.gene90496.t1 | MTR_6g053810 | 21.698 | 318 | 208 | 10 | 64 | 365 | 71 | 363 | 8.66e-13 | 70.5 |
MS.gene90496.t1 | MTR_1g040315 | 24.092 | 303 | 194 | 10 | 33 | 320 | 23 | 304 | 1.93e-12 | 69.3 |
MS.gene90496.t1 | MTR_1g094790 | 24.832 | 447 | 258 | 23 | 40 | 449 | 32 | 437 | 6.52e-12 | 67.8 |
MS.gene90496.t1 | MTR_7g026880 | 57.778 | 45 | 19 | 0 | 405 | 449 | 5 | 49 | 1.01e-11 | 60.1 |
MS.gene90496.t1 | MTR_7g013850 | 22.169 | 415 | 255 | 13 | 37 | 402 | 37 | 432 | 1.15e-11 | 67.0 |
MS.gene90496.t1 | MTR_7g084910 | 24.104 | 307 | 182 | 9 | 40 | 319 | 36 | 318 | 1.42e-11 | 66.6 |
MS.gene90496.t1 | MTR_8g467590 | 24.272 | 412 | 249 | 14 | 63 | 449 | 59 | 432 | 2.18e-11 | 65.9 |
MS.gene90496.t1 | MTR_7g026870 | 44.286 | 70 | 33 | 2 | 298 | 361 | 82 | 151 | 6.22e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90496.t1 | AT5G67150 | 41.447 | 456 | 243 | 7 | 2 | 449 | 3 | 442 | 1.00e-117 | 352 |
MS.gene90496.t1 | AT3G50300 | 40.175 | 458 | 250 | 8 | 1 | 449 | 1 | 443 | 2.89e-104 | 318 |
MS.gene90496.t1 | AT3G50270 | 39.866 | 449 | 254 | 8 | 6 | 449 | 7 | 444 | 1.18e-99 | 306 |
MS.gene90496.t1 | AT3G50280 | 36.865 | 453 | 268 | 6 | 1 | 449 | 1 | 439 | 2.63e-99 | 305 |
MS.gene90496.t1 | AT5G38130 | 39.310 | 435 | 247 | 6 | 5 | 434 | 20 | 442 | 6.47e-99 | 304 |
MS.gene90496.t1 | AT5G67160 | 39.627 | 429 | 231 | 8 | 25 | 448 | 22 | 427 | 5.15e-98 | 301 |
MS.gene90496.t1 | AT5G42830 | 35.484 | 434 | 254 | 9 | 28 | 449 | 26 | 445 | 2.64e-83 | 264 |
MS.gene90496.t1 | AT2G39980 | 32.911 | 474 | 240 | 9 | 30 | 449 | 27 | 476 | 1.52e-79 | 255 |
MS.gene90496.t1 | AT5G07850 | 36.721 | 433 | 245 | 10 | 32 | 449 | 31 | 449 | 3.21e-79 | 253 |
MS.gene90496.t1 | AT5G07860 | 36.782 | 435 | 238 | 11 | 32 | 449 | 31 | 445 | 1.81e-78 | 251 |
MS.gene90496.t1 | AT5G01210 | 33.769 | 459 | 247 | 10 | 30 | 449 | 25 | 465 | 1.03e-73 | 239 |
MS.gene90496.t1 | AT5G07870 | 35.440 | 443 | 245 | 9 | 32 | 449 | 31 | 457 | 4.35e-73 | 238 |
MS.gene90496.t1 | AT3G50280 | 38.782 | 312 | 185 | 3 | 141 | 449 | 1 | 309 | 8.35e-72 | 229 |
MS.gene90496.t1 | AT5G23940 | 30.892 | 437 | 280 | 8 | 28 | 450 | 21 | 449 | 1.22e-59 | 203 |
MS.gene90496.t1 | AT3G50290 | 40.672 | 268 | 152 | 3 | 138 | 400 | 4 | 269 | 1.25e-58 | 194 |
MS.gene90496.t1 | AT2G19070 | 25.624 | 441 | 279 | 12 | 35 | 442 | 19 | 443 | 1.68e-27 | 114 |
MS.gene90496.t1 | AT3G48720 | 26.761 | 355 | 229 | 12 | 57 | 403 | 54 | 385 | 1.05e-26 | 112 |
MS.gene90496.t1 | AT3G29590 | 25.508 | 443 | 288 | 13 | 24 | 444 | 20 | 442 | 4.27e-26 | 110 |
MS.gene90496.t1 | AT5G41040 | 26.343 | 391 | 249 | 11 | 57 | 434 | 62 | 426 | 1.50e-25 | 108 |
MS.gene90496.t1 | AT5G41040 | 26.343 | 391 | 249 | 11 | 57 | 434 | 78 | 442 | 1.78e-25 | 108 |
MS.gene90496.t1 | AT5G48930 | 24.694 | 409 | 262 | 11 | 49 | 437 | 39 | 421 | 2.28e-25 | 108 |
MS.gene90496.t1 | AT1G78990 | 27.957 | 372 | 222 | 13 | 51 | 403 | 52 | 396 | 1.90e-22 | 99.8 |
