Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57469.t1 | XP_003594885.1 | 99.6 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 1.80E-152 | 548.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57469.t1 | Q9ZV56 | 77.4 | 266 | 55 | 2 | 13 | 277 | 32 | 293 | 4.3e-110 | 399.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57469.t1 | G7INF3 | 99.6 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 1.3e-152 | 548.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene57469 | 0.849046 | 4.16E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene57469 | 0.818767 | 1.65E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene57469 | 0.803627 | 3.19E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene57469 | 0.839061 | 1.98E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene57469 | 0.833968 | 3.93E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene57469 | 0.815556 | 8.70E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene57469 | 0.81978 | 9.70E-53 | -1.69E-46 |
| MS.gene049647 | MS.gene57469 | 0.827687 | 1.36E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene57469 | 0.818264 | 2.15E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene57469 | 0.805957 | 1.04E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene57469 | 0.81932 | 1.24E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene57469 | 0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene050355 | MS.gene57469 | 0.812022 | 5.23E-51 | -1.69E-46 |
| MS.gene050438 | MS.gene57469 | 0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene57469 | 0.868105 | 8.36E-66 | -1.69E-46 |
| MS.gene050605 | MS.gene57469 | 0.837681 | 4.50E-57 | -1.69E-46 |
| MS.gene050680 | MS.gene57469 | 0.847349 | 1.22E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene57469 | 0.864301 | 1.34E-64 | -1.69E-46 |
| MS.gene050721 | MS.gene57469 | 0.863052 | 3.28E-64 | -1.69E-46 |
| MS.gene050724 | MS.gene57469 | 0.860248 | 2.36E-63 | -1.69E-46 |
| MS.gene050750 | MS.gene57469 | 0.852873 | 3.47E-61 | -1.69E-46 |
| MS.gene050759 | MS.gene57469 | 0.814856 | 1.25E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene57469 | 0.812106 | 5.01E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene57469 | 0.828667 | 7.92E-55 | -1.69E-46 |
| MS.gene050820 | MS.gene57469 | 0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene57469 | 0.851885 | 6.63E-61 | -1.69E-46 |
| MS.gene050844 | MS.gene57469 | 0.837082 | 6.41E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene57469 | 0.845733 | 3.38E-59 | -1.69E-46 |
| MS.gene050962 | MS.gene57469 | 0.803961 | 2.71E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene57469 | 0.81854 | 1.86E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene57469 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene57469 | 0.824244 | 8.96E-54 | -1.69E-46 |
| MS.gene051368 | MS.gene57469 | 0.810082 | 1.38E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene57469 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene57469 | -0.825229 | 5.25E-54 | -1.69E-46 |
| MS.gene051926 | MS.gene57469 | -0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene57469 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene57469 | 0.816592 | 5.11E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene57469 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene57469 | 0.817917 | 2.57E-52 | -1.69E-46 |
| MS.gene052426 | MS.gene57469 | 0.858698 | 6.89E-63 | -1.69E-46 |
| MS.gene052516 | MS.gene57469 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene57469 | 0.814482 | 1.51E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene57469 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene57469 | 0.825616 | 4.25E-54 | -1.69E-46 |
| MS.gene052675 | MS.gene57469 | 0.820223 | 7.69E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene57469 | 0.827805 | 1.28E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene57469 | 0.815758 | 7.84E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene57469 | 0.83548 | 1.64E-56 | -1.69E-46 |
| MS.gene052867 | MS.gene57469 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene05288 | MS.gene57469 | 0.831007 | 2.13E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene57469 | 0.819726 | 9.98E-53 | -1.69E-46 |
| MS.gene05289 | MS.gene57469 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene57469 | 0.821022 | 5.03E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene57469 | 0.864001 | 1.66E-64 | -1.69E-46 |
| MS.gene053166 | MS.gene57469 | 0.842094 | 3.19E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene57469 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene57469 | 0.808654 | 2.78E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene57469 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene57469 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene57469 | 0.811562 | 6.58E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene57469 | 0.825735 | 3.99E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene57469 | 0.834178 | 3.48E-56 | -1.69E-46 |
| MS.gene054291 | MS.gene57469 | -0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene054405 | MS.gene57469 | 0.837627 | 4.65E-57 | -1.69E-46 |
| MS.gene054433 | MS.gene57469 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene57469 | 0.827372 | 1.62E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene57469 | 0.859616 | 3.66E-63 | -1.69E-46 |
| MS.gene054472 | MS.gene57469 | 0.839965 | 1.16E-57 | -1.69E-46 |
| MS.gene054559 | MS.gene57469 | 0.826765 | 2.27E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene57469 | 0.802912 | 4.48E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene57469 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene57469 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene57469 | 0.818755 | 1.66E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene57469 | 0.814111 | 1.82E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene57469 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene57469 | 0.840352 | 9.16E-58 | -1.69E-46 |
| MS.gene055227 | MS.gene57469 | 0.817033 | 4.07E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene57469 | 0.805095 | 1.58E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene57469 | 0.833708 | 4.57E-56 | -1.69E-46 |
| MS.gene055357 | MS.gene57469 | 0.808275 | 3.36E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene57469 | 0.837677 | 4.51E-57 | -1.69E-46 |
| MS.gene055608 | MS.gene57469 | 0.815446 | 9.21E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene57469 | 0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene57469 | 0.867309 | 1.51E-65 | -1.69E-46 |
| MS.gene055818 | MS.gene57469 | 0.844569 | 6.97E-59 | -1.69E-46 |
| MS.gene055926 | MS.gene57469 | 0.842155 | 3.07E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene57469 | 0.835047 | 2.11E-56 | -1.69E-46 |
| MS.gene056087 | MS.gene57469 | 0.800388 | 1.48E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene57469 | 0.8087 | 2.72E-50 | -1.69E-46 |
| MS.gene056373 | MS.gene57469 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene57469 | 0.883236 | 5.32E-71 | -1.69E-46 |
| MS.gene057026 | MS.gene57469 | 0.856816 | 2.49E-62 | -1.69E-46 |
| MS.gene057060 | MS.gene57469 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene57469 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene057194 | MS.gene57469 | 0.840947 | 6.40E-58 | -1.69E-46 |
| MS.gene057200 | MS.gene57469 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene57469 | 0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene057395 | MS.gene57469 | 0.811619 | 6.40E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene57469 | 0.837571 | 4.81E-57 | -1.69E-46 |
| MS.gene05761 | MS.gene57469 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene057693 | MS.gene57469 | 0.839079 | 1.96E-57 | -1.69E-46 |
| MS.gene057736 | MS.gene57469 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene57469 | 0.807561 | 4.76E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene57469 | 0.805248 | 1.46E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene57469 | 0.812393 | 4.34E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene57469 | 0.829435 | 5.15E-55 | -1.69E-46 |
| MS.gene058548 | MS.gene57469 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene57469 | 0.822456 | 2.35E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene57469 | 0.815621 | 8.42E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene57469 | 0.840563 | 8.07E-58 | -1.69E-46 |
| MS.gene05897 | MS.gene57469 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene57469 | 0.835186 | 1.94E-56 | -1.69E-46 |
| MS.gene059161 | MS.gene57469 | 0.845017 | 5.28E-59 | -1.69E-46 |
| MS.gene059249 | MS.gene57469 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene57469 | 0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene059317 | MS.gene57469 | 0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene57469 | 0.801505 | 8.72E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene57469 | 0.832258 | 1.05E-55 | -1.69E-46 |
| MS.gene059789 | MS.gene57469 | 0.837905 | 3.94E-57 | -1.69E-46 |
| MS.gene05979 | MS.gene57469 | 0.817131 | 3.87E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene57469 | 0.821737 | 3.44E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene57469 | 0.840986 | 6.25E-58 | -1.69E-46 |
| MS.gene060137 | MS.gene57469 | -0.802445 | 5.59E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene57469 | 0.820094 | 8.22E-53 | -1.69E-46 |
| MS.gene060310 | MS.gene57469 | 0.821486 | 3.94E-53 | -1.69E-46 |
| MS.gene060312 | MS.gene57469 | 0.804318 | 2.29E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene57469 | 0.973282 | 3.64E-136 | -1.69E-46 |
| MS.gene06052 | MS.gene57469 | 0.86072 | 1.70E-63 | -1.69E-46 |
| MS.gene060572 | MS.gene57469 | 0.814287 | 1.66E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene57469 | 0.83858 | 2.64E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene57469 | 0.839942 | 1.17E-57 | -1.69E-46 |
