Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87496.t1 | RHN59148.1 | 87.2 | 444 | 55 | 2 | 1 | 443 | 40 | 482 | 1.30E-221 | 778.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87496.t1 | Q9SND9 | 37.2 | 414 | 240 | 9 | 29 | 431 | 25 | 429 | 6.5e-68 | 259.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87496.t1 | G7JUI6 | 87.2 | 444 | 55 | 2 | 1 | 443 | 1 | 443 | 9.5e-222 | 778.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene054277 | MS.gene87496 | 0.850527 | 1.60E-60 | -1.69E-46 |
MS.gene058450 | MS.gene87496 | 0.847205 | 1.34E-59 | -1.69E-46 |
MS.gene059953 | MS.gene87496 | 0.81203 | 5.20E-51 | -1.69E-46 |
MS.gene059955 | MS.gene87496 | 0.830362 | 3.06E-55 | -1.69E-46 |
MS.gene061092 | MS.gene87496 | 0.817097 | 3.93E-52 | -1.69E-46 |
MS.gene061094 | MS.gene87496 | 0.81769 | 2.89E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87496.t1 | MTR_4g022290 | 86.937 | 444 | 56 | 2 | 1 | 443 | 1 | 443 | 0.0 | 787 |
MS.gene87496.t1 | MTR_4g094828 | 82.705 | 451 | 65 | 4 | 1 | 442 | 1 | 447 | 0.0 | 758 |
MS.gene87496.t1 | MTR_8g079710 | 76.286 | 447 | 98 | 8 | 1 | 443 | 1 | 443 | 0.0 | 671 |
MS.gene87496.t1 | MTR_4g094835 | 53.898 | 449 | 192 | 9 | 1 | 441 | 1 | 442 | 1.42e-165 | 474 |
MS.gene87496.t1 | MTR_4g094842 | 52.967 | 455 | 183 | 8 | 1 | 438 | 1 | 441 | 7.71e-160 | 459 |
MS.gene87496.t1 | MTR_0190s0020 | 49.889 | 451 | 205 | 7 | 1 | 442 | 1 | 439 | 2.57e-150 | 435 |
MS.gene87496.t1 | MTR_3g026310 | 49.788 | 472 | 190 | 12 | 1 | 448 | 1 | 449 | 3.44e-148 | 430 |
MS.gene87496.t1 | MTR_4g022825 | 51.515 | 462 | 179 | 13 | 1 | 442 | 1 | 437 | 3.80e-148 | 429 |
MS.gene87496.t1 | MTR_4g094838 | 51.236 | 445 | 185 | 9 | 4 | 437 | 1 | 424 | 8.09e-148 | 428 |
MS.gene87496.t1 | MTR_4g022800 | 50.435 | 460 | 189 | 11 | 1 | 442 | 1 | 439 | 6.02e-146 | 424 |
MS.gene87496.t1 | MTR_8g041770 | 49.446 | 451 | 206 | 9 | 1 | 442 | 1 | 438 | 1.90e-144 | 420 |
MS.gene87496.t1 | MTR_4g022720 | 50.331 | 453 | 193 | 11 | 1 | 442 | 1 | 432 | 2.90e-143 | 417 |
MS.gene87496.t1 | MTR_3g088420 | 49.780 | 454 | 192 | 12 | 1 | 442 | 1 | 430 | 4.52e-143 | 416 |
MS.gene87496.t1 | MTR_7g026860 | 49.782 | 458 | 191 | 11 | 1 | 442 | 1 | 435 | 1.11e-142 | 415 |
MS.gene87496.t1 | MTR_4g022670 | 49.237 | 459 | 195 | 11 | 1 | 442 | 1 | 438 | 4.82e-142 | 414 |
MS.gene87496.t1 | MTR_4g094832 | 56.649 | 376 | 142 | 8 | 74 | 437 | 56 | 422 | 2.22e-141 | 412 |
MS.gene87496.t1 | MTR_4g022760 | 44.105 | 458 | 176 | 10 | 1 | 442 | 1 | 394 | 8.84e-116 | 345 |
MS.gene87496.t1 | MTR_6g016815 | 40.089 | 449 | 179 | 10 | 1 | 443 | 15 | 379 | 2.16e-96 | 295 |
MS.gene87496.t1 | MTR_3g101930 | 36.242 | 447 | 243 | 14 | 25 | 447 | 24 | 452 | 1.42e-78 | 251 |
MS.gene87496.t1 | MTR_3g101900 | 35.714 | 434 | 246 | 12 | 30 | 447 | 29 | 445 | 1.58e-78 | 251 |
MS.gene87496.t1 | MTR_3g102010 | 37.020 | 443 | 248 | 14 | 27 | 450 | 26 | 456 | 6.97e-78 | 249 |
MS.gene87496.t1 | MTR_3g101960 | 37.182 | 433 | 239 | 13 | 25 | 437 | 23 | 442 | 1.51e-77 | 249 |
MS.gene87496.t1 | MTR_3g101970 | 36.967 | 422 | 220 | 13 | 25 | 426 | 23 | 418 | 2.09e-77 | 248 |
MS.gene87496.t1 | MTR_3g102020 | 36.281 | 441 | 247 | 13 | 25 | 444 | 23 | 450 | 1.92e-76 | 246 |
MS.gene87496.t1 | MTR_8g040760 | 53.881 | 219 | 91 | 4 | 1 | 214 | 1 | 214 | 2.99e-74 | 232 |
MS.gene87496.t1 | MTR_5g081960 | 32.359 | 479 | 248 | 14 | 29 | 449 | 25 | 485 | 2.70e-63 | 213 |
MS.gene87496.t1 | MTR_4g094825 | 55.914 | 186 | 76 | 3 | 24 | 204 | 85 | 269 | 1.06e-60 | 203 |
MS.gene87496.t1 | MTR_4g094825 | 40.278 | 216 | 101 | 7 | 226 | 437 | 192 | 383 | 5.10e-35 | 134 |
MS.gene87496.t1 | MTR_4g015180 | 32.068 | 474 | 248 | 13 | 24 | 437 | 20 | 479 | 2.31e-59 | 202 |
MS.gene87496.t1 | MTR_7g026850 | 60.127 | 158 | 60 | 3 | 30 | 186 | 7 | 162 | 1.03e-58 | 191 |
MS.gene87496.t1 | MTR_3g070170 | 31.648 | 455 | 258 | 11 | 21 | 437 | 23 | 462 | 1.19e-58 | 200 |
MS.gene87496.t1 | MTR_8g040780 | 41.880 | 234 | 123 | 5 | 208 | 438 | 2 | 225 | 5.88e-49 | 168 |
MS.gene87496.t1 | MTR_6g034495 | 66.379 | 116 | 37 | 1 | 72 | 185 | 45 | 160 | 2.08e-46 | 158 |
MS.gene87496.t1 | MTR_3g102030 | 33.028 | 327 | 177 | 11 | 79 | 398 | 29 | 320 | 7.99e-43 | 154 |
MS.gene87496.t1 | MTR_6g045553 | 28.982 | 452 | 265 | 12 | 27 | 437 | 31 | 467 | 1.56e-37 | 143 |
MS.gene87496.t1 | MTR_7g026770 | 43.646 | 181 | 79 | 4 | 148 | 328 | 132 | 289 | 7.03e-37 | 137 |
MS.gene87496.t1 | MTR_7g026830 | 70.732 | 82 | 24 | 0 | 91 | 172 | 16 | 97 | 4.32e-35 | 126 |
MS.gene87496.t1 | MTR_6g034485 | 41.791 | 134 | 65 | 3 | 193 | 322 | 1 | 125 | 1.21e-26 | 104 |
MS.gene87496.t1 | MTR_8g075610 | 25.700 | 393 | 247 | 16 | 61 | 434 | 47 | 413 | 9.83e-25 | 106 |
MS.gene87496.t1 | MTR_2g105330 | 25.799 | 407 | 252 | 18 | 48 | 429 | 39 | 420 | 1.30e-22 | 100 |
MS.gene87496.t1 | MTR_2g064495 | 25.799 | 407 | 252 | 18 | 48 | 429 | 39 | 420 | 1.36e-22 | 100 |
MS.gene87496.t1 | MTR_4g007540 | 25.558 | 403 | 253 | 18 | 48 | 426 | 39 | 418 | 1.02e-21 | 97.4 |
MS.gene87496.t1 | MTR_3g026950 | 25.866 | 433 | 259 | 20 | 37 | 430 | 28 | 437 | 1.16e-20 | 94.4 |
MS.gene87496.t1 | MTR_1g040175 | 25.000 | 372 | 236 | 15 | 36 | 394 | 46 | 387 | 2.23e-19 | 90.5 |
MS.gene87496.t1 | MTR_7g085930 | 27.098 | 417 | 243 | 19 | 51 | 424 | 49 | 447 | 4.14e-19 | 90.1 |
MS.gene87496.t1 | MTR_1g081660 | 25.183 | 409 | 230 | 17 | 31 | 401 | 31 | 401 | 4.76e-19 | 89.7 |
MS.gene87496.t1 | MTR_4g097090 | 24.490 | 441 | 258 | 21 | 31 | 426 | 30 | 440 | 6.85e-19 | 89.4 |
MS.gene87496.t1 | MTR_8g096530 | 25.501 | 349 | 219 | 12 | 61 | 393 | 59 | 382 | 1.11e-18 | 88.6 |
MS.gene87496.t1 | MTR_3g049150 | 24.057 | 424 | 253 | 16 | 48 | 430 | 38 | 433 | 1.12e-18 | 88.6 |
MS.gene87496.t1 | MTR_7g114470 | 24.406 | 463 | 273 | 23 | 32 | 446 | 25 | 458 | 1.50e-18 | 88.2 |
MS.gene87496.t1 | MTR_7g085990 | 25.943 | 424 | 255 | 19 | 51 | 434 | 45 | 449 | 3.07e-18 | 87.4 |
MS.gene87496.t1 | MTR_3g098980 | 23.164 | 354 | 224 | 12 | 61 | 395 | 66 | 390 | 7.37e-18 | 85.9 |
MS.gene87496.t1 | MTR_6g015320 | 24.129 | 402 | 248 | 15 | 31 | 396 | 29 | 409 | 1.81e-17 | 84.7 |
MS.gene87496.t1 | MTR_7g014200 | 23.747 | 459 | 267 | 18 | 29 | 432 | 28 | 458 | 2.42e-17 | 84.7 |
MS.gene87496.t1 | MTR_7g027175 | 24.311 | 399 | 256 | 13 | 51 | 431 | 58 | 428 | 3.44e-17 | 84.0 |
MS.gene87496.t1 | MTR_5g076700 | 24.026 | 462 | 275 | 22 | 32 | 446 | 24 | 456 | 5.21e-17 | 83.6 |
MS.gene87496.t1 | MTR_7g014160 | 24.554 | 448 | 264 | 17 | 31 | 426 | 30 | 455 | 5.59e-17 | 83.6 |
MS.gene87496.t1 | MTR_1g040215 | 25.935 | 401 | 223 | 19 | 32 | 394 | 23 | 387 | 6.92e-17 | 83.2 |
MS.gene87496.t1 | MTR_5g090880 | 25.067 | 375 | 213 | 15 | 61 | 394 | 67 | 414 | 1.66e-16 | 82.0 |
MS.gene87496.t1 | MTR_2g089765 | 24.130 | 460 | 257 | 22 | 28 | 426 | 36 | 464 | 1.95e-16 | 82.0 |
MS.gene87496.t1 | MTR_4g127650 | 24.574 | 411 | 245 | 20 | 61 | 434 | 66 | 448 | 5.43e-16 | 80.5 |
MS.gene87496.t1 | MTR_6g015830 | 25.000 | 412 | 233 | 17 | 31 | 396 | 34 | 415 | 7.08e-16 | 80.1 |
MS.gene87496.t1 | MTR_3g028210 | 23.928 | 443 | 277 | 16 | 31 | 432 | 31 | 454 | 5.94e-15 | 77.0 |
MS.gene87496.t1 | MTR_3g087640 | 23.918 | 439 | 273 | 16 | 36 | 426 | 31 | 456 | 6.22e-15 | 77.0 |
MS.gene87496.t1 | MTR_4g013050 | 24.874 | 398 | 215 | 17 | 59 | 426 | 51 | 394 | 9.71e-15 | 76.3 |
MS.gene87496.t1 | MTR_8g012750 | 26.139 | 417 | 240 | 19 | 28 | 393 | 23 | 422 | 1.18e-14 | 76.3 |
MS.gene87496.t1 | MTR_5g090810 | 23.821 | 403 | 234 | 15 | 39 | 394 | 36 | 412 | 1.29e-14 | 76.3 |
MS.gene87496.t1 | MTR_2g089670 | 25.632 | 277 | 166 | 10 | 144 | 393 | 166 | 429 | 2.64e-14 | 75.1 |
MS.gene87496.t1 | MTR_7g014610 | 23.126 | 467 | 266 | 19 | 34 | 436 | 32 | 469 | 3.79e-14 | 74.7 |
MS.gene87496.t1 | MTR_5g090830 | 23.573 | 403 | 235 | 15 | 39 | 394 | 36 | 412 | 6.08e-14 | 73.9 |
MS.gene87496.t1 | MTR_6g015850 | 24.265 | 408 | 238 | 13 | 31 | 396 | 34 | 412 | 6.60e-14 | 73.9 |
MS.gene87496.t1 | MTR_5g084870 | 24.714 | 437 | 267 | 19 | 3 | 418 | 2 | 397 | 9.49e-14 | 73.2 |
MS.gene87496.t1 | MTR_7g114490 | 23.235 | 439 | 266 | 19 | 32 | 431 | 24 | 430 | 1.45e-13 | 73.2 |
MS.gene87496.t1 | MTR_3g071320 | 26.488 | 336 | 188 | 15 | 28 | 330 | 23 | 332 | 1.77e-13 | 72.4 |
MS.gene87496.t1 | MTR_7g056087 | 23.239 | 426 | 267 | 18 | 39 | 431 | 30 | 428 | 8.73e-13 | 70.5 |
MS.gene87496.t1 | MTR_6g053810 | 27.336 | 289 | 184 | 12 | 61 | 336 | 71 | 346 | 9.55e-13 | 70.5 |
MS.gene87496.t1 | MTR_7g114520 | 23.529 | 408 | 244 | 19 | 32 | 401 | 25 | 402 | 1.17e-12 | 70.1 |
MS.gene87496.t1 | MTR_3g086020 | 25.537 | 419 | 246 | 18 | 30 | 426 | 22 | 396 | 1.61e-12 | 69.3 |
MS.gene87496.t1 | MTR_2g089755 | 24.138 | 406 | 260 | 17 | 31 | 397 | 37 | 433 | 3.23e-12 | 68.6 |
MS.gene87496.t1 | MTR_8g079950 | 24.944 | 445 | 262 | 21 | 3 | 418 | 2 | 403 | 5.10e-12 | 68.2 |
MS.gene87496.t1 | MTR_8g079980 | 22.368 | 380 | 251 | 15 | 54 | 418 | 52 | 402 | 1.25e-11 | 66.6 |
MS.gene87496.t1 | MTR_7g026780 | 37.838 | 111 | 40 | 5 | 333 | 442 | 26 | 108 | 1.84e-11 | 61.2 |
MS.gene87496.t1 | MTR_7g013850 | 20.860 | 465 | 276 | 16 | 34 | 432 | 32 | 470 | 2.47e-11 | 65.9 |
MS.gene87496.t1 | MTR_7g084910 | 25.185 | 270 | 164 | 9 | 59 | 309 | 68 | 318 | 5.44e-11 | 64.7 |
MS.gene87496.t1 | MTR_0502s0010 | 26.697 | 221 | 140 | 7 | 102 | 311 | 1 | 210 | 7.13e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87496.t1 | AT5G67150 | 38.393 | 448 | 250 | 12 | 3 | 437 | 4 | 438 | 1.75e-95 | 295 |
MS.gene87496.t1 | AT3G50300 | 38.914 | 442 | 236 | 13 | 1 | 426 | 1 | 424 | 1.45e-86 | 272 |
MS.gene87496.t1 | AT3G50270 | 36.712 | 444 | 250 | 12 | 4 | 431 | 6 | 434 | 7.08e-84 | 265 |
MS.gene87496.t1 | AT3G50280 | 35.811 | 444 | 257 | 11 | 1 | 431 | 1 | 429 | 8.85e-83 | 262 |
MS.gene87496.t1 | AT5G38130 | 37.471 | 435 | 250 | 12 | 1 | 426 | 21 | 442 | 1.82e-82 | 262 |
MS.gene87496.t1 | AT5G67160 | 37.232 | 419 | 236 | 10 | 27 | 437 | 25 | 424 | 7.32e-81 | 257 |
MS.gene87496.t1 | AT5G42830 | 35.765 | 425 | 244 | 12 | 30 | 437 | 29 | 441 | 1.20e-75 | 244 |
MS.gene87496.t1 | AT5G07850 | 35.363 | 427 | 246 | 11 | 30 | 437 | 30 | 445 | 8.11e-73 | 236 |
MS.gene87496.t1 | AT5G07860 | 36.620 | 426 | 238 | 13 | 30 | 437 | 30 | 441 | 4.96e-71 | 232 |
MS.gene87496.t1 | AT5G01210 | 33.038 | 451 | 256 | 11 | 24 | 437 | 20 | 461 | 4.19e-65 | 217 |
MS.gene87496.t1 | AT2G39980 | 32.563 | 476 | 260 | 12 | 11 | 437 | 9 | 472 | 5.22e-65 | 217 |
MS.gene87496.t1 | AT5G07870 | 34.607 | 445 | 249 | 13 | 30 | 444 | 30 | 462 | 8.31e-64 | 213 |
MS.gene87496.t1 | AT3G50280 | 37.013 | 308 | 177 | 7 | 132 | 431 | 1 | 299 | 1.65e-57 | 192 |
MS.gene87496.t1 | AT3G50290 | 38.929 | 280 | 146 | 7 | 126 | 391 | 1 | 269 | 7.38e-51 | 174 |
MS.gene87496.t1 | AT5G23940 | 31.651 | 436 | 255 | 12 | 27 | 434 | 21 | 441 | 3.53e-49 | 175 |
MS.gene87496.t1 | AT5G41040 | 26.546 | 388 | 249 | 15 | 61 | 434 | 69 | 434 | 2.94e-24 | 105 |
MS.gene87496.t1 | AT5G41040 | 26.684 | 386 | 247 | 15 | 61 | 432 | 85 | 448 | 4.10e-24 | 104 |
MS.gene87496.t1 | AT5G48930 | 25.061 | 407 | 250 | 17 | 48 | 426 | 39 | 418 | 2.22e-21 | 96.7 |
MS.gene87496.t1 | AT3G29590 | 22.323 | 439 | 284 | 15 | 31 | 436 | 28 | 442 | 3.03e-20 | 93.2 |
MS.gene87496.t1 | AT1G65450 | 26.479 | 355 | 217 | 16 | 59 | 393 | 70 | 400 | 3.63e-20 | 93.2 |
MS.gene87496.t1 | AT3G48720 | 27.073 | 410 | 249 | 20 | 46 | 433 | 42 | 423 | 6.93e-20 | 92.0 |
MS.gene87496.t1 | AT5G63560 | 26.076 | 395 | 222 | 16 | 61 | 427 | 61 | 413 | 1.51e-19 | 90.9 |
MS.gene87496.t1 | AT2G19070 | 26.316 | 456 | 253 | 22 | 25 | 426 | 9 | 435 | 1.62e-19 | 91.3 |
MS.gene87496.t1 | AT1G78990 | 26.558 | 369 | 219 | 14 | 50 | 394 | 56 | 396 | 9.27e-18 | 85.9 |
MS.gene87496.t1 | AT5G57840 | 25.121 | 414 | 245 | 18 | 48 | 426 | 39 | 422 | 1.20e-17 | 85.5 |
MS.gene87496.t1 | AT1G32910 | 25.069 | 363 | 215 | 12 | 61 | 394 | 65 | 399 | 8.52e-16 | 79.7 |
MS.gene87496.t1 | AT3G29670 | 21.915 | 470 | 325 | 16 | 4 | 452 | 3 | 451 | 8.95e-16 | 79.7 |
MS.gene87496.t1 | AT5G17540 | 24.455 | 413 | 227 | 17 | 32 | 401 | 23 | 393 | 1.36e-15 | 79.3 |
MS.gene87496.t1 | AT3G26040 | 26.526 | 426 | 249 | 17 | 30 | 426 | 20 | 410 | 2.99e-15 | 78.2 |
MS.gene87496.t1 | AT5G16410 | 24.868 | 378 | 218 | 16 | 48 | 394 | 77 | 419 | 3.55e-15 | 77.8 |
MS.gene87496.t1 | AT5G47950 | 24.289 | 387 | 239 | 15 | 57 | 429 | 57 | 403 | 8.47e-15 | 76.6 |
MS.gene87496.t1 | AT1G28680 | 26.211 | 351 | 215 | 13 | 64 | 396 | 65 | 389 | 4.33e-14 | 74.3 |
MS.gene87496.t1 | AT5G23970 | 22.963 | 405 | 249 | 16 | 47 | 427 | 38 | 403 | 5.60e-14 | 73.9 |
MS.gene87496.t1 | AT3G30280 | 24.289 | 387 | 245 | 19 | 60 | 427 | 61 | 418 | 7.96e-14 | 73.6 |
MS.gene87496.t1 | AT1G24420 | 25.223 | 337 | 210 | 13 | 71 | 396 | 76 | 381 | 5.51e-13 | 70.9 |
MS.gene87496.t1 | AT1G24420 | 25.223 | 337 | 210 | 13 | 71 | 396 | 76 | 381 | 5.51e-13 | 70.9 |
MS.gene87496.t1 | AT1G28680 | 26.910 | 301 | 184 | 10 | 64 | 349 | 65 | 344 | 1.62e-12 | 69.3 |
MS.gene87496.t1 | AT3G47170 | 23.279 | 305 | 179 | 10 | 61 | 332 | 70 | 352 | 1.58e-11 | 66.6 |
MS.gene87496.t1 | AT2G40230 | 23.333 | 360 | 253 | 9 | 48 | 396 | 42 | 389 | 5.04e-11 | 64.7 |
MS.gene87496.t1 | AT4G15390 | 21.928 | 415 | 265 | 16 | 61 | 450 | 64 | 444 | 8.29e-11 | 64.3 |
MS.gene87496.t1 | AT4G15390 | 21.928 | 415 | 265 | 16 | 61 | 450 | 64 | 444 | 8.29e-11 | 64.3 |
Find 96 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTCTTCCTTATGATATTT+TGG | 0.184663 | 4.1:+76081093 | MS.gene87496:CDS |
AAGTTAGAAGAGAATTATTT+TGG | 0.198109 | 4.1:+76080722 | MS.gene87496:CDS |
ATGGTCAATTTGGTTTGTTT+TGG | 0.227446 | 4.1:-76079979 | None:intergenic |
AGGAACTATTGTTGGCTTAT+TGG | 0.232541 | 4.1:-76080381 | None:intergenic |
CATTCTTGTCCTACAATCTA+TGG | 0.234125 | 4.1:-76080693 | None:intergenic |
GGATCTCAAATTTCTCAAAT+TGG | 0.239669 | 4.1:+76079923 | MS.gene87496:CDS |
GGATATGTAATAATGCAAAA+AGG | 0.251454 | 4.1:+76080764 | MS.gene87496:CDS |
TATGGAAAAGAAGACCTCTT+TGG | 0.321294 | 4.1:-76079953 | None:intergenic |
GTTGGACTTCAAAGAAATAT+TGG | 0.326500 | 4.1:+76081019 | MS.gene87496:CDS |
ATGGGACGGTTAACATTGTT+TGG | 0.329441 | 4.1:-76080422 | None:intergenic |
CATCACCATGATTTGTTGCT+TGG | 0.340899 | 4.1:-76079857 | None:intergenic |
TTTGTTTAAGATGGTCAATT+TGG | 0.343039 | 4.1:-76079989 | None:intergenic |
AAATAATTCTCTTCTAACTT+TGG | 0.349532 | 4.1:-76080719 | None:intergenic |
GTGTAGACGGCAAGTCATTT+TGG | 0.349934 | 4.1:+76080321 | MS.gene87496:CDS |
AGGAAACGACCCTATGTCTA+TGG | 0.357040 | 4.1:+76081123 | MS.gene87496:CDS |
ATGGAAAAGAAGACCTCTTT+GGG | 0.360598 | 4.1:-76079952 | None:intergenic |
ACGAATGCAGACCTTTCTTC+TGG | 0.360777 | 4.1:-76080665 | None:intergenic |
GTTGAAAACCCCGTTTATAT+CGG | 0.362533 | 4.1:+76080889 | MS.gene87496:CDS |
TTTGGCATTTCATCAACTCT+TGG | 0.368556 | 4.1:+76080339 | MS.gene87496:CDS |
TTACGGTAATGACTTTGGTT+GGG | 0.373170 | 4.1:+76080970 | MS.gene87496:CDS |
TTGGCATTTCATCAACTCTT+GGG | 0.376104 | 4.1:+76080340 | MS.gene87496:CDS |
AGCCTATTGCAGTTAGAAAT+GGG | 0.388093 | 4.1:+76080996 | MS.gene87496:CDS |
ACCCCATTTCTAACTGCAAT+AGG | 0.394232 | 4.1:-76080998 | None:intergenic |
TCGTCTTACCCATAGATTGT+AGG | 0.400779 | 4.1:+76080684 | MS.gene87496:CDS |
AAGCCTATTGCAGTTAGAAA+TGG | 0.401535 | 4.1:+76080995 | MS.gene87496:CDS |
AACTATTACGGTAATGACTT+TGG | 0.405935 | 4.1:+76080965 | MS.gene87496:CDS |
TTAATCGACGGTATCTTCAT+TGG | 0.408333 | 4.1:+76080278 | MS.gene87496:CDS |
TCGAAAGAAGGAACTATTGT+TGG | 0.415115 | 4.1:-76080389 | None:intergenic |
TCACCACGGTTCAACTATTA+CGG | 0.422782 | 4.1:+76080953 | MS.gene87496:CDS |
CTACCTGGCTCCGATATAAA+CGG | 0.425817 | 4.1:-76080899 | None:intergenic |
TACCTGGCTCCGATATAAAC+GGG | 0.427106 | 4.1:-76080898 | None:intergenic |
GGGAGTGGAATCGGAGCAAC+TGG | 0.428061 | 4.1:+76080743 | MS.gene87496:CDS |
AAATTGTTCATTTATCTCCA+TGG | 0.445544 | 4.1:+76079901 | MS.gene87496:CDS |
ATTACGGTAATGACTTTGGT+TGG | 0.447960 | 4.1:+76080969 | MS.gene87496:CDS |
AGGCAAGTGTTTGTTTAAGA+TGG | 0.458293 | 4.1:-76079998 | None:intergenic |
TACGGTAATGACTTTGGTTG+GGG | 0.461686 | 4.1:+76080971 | MS.gene87496:CDS |
GGAAACCAGCGTTCGAAAGA+AGG | 0.465595 | 4.1:-76080401 | None:intergenic |
TAATGATTGATGTTGAATCT+TGG | 0.469422 | 4.1:+76080867 | MS.gene87496:CDS |
AATTGTTCATTTATCTCCAT+GGG | 0.481963 | 4.1:+76079902 | MS.gene87496:CDS |
AAAGGGGAATTAATGGAAAG+TGG | 0.488381 | 4.1:+76080782 | MS.gene87496:CDS |
ACAATCCAAGCAACAAATCA+TGG | 0.492574 | 4.1:+76079852 | MS.gene87496:CDS |
TAAGAATAATGAAGAAACAA+TGG | 0.493631 | 4.1:-76080192 | None:intergenic |
ATAGCATCCAAAATATCATA+AGG | 0.495132 | 4.1:-76081100 | None:intergenic |
ACAATGGGAGGAACATACTT+TGG | 0.495798 | 4.1:-76080176 | None:intergenic |
AAGAATAATGAAGAAACAAT+GGG | 0.496513 | 4.1:-76080191 | None:intergenic |
TTGAGAAATTTGAGATCCCA+TGG | 0.499411 | 4.1:-76079918 | None:intergenic |
AAACTAGAATCCATAGACAT+AGG | 0.502667 | 4.1:-76081133 | None:intergenic |
GAATTAATGGAAAGTGGGAT+TGG | 0.504651 | 4.1:+76080788 | MS.gene87496:CDS |
ACCAGCGTTGTTACAAATGA+TGG | 0.505482 | 4.1:-76080099 | None:intergenic |
GGTAGAGTTATTGTGCTTGG+TGG | 0.507052 | 4.1:+76081040 | MS.gene87496:CDS |
GAATTTGTTCCTTTGTAAAG+TGG | 0.513443 | 4.1:-76080508 | None:intergenic |
TGGGATTGGTAAAATTGCTA+TGG | 0.515611 | 4.1:+76080802 | MS.gene87496:CDS |
AACTTCTTTCCACTACTCGC+TGG | 0.519870 | 4.1:+76080029 | MS.gene87496:CDS |
TACTTATAATTAAACGCCAA+AGG | 0.529613 | 4.1:-76080628 | None:intergenic |
ATTGGTAGAGTTATTGTGCT+TGG | 0.531528 | 4.1:+76081037 | MS.gene87496:CDS |
AAGGGGAATTAATGGAAAGT+GGG | 0.533012 | 4.1:+76080783 | MS.gene87496:CDS |
ATGGAACATGAGGCGTTGCT+AGG | 0.533394 | 4.1:-76080080 | None:intergenic |
AAAATCTTAAACCAGAAGAA+AGG | 0.538946 | 4.1:+76080654 | MS.gene87496:CDS |
AACTAGAATCCATAGACATA+GGG | 0.544098 | 4.1:-76081132 | None:intergenic |
CATACGGTTTCCTTTCACAA+AGG | 0.546568 | 4.1:+76080442 | MS.gene87496:CDS |
ACCCCGTTTATATCGGAGCC+AGG | 0.547815 | 4.1:+76080896 | MS.gene87496:CDS |
AGATTACTTGATGATCTACC+TGG | 0.550288 | 4.1:-76080914 | None:intergenic |
ATCAAAATCTCATCATGAGA+AGG | 0.558207 | 4.1:+76080844 | MS.gene87496:CDS |
TGGTTGAAGTATGTCGGCAA+TGG | 0.566982 | 4.1:-76080156 | None:intergenic |
ATTGCAGTTAGAAATGGGGT+TGG | 0.568648 | 4.1:+76081001 | MS.gene87496:CDS |
ATACTTTGGTTGAAGTATGT+CGG | 0.572459 | 4.1:-76080162 | None:intergenic |
AAAAGAAGACCTCTTTGGGT+TGG | 0.572933 | 4.1:-76079948 | None:intergenic |
TAGTGGAAAGAAGTTAAGTG+TGG | 0.573405 | 4.1:-76080021 | None:intergenic |
CAAGCAACAAATCATGGTGA+TGG | 0.574475 | 4.1:+76079858 | MS.gene87496:CDS |
GTGCTTGGTGGTGCAGAAGA+AGG | 0.576706 | 4.1:+76081052 | MS.gene87496:CDS |
ATTCTTGTCCTACAATCTAT+GGG | 0.578627 | 4.1:-76080692 | None:intergenic |
CTTTGTGAAAGGAAACCGTA+TGG | 0.579781 | 4.1:-76080441 | None:intergenic |
TAGTTCCTTCTTTCGAACGC+TGG | 0.581888 | 4.1:+76080396 | MS.gene87496:CDS |
ACAATGTTAACCGTCCCATA+CGG | 0.591996 | 4.1:+76080426 | MS.gene87496:CDS |
GTTACTTGTACTGCAAGTAG+TGG | 0.602193 | 4.1:-76080251 | None:intergenic |
ATTAACCATGTGTGTGTAGA+CGG | 0.608212 | 4.1:+76080308 | MS.gene87496:CDS |
GCCTATTGCAGTTAGAAATG+GGG | 0.609427 | 4.1:+76080997 | MS.gene87496:CDS |