MS.gene90496.t1 | AT3G29635 | 23.341 | 437 | 278 | 14 | 30 | 434 | 27 | 438 | 1.04e-21 | 97.8 |
MS.gene90496.t1 | AT5G57840 | 27.952 | 415 | 239 | 18 | 49 | 434 | 39 | 422 | 1.56e-21 | 97.1 |
MS.gene90496.t1 | AT5G63560 | 24.552 | 391 | 250 | 14 | 57 | 434 | 54 | 412 | 8.84e-21 | 94.7 |
MS.gene90496.t1 | AT5G39080 | 23.529 | 459 | 294 | 16 | 20 | 442 | 16 | 453 | 2.76e-20 | 93.6 |
MS.gene90496.t1 | AT1G31490 | 26.277 | 411 | 255 | 15 | 61 | 454 | 59 | 438 | 7.31e-20 | 92.0 |
MS.gene90496.t1 | AT1G24430 | 23.969 | 388 | 236 | 16 | 55 | 426 | 53 | 397 | 2.35e-19 | 90.5 |
MS.gene90496.t1 | AT5G23970 | 25.000 | 436 | 277 | 17 | 28 | 450 | 20 | 418 | 1.93e-18 | 87.8 |
MS.gene90496.t1 | AT5G39090 | 25.571 | 438 | 285 | 19 | 20 | 437 | 16 | 432 | 9.47e-18 | 85.9 |
MS.gene90496.t1 | AT3G29670 | 24.123 | 456 | 298 | 18 | 3 | 434 | 2 | 433 | 1.35e-17 | 85.1 |
MS.gene90496.t1 | AT5G47950 | 23.312 | 459 | 298 | 16 | 1 | 449 | 1 | 415 | 1.47e-17 | 85.1 |
MS.gene90496.t1 | AT5G39050 | 24.920 | 313 | 200 | 12 | 151 | 435 | 145 | 450 | 1.81e-17 | 85.1 |
MS.gene90496.t1 | AT1G24420 | 25.445 | 393 | 242 | 16 | 74 | 453 | 75 | 429 | 2.30e-17 | 84.3 |
MS.gene90496.t1 | AT1G24420 | 25.445 | 393 | 242 | 16 | 74 | 453 | 75 | 429 | 2.30e-17 | 84.3 |
MS.gene90496.t1 | AT3G30280 | 25.349 | 430 | 250 | 21 | 1 | 403 | 1 | 386 | 2.58e-17 | 84.3 |
MS.gene90496.t1 | AT2G40230 | 24.221 | 417 | 272 | 14 | 1 | 403 | 1 | 387 | 2.84e-17 | 84.3 |
MS.gene90496.t1 | AT1G28680 | 26.667 | 255 | 169 | 6 | 157 | 403 | 143 | 387 | 3.19e-17 | 84.0 |
MS.gene90496.t1 | AT3G26040 | 24.755 | 408 | 252 | 16 | 60 | 449 | 55 | 425 | 4.90e-17 | 83.6 |
MS.gene90496.t1 | AT1G28680 | 27.143 | 210 | 140 | 4 | 157 | 359 | 143 | 346 | 7.77e-16 | 79.3 |
MS.gene90496.t1 | AT5G61160 | 26.688 | 311 | 196 | 14 | 151 | 440 | 139 | 438 | 3.28e-15 | 77.8 |
MS.gene90496.t1 | AT4G15390 | 23.944 | 355 | 220 | 15 | 4 | 347 | 8 | 323 | 1.60e-14 | 75.9 |
MS.gene90496.t1 | AT4G15390 | 23.944 | 355 | 220 | 15 | 4 | 347 | 8 | 323 | 1.60e-14 | 75.9 |
MS.gene90496.t1 | AT5G07080 | 25.402 | 311 | 190 | 12 | 42 | 333 | 44 | 331 | 4.52e-14 | 74.3 |
MS.gene90496.t1 | AT5G16410 | 25.915 | 328 | 204 | 13 | 95 | 403 | 112 | 419 | 5.57e-14 | 74.3 |
MS.gene90496.t1 | AT3G47170 | 23.607 | 305 | 198 | 10 | 57 | 341 | 63 | 352 | 6.46e-13 | 70.9 |
MS.gene90496.t1 | AT5G47980 | 25.362 | 414 | 241 | 20 | 63 | 449 | 60 | 432 | 4.15e-12 | 68.2 |
MS.gene90496.t1 | AT1G65450 | 22.314 | 363 | 242 | 13 | 55 | 402 | 63 | 400 | 9.95e-12 | 67.0 |
MS.gene90496.t1 | AT2G25150 | 24.904 | 261 | 182 | 8 | 155 | 406 | 148 | 403 | 1.28e-11 | 67.0 |
Find 93 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGATTCTTTCAGCTAAAT+TGG | 0.161367 | 8.3:-23625669 | None:intergenic |
GTGTCTTTCTTATGAGATTT+TGG | 0.228049 | 8.3:+23626252 | MS.gene90496:CDS |
CGTTGAAATGAAGGGAGTTT+TGG | 0.257934 | 8.3:-23625554 | None:intergenic |
TCATTCTTCCCACCCTTTGC+AGG | 0.261438 | 8.3:+23625173 | MS.gene90496:CDS |
TGTGGGAACCTTTCGAGATT+TGG | 0.269190 | 8.3:-23625526 | None:intergenic |
GGGAAATGATGTTGAGTTCT+TGG | 0.297726 | 8.3:+23626282 | MS.gene90496:CDS |
TTTGGCATTTCGTTAATTCT+TGG | 0.304274 | 8.3:+23625501 | MS.gene90496:CDS |
GTGGGAACCTTTCGAGATTT+GGG | 0.309319 | 8.3:-23625525 | None:intergenic |
TACAATCTGATGAGAAAATA+AGG | 0.315586 | 8.3:+23626008 | MS.gene90496:CDS |
GGAAACGCAGTAGTGGTTAA+TGG | 0.325663 | 8.3:+23625908 | MS.gene90496:CDS |
GGTGGAAAAGAAGGCCTCTT+TGG | 0.329077 | 8.3:-23625091 | None:intergenic |
TGAGATGGTTGATTTGGTTT+TGG | 0.333677 | 8.3:-23625127 | None:intergenic |
AAGCACTATTATCTCATGTT+TGG | 0.349361 | 8.3:+23625777 | MS.gene90496:CDS |
TAAGGAACCATTACGAATCT+TGG | 0.357996 | 8.3:+23626026 | MS.gene90496:CDS |
TTTGTTTGAGATGGTTGATT+TGG | 0.369144 | 8.3:-23625133 | None:intergenic |
ACCAAGGATGATTCCACCTT+TGG | 0.373650 | 8.3:+23625871 | MS.gene90496:CDS |
ATTGGAATTTCAATATCGTT+TGG | 0.377241 | 8.3:-23625584 | None:intergenic |
TTGGAATTTCAATATCGTTT+GGG | 0.377876 | 8.3:-23625583 | None:intergenic |
TTGTAGACGCCAAGTCGTTT+TGG | 0.392431 | 8.3:+23625483 | MS.gene90496:CDS |
AGCTTTCTTCTGAGGAGTCT+TGG | 0.397249 | 8.3:-23625640 | None:intergenic |
TGTTGTGGATATCACCTTGA+TGG | 0.409513 | 8.3:-23624964 | None:intergenic |
AAAACCAACTCTAGCAATTC+AGG | 0.414621 | 8.3:+23625409 | MS.gene90496:CDS |
TTAAGTGACGGCATCTTCAT+TGG | 0.417429 | 8.3:+23625440 | MS.gene90496:CDS |
CCTTTGGAAGAAGATTATTT+CGG | 0.422258 | 8.3:+23625887 | MS.gene90496:CDS |
TGTGTGAAAGGGAAGCGTAT+TGG | 0.429614 | 8.3:-23625602 | None:intergenic |
CAGTCACATTACTTAGAACT+AGG | 0.433385 | 8.3:-23626307 | None:intergenic |
GTTTGTGGTGTCGTTGTGTT+GGG | 0.434146 | 8.3:-23625210 | None:intergenic |
CATTCTTCCCACCCTTTGCA+GGG | 0.439523 | 8.3:+23625174 | MS.gene90496:CDS |
TCCAAAGGTGGAATCATCCT+TGG | 0.454320 | 8.3:-23625872 | None:intergenic |
TGTTTGTGGTGTCGTTGTGT+TGG | 0.462700 | 8.3:-23625211 | None:intergenic |
TTTGGTTAGGAATGGGTTGG+TGG | 0.465905 | 8.3:-23625109 | None:intergenic |
CCGAAATAATCTTCTTCCAA+AGG | 0.467292 | 8.3:-23625887 | None:intergenic |
AGATTATTATTGTTGTCAAT+TGG | 0.472545 | 8.3:-23624999 | None:intergenic |
GGGAACCAACGTTGAAATGA+AGG | 0.474068 | 8.3:-23625563 | None:intergenic |
GACAATTGGAGGTGTGTAGT+TGG | 0.479530 | 8.3:-23625339 | None:intergenic |
TGGAAAGTGTTTGTTTGAGA+TGG | 0.485281 | 8.3:-23625142 | None:intergenic |
TTCTCAACCAAGATTCGTAA+TGG | 0.489014 | 8.3:-23626033 | None:intergenic |
GAGGTTCTAGAGTGTGAAAT+CGG | 0.491146 | 8.3:+23625950 | MS.gene90496:CDS |
AACGAAATGCCAAAACGACT+TGG | 0.492743 | 8.3:-23625492 | None:intergenic |
GAATGGGTTGGTGGAAAAGA+AGG | 0.503869 | 8.3:-23625100 | None:intergenic |
TGTGATTGTATTTGTGTGAA+AGG | 0.505410 | 8.3:-23625614 | None:intergenic |
CTTCTTCATGGATTCCATCA+AGG | 0.511613 | 8.3:+23624950 | None:intergenic |
AATGGTGTGAGGATGAAAGC+AGG | 0.512088 | 8.3:+23625926 | MS.gene90496:CDS |
GTTACCTGAATTGCTAGAGT+TGG | 0.515092 | 8.3:-23625413 | None:intergenic |
TGGTTTCAAGTGGAAGGAAT+CGG | 0.519621 | 8.3:-23625067 | None:intergenic |
GAGGTGTGTAGTTGGATTGA+AGG | 0.522441 | 8.3:-23625331 | None:intergenic |
TTTGGATGGTTTCAAGTGGA+AGG | 0.524015 | 8.3:-23625073 | None:intergenic |
GAAAAGAAGGCCTCTTTGGA+TGG | 0.529505 | 8.3:-23625087 | None:intergenic |
GTGATTGTATTTGTGTGAAA+GGG | 0.534325 | 8.3:-23625613 | None:intergenic |
CTCCCACTTCGAAACGCCAC+AGG | 0.534418 | 8.3:-23626160 | None:intergenic |
GGATTCTAAGCTTTCTTCTG+AGG | 0.535259 | 8.3:-23625648 | None:intergenic |
TTCCGAAGTGGTAGTTCGCT+AGG | 0.540203 | 8.3:+23626067 | MS.gene90496:CDS |
ACCGAGGTTGTTGCAAATGA+TGG | 0.541381 | 8.3:-23625261 | None:intergenic |
GATTACAAGACGCCCTGCAA+AGG | 0.543778 | 8.3:-23625186 | None:intergenic |
AGCCTGTGGCGTTTCGAAGT+GGG | 0.545492 | 8.3:+23626158 | MS.gene90496:CDS |
AACTCCCTTCATTTCAACGT+TGG | 0.545872 | 8.3:+23625558 | MS.gene90496:CDS |
GTGGCGTTTCGAAGTGGGAG+TGG | 0.549176 | 8.3:+23626163 | MS.gene90496:CDS |
ATGGTGTGAGGATGAAAGCA+GGG | 0.551554 | 8.3:+23625927 | MS.gene90496:CDS |
GTGTTTGCTGGTGCTGAAGA+AGG | 0.553326 | 8.3:+23626211 | MS.gene90496:CDS |
ATTACAAGACGCCCTGCAAA+GGG | 0.555357 | 8.3:-23625185 | None:intergenic |
TTCGCTAGGTGGTAATATGT+TGG | 0.564328 | 8.3:+23626081 | MS.gene90496:CDS |
AAATAATCTTCTTCCAAAGG+TGG | 0.566011 | 8.3:-23625884 | None:intergenic |
TGGTGCTTGAATTGTTGTTG+TGG | 0.571268 | 8.3:-23624979 | None:intergenic |
GGAACCAACGTTGAAATGAA+GGG | 0.576282 | 8.3:-23625562 | None:intergenic |
TCTTGGTCCCAAATCTCGAA+AGG | 0.578370 | 8.3:+23625518 | MS.gene90496:CDS |
AACTCTAGCAATTCAGGTAA+CGG | 0.581378 | 8.3:+23625415 | MS.gene90496:CDS |
GAAAATTGATCTAACACCAT+GGG | 0.583475 | 8.3:+23625040 | MS.gene90496:CDS |
CACCTAGCGAACTACCACTT+CGG | 0.583535 | 8.3:-23626069 | None:intergenic |
CCTCTTTGGATGGTTTCAAG+TGG | 0.585328 | 8.3:-23625077 | None:intergenic |
TCCATCATTTGCAACAACCT+CGG | 0.586818 | 8.3:+23625260 | MS.gene90496:CDS |
ACATAGAAAACATCTTCTTG+TGG | 0.596961 | 8.3:-23625830 | None:intergenic |
GGGTGGGAAGAATGAGAGTG+TGG | 0.597075 | 8.3:-23625165 | None:intergenic |
GGAAGGAATCGGAGATCCCA+TGG | 0.597088 | 8.3:-23625056 | None:intergenic |
AAGCCTGTGGCGTTTCGAAG+TGG | 0.599152 | 8.3:+23626157 | MS.gene90496:CDS |
ACAAGACGCCCTGCAAAGGG+TGG | 0.600540 | 8.3:-23625182 | None:intergenic |
ACACCAACGTTGTTCCGAAG+TGG | 0.610004 | 8.3:+23626055 | MS.gene90496:CDS |
TGGGAAGAATGAGAGTGTGG+TGG | 0.610635 | 8.3:-23625162 | None:intergenic |
TTATTTCGGAAACGCAGTAG+TGG | 0.625782 | 8.3:+23625901 | MS.gene90496:CDS |
AGAAAATTGATCTAACACCA+TGG | 0.626932 | 8.3:+23625039 | MS.gene90496:CDS |
CCACTTGAAACCATCCAAAG+AGG | 0.628828 | 8.3:+23625077 | MS.gene90496:CDS |
CTACCACTTCGGAACAACGT+TGG | 0.629293 | 8.3:-23626058 | None:intergenic |
CAAGACGCCCTGCAAAGGGT+GGG | 0.638377 | 8.3:-23625181 | None:intergenic |
AAGAATCTTCCATTTCACAA+AGG | 0.647468 | 8.3:+23625682 | MS.gene90496:CDS |
TGGTGTGAGGATGAAAGCAG+GGG | 0.647651 | 8.3:+23625928 | MS.gene90496:CDS |
CGAAGTGGTAGTTCGCTAGG+TGG | 0.653912 | 8.3:+23626070 | MS.gene90496:CDS |
CAGGTAACGGAGTTAAGTGA+CGG | 0.655221 | 8.3:+23625428 | MS.gene90496:CDS |
AGCACAAAACACAACTGTCG+CGG | 0.659280 | 8.3:+23625304 | MS.gene90496:CDS |
TGTGAGGATGAAAGCAGGGG+AGG | 0.662636 | 8.3:+23625931 | MS.gene90496:CDS |
CAGTAGTGGTTAATGGTGTG+AGG | 0.690545 | 8.3:+23625915 | MS.gene90496:CDS |
TTTCACAAAGGAGAAAATCG+CGG | 0.713213 | 8.3:+23625694 | MS.gene90496:CDS |
ACTTGGCGTCTACAACAGCG+TGG | 0.778771 | 8.3:-23625475 | None:intergenic |
TGATGATAGATGTTAGACCA+AGG | 0.780037 | 8.3:+23625855 | MS.gene90496:CDS |
CGTGGACGAAGAGTGCACCG+AGG | 0.794757 | 8.3:-23625277 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTAGTTTTATCTGTTT+CGG | - | chr8.3:23625747-23625766 | None:intergenic | 15.0% |
!! | AGATTATTATTGTTGTCAAT+TGG | - | chr8.3:23625002-23625021 | None:intergenic | 20.0% |
! | ATTGGAATTTCAATATCGTT+TGG | - | chr8.3:23625587-23625606 | None:intergenic | 25.0% |
! | TACAATCTGATGAGAAAATA+AGG | + | chr8.3:23626008-23626027 | MS.gene90496:CDS | 25.0% |
! | TTGGAATTTCAATATCGTTT+GGG | - | chr8.3:23625586-23625605 | None:intergenic | 25.0% |
!!! | CACTCATTTTTTACACTTAA+CGG | + | chr8.3:23625362-23625381 | MS.gene90496:CDS | 25.0% |
AAATAATCTTCTTCCAAAGG+TGG | - | chr8.3:23625887-23625906 | None:intergenic | 30.0% | |
AAGAATCTTCCATTTCACAA+AGG | + | chr8.3:23625682-23625701 | MS.gene90496:CDS | 30.0% | |
AAGCACTATTATCTCATGTT+TGG | + | chr8.3:23625777-23625796 | MS.gene90496:CDS | 30.0% | |
ACATAGAAAACATCTTCTTG+TGG | - | chr8.3:23625833-23625852 | None:intergenic | 30.0% | |
AGAAAATTGATCTAACACCA+TGG | + | chr8.3:23625039-23625058 | MS.gene90496:CDS | 30.0% | |
CGTTAAGTGTAAAAAATGAG+TGG | - | chr8.3:23625364-23625383 | None:intergenic | 30.0% | |
GAAAATTGATCTAACACCAT+GGG | + | chr8.3:23625040-23625059 | MS.gene90496:CDS | 30.0% | |
GAAGATTCTTTCAGCTAAAT+TGG | - | chr8.3:23625672-23625691 | None:intergenic | 30.0% | |
GGGAGTGGTAATAAAAATAA+TGG | + | chr8.3:23626178-23626197 | MS.gene90496:CDS | 30.0% | |
GTAAAAAATGAGTGGACAAT+TGG | - | chr8.3:23625356-23625375 | None:intergenic | 30.0% | |
GTGATTGTATTTGTGTGAAA+GGG | - | chr8.3:23625616-23625635 | None:intergenic | 30.0% | |
TGTGATTGTATTTGTGTGAA+AGG | - | chr8.3:23625617-23625636 | None:intergenic | 30.0% | |
TTGCCAAAAACATCAAATCT+CGG | - | chr8.3:23626121-23626140 | None:intergenic | 30.0% | |
TTTGGCATTTCGTTAATTCT+TGG | + | chr8.3:23625501-23625520 | MS.gene90496:CDS | 30.0% | |
! | CCTTTGGAAGAAGATTATTT+CGG | + | chr8.3:23625887-23625906 | MS.gene90496:CDS | 30.0% |
! | GTGTCTTTCTTATGAGATTT+TGG | + | chr8.3:23626252-23626271 | MS.gene90496:CDS | 30.0% |
! | TCTTTCTTATGAGATTTTGG+AGG | + | chr8.3:23626255-23626274 | MS.gene90496:CDS | 30.0% |
! | TTTGTTTGAGATGGTTGATT+TGG | - | chr8.3:23625136-23625155 | None:intergenic | 30.0% |
!! | TTTTTGGCAATGATTTTGGT+TGG | + | chr8.3:23626131-23626150 | MS.gene90496:CDS | 30.0% |
!!! | ATTTGGTTTTGGTTAGGAAT+GGG | - | chr8.3:23625119-23625138 | None:intergenic | 30.0% |
!!! | GATGTTTTTGGCAATGATTT+TGG | + | chr8.3:23626127-23626146 | MS.gene90496:CDS | 30.0% |
!!! | TTTTGGCAATGATTTTGGTT+GGG | + | chr8.3:23626132-23626151 | MS.gene90496:CDS | 30.0% |
AAAAATGAGTGGACAATTGG+AGG | - | chr8.3:23625353-23625372 | None:intergenic | 35.0% | |
AAAACCAACTCTAGCAATTC+AGG | + | chr8.3:23625409-23625428 | MS.gene90496:CDS | 35.0% | |
AACTCTAGCAATTCAGGTAA+CGG | + | chr8.3:23625415-23625434 | MS.gene90496:CDS | 35.0% | |
CCGAAATAATCTTCTTCCAA+AGG | - | chr8.3:23625890-23625909 | None:intergenic | 35.0% | |
GGAAAAATTAGTGTGTTTGC+TGG | + | chr8.3:23626199-23626218 | MS.gene90496:CDS | 35.0% | |
TAAGGAACCATTACGAATCT+TGG | + | chr8.3:23626026-23626045 | MS.gene90496:CDS | 35.0% | |
TGATGATAGATGTTAGACCA+AGG | + | chr8.3:23625855-23625874 | MS.gene90496:CDS | 35.0% | |
TTCTCAACCAAGATTCGTAA+TGG | - | chr8.3:23626036-23626055 | None:intergenic | 35.0% | |
TTTCACAAAGGAGAAAATCG+CGG | + | chr8.3:23625694-23625713 | MS.gene90496:CDS | 35.0% | |
! | CGATTTTCTCCTTTGTGAAA+TGG | - | chr8.3:23625694-23625713 | None:intergenic | 35.0% |
! | TCTCCGAGATTTGATGTTTT+TGG | + | chr8.3:23626115-23626134 | MS.gene90496:CDS | 35.0% |
!! | AAGGGAGTTTTGGTATTTTG+TGG | - | chr8.3:23625547-23625566 | None:intergenic | 35.0% |
!! | AGGGAGTTTTGGTATTTTGT+GGG | - | chr8.3:23625546-23625565 | None:intergenic | 35.0% |
!! | GTTGTTGTTGTTGTTGTTTG+TGG | - | chr8.3:23625228-23625247 | None:intergenic | 35.0% |
!! | TATGAGATTTTGGAGGCTTT+GGG | + | chr8.3:23626262-23626281 | MS.gene90496:CDS | 35.0% |
!! | TGGAAAGTGTTTGTTTGAGA+TGG | - | chr8.3:23625145-23625164 | None:intergenic | 35.0% |
!! | TTATGAGATTTTGGAGGCTT+TGG | + | chr8.3:23626261-23626280 | MS.gene90496:CDS | 35.0% |
!!! | GATTTGGTTTTGGTTAGGAA+TGG | - | chr8.3:23625120-23625139 | None:intergenic | 35.0% |
!!! | TGAGATGGTTGATTTGGTTT+TGG | - | chr8.3:23625130-23625149 | None:intergenic | 35.0% |
!!! | TGGTTGATTTGGTTTTGGTT+AGG | - | chr8.3:23625125-23625144 | None:intergenic | 35.0% |
!!! | TTTGGCAATGATTTTGGTTG+GGG | + | chr8.3:23626133-23626152 | MS.gene90496:CDS | 35.0% |
AACGAAATGCCAAAACGACT+TGG | - | chr8.3:23625495-23625514 | None:intergenic | 40.0% | |
AACTCCCTTCATTTCAACGT+TGG | + | chr8.3:23625558-23625577 | MS.gene90496:CDS | 40.0% | |
GGAACCAACGTTGAAATGAA+GGG | - | chr8.3:23625565-23625584 | None:intergenic | 40.0% | |
GGATTCTAAGCTTTCTTCTG+AGG | - | chr8.3:23625651-23625670 | None:intergenic | 40.0% | |
GGGAAATGATGTTGAGTTCT+TGG | + | chr8.3:23626282-23626301 | MS.gene90496:CDS | 40.0% | |
GTTACCTGAATTGCTAGAGT+TGG | - | chr8.3:23625416-23625435 | None:intergenic | 40.0% | |
TCCATCATTTGCAACAACCT+CGG | + | chr8.3:23625260-23625279 | MS.gene90496:CDS | 40.0% | |
TGTTGTGGATATCACCTTGA+TGG | - | chr8.3:23624967-23624986 | None:intergenic | 40.0% | |
TTAAGTGACGGCATCTTCAT+TGG | + | chr8.3:23625440-23625459 | MS.gene90496:CDS | 40.0% | |
TTATTTCGGAAACGCAGTAG+TGG | + | chr8.3:23625901-23625920 | MS.gene90496:CDS | 40.0% | |
TTCGCTAGGTGGTAATATGT+TGG | + | chr8.3:23626081-23626100 | MS.gene90496:CDS | 40.0% | |
! | CGTTGAAATGAAGGGAGTTT+TGG | - | chr8.3:23625557-23625576 | None:intergenic | 40.0% |
! | TGGTGCTTGAATTGTTGTTG+TGG | - | chr8.3:23624982-23625001 | None:intergenic | 40.0% |
! | TGGTTTCAAGTGGAAGGAAT+CGG | - | chr8.3:23625070-23625089 | None:intergenic | 40.0% |
! | TTTGGATGGTTTCAAGTGGA+AGG | - | chr8.3:23625076-23625095 | None:intergenic | 40.0% |
!! | GAGGTTCTAGAGTGTGAAAT+CGG | + | chr8.3:23625950-23625969 | MS.gene90496:CDS | 40.0% |
AATGGTGTGAGGATGAAAGC+AGG | + | chr8.3:23625926-23625945 | MS.gene90496:CDS | 45.0% | |
ACCAAGGATGATTCCACCTT+TGG | + | chr8.3:23625871-23625890 | MS.gene90496:CDS | 45.0% | |
ACCGAGGTTGTTGCAAATGA+TGG | - | chr8.3:23625264-23625283 | None:intergenic | 45.0% | |
AGCACAAAACACAACTGTCG+CGG | + | chr8.3:23625304-23625323 | MS.gene90496:CDS | 45.0% | |
ATGGTGTGAGGATGAAAGCA+GGG | + | chr8.3:23625927-23625946 | MS.gene90496:CDS | 45.0% | |
ATTACAAGACGCCCTGCAAA+GGG | - | chr8.3:23625188-23625207 | None:intergenic | 45.0% | |
CAGTAGTGGTTAATGGTGTG+AGG | + | chr8.3:23625915-23625934 | MS.gene90496:CDS | 45.0% | |
CCACTTGAAACCATCCAAAG+AGG | + | chr8.3:23625077-23625096 | MS.gene90496:CDS | 45.0% | |
CCTCTTTGGATGGTTTCAAG+TGG | - | chr8.3:23625080-23625099 | None:intergenic | 45.0% | |
GAAAAGAAGGCCTCTTTGGA+TGG | - | chr8.3:23625090-23625109 | None:intergenic | 45.0% | |
GAGGTGTGTAGTTGGATTGA+AGG | - | chr8.3:23625334-23625353 | None:intergenic | 45.0% | |
GGAAACGCAGTAGTGGTTAA+TGG | + | chr8.3:23625908-23625927 | MS.gene90496:CDS | 45.0% | |
GGGAACCAACGTTGAAATGA+AGG | - | chr8.3:23625566-23625585 | None:intergenic | 45.0% | |
GTGGGAACCTTTCGAGATTT+GGG | - | chr8.3:23625528-23625547 | None:intergenic | 45.0% | |
TCCAAAGGTGGAATCATCCT+TGG | - | chr8.3:23625875-23625894 | None:intergenic | 45.0% | |
TCTTGGTCCCAAATCTCGAA+AGG | + | chr8.3:23625518-23625537 | MS.gene90496:CDS | 45.0% | |
TGTGGGAACCTTTCGAGATT+TGG | - | chr8.3:23625529-23625548 | None:intergenic | 45.0% | |
! | AGCTTTCTTCTGAGGAGTCT+TGG | - | chr8.3:23625643-23625662 | None:intergenic | 45.0% |
! | GACAATTGGAGGTGTGTAGT+TGG | - | chr8.3:23625342-23625361 | None:intergenic | 45.0% |
! | GACAGTTGTGTTTTGTGCTG+TGG | - | chr8.3:23625303-23625322 | None:intergenic | 45.0% |
! | TGTGTGAAAGGGAAGCGTAT+TGG | - | chr8.3:23625605-23625624 | None:intergenic | 45.0% |
! | TTGTAGACGCCAAGTCGTTT+TGG | + | chr8.3:23625483-23625502 | MS.gene90496:CDS | 45.0% |
!! | CAGGTAACGGAGTTAAGTGA+CGG | + | chr8.3:23625428-23625447 | MS.gene90496:CDS | 45.0% |
!! | GAATGGGTTGGTGGAAAAGA+AGG | - | chr8.3:23625103-23625122 | None:intergenic | 45.0% |
!! | GTTTGTGGTGTCGTTGTGTT+GGG | - | chr8.3:23625213-23625232 | None:intergenic | 45.0% |
!! | TGTTTGTGGTGTCGTTGTGT+TGG | - | chr8.3:23625214-23625233 | None:intergenic | 45.0% |
!! | TTTGGTTAGGAATGGGTTGG+TGG | - | chr8.3:23625112-23625131 | None:intergenic | 45.0% |
!!! | GGTTTTGGTTAGGAATGGGT+TGG | - | chr8.3:23625115-23625134 | None:intergenic | 45.0% |
ACACCAACGTTGTTCCGAAG+TGG | + | chr8.3:23626055-23626074 | MS.gene90496:CDS | 50.0% | |
CACCTAGCGAACTACCACTT+CGG | - | chr8.3:23626072-23626091 | None:intergenic | 50.0% | |
CATTCTTCCCACCCTTTGCA+GGG | + | chr8.3:23625174-23625193 | MS.gene90496:CDS | 50.0% | |
CTACCACTTCGGAACAACGT+TGG | - | chr8.3:23626061-23626080 | None:intergenic | 50.0% | |
GATTACAAGACGCCCTGCAA+AGG | - | chr8.3:23625189-23625208 | None:intergenic | 50.0% | |
GGTGGAAAAGAAGGCCTCTT+TGG | - | chr8.3:23625094-23625113 | None:intergenic | 50.0% | |
TCATTCTTCCCACCCTTTGC+AGG | + | chr8.3:23625173-23625192 | MS.gene90496:CDS | 50.0% | |
TGGTGTGAGGATGAAAGCAG+GGG | + | chr8.3:23625928-23625947 | MS.gene90496:CDS | 50.0% | |
TTCCGAAGTGGTAGTTCGCT+AGG | + | chr8.3:23626067-23626086 | MS.gene90496:CDS | 50.0% | |
! | GTGTTTGCTGGTGCTGAAGA+AGG | + | chr8.3:23626211-23626230 | MS.gene90496:CDS | 50.0% |
! | TGGGAAGAATGAGAGTGTGG+TGG | - | chr8.3:23625165-23625184 | None:intergenic | 50.0% |
! | TTGTGTTTTGTGCTGTGGCG+TGG | - | chr8.3:23625298-23625317 | None:intergenic | 50.0% |
!! | TTTTGGTTGGGGAAAGCCTG+TGG | + | chr8.3:23626144-23626163 | MS.gene90496:CDS | 50.0% |
AAGCCTGTGGCGTTTCGAAG+TGG | + | chr8.3:23626157-23626176 | MS.gene90496:CDS | 55.0% | |
ACTTGGCGTCTACAACAGCG+TGG | - | chr8.3:23625478-23625497 | None:intergenic | 55.0% | |
AGCCTGTGGCGTTTCGAAGT+GGG | + | chr8.3:23626158-23626177 | MS.gene90496:CDS | 55.0% | |
CGAAGTGGTAGTTCGCTAGG+TGG | + | chr8.3:23626070-23626089 | MS.gene90496:CDS | 55.0% | |
GGAAGGAATCGGAGATCCCA+TGG | - | chr8.3:23625059-23625078 | None:intergenic | 55.0% | |
GGGTGGGAAGAATGAGAGTG+TGG | - | chr8.3:23625168-23625187 | None:intergenic | 55.0% | |
TGTGAGGATGAAAGCAGGGG+AGG | + | chr8.3:23625931-23625950 | MS.gene90496:CDS | 55.0% | |
ACAAGACGCCCTGCAAAGGG+TGG | - | chr8.3:23625185-23625204 | None:intergenic | 60.0% | |
CAAGACGCCCTGCAAAGGGT+GGG | - | chr8.3:23625184-23625203 | None:intergenic | 60.0% | |
CTCCCACTTCGAAACGCCAC+AGG | - | chr8.3:23626163-23626182 | None:intergenic | 60.0% | |
GTGGCGTTTCGAAGTGGGAG+TGG | + | chr8.3:23626163-23626182 | MS.gene90496:CDS | 60.0% | |
! | CGTGGACGAAGAGTGCACCG+AGG | - | chr8.3:23625280-23625299 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 23624957 | 23626321 | 23624957 | ID=MS.gene90496 |
chr8.3 | mRNA | 23624957 | 23626321 | 23624957 | ID=MS.gene90496.t1;Parent=MS.gene90496 |
chr8.3 | exon | 23624957 | 23626321 | 23624957 | ID=MS.gene90496.t1.exon1;Parent=MS.gene90496.t1 |
chr8.3 | CDS | 23624957 | 23626321 | 23624957 | ID=cds.MS.gene90496.t1;Parent=MS.gene90496.t1 |
Gene Sequence |
Protein sequence |