Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47396.t1 | XP_003590437.1 | 79.2 | 500 | 5 | 1 | 1 | 401 | 87 | 586 | 1.50E-208 | 735.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47396.t1 | Q9LZD0 | 60.6 | 485 | 91 | 2 | 13 | 397 | 115 | 599 | 8.6e-157 | 554.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47396.t1 | G7IA71 | 79.2 | 500 | 5 | 1 | 1 | 401 | 87 | 586 | 1.1e-208 | 735.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene47396 | 0.805734 | 1.16E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene47396 | 0.821008 | 5.07E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene47396 | 0.822117 | 2.81E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene47396 | 0.857624 | 1.44E-62 | -1.69E-46 |
| MS.gene049369 | MS.gene47396 | 0.858059 | 1.07E-62 | -1.69E-46 |
| MS.gene049427 | MS.gene47396 | 0.804971 | 1.67E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene47396 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene47396 | 0.830075 | 3.60E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene47396 | 0.823253 | 1.53E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene47396 | 0.818494 | 1.90E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene47396 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene049907 | MS.gene47396 | 0.800324 | 1.52E-48 | -1.69E-46 |
| MS.gene050122 | MS.gene47396 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene47396 | 0.809766 | 1.61E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene47396 | 0.862503 | 4.84E-64 | -1.69E-46 |
| MS.gene050397 | MS.gene47396 | 0.832995 | 6.88E-56 | -1.69E-46 |
| MS.gene050400 | MS.gene47396 | 0.833727 | 4.52E-56 | -1.69E-46 |
| MS.gene050406 | MS.gene47396 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene47396 | -0.801053 | 1.08E-48 | -1.69E-46 |
| MS.gene050464 | MS.gene47396 | 0.825086 | 5.68E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene47396 | 0.815992 | 6.96E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene47396 | 0.834703 | 2.57E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene47396 | 0.904168 | 1.63E-79 | -1.69E-46 |
| MS.gene050812 | MS.gene47396 | 0.808339 | 3.25E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene47396 | 0.836762 | 7.74E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene47396 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene47396 | 0.896193 | 4.67E-76 | -1.69E-46 |
| MS.gene051360 | MS.gene47396 | 0.838884 | 2.21E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene47396 | 0.843908 | 1.05E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene47396 | 0.855186 | 7.47E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene47396 | 0.834184 | 3.47E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene47396 | 0.816983 | 4.17E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene47396 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene47396 | 0.843098 | 1.73E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene47396 | 0.827013 | 1.98E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene47396 | 0.815584 | 8.58E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene47396 | -0.845413 | 4.13E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene47396 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene47396 | 0.807904 | 4.02E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene47396 | 0.882395 | 1.08E-70 | -1.69E-46 |
| MS.gene052253 | MS.gene47396 | 0.880149 | 6.96E-70 | -1.69E-46 |
| MS.gene052310 | MS.gene47396 | 0.864693 | 1.01E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene47396 | 0.817139 | 3.85E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene47396 | 0.854717 | 1.02E-61 | -1.69E-46 |
| MS.gene052346 | MS.gene47396 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene47396 | 0.843781 | 1.13E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene47396 | 0.878774 | 2.14E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene47396 | 0.842547 | 2.42E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene47396 | 0.827793 | 1.29E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene47396 | 0.893561 | 5.60E-75 | -1.69E-46 |
| MS.gene052501 | MS.gene47396 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene47396 | 0.817805 | 2.73E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene47396 | 0.815719 | 8.00E-52 | -1.69E-46 |
| MS.gene052999 | MS.gene47396 | 0.807151 | 5.81E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene47396 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene47396 | 0.826481 | 2.65E-54 | -1.69E-46 |
| MS.gene05316 | MS.gene47396 | 0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene47396 | 0.828751 | 7.55E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene47396 | 0.855002 | 8.45E-62 | -1.69E-46 |
| MS.gene053557 | MS.gene47396 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene47396 | 0.834155 | 3.53E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene47396 | 0.860891 | 1.51E-63 | -1.69E-46 |
| MS.gene053836 | MS.gene47396 | 0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene053873 | MS.gene47396 | 0.808765 | 2.64E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene47396 | 0.808924 | 2.44E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene47396 | 0.830116 | 3.52E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene47396 | 0.845599 | 3.67E-59 | -1.69E-46 |
| MS.gene054011 | MS.gene47396 | 0.849055 | 4.13E-60 | -1.69E-46 |
| MS.gene054012 | MS.gene47396 | 0.843497 | 1.35E-58 | -1.69E-46 |
| MS.gene054013 | MS.gene47396 | 0.843023 | 1.81E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene47396 | 0.855657 | 5.44E-62 | -1.69E-46 |
| MS.gene054183 | MS.gene47396 | 0.833464 | 5.25E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene47396 | 0.859799 | 3.22E-63 | -1.69E-46 |
| MS.gene054556 | MS.gene47396 | 0.83866 | 2.52E-57 | -1.69E-46 |
| MS.gene054955 | MS.gene47396 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene47396 | 0.854966 | 8.65E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene47396 | 0.899627 | 1.64E-77 | -1.69E-46 |
| MS.gene055277 | MS.gene47396 | 0.821639 | 3.63E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene47396 | 0.827705 | 1.35E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene47396 | 0.816171 | 6.34E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene47396 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene47396 | 0.834734 | 2.53E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene47396 | 0.835632 | 1.50E-56 | -1.69E-46 |
| MS.gene055666 | MS.gene47396 | 0.800501 | 1.40E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene47396 | 0.827623 | 1.41E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene47396 | 0.834448 | 2.98E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene47396 | 0.846355 | 2.29E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene47396 | 0.854284 | 1.36E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene47396 | 0.813987 | 1.94E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene47396 | 0.815494 | 8.99E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene47396 | 0.886727 | 2.66E-72 | -1.69E-46 |
| MS.gene056407 | MS.gene47396 | 0.870709 | 1.19E-66 | -1.69E-46 |
| MS.gene056410 | MS.gene47396 | 0.848501 | 5.89E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene47396 | 0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene47396 | 0.865515 | 5.59E-65 | -1.69E-46 |
| MS.gene056514 | MS.gene47396 | 0.828435 | 9.01E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene47396 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene47396 | 0.824781 | 6.70E-54 | -1.69E-46 |
| MS.gene05666 | MS.gene47396 | 0.804471 | 2.13E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene47396 | 0.816887 | 4.39E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene47396 | 0.833862 | 4.18E-56 | -1.69E-46 |
| MS.gene057019 | MS.gene47396 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene47396 | 0.840249 | 9.74E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene47396 | 0.802946 | 4.41E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene47396 | 0.818393 | 2.01E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene47396 | 0.828267 | 9.88E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene47396 | 0.82622 | 3.06E-54 | -1.69E-46 |
| MS.gene057330 | MS.gene47396 | 0.824984 | 6.00E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene47396 | 0.842503 | 2.49E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene47396 | 0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene47396 | 0.837122 | 6.26E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene47396 | 0.824321 | 8.60E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene47396 | 0.836208 | 1.07E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene47396 | 0.803732 | 3.03E-49 | -1.69E-46 |
| MS.gene057476 | MS.gene47396 | 0.840702 | 7.42E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene47396 | 0.813912 | 2.01E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene47396 | 0.879666 | 1.03E-69 | -1.69E-46 |
| MS.gene057823 | MS.gene47396 | 0.89012 | 1.31E-73 | -1.69E-46 |
| MS.gene057825 | MS.gene47396 | 0.817622 | 3.00E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene47396 | 0.80421 | 2.41E-49 | -1.69E-46 |
| MS.gene057888 | MS.gene47396 | 0.811663 | 6.25E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene47396 | 0.804519 | 2.08E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene47396 | 0.844311 | 8.18E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene47396 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene47396 | 0.881011 | 3.42E-70 | -1.69E-46 |
| MS.gene058019 | MS.gene47396 | 0.835873 | 1.30E-56 | -1.69E-46 |
| MS.gene058075 | MS.gene47396 | 0.818924 | 1.52E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene47396 | 0.845182 | 4.76E-59 | -1.69E-46 |
| MS.gene058233 | MS.gene47396 | 0.811281 | 7.57E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene47396 | 0.839959 | 1.16E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene47396 | 0.826822 | 2.20E-54 | -1.69E-46 |
| MS.gene058376 | MS.gene47396 | 0.831743 | 1.40E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene47396 | 0.816906 | 4.34E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene47396 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene47396 | 0.864519 | 1.15E-64 | -1.69E-46 |
| MS.gene058700 | MS.gene47396 | 0.86227 | 5.71E-64 | -1.69E-46 |
| MS.gene058787 | MS.gene47396 | 0.822117 | 2.81E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene47396 | 0.812291 | 4.56E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene47396 | 0.852514 | 4.39E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene47396 | 0.822998 | 1.75E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene47396 | 0.832437 | 9.46E-56 | -1.69E-46 |
| MS.gene058995 | MS.gene47396 | 0.879299 | 1.40E-69 | -1.69E-46 |
| MS.gene059011 | MS.gene47396 | 0.846871 | 1.65E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene47396 | 0.896534 | 3.37E-76 | -1.69E-46 |
| MS.gene059080 | MS.gene47396 | 0.830533 | 2.78E-55 | -1.69E-46 |
| MS.gene059082 | MS.gene47396 | 0.860305 | 2.27E-63 | -1.69E-46 |
| MS.gene059141 | MS.gene47396 | 0.823045 | 1.71E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene47396 | 0.803972 | 2.70E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene47396 | 0.853134 | 2.92E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene47396 | 0.806741 | 7.10E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene47396 | 0.85644 | 3.21E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene47396 | 0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene47396 | 0.878463 | 2.75E-69 | -1.69E-46 |
| MS.gene059455 | MS.gene47396 | 0.829654 | 4.56E-55 | -1.69E-46 |
| MS.gene059462 | MS.gene47396 | 0.856808 | 2.50E-62 | -1.69E-46 |
| MS.gene059536 | MS.gene47396 | 0.823818 | 1.13E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene47396 | 0.851883 | 6.64E-61 | -1.69E-46 |
| MS.gene059674 | MS.gene47396 | 0.858766 | 6.57E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene47396 | 0.862891 | 3.67E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene47396 | 0.90461 | 1.03E-79 | -1.69E-46 |
| MS.gene059692 | MS.gene47396 | 0.895012 | 1.44E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene47396 | 0.901285 | 3.13E-78 | -1.69E-46 |
| MS.gene059711 | MS.gene47396 | 0.826395 | 2.78E-54 | -1.69E-46 |
| MS.gene059807 | MS.gene47396 | 0.881281 | 2.73E-70 | -1.69E-46 |
| MS.gene05984 | MS.gene47396 | 0.830206 | 3.35E-55 | -1.69E-46 |
| MS.gene059876 | MS.gene47396 | 0.849134 | 3.93E-60 | -1.69E-46 |
| MS.gene059933 | MS.gene47396 | 0.826461 | 2.68E-54 | -1.69E-46 |
| MS.gene060247 | MS.gene47396 | 0.819879 | 9.21E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene47396 | 0.823639 | 1.24E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene47396 | 0.840008 | 1.13E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene47396 | 0.876493 | 1.34E-68 | -1.69E-46 |
| MS.gene060495 | MS.gene47396 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene47396 | 0.84147 | 4.66E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene47396 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene47396 | 0.870071 | 1.92E-66 | -1.69E-46 |
| MS.gene060986 | MS.gene47396 | 0.828268 | 9.88E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene47396 | 0.827243 | 1.74E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene47396 | 0.877033 | 8.69E-69 | -1.69E-46 |
| MS.gene061051 | MS.gene47396 | -0.839366 | 1.65E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene47396 | 0.864025 | 1.64E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene47396 | 0.81359 | 2.37E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47396.t1 | MTR_1g062130 | 98.929 | 280 | 3 | 0 | 122 | 401 | 307 | 586 | 0.0 | 543 |
| MS.gene47396.t1 | MTR_1g062130 | 98.347 | 121 | 2 | 0 | 1 | 121 | 87 | 207 | 6.14e-76 | 246 |
| MS.gene47396.t1 | MTR_7g102810 | 79.310 | 261 | 54 | 0 | 126 | 386 | 290 | 550 | 7.83e-136 | 400 |
| MS.gene47396.t1 | MTR_7g102810 | 83.471 | 121 | 18 | 1 | 3 | 121 | 67 | 187 | 1.66e-63 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47396.t1 | AT5G03555 | 72.662 | 278 | 74 | 1 | 122 | 397 | 322 | 599 | 1.01e-124 | 373 |
| MS.gene47396.t1 | AT5G03555 | 81.579 | 114 | 21 | 0 | 8 | 121 | 110 | 223 | 4.53e-55 | 191 |
Find 78 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAAGTTATTGGTCAAAT+TGG | 0.137573 | 1.4:+51179969 | MS.gene47396:CDS |
| TCAAATCCAATTCAACTTCT+TGG | 0.231470 | 1.4:+51180074 | MS.gene47396:CDS |
| TTGTTAATCTTAACCCTTCA+TGG | 0.232561 | 1.4:+51180201 | MS.gene47396:CDS |
| ATTCAACTTCTTGGTAGAAT+TGG | 0.298807 | 1.4:+51180083 | MS.gene47396:CDS |
| AGTTGGTTATTCTGCATTGA+TGG | 0.299487 | 1.4:+51180325 | MS.gene47396:CDS |
| GGCCATGCAGGTACAAAATA+TGG | 0.311772 | 1.4:+51179441 | MS.gene47396:CDS |
| ATGGGGCTATTTACATTTGT+TGG | 0.314121 | 1.4:+51180005 | MS.gene47396:CDS |
| GCTGGCTCTTTAGTTGATCT+TGG | 0.318324 | 1.4:+51179345 | MS.gene47396:CDS |
| GTCTTGAAATAGCTTCTCTT+TGG | 0.325425 | 1.4:+51179286 | MS.gene47396:CDS |
| TTGTTCCCACTTATTCTAAC+TGG | 0.334061 | 1.4:+51179420 | MS.gene47396:CDS |
| ATTCTACCAAGAAGTTGAAT+TGG | 0.341747 | 1.4:-51180080 | None:intergenic |
| TTATACACAAGGAGTCCTTT+AGG | 0.343411 | 1.4:+51180416 | MS.gene47396:CDS |
| GTTCTTGCTAGATCCTCTTT+TGG | 0.345707 | 1.4:+51179477 | MS.gene47396:CDS |
| TCCAATTGGAGGGATTGTTC+TGG | 0.353528 | 1.4:+51180349 | MS.gene47396:CDS |
| CTTTACACTTACTTTGCATC+TGG | 0.362454 | 1.4:-51180680 | None:intergenic |
| TTTGTTTATACTTGGTTAGT+TGG | 0.363050 | 1.4:+51180308 | MS.gene47396:CDS |
| ATCAAGTTATTGGTCAAATT+GGG | 0.372797 | 1.4:+51179970 | MS.gene47396:CDS |
| CTAAGAGCTTTAGTTGGTTG+TGG | 0.384678 | 1.4:+51179528 | MS.gene47396:CDS |
| GCAATTGTGGCTTTAATTGT+TGG | 0.391515 | 1.4:+51180473 | MS.gene47396:CDS |
| AAAGAGGATCTAGCAAGAAC+TGG | 0.394049 | 1.4:-51179474 | None:intergenic |
| CTTACTTTGCATCTGGCAAA+AGG | 0.404913 | 1.4:-51180673 | None:intergenic |
| TAGGTGCATACTATTATTCA+AGG | 0.412287 | 1.4:+51180435 | MS.gene47396:CDS |
| GAATTGTGTTTCAACCTTGG+AGG | 0.413270 | 1.4:+51180264 | MS.gene47396:CDS |
| CTTTGGATAGGACTAGTTGT+TGG | 0.416651 | 1.4:+51179303 | MS.gene47396:CDS |
| TATACCACAACAAAAGCATT+AGG | 0.418760 | 1.4:-51180551 | None:intergenic |
| GTTCTTTGAGAAGGTGTAGT+TGG | 0.420268 | 1.4:-51179255 | None:intergenic |
| AGATTAACAAGAGCATTTGC+AGG | 0.421285 | 1.4:-51180188 | None:intergenic |
| CAACTTCTTGGTAGAATTGG+TGG | 0.437438 | 1.4:+51180086 | MS.gene47396:CDS |
| TTTGCATATCTAGTAAAATC+AGG | 0.438764 | 1.4:-51179936 | None:intergenic |
| TCTGCATTGATGGGTCCAAT+TGG | 0.438956 | 1.4:+51180335 | MS.gene47396:CDS |
| TGCAAGAAACCAGGAACAAC+AGG | 0.440200 | 1.4:-51180503 | None:intergenic |
| CCTGGTTTCTTGCAGAAAGT+TGG | 0.442097 | 1.4:+51180512 | MS.gene47396:CDS |
| ACCAGAACAATCCCTCCAAT+TGG | 0.442179 | 1.4:-51180350 | None:intergenic |
| ACTAGTGTACTTGCAATTGT+TGG | 0.451766 | 1.4:+51180116 | MS.gene47396:CDS |
| GTTGGTTATTCTGCATTGAT+GGG | 0.456877 | 1.4:+51180326 | MS.gene47396:CDS |
| TTACTTTGCATCTGGCAAAA+GGG | 0.462470 | 1.4:-51180672 | None:intergenic |
| GCATGGCCAGTTAGAATAAG+TGG | 0.465519 | 1.4:-51179426 | None:intergenic |
| TTGGAATTGTGTTTCAACCT+TGG | 0.470471 | 1.4:+51180261 | MS.gene47396:CDS |
| GAAATAGCTTCTCTTTGGAT+AGG | 0.474401 | 1.4:+51179291 | MS.gene47396:CDS |
| GTCCCATCTTACTATCTAGC+TGG | 0.476488 | 1.4:+51179327 | MS.gene47396:CDS |
| ACTAAAGCTCTTAGAAGAGT+TGG | 0.478864 | 1.4:-51179519 | None:intergenic |
| GAGCTTTAGTTGGTTGTGGT+TGG | 0.482936 | 1.4:+51179532 | MS.gene47396:CDS |
| ACTCTTCTAAGAGCTTTAGT+TGG | 0.487346 | 1.4:+51179522 | MS.gene47396:CDS |
| AATTGGAGGGATTGTTCTGG+TGG | 0.488911 | 1.4:+51180352 | MS.gene47396:CDS |
| AGATCTTCATTTGTGAGTGA+TGG | 0.490869 | 1.4:-51179228 | None:intergenic |
| CTTCTAAAAGTGAACCATGA+AGG | 0.491336 | 1.4:-51180215 | None:intergenic |
| CCTTCTCAAAGAACATTCTC+AGG | 0.496528 | 1.4:+51179264 | MS.gene47396:CDS |
| CTTATTCTAACTGGCCATGC+AGG | 0.503591 | 1.4:+51179429 | MS.gene47396:CDS |
| GAGCCAGCTAGATAGTAAGA+TGG | 0.523192 | 1.4:-51179330 | None:intergenic |
| CCTGAGAATGTTCTTTGAGA+AGG | 0.524757 | 1.4:-51179264 | None:intergenic |
| GCATTGATGGGTCCAATTGG+AGG | 0.526853 | 1.4:+51180338 | MS.gene47396:CDS |
| GTTTAATGTAGCAGCAATTG+TGG | 0.530754 | 1.4:+51180460 | MS.gene47396:CDS |
| TTCTAAAAGTGAACCATGAA+GGG | 0.532308 | 1.4:-51180214 | None:intergenic |
| AGCACCATGAATACCAAAAG+AGG | 0.532509 | 1.4:-51179490 | None:intergenic |
| AGCCAGCTAGATAGTAAGAT+GGG | 0.535748 | 1.4:-51179329 | None:intergenic |
| TAGTTGATCTTGGTATGTCA+TGG | 0.536269 | 1.4:+51179355 | MS.gene47396:CDS |
| TACTTTGCATCTGGCAAAAG+GGG | 0.536751 | 1.4:-51180671 | None:intergenic |
| GAATAATAGTATGCACCTAA+AGG | 0.539288 | 1.4:-51180431 | None:intergenic |
| CATTGATGGGTCCAATTGGA+GGG | 0.542846 | 1.4:+51180339 | MS.gene47396:CDS |
| TGGGAACAAAAGAATGATGT+TGG | 0.543319 | 1.4:-51179406 | None:intergenic |
| CTAGACTTCAAAAGCCTCCA+AGG | 0.543594 | 1.4:-51180278 | None:intergenic |
| CCAACTTTCTGCAAGAAACC+AGG | 0.550055 | 1.4:-51180512 | None:intergenic |
| CTTATATTAGCAGTAAGTGA+AGG | 0.553480 | 1.4:-51179885 | None:intergenic |
| TTGTGGTATACAACAATGCT+TGG | 0.556362 | 1.4:+51180564 | MS.gene47396:CDS |
| TTAAGTTTGAGAAGGAAGCC+AGG | 0.562510 | 1.4:+51180629 | MS.gene47396:CDS |
| AGGTGCATACTATTATTCAA+GGG | 0.584437 | 1.4:+51180436 | MS.gene47396:CDS |
| AAGAGGATCTAGCAAGAACT+GGG | 0.585838 | 1.4:-51179473 | None:intergenic |
| TTATATTAGCAGTAAGTGAA+GGG | 0.605022 | 1.4:-51179884 | None:intergenic |
| TCTATTACAGCAGATTCACC+TGG | 0.613794 | 1.4:-51180647 | None:intergenic |
| TCATTTGTGAGTGATGGATG+AGG | 0.614098 | 1.4:-51179222 | None:intergenic |
| CTTGGTATGTCATGGTGGCA+AGG | 0.620078 | 1.4:+51179363 | MS.gene47396:CDS |
| GGTGCATACTATTATTCAAG+GGG | 0.621579 | 1.4:+51180437 | MS.gene47396:CDS |
| CATGGCCAGTTAGAATAAGT+GGG | 0.643768 | 1.4:-51179425 | None:intergenic |
| ACTTTGCATCTGGCAAAAGG+GGG | 0.662456 | 1.4:-51180670 | None:intergenic |
| GTGCATACTATTATTCAAGG+GGG | 0.687561 | 1.4:+51180438 | MS.gene47396:CDS |
| TTGATCTTGGTATGTCATGG+TGG | 0.690889 | 1.4:+51179358 | MS.gene47396:CDS |
| GGGTAAGTGATTTATACACA+AGG | 0.702035 | 1.4:+51180405 | MS.gene47396:CDS |
| GATGTTGGCAAGAACAACTG+TGG | 0.755238 | 1.4:-51179391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAACATGAAAATTCAAG+TGG | - | chr1.4:51179666-51179685 | None:intergenic | 20.0% |
| !! | GAAGTAAGAAAAATAAGTAT+CGG | - | chr1.4:51179765-51179784 | None:intergenic | 20.0% |
| !!! | ACATTTTTTCTTTATCTTCT+AGG | + | chr1.4:51179829-51179848 | MS.gene47396:intron | 20.0% |
| !!! | ACTTGAATTTTCATGTTTTA+TGG | + | chr1.4:51179665-51179684 | MS.gene47396:intron | 20.0% |
| !!! | TCAAATTCATAGTTTTTGAA+TGG | - | chr1.4:51179201-51179220 | None:intergenic | 20.0% |
| !!! | TTACTGCTAATATAAGTTTT+TGG | + | chr1.4:51179892-51179911 | MS.gene47396:CDS | 20.0% |
| !!! | TTCATGTTTTATGGTATTTT+GGG | + | chr1.4:51179674-51179693 | MS.gene47396:intron | 20.0% |
| !!! | TTTCATGTTTTATGGTATTT+TGG | + | chr1.4:51179673-51179692 | MS.gene47396:intron | 20.0% |
| ! | AGTCAAAAAGATCAAGTTAT+TGG | + | chr1.4:51179960-51179979 | MS.gene47396:CDS | 25.0% |
| ! | ATCAAGTTATTGGTCAAATT+GGG | + | chr1.4:51179970-51179989 | MS.gene47396:CDS | 25.0% |
| ! | TGTACAAAAAATGAAGTTGA+GGG | + | chr1.4:51180385-51180404 | MS.gene47396:CDS | 25.0% |
| ! | TTATATTAGCAGTAAGTGAA+GGG | - | chr1.4:51179887-51179906 | None:intergenic | 25.0% |
| ! | TTGTACAAAAAATGAAGTTG+AGG | + | chr1.4:51180384-51180403 | MS.gene47396:CDS | 25.0% |
| ! | TTTGCATATCTAGTAAAATC+AGG | - | chr1.4:51179939-51179958 | None:intergenic | 25.0% |
| ! | TTTGTTTATACTTGGTTAGT+TGG | + | chr1.4:51180308-51180327 | MS.gene47396:CDS | 25.0% |
| !! | GGATTTTATTAAGTTTGAGA+AGG | + | chr1.4:51180621-51180640 | MS.gene47396:CDS | 25.0% |
| !! | GTAATTTCTTTTAGTGAGTT+TGG | - | chr1.4:51179606-51179625 | None:intergenic | 25.0% |
| !! | TCATCTACAAAAGTGATTTT+TGG | + | chr1.4:51180041-51180060 | MS.gene47396:CDS | 25.0% |
| !! | TTTTGTCAAATTATCTACCT+TGG | + | chr1.4:51179628-51179647 | MS.gene47396:intron | 25.0% |
| !!! | AATTGGGTTACCTATTTTTA+TGG | + | chr1.4:51179986-51180005 | MS.gene47396:CDS | 25.0% |
| !!! | ATTGGGTTACCTATTTTTAT+GGG | + | chr1.4:51179987-51180006 | MS.gene47396:CDS | 25.0% |
| !!! | TTATTAGTTTCTTTTCAGCA+GGG | + | chr1.4:51180588-51180607 | MS.gene47396:CDS | 25.0% |
| !!! | TTTATTAGTTTCTTTTCAGC+AGG | + | chr1.4:51180587-51180606 | MS.gene47396:CDS | 25.0% |
| AGGTGCATACTATTATTCAA+GGG | + | chr1.4:51180436-51180455 | MS.gene47396:CDS | 30.0% | |
| ATTCAACTTCTTGGTAGAAT+TGG | + | chr1.4:51180083-51180102 | MS.gene47396:CDS | 30.0% | |
| ATTCTACCAAGAAGTTGAAT+TGG | - | chr1.4:51180083-51180102 | None:intergenic | 30.0% | |
| CTTATATTAGCAGTAAGTGA+AGG | - | chr1.4:51179888-51179907 | None:intergenic | 30.0% | |
| GAATAATAGTATGCACCTAA+AGG | - | chr1.4:51180434-51180453 | None:intergenic | 30.0% | |
| GATCAAGTTATTGGTCAAAT+TGG | + | chr1.4:51179969-51179988 | MS.gene47396:CDS | 30.0% | |
| GTAAATAGCCCCATAAAAAT+AGG | - | chr1.4:51179999-51180018 | None:intergenic | 30.0% | |
| TAGGTGCATACTATTATTCA+AGG | + | chr1.4:51180435-51180454 | MS.gene47396:CDS | 30.0% | |
| TATGGAATTGAATCATGGAT+TGG | + | chr1.4:51179555-51179574 | MS.gene47396:intron | 30.0% | |
| TCAAATCCAATTCAACTTCT+TGG | + | chr1.4:51180074-51180093 | MS.gene47396:CDS | 30.0% | |
| TTACTTCATGTCTTCTTGTT+TGG | + | chr1.4:51179778-51179797 | MS.gene47396:intron | 30.0% | |
| TTGTTAATCTTAACCCTTCA+TGG | + | chr1.4:51180201-51180220 | MS.gene47396:CDS | 30.0% | |
| ! | AATTCCTAATGCTTTTGTTG+TGG | + | chr1.4:51180547-51180566 | MS.gene47396:CDS | 30.0% |
| ! | TTCTAAAAGTGAACCATGAA+GGG | - | chr1.4:51180217-51180236 | None:intergenic | 30.0% |
| !! | ATGTTTTATGGTATTTTGGG+TGG | + | chr1.4:51179677-51179696 | MS.gene47396:intron | 30.0% |
| !! | TATAAGTTTTTGGATCACTG+TGG | + | chr1.4:51179902-51179921 | MS.gene47396:CDS | 30.0% |
| !! | TATACCACAACAAAAGCATT+AGG | - | chr1.4:51180554-51180573 | None:intergenic | 30.0% |
| !!! | GCTATTTTAACTGCAATACT+TGG | + | chr1.4:51180242-51180261 | MS.gene47396:CDS | 30.0% |
| !!! | GTGAGAGTTTTGTTTATACT+TGG | + | chr1.4:51180300-51180319 | MS.gene47396:CDS | 30.0% |
| !!! | TTGGGTTACCTATTTTTATG+GGG | + | chr1.4:51179988-51180007 | MS.gene47396:CDS | 30.0% |
| ACTAAAGCTCTTAGAAGAGT+TGG | - | chr1.4:51179522-51179541 | None:intergenic | 35.0% | |
| ACTAGTGTACTTGCAATTGT+TGG | + | chr1.4:51180116-51180135 | MS.gene47396:CDS | 35.0% | |
| AGATCTTCATTTGTGAGTGA+TGG | - | chr1.4:51179231-51179250 | None:intergenic | 35.0% | |
| AGTTGGTTATTCTGCATTGA+TGG | + | chr1.4:51180325-51180344 | MS.gene47396:CDS | 35.0% | |
| ATGGGGCTATTTACATTTGT+TGG | + | chr1.4:51180005-51180024 | MS.gene47396:CDS | 35.0% | |
| GAAATAGCTTCTCTTTGGAT+AGG | + | chr1.4:51179291-51179310 | MS.gene47396:CDS | 35.0% | |
| GGGTAAGTGATTTATACACA+AGG | + | chr1.4:51180405-51180424 | MS.gene47396:CDS | 35.0% | |
| GGTGCATACTATTATTCAAG+GGG | + | chr1.4:51180437-51180456 | MS.gene47396:CDS | 35.0% | |
| GTCTTGAAATAGCTTCTCTT+TGG | + | chr1.4:51179286-51179305 | MS.gene47396:CDS | 35.0% | |
| GTGCATACTATTATTCAAGG+GGG | + | chr1.4:51180438-51180457 | MS.gene47396:CDS | 35.0% | |
| GTTGGTATGGAATTGAATCA+TGG | + | chr1.4:51179550-51179569 | MS.gene47396:intron | 35.0% | |
| GTTTAATGTAGCAGCAATTG+TGG | + | chr1.4:51180460-51180479 | MS.gene47396:CDS | 35.0% | |
| TAGTTGATCTTGGTATGTCA+TGG | + | chr1.4:51179355-51179374 | MS.gene47396:CDS | 35.0% | |
| TCAAATTATCTACCTTGGCT+TGG | + | chr1.4:51179633-51179652 | MS.gene47396:intron | 35.0% | |
| TGGGAACAAAAGAATGATGT+TGG | - | chr1.4:51179409-51179428 | None:intergenic | 35.0% | |
| TTACTTTGCATCTGGCAAAA+GGG | - | chr1.4:51180675-51180694 | None:intergenic | 35.0% | |
| TTATACACAAGGAGTCCTTT+AGG | + | chr1.4:51180416-51180435 | MS.gene47396:CDS | 35.0% | |
| TTGGAATTGTGTTTCAACCT+TGG | + | chr1.4:51180261-51180280 | MS.gene47396:CDS | 35.0% | |
| TTGTGGTATACAACAATGCT+TGG | + | chr1.4:51180564-51180583 | MS.gene47396:CDS | 35.0% | |
| TTGTTCCCACTTATTCTAAC+TGG | + | chr1.4:51179420-51179439 | MS.gene47396:CDS | 35.0% | |
| ! | ACTCTTCTAAGAGCTTTAGT+TGG | + | chr1.4:51179522-51179541 | MS.gene47396:CDS | 35.0% |
| ! | AGATCCTCTTTTGGTATTCA+TGG | + | chr1.4:51179486-51179505 | MS.gene47396:CDS | 35.0% |
| ! | CTTCTAAAAGTGAACCATGA+AGG | - | chr1.4:51180218-51180237 | None:intergenic | 35.0% |
| ! | GTTGGTTATTCTGCATTGAT+GGG | + | chr1.4:51180326-51180345 | MS.gene47396:CDS | 35.0% |
| ! | TTTCAGCAGGGTTTTTGTAT+TGG | + | chr1.4:51180600-51180619 | MS.gene47396:CDS | 35.0% |
| !! | AGATTAACAAGAGCATTTGC+AGG | - | chr1.4:51180191-51180210 | None:intergenic | 35.0% |
| !! | GCAATTGTGGCTTTAATTGT+TGG | + | chr1.4:51180473-51180492 | MS.gene47396:CDS | 35.0% |
| !! | GTTTGGTCTTATGTTAAAGC+TGG | + | chr1.4:51179795-51179814 | MS.gene47396:intron | 35.0% |
| !! | TCATGGTTCACTTTTAGAAG+AGG | + | chr1.4:51180218-51180237 | MS.gene47396:CDS | 35.0% |
| AAAGAGGATCTAGCAAGAAC+TGG | - | chr1.4:51179477-51179496 | None:intergenic | 40.0% | |
| AAGAGGATCTAGCAAGAACT+GGG | - | chr1.4:51179476-51179495 | None:intergenic | 40.0% | |
| AGCACCATGAATACCAAAAG+AGG | - | chr1.4:51179493-51179512 | None:intergenic | 40.0% | |
| AGCCAGCTAGATAGTAAGAT+GGG | - | chr1.4:51179332-51179351 | None:intergenic | 40.0% | |
| CAACTTCTTGGTAGAATTGG+TGG | + | chr1.4:51180086-51180105 | MS.gene47396:CDS | 40.0% | |
| CAATTGGCTATAGTTTGGAG+GGG | + | chr1.4:51179702-51179721 | MS.gene47396:intron | 40.0% | |
| CATGGCCAGTTAGAATAAGT+GGG | - | chr1.4:51179428-51179447 | None:intergenic | 40.0% | |
| CCAATTGGCTATAGTTTGGA+GGG | + | chr1.4:51179701-51179720 | MS.gene47396:intron | 40.0% | |
| CCTCCAAACTATAGCCAATT+GGG | - | chr1.4:51179703-51179722 | None:intergenic | 40.0% | |
| CCTTCTCAAAGAACATTCTC+AGG | + | chr1.4:51179264-51179283 | MS.gene47396:CDS | 40.0% | |
| GAATTGTGTTTCAACCTTGG+AGG | + | chr1.4:51180264-51180283 | MS.gene47396:CDS | 40.0% | |
| TACTTTGCATCTGGCAAAAG+GGG | - | chr1.4:51180674-51180693 | None:intergenic | 40.0% | |
| TCTATTACAGCAGATTCACC+TGG | - | chr1.4:51180650-51180669 | None:intergenic | 40.0% | |
| TTAAGTTTGAGAAGGAAGCC+AGG | + | chr1.4:51180629-51180648 | MS.gene47396:CDS | 40.0% | |
| TTGATCTTGGTATGTCATGG+TGG | + | chr1.4:51179358-51179377 | MS.gene47396:CDS | 40.0% | |
| ! | CCTGAGAATGTTCTTTGAGA+AGG | - | chr1.4:51179267-51179286 | None:intergenic | 40.0% |
| ! | CTAAGAGCTTTAGTTGGTTG+TGG | + | chr1.4:51179528-51179547 | MS.gene47396:CDS | 40.0% |
| ! | GGAATTTTACCTGTTGTTCC+TGG | + | chr1.4:51180494-51180513 | MS.gene47396:CDS | 40.0% |
| ! | GTTCTTGCTAGATCCTCTTT+TGG | + | chr1.4:51179477-51179496 | MS.gene47396:CDS | 40.0% |
| ! | GTTCTTTGAGAAGGTGTAGT+TGG | - | chr1.4:51179258-51179277 | None:intergenic | 40.0% |
| ! | TGCCATATTTTGTACCTGCA+TGG | - | chr1.4:51179446-51179465 | None:intergenic | 40.0% |
| ! | TTAGTTGGTTGTGGTTGGTA+TGG | + | chr1.4:51179537-51179556 | MS.gene47396:intron | 40.0% |
| !! | CTTTGGATAGGACTAGTTGT+TGG | + | chr1.4:51179303-51179322 | MS.gene47396:CDS | 40.0% |
| !! | GGAATTGAATCATGGATTGG+TGG | + | chr1.4:51179558-51179577 | MS.gene47396:intron | 40.0% |
| !! | TCATTTGTGAGTGATGGATG+AGG | - | chr1.4:51179225-51179244 | None:intergenic | 40.0% |
| !! | TGGTCTTATGTTAAAGCTGG+TGG | + | chr1.4:51179798-51179817 | MS.gene47396:intron | 40.0% |
| AATTGGAGGGATTGTTCTGG+TGG | + | chr1.4:51180352-51180371 | MS.gene47396:CDS | 45.0% | |
| ACCAGAACAATCCCTCCAAT+TGG | - | chr1.4:51180353-51180372 | None:intergenic | 45.0% | |
| ACTTTGCATCTGGCAAAAGG+GGG | - | chr1.4:51180673-51180692 | None:intergenic | 45.0% | |
| CCAACTTTCTGCAAGAAACC+AGG | - | chr1.4:51180515-51180534 | None:intergenic | 45.0% | |
| CCCAATTGGCTATAGTTTGG+AGG | + | chr1.4:51179700-51179719 | MS.gene47396:intron | 45.0% | |
| CCCTCCAAACTATAGCCAAT+TGG | - | chr1.4:51179704-51179723 | None:intergenic | 45.0% | |
| CCTGGTTTCTTGCAGAAAGT+TGG | + | chr1.4:51180512-51180531 | MS.gene47396:CDS | 45.0% | |
| CTAGACTTCAAAAGCCTCCA+AGG | - | chr1.4:51180281-51180300 | None:intergenic | 45.0% | |
| CTTATTCTAACTGGCCATGC+AGG | + | chr1.4:51179429-51179448 | MS.gene47396:CDS | 45.0% | |
| GAGCCAGCTAGATAGTAAGA+TGG | - | chr1.4:51179333-51179352 | None:intergenic | 45.0% | |
| GATGTTGGCAAGAACAACTG+TGG | - | chr1.4:51179394-51179413 | None:intergenic | 45.0% | |
| GCATGGCCAGTTAGAATAAG+TGG | - | chr1.4:51179429-51179448 | None:intergenic | 45.0% | |
| GGCCATGCAGGTACAAAATA+TGG | + | chr1.4:51179441-51179460 | MS.gene47396:CDS | 45.0% | |
| GTCCCATCTTACTATCTAGC+TGG | + | chr1.4:51179327-51179346 | MS.gene47396:CDS | 45.0% | |
| TCCAATTGGAGGGATTGTTC+TGG | + | chr1.4:51180349-51180368 | MS.gene47396:CDS | 45.0% | |
| TGCAAGAAACCAGGAACAAC+AGG | - | chr1.4:51180506-51180525 | None:intergenic | 45.0% | |
| TGGCCCAATTGGCTATAGTT+TGG | + | chr1.4:51179697-51179716 | MS.gene47396:intron | 45.0% | |
| ! | CATTGATGGGTCCAATTGGA+GGG | + | chr1.4:51180339-51180358 | MS.gene47396:CDS | 45.0% |
| ! | GAGCTTTAGTTGGTTGTGGT+TGG | + | chr1.4:51179532-51179551 | MS.gene47396:CDS | 45.0% |
| ! | GCTGGCTCTTTAGTTGATCT+TGG | + | chr1.4:51179345-51179364 | MS.gene47396:CDS | 45.0% |
| ! | TCTGCATTGATGGGTCCAAT+TGG | + | chr1.4:51180335-51180354 | MS.gene47396:CDS | 45.0% |
| !! | ATAGTTTGGAGGGGTGTTGA+TGG | + | chr1.4:51179711-51179730 | MS.gene47396:intron | 45.0% |
| CTTGGTATGTCATGGTGGCA+AGG | + | chr1.4:51179363-51179382 | MS.gene47396:CDS | 50.0% | |
| ! | AGTGGTGAAGTACCAAGCCA+AGG | - | chr1.4:51179648-51179667 | None:intergenic | 50.0% |
| ! | GCATTGATGGGTCCAATTGG+AGG | + | chr1.4:51180338-51180357 | MS.gene47396:CDS | 50.0% |
| !! | GGTATTTTGGGTGGCCCAAT+TGG | + | chr1.4:51179686-51179705 | MS.gene47396:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 51179192 | 51180694 | 51179192 | ID=MS.gene47396 |
| chr1.4 | mRNA | 51179192 | 51180694 | 51179192 | ID=MS.gene47396.t1;Parent=MS.gene47396 |
| chr1.4 | exon | 51179192 | 51179553 | 51179192 | ID=MS.gene47396.t1.exon1;Parent=MS.gene47396.t1 |
| chr1.4 | CDS | 51179192 | 51179553 | 51179192 | ID=cds.MS.gene47396.t1;Parent=MS.gene47396.t1 |
| chr1.4 | exon | 51179851 | 51180694 | 51179851 | ID=MS.gene47396.t1.exon2;Parent=MS.gene47396.t1 |
| chr1.4 | CDS | 51179851 | 51180694 | 51179851 | ID=cds.MS.gene47396.t1;Parent=MS.gene47396.t1 |
| Gene Sequence |
| Protein sequence |