ACAAGACGACCAGCGAGTAG+TGG | 0.610703 | 4.1:-76080038 | None:intergenic |
TCGAATCTTCCACTTTACAA+AGG | 0.610715 | 4.1:+76080499 | MS.gene87496:CDS |
TGGAAAGAAGTTAAGTGTGG+AGG | 0.618484 | 4.1:-76080018 | None:intergenic |
TCCATCATTTGTAACAACGC+TGG | 0.618527 | 4.1:+76080098 | MS.gene87496:CDS |
ACAAATCATGGTGATGGTGA+TGG | 0.619825 | 4.1:+76079864 | MS.gene87496:CDS |
TGAAAGGAAACCGTATGGGA+CGG | 0.630636 | 4.1:-76080436 | None:intergenic |
GTTACAAATGATGGAACATG+AGG | 0.636643 | 4.1:-76080090 | None:intergenic |
AATTGCTATGGAAATGAACA+AGG | 0.638167 | 4.1:+76080814 | MS.gene87496:CDS |
AAATTGGCACCAACCCAAAG+AGG | 0.639346 | 4.1:+76079939 | MS.gene87496:CDS |
TTTGTGAAAGGAAACCGTAT+GGG | 0.644706 | 4.1:-76080440 | None:intergenic |
TCTTGGGCTGAAATCTCACA+AGG | 0.661149 | 4.1:+76080356 | MS.gene87496:CDS |
CAAGTAACAGAGTTAATCGA+CGG | 0.676652 | 4.1:+76080266 | MS.gene87496:CDS |
GATAAGTTGAATCTCTGTCA+TGG | 0.679570 | 4.1:-76079820 | None:intergenic |
AATAATGAAGAAACAATGGG+AGG | 0.681867 | 4.1:-76080188 | None:intergenic |
ACTTGCCGTCTACACACACA+TGG | 0.683354 | 4.1:-76080313 | None:intergenic |
TGATAGCAAGCAGTTCACCA+CGG | 0.696229 | 4.1:+76080939 | MS.gene87496:CDS |
AATGATGTGAAAAGCTACGA+AGG | 0.699069 | 4.1:+76080218 | MS.gene87496:CDS |
ACCTGGCTCCGATATAAACG+GGG | 0.710991 | 4.1:-76080897 | None:intergenic |
TTACCGTAATAGTTGAACCG+TGG | 0.734430 | 4.1:-76080956 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTCTCTTCTAACTT+TGG | - | chr4.1:76080722-76080741 | None:intergenic | 20.0% |
!! | AAGAATAATGAAGAAACAAT+GGG | - | chr4.1:76080194-76080213 | None:intergenic | 20.0% |
!! | ATATGTAATAATGCAAAAAG+GGG | + | chr4.1:76080766-76080785 | MS.gene87496:CDS | 20.0% |
!! | GATATGTAATAATGCAAAAA+GGG | + | chr4.1:76080765-76080784 | MS.gene87496:CDS | 20.0% |
!! | TAAGAATAATGAAGAAACAA+TGG | - | chr4.1:76080195-76080214 | None:intergenic | 20.0% |
!!! | AAGTTAGAAGAGAATTATTT+TGG | + | chr4.1:76080722-76080741 | MS.gene87496:CDS | 20.0% |
!!! | AGTTAGAAGAGAATTATTTT+GGG | + | chr4.1:76080723-76080742 | MS.gene87496:CDS | 20.0% |
! | AAAATCTTAAACCAGAAGAA+AGG | + | chr4.1:76080654-76080673 | MS.gene87496:CDS | 25.0% |
! | AAATTGTTCATTTATCTCCA+TGG | + | chr4.1:76079901-76079920 | MS.gene87496:CDS | 25.0% |
! | AATTGTTCATTTATCTCCAT+GGG | + | chr4.1:76079902-76079921 | MS.gene87496:CDS | 25.0% |
! | ATAGCATCCAAAATATCATA+AGG | - | chr4.1:76081103-76081122 | None:intergenic | 25.0% |
! | GGATATGTAATAATGCAAAA+AGG | + | chr4.1:76080764-76080783 | MS.gene87496:CDS | 25.0% |
! | TAATGATTGATGTTGAATCT+TGG | + | chr4.1:76080867-76080886 | MS.gene87496:CDS | 25.0% |
! | TACTTATAATTAAACGCCAA+AGG | - | chr4.1:76080631-76080650 | None:intergenic | 25.0% |
!! | TTGTCTTCCTTATGATATTT+TGG | + | chr4.1:76081093-76081112 | MS.gene87496:CDS | 25.0% |
!! | TTTGTTTAAGATGGTCAATT+TGG | - | chr4.1:76079992-76080011 | None:intergenic | 25.0% |
!!! | TATGATATTTTGGATGCTAT+AGG | + | chr4.1:76081103-76081122 | MS.gene87496:CDS | 25.0% |
AAACTAGAATCCATAGACAT+AGG | - | chr4.1:76081136-76081155 | None:intergenic | 30.0% | |
AACTAGAATCCATAGACATA+GGG | - | chr4.1:76081135-76081154 | None:intergenic | 30.0% | |
AACTATTACGGTAATGACTT+TGG | + | chr4.1:76080965-76080984 | MS.gene87496:CDS | 30.0% | |
AATAATGAAGAAACAATGGG+AGG | - | chr4.1:76080191-76080210 | None:intergenic | 30.0% | |
AATGCAAAAAGGGGAATTAA+TGG | + | chr4.1:76080775-76080794 | MS.gene87496:CDS | 30.0% | |
AATTGCTATGGAAATGAACA+AGG | + | chr4.1:76080814-76080833 | MS.gene87496:CDS | 30.0% | |
ATACTTTGGTTGAAGTATGT+CGG | - | chr4.1:76080165-76080184 | None:intergenic | 30.0% | |
ATCAAAATCTCATCATGAGA+AGG | + | chr4.1:76080844-76080863 | MS.gene87496:CDS | 30.0% | |
ATTCTTGTCCTACAATCTAT+GGG | - | chr4.1:76080695-76080714 | None:intergenic | 30.0% | |
GGATCTCAAATTTCTCAAAT+TGG | + | chr4.1:76079923-76079942 | MS.gene87496:CDS | 30.0% | |
GTTGGACTTCAAAGAAATAT+TGG | + | chr4.1:76081019-76081038 | MS.gene87496:CDS | 30.0% | |
! | GAATTTGTTCCTTTGTAAAG+TGG | - | chr4.1:76080511-76080530 | None:intergenic | 30.0% |
!!! | AATTATTTTGGGAGTGGAAT+CGG | + | chr4.1:76080734-76080753 | MS.gene87496:CDS | 30.0% |
!!! | ATGGTCAATTTGGTTTGTTT+TGG | - | chr4.1:76079982-76080001 | None:intergenic | 30.0% |
!!! | TGGTCAATTTGGTTTGTTTT+GGG | - | chr4.1:76079981-76080000 | None:intergenic | 30.0% |
!!! | TTTGGTTTGTTTTGGGTTTA+TGG | - | chr4.1:76079974-76079993 | None:intergenic | 30.0% |
AAAGGGGAATTAATGGAAAG+TGG | + | chr4.1:76080782-76080801 | MS.gene87496:CDS | 35.0% | |
AAGCCTATTGCAGTTAGAAA+TGG | + | chr4.1:76080995-76081014 | MS.gene87496:CDS | 35.0% | |
AAGGGGAATTAATGGAAAGT+GGG | + | chr4.1:76080783-76080802 | MS.gene87496:CDS | 35.0% | |
AATGATGTGAAAAGCTACGA+AGG | + | chr4.1:76080218-76080237 | MS.gene87496:CDS | 35.0% | |
ACAATCCAAGCAACAAATCA+TGG | + | chr4.1:76079852-76079871 | MS.gene87496:CDS | 35.0% | |
AGCCTATTGCAGTTAGAAAT+GGG | + | chr4.1:76080996-76081015 | MS.gene87496:CDS | 35.0% | |
AGGCAAGTGTTTGTTTAAGA+TGG | - | chr4.1:76080001-76080020 | None:intergenic | 35.0% | |
ATGGAAAAGAAGACCTCTTT+GGG | - | chr4.1:76079955-76079974 | None:intergenic | 35.0% | |
ATTAACCATGTGTGTGTAGA+CGG | + | chr4.1:76080308-76080327 | MS.gene87496:CDS | 35.0% | |
ATTACGGTAATGACTTTGGT+TGG | + | chr4.1:76080969-76080988 | MS.gene87496:CDS | 35.0% | |
ATTGGTAGAGTTATTGTGCT+TGG | + | chr4.1:76081037-76081056 | MS.gene87496:CDS | 35.0% | |
CAAGTAACAGAGTTAATCGA+CGG | + | chr4.1:76080266-76080285 | MS.gene87496:CDS | 35.0% | |
CATTCTTGTCCTACAATCTA+TGG | - | chr4.1:76080696-76080715 | None:intergenic | 35.0% | |
GAATTAATGGAAAGTGGGAT+TGG | + | chr4.1:76080788-76080807 | MS.gene87496:CDS | 35.0% | |
GTTGAAAACCCCGTTTATAT+CGG | + | chr4.1:76080889-76080908 | MS.gene87496:CDS | 35.0% | |
TAGTGGAAAGAAGTTAAGTG+TGG | - | chr4.1:76080024-76080043 | None:intergenic | 35.0% | |
TATGGAAAAGAAGACCTCTT+TGG | - | chr4.1:76079956-76079975 | None:intergenic | 35.0% | |
TCGAAAGAAGGAACTATTGT+TGG | - | chr4.1:76080392-76080411 | None:intergenic | 35.0% | |
TCGAATCTTCCACTTTACAA+AGG | + | chr4.1:76080499-76080518 | MS.gene87496:CDS | 35.0% | |
TTAATCGACGGTATCTTCAT+TGG | + | chr4.1:76080278-76080297 | MS.gene87496:CDS | 35.0% | |
TTACGGTAATGACTTTGGTT+GGG | + | chr4.1:76080970-76080989 | MS.gene87496:CDS | 35.0% | |
TTGGCATTTCATCAACTCTT+GGG | + | chr4.1:76080340-76080359 | MS.gene87496:CDS | 35.0% | |
TTTGGCATTTCATCAACTCT+TGG | + | chr4.1:76080339-76080358 | MS.gene87496:CDS | 35.0% | |
TTTGTGAAAGGAAACCGTAT+GGG | - | chr4.1:76080443-76080462 | None:intergenic | 35.0% | |
! | AGATTACTTGATGATCTACC+TGG | - | chr4.1:76080917-76080936 | None:intergenic | 35.0% |
! | GTTACAAATGATGGAACATG+AGG | - | chr4.1:76080093-76080112 | None:intergenic | 35.0% |
! | TGGGATTGGTAAAATTGCTA+TGG | + | chr4.1:76080802-76080821 | MS.gene87496:CDS | 35.0% |
! | TTGAGAAATTTGAGATCCCA+TGG | - | chr4.1:76079921-76079940 | None:intergenic | 35.0% |
! | TTTTGCACATCCTTTGTGAA+AGG | - | chr4.1:76080455-76080474 | None:intergenic | 35.0% |
!! | AGGAACTATTGTTGGCTTAT+TGG | - | chr4.1:76080384-76080403 | None:intergenic | 35.0% |
!!! | GAAGAGAATTATTTTGGGAG+TGG | + | chr4.1:76080728-76080747 | MS.gene87496:CDS | 35.0% |
AAAAGAAGACCTCTTTGGGT+TGG | - | chr4.1:76079951-76079970 | None:intergenic | 40.0% | |
ACAATGGGAGGAACATACTT+TGG | - | chr4.1:76080179-76080198 | None:intergenic | 40.0% | |
ACAATGTTAACCGTCCCATA+CGG | + | chr4.1:76080426-76080445 | MS.gene87496:CDS | 40.0% | |
ACCAGCGTTGTTACAAATGA+TGG | - | chr4.1:76080102-76080121 | None:intergenic | 40.0% | |
ACCCCATTTCTAACTGCAAT+AGG | - | chr4.1:76081001-76081020 | None:intergenic | 40.0% | |
ATGGGACGGTTAACATTGTT+TGG | - | chr4.1:76080425-76080444 | None:intergenic | 40.0% | |
ATTGCAGTTAGAAATGGGGT+TGG | + | chr4.1:76081001-76081020 | MS.gene87496:CDS | 40.0% | |
CAAGCAACAAATCATGGTGA+TGG | + | chr4.1:76079858-76079877 | MS.gene87496:CDS | 40.0% | |
CATACGGTTTCCTTTCACAA+AGG | + | chr4.1:76080442-76080461 | MS.gene87496:CDS | 40.0% | |
CTTTGTGAAAGGAAACCGTA+TGG | - | chr4.1:76080444-76080463 | None:intergenic | 40.0% | |
GCCTATTGCAGTTAGAAATG+GGG | + | chr4.1:76080997-76081016 | MS.gene87496:CDS | 40.0% | |
GTTACTTGTACTGCAAGTAG+TGG | - | chr4.1:76080254-76080273 | None:intergenic | 40.0% | |
TACGGTAATGACTTTGGTTG+GGG | + | chr4.1:76080971-76080990 | MS.gene87496:CDS | 40.0% | |
TCACCACGGTTCAACTATTA+CGG | + | chr4.1:76080953-76080972 | MS.gene87496:CDS | 40.0% | |
TCCATCATTTGTAACAACGC+TGG | + | chr4.1:76080098-76080117 | MS.gene87496:CDS | 40.0% | |
TCGTCTTACCCATAGATTGT+AGG | + | chr4.1:76080684-76080703 | MS.gene87496:CDS | 40.0% | |
TGGAAAGAAGTTAAGTGTGG+AGG | - | chr4.1:76080021-76080040 | None:intergenic | 40.0% | |
TTACCGTAATAGTTGAACCG+TGG | - | chr4.1:76080959-76080978 | None:intergenic | 40.0% | |
!! | AAGCGCTTTTAAGTCACCTT+TGG | + | chr4.1:76080612-76080631 | MS.gene87496:CDS | 40.0% |
!! | AATGGTAGTGTTTTCTGCTG+TGG | - | chr4.1:76080141-76080160 | None:intergenic | 40.0% |
!! | ACAAATCATGGTGATGGTGA+TGG | + | chr4.1:76079864-76079883 | MS.gene87496:CDS | 40.0% |
!! | CATCACCATGATTTGTTGCT+TGG | - | chr4.1:76079860-76079879 | None:intergenic | 40.0% |
AAATTGGCACCAACCCAAAG+AGG | + | chr4.1:76079939-76079958 | MS.gene87496:CDS | 45.0% | |
AACTTCTTTCCACTACTCGC+TGG | + | chr4.1:76080029-76080048 | MS.gene87496:CDS | 45.0% | |
ACGAATGCAGACCTTTCTTC+TGG | - | chr4.1:76080668-76080687 | None:intergenic | 45.0% | |
AGGAAACGACCCTATGTCTA+TGG | + | chr4.1:76081123-76081142 | MS.gene87496:CDS | 45.0% | |
CTACCTGGCTCCGATATAAA+CGG | - | chr4.1:76080902-76080921 | None:intergenic | 45.0% | |
GGTAGAGTTATTGTGCTTGG+TGG | + | chr4.1:76081040-76081059 | MS.gene87496:CDS | 45.0% | |
TACCTGGCTCCGATATAAAC+GGG | - | chr4.1:76080901-76080920 | None:intergenic | 45.0% | |
TAGTTCCTTCTTTCGAACGC+TGG | + | chr4.1:76080396-76080415 | MS.gene87496:CDS | 45.0% | |
TCTTGGGCTGAAATCTCACA+AGG | + | chr4.1:76080356-76080375 | MS.gene87496:CDS | 45.0% | |
TGAAAGGAAACCGTATGGGA+CGG | - | chr4.1:76080439-76080458 | None:intergenic | 45.0% | |
TGATAGCAAGCAGTTCACCA+CGG | + | chr4.1:76080939-76080958 | MS.gene87496:CDS | 45.0% | |
TGGTTGAAGTATGTCGGCAA+TGG | - | chr4.1:76080159-76080178 | None:intergenic | 45.0% | |
! | GTGTAGACGGCAAGTCATTT+TGG | + | chr4.1:76080321-76080340 | MS.gene87496:CDS | 45.0% |
ACCTGGCTCCGATATAAACG+GGG | - | chr4.1:76080900-76080919 | None:intergenic | 50.0% | |
ACTTGCCGTCTACACACACA+TGG | - | chr4.1:76080316-76080335 | None:intergenic | 50.0% | |
GGAAACCAGCGTTCGAAAGA+AGG | - | chr4.1:76080404-76080423 | None:intergenic | 50.0% | |
! | TAGTGTTTTCTGCTGTGGCG+TGG | - | chr4.1:76080136-76080155 | None:intergenic | 50.0% |
!! | ATGGAACATGAGGCGTTGCT+AGG | - | chr4.1:76080083-76080102 | None:intergenic | 50.0% |
ACAAGACGACCAGCGAGTAG+TGG | - | chr4.1:76080041-76080060 | None:intergenic | 55.0% | |
ACCCCGTTTATATCGGAGCC+AGG | + | chr4.1:76080896-76080915 | MS.gene87496:CDS | 55.0% | |
!! | GTGCTTGGTGGTGCAGAAGA+AGG | + | chr4.1:76081052-76081071 | MS.gene87496:CDS | 55.0% |
GGGAGTGGAATCGGAGCAAC+TGG | + | chr4.1:76080743-76080762 | MS.gene87496:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 76079822 | 76081186 | 76079822 | ID=MS.gene87496 |
chr4.1 | mRNA | 76079822 | 76081186 | 76079822 | ID=MS.gene87496.t1;Parent=MS.gene87496 |
chr4.1 | exon | 76079822 | 76081186 | 76079822 | ID=MS.gene87496.t1.exon1;Parent=MS.gene87496.t1 |
chr4.1 | CDS | 76079822 | 76081186 | 76079822 | ID=cds.MS.gene87496.t1;Parent=MS.gene87496.t1 |
Gene Sequence |
Protein sequence |