| MS.gene060781 | MS.gene57469 | 0.82145 | 4.01E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene57469 | 0.870316 | 1.60E-66 | -1.69E-46 |
| MS.gene060803 | MS.gene57469 | 0.83549 | 1.63E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene57469 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene57469 | 0.852542 | 4.31E-61 | -1.69E-46 |
| MS.gene061040 | MS.gene57469 | -0.822943 | 1.81E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene57469 | -0.807585 | 4.70E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57469.t1 | MTR_2g035810 | 99.649 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 0.0 | 590 |
| MS.gene57469.t1 | MTR_3g081530 | 83.673 | 245 | 36 | 1 | 13 | 257 | 15 | 255 | 3.81e-156 | 437 |
| MS.gene57469.t1 | MTR_4g064813 | 94.375 | 160 | 8 | 1 | 125 | 284 | 312 | 470 | 1.16e-98 | 297 |
| MS.gene57469.t1 | MTR_4g064813 | 57.971 | 138 | 22 | 4 | 1 | 138 | 1 | 102 | 2.63e-39 | 143 |
| MS.gene57469.t1 | MTR_7g074620 | 31.429 | 245 | 148 | 7 | 11 | 248 | 50 | 281 | 3.52e-28 | 111 |
| MS.gene57469.t1 | MTR_7g074620 | 31.429 | 245 | 148 | 7 | 11 | 248 | 50 | 281 | 3.77e-28 | 112 |
| MS.gene57469.t1 | MTR_7g074620 | 36.957 | 92 | 54 | 2 | 18 | 107 | 258 | 347 | 6.19e-12 | 65.9 |
| MS.gene57469.t1 | MTR_8g101470 | 42.553 | 141 | 73 | 3 | 16 | 152 | 65 | 201 | 3.86e-26 | 106 |
| MS.gene57469.t1 | MTR_8g101470 | 35.484 | 155 | 93 | 4 | 18 | 169 | 256 | 406 | 6.14e-19 | 86.3 |
| MS.gene57469.t1 | MTR_8g101470 | 42.254 | 142 | 74 | 3 | 16 | 153 | 65 | 202 | 9.54e-26 | 105 |
| MS.gene57469.t1 | MTR_7g074620 | 29.213 | 178 | 108 | 6 | 78 | 248 | 5 | 171 | 3.02e-13 | 68.9 |
| MS.gene57469.t1 | MTR_7g074620 | 36.957 | 92 | 54 | 2 | 18 | 107 | 148 | 237 | 4.44e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57469.t1 | AT2G32260 | 78.652 | 267 | 52 | 2 | 12 | 277 | 31 | 293 | 2.77e-156 | 439 |
| MS.gene57469.t1 | AT2G32260 | 77.637 | 237 | 48 | 2 | 42 | 277 | 12 | 244 | 8.74e-135 | 382 |
| MS.gene57469.t1 | AT2G38670 | 31.304 | 230 | 139 | 6 | 14 | 237 | 53 | 269 | 3.23e-28 | 112 |
| MS.gene57469.t1 | AT2G38670 | 32.692 | 156 | 100 | 3 | 18 | 170 | 257 | 410 | 2.60e-17 | 81.6 |
Find 47 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGCTATTGGAAAATTTA+AGG | 0.163999 | 2.2:+50771236 | MS.gene57469:CDS |
| CTTATACAGGTTAAGGCTAT+TGG | 0.232230 | 2.2:+50771225 | MS.gene57469:intron |
| CCAAACACATATCTCCTTGT+TGG | 0.358023 | 2.2:+50768245 | MS.gene57469:CDS |
| TTGATTACCCACGGCACATC+TGG | 0.373662 | 2.2:-50769659 | None:intergenic |
| CCAGTATGTAATGCGTAATC+TGG | 0.373754 | 2.2:+50771323 | MS.gene57469:CDS |
| CTTTGCTTGTTCAAGAGAAC+GGG | 0.376996 | 2.2:-50767715 | None:intergenic |
| CCAGATTACGCATTACATAC+TGG | 0.416241 | 2.2:-50771323 | None:intergenic |
| CCATCAGCATAAACACGAAC+AGG | 0.422644 | 2.2:-50767663 | None:intergenic |
| TGAAGAAGGATGCCACAAAA+TGG | 0.436374 | 2.2:+50772389 | MS.gene57469:CDS |
| GGAACAGTGAGAAGAATTGC+TGG | 0.441857 | 2.2:+50772303 | MS.gene57469:CDS |
| ATTTACGATCTCTTTCACTT+TGG | 0.443426 | 2.2:+50767687 | MS.gene57469:CDS |
| AATGCAGATCGATTAGTTGC+TGG | 0.449023 | 2.2:+50772351 | MS.gene57469:CDS |
| CCAACAAGGAGATATGTGTT+TGG | 0.467300 | 2.2:-50768245 | None:intergenic |
| CCTGTTCGTGTTTATGCTGA+TGG | 0.469877 | 2.2:+50767663 | MS.gene57469:CDS |
| ATCTCTTCTTTATGATGAGT+GGG | 0.482968 | 2.2:+50772589 | MS.gene57469:CDS |
| TGTGCCGTGGGTAATCAATC+AGG | 0.490691 | 2.2:+50769664 | MS.gene57469:CDS |
| GAACAAGATGACTCTGAAGT+TGG | 0.491101 | 2.2:+50767627 | MS.gene57469:CDS |
| GCAAGAGACTGTAGGAAAGA+AGG | 0.492142 | 2.2:+50771584 | MS.gene57469:CDS |
| TTTCTCGAGATGTTTGAAGA+AGG | 0.505057 | 2.2:+50772375 | MS.gene57469:CDS |
| AATCTCTTCTTTATGATGAG+TGG | 0.507907 | 2.2:+50772588 | MS.gene57469:CDS |
| TATGCTGATACAAGTGGAGC+TGG | 0.511409 | 2.2:+50770905 | MS.gene57469:CDS |
| CTTGTTCAAGAGAACGGGCA+TGG | 0.517970 | 2.2:-50767710 | None:intergenic |
| TCTTTGCTTGTTCAAGAGAA+CGG | 0.524315 | 2.2:-50767716 | None:intergenic |
| CATAGTTATGCTGATACAAG+TGG | 0.557570 | 2.2:+50770899 | MS.gene57469:intron |
| TGAGATCACACACAAGTACA+AGG | 0.560848 | 2.2:+50768280 | MS.gene57469:CDS |
| GAAAAGATTGAGAATGAACA+TGG | 0.563205 | 2.2:+50771527 | MS.gene57469:CDS |
| GGATCGTGGTTATTCAAGAA+AGG | 0.563355 | 2.2:+50771344 | MS.gene57469:CDS |
| AAGGAAACAAAGAGGACTGA+AGG | 0.570979 | 2.2:+50771255 | MS.gene57469:CDS |
| CTGGGATGAACCGTACTGAA+TGG | 0.573855 | 2.2:+50772322 | MS.gene57469:CDS |
| TGGGATGAACCGTACTGAAT+GGG | 0.582067 | 2.2:+50772323 | MS.gene57469:CDS |
| TATCATAATGAGAATCATCA+AGG | 0.585536 | 2.2:+50771293 | MS.gene57469:CDS |
| AAGTTATTCCAGATGTGCCG+TGG | 0.587410 | 2.2:+50769651 | MS.gene57469:CDS |
| AACTCCTGATTGATTACCCA+CGG | 0.589451 | 2.2:-50769668 | None:intergenic |
| AAGAAACAGCAAGAGACTGT+AGG | 0.592810 | 2.2:+50771576 | MS.gene57469:CDS |
| TGATACAAGTGGAGCTGGAA+AGG | 0.599993 | 2.2:+50770910 | MS.gene57469:CDS |
| GCTAGGTGTTAGCTATGTCA+AGG | 0.608221 | 2.2:+50771368 | MS.gene57469:CDS |
| CAAGCATAAAATTGACTATG+TGG | 0.611838 | 2.2:+50769697 | MS.gene57469:CDS |
| GAAAATTTAAGGAAACAAAG+AGG | 0.614590 | 2.2:+50771247 | MS.gene57469:CDS |
| CAGAATTCAAGAACAGCTGA+AGG | 0.615936 | 2.2:+50772553 | MS.gene57469:CDS |
| GAACAGTGAGAAGAATTGCT+GGG | 0.618852 | 2.2:+50772304 | MS.gene57469:CDS |
| CATCACTGCAGCATCCAACA+AGG | 0.622451 | 2.2:-50768259 | None:intergenic |
| GGTTATTCAAGAAAGGAGCT+AGG | 0.624474 | 2.2:+50771351 | MS.gene57469:CDS |
| AAAAGATTGAGAATGAACAT+GGG | 0.642829 | 2.2:+50771528 | MS.gene57469:CDS |
| GATTCTCATTATGATATCAG+AGG | 0.655348 | 2.2:-50771286 | None:intergenic |
| AGTTATTCCAGATGTGCCGT+GGG | 0.663969 | 2.2:+50769652 | MS.gene57469:CDS |
| GTAATGCGTAATCTGGATCG+TGG | 0.679784 | 2.2:+50771330 | MS.gene57469:CDS |
| GAGATCACACACAAGTACAA+GGG | 0.705592 | 2.2:+50768281 | MS.gene57469:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAACATAAAAAAG+AGG | - | chr2.2:50768945-50768964 | None:intergenic | 10.0% |
| !! | ATAAATAAACATAAAAAAGA+GGG | - | chr2.2:50768944-50768963 | None:intergenic | 10.0% |
| !! | TATATATTTACAAAATACAA+TGG | - | chr2.2:50771707-50771726 | None:intergenic | 10.0% |
| !! | TTTATATGACTTATTTAAAT+TGG | + | chr2.2:50769517-50769536 | MS.gene57469:intron | 10.0% |
| !! | AAAGTTTAAACAAATAAGAA+AGG | - | chr2.2:50771087-50771106 | None:intergenic | 15.0% |
| !! | ATAATTTAACCAAAGAAAAA+AGG | - | chr2.2:50768377-50768396 | None:intergenic | 15.0% |
| !! | ATTTAATTCCAGTAAAAAAA+AGG | - | chr2.2:50770136-50770155 | None:intergenic | 15.0% |
| !! | TCATATACAACTAAATTAAA+AGG | - | chr2.2:50770972-50770991 | None:intergenic | 15.0% |
| !!! | AACAAAAGAAAACAAATTTT+TGG | - | chr2.2:50769459-50769478 | None:intergenic | 15.0% |
| !!! | CTTTTTCTTAAATTTACATA+AGG | - | chr2.2:50770425-50770444 | None:intergenic | 15.0% |
| !!! | GTTTTTTGTTTTTGTTTTTA+AGG | + | chr2.2:50767938-50767957 | MS.gene57469:intron | 15.0% |
| !!! | TATTTCATCTAGTTATATTT+TGG | + | chr2.2:50769416-50769435 | MS.gene57469:intron | 15.0% |
| !!! | TGTTTTTAAGGTTTTTTTTT+GGG | + | chr2.2:50768008-50768027 | MS.gene57469:intron | 15.0% |
| !!! | TTGTTTTTAAGGTTTTTTTT+TGG | + | chr2.2:50768007-50768026 | MS.gene57469:intron | 15.0% |
| !!! | TTTTTGTTTTGTTGTTTTTA+AGG | + | chr2.2:50767996-50768015 | MS.gene57469:intron | 15.0% |
| !!! | TTTTTTTTGTTGTGTTTTTA+AGG | + | chr2.2:50767966-50767985 | MS.gene57469:intron | 15.0% |
| !! | AAAAATGAAATTGAGAAAGA+TGG | - | chr2.2:50767814-50767833 | None:intergenic | 20.0% |
| !! | AAAATGAAATTGAGAAAGAT+GGG | - | chr2.2:50767813-50767832 | None:intergenic | 20.0% |
| !! | AAATATATAGTCAATCATGT+AGG | - | chr2.2:50770317-50770336 | None:intergenic | 20.0% |
| !! | AAATATATAGTTTAATTGCC+TGG | + | chr2.2:50771718-50771737 | MS.gene57469:intron | 20.0% |
| !! | AACCTGTATAAGAAATTAAT+AGG | - | chr2.2:50771217-50771236 | None:intergenic | 20.0% |
| !! | AAGATCATAACAGATTAAAT+AGG | - | chr2.2:50770018-50770037 | None:intergenic | 20.0% |
| !! | AATAAAAAGAGAAATATAGC+TGG | - | chr2.2:50769760-50769779 | None:intergenic | 20.0% |
| !! | ACTTTGTTGAAAATGTTATT+TGG | + | chr2.2:50770383-50770402 | MS.gene57469:intron | 20.0% |
| !! | ATAAAAATCCTAATTGCAAA+TGG | - | chr2.2:50768091-50768110 | None:intergenic | 20.0% |
| !! | ATTAAATAGGAGACAAAAAA+GGG | - | chr2.2:50770005-50770024 | None:intergenic | 20.0% |
| !! | GGACTAAATATCATAAAAAA+GGG | - | chr2.2:50767850-50767869 | None:intergenic | 20.0% |
| !! | TAAAAATCCTAATTGCAAAT+GGG | - | chr2.2:50768090-50768109 | None:intergenic | 20.0% |
| !! | TAAGTAAATAGAAAATGAGA+AGG | - | chr2.2:50769572-50769591 | None:intergenic | 20.0% |
| !! | TAATATAGTAGTAGTGATAA+TGG | - | chr2.2:50770724-50770743 | None:intergenic | 20.0% |
| !! | TGGACTAAATATCATAAAAA+AGG | - | chr2.2:50767851-50767870 | None:intergenic | 20.0% |
| !! | TTAATTTCTTATACAGGTTA+AGG | + | chr2.2:50771218-50771237 | MS.gene57469:intron | 20.0% |
| !!! | AATTACTTCCTTTTTTTTAC+TGG | + | chr2.2:50770125-50770144 | MS.gene57469:intron | 20.0% |
| !!! | AATTAGGATTTTTATGGTTT+TGG | + | chr2.2:50768096-50768115 | MS.gene57469:intron | 20.0% |
| !!! | ATATTTTTAAGTGAATAGTG+TGG | + | chr2.2:50770331-50770350 | MS.gene57469:intron | 20.0% |
| !!! | ATTTGCAATTAGGATTTTTA+TGG | + | chr2.2:50768090-50768109 | MS.gene57469:intron | 20.0% |
| !!! | CATCTTAAAGCTTATTTTTA+GGG | - | chr2.2:50772432-50772451 | None:intergenic | 20.0% |
| !!! | CTATTATAGGTTTTACATTT+CGG | + | chr2.2:50768749-50768768 | MS.gene57469:intron | 20.0% |
| !!! | GAAACAAGAAAACTTTTAAA+AGG | + | chr2.2:50769909-50769928 | MS.gene57469:intron | 20.0% |
| !!! | GAAATTTTTCATGTTATAAC+AGG | - | chr2.2:50769014-50769033 | None:intergenic | 20.0% |
| !!! | TCATCTTAAAGCTTATTTTT+AGG | - | chr2.2:50772433-50772452 | None:intergenic | 20.0% |
| !!! | TTTATTCCTATTACTAGTTT+GGG | + | chr2.2:50771760-50771779 | MS.gene57469:intron | 20.0% |
| !!! | TTTCTTTTTCCTTTTTTCTT+TGG | + | chr2.2:50768365-50768384 | MS.gene57469:intron | 20.0% |
| !!! | TTTTGTTGTTTGTTAATTGA+AGG | + | chr2.2:50768219-50768238 | MS.gene57469:intron | 20.0% |
| ! | AAAAAATATCATGTGAGAAG+AGG | - | chr2.2:50770273-50770292 | None:intergenic | 25.0% |
| ! | AAAAAATTGAAGAGTTTGTG+CGG | + | chr2.2:50768578-50768597 | MS.gene57469:intron | 25.0% |
| ! | AAAAATATCATGTGAGAAGA+GGG | - | chr2.2:50770272-50770291 | None:intergenic | 25.0% |
| ! | AAAAGATTGAGAATGAACAT+GGG | + | chr2.2:50771528-50771547 | MS.gene57469:CDS | 25.0% |
| ! | AAAAGTAAACACGAGATTAT+AGG | + | chr2.2:50769197-50769216 | MS.gene57469:intron | 25.0% |
| ! | AAACCCAAAAGAACAAAAAA+TGG | - | chr2.2:50767877-50767896 | None:intergenic | 25.0% |
| ! | AAAGAGAATTTATAGGACAT+GGG | + | chr2.2:50771933-50771952 | MS.gene57469:intron | 25.0% |
| ! | AACCCAAAAGAACAAAAAAT+GGG | - | chr2.2:50767876-50767895 | None:intergenic | 25.0% |
| ! | AATGAATTACTAGGAAATGA+TGG | + | chr2.2:50772156-50772175 | MS.gene57469:intron | 25.0% |
| ! | ATAGTGTCTTAATAATGCAA+AGG | - | chr2.2:50772254-50772273 | None:intergenic | 25.0% |
| ! | ATCATTTCCTAGTAATTCAT+TGG | - | chr2.2:50772157-50772176 | None:intergenic | 25.0% |
| ! | ATCCACAAAGTTCTTATATA+TGG | + | chr2.2:50770840-50770859 | MS.gene57469:intron | 25.0% |
| ! | ATGACCTAAAGAGAATTTAT+AGG | + | chr2.2:50771926-50771945 | MS.gene57469:intron | 25.0% |
| ! | ATGTCCTATAAATTCTCTTT+AGG | - | chr2.2:50771933-50771952 | None:intergenic | 25.0% |
| ! | ATTATGTCTGGTCAAAATAT+TGG | + | chr2.2:50769342-50769361 | MS.gene57469:intron | 25.0% |
| ! | CAAATGTCTATCAAAAAACA+TGG | - | chr2.2:50772095-50772114 | None:intergenic | 25.0% |
| ! | CTATGGTAACAAAATAACAA+AGG | - | chr2.2:50770884-50770903 | None:intergenic | 25.0% |
| ! | CTTTATTCCTATTACTAGTT+TGG | + | chr2.2:50771759-50771778 | MS.gene57469:intron | 25.0% |
| ! | GAAAATTTAAGGAAACAAAG+AGG | + | chr2.2:50771247-50771266 | MS.gene57469:CDS | 25.0% |
| ! | GATTAAATAGGAGACAAAAA+AGG | - | chr2.2:50770006-50770025 | None:intergenic | 25.0% |
| ! | TAAAGAGAATTTATAGGACA+TGG | + | chr2.2:50771932-50771951 | MS.gene57469:intron | 25.0% |
| ! | TAAGGCTATTGGAAAATTTA+AGG | + | chr2.2:50771236-50771255 | MS.gene57469:CDS | 25.0% |
| ! | TAATAGATTGATGAAGTGAA+CGG | + | chr2.2:50769159-50769178 | MS.gene57469:intron | 25.0% |
| ! | TATCATAATGAGAATCATCA+AGG | + | chr2.2:50771293-50771312 | MS.gene57469:CDS | 25.0% |
| ! | TATCTTATTATAGATCGACA+AGG | + | chr2.2:50771627-50771646 | MS.gene57469:intron | 25.0% |
| ! | TGAAATGAAGCAAAAGAAAA+AGG | - | chr2.2:50767766-50767785 | None:intergenic | 25.0% |
| ! | TGCCTATTAATTTCTTATAC+AGG | + | chr2.2:50771212-50771231 | MS.gene57469:intron | 25.0% |
| ! | TTAAATAGGAGACAAAAAAG+GGG | - | chr2.2:50770004-50770023 | None:intergenic | 25.0% |
| ! | TTACTTATTTGCTTTCACTA+TGG | + | chr2.2:50769585-50769604 | MS.gene57469:intron | 25.0% |
| ! | TTATCAGCATTCTAAATTTG+TGG | + | chr2.2:50769780-50769799 | MS.gene57469:intron | 25.0% |
| !! | ATACATGATCTCTTATTTGT+AGG | + | chr2.2:50771503-50771522 | MS.gene57469:intron | 25.0% |
| !!! | ATGATCTTTGTTTTCTGTTT+TGG | + | chr2.2:50770030-50770049 | MS.gene57469:intron | 25.0% |
| !!! | CTTCTCACATGATATTTTTT+GGG | + | chr2.2:50770273-50770292 | MS.gene57469:intron | 25.0% |
| !!! | TATCCTCTTTTAATTGCTTA+CGG | + | chr2.2:50769371-50769390 | MS.gene57469:intron | 25.0% |
| !!! | TCATCTAGTTATATTTTGGA+GGG | + | chr2.2:50769420-50769439 | MS.gene57469:intron | 25.0% |
| !!! | TCTTCTCACATGATATTTTT+TGG | + | chr2.2:50770272-50770291 | MS.gene57469:intron | 25.0% |
| !!! | TTCATCTAGTTATATTTTGG+AGG | + | chr2.2:50769419-50769438 | MS.gene57469:intron | 25.0% |
| AAAAATTGAAGAGTTTGTGC+GGG | + | chr2.2:50768579-50768598 | MS.gene57469:intron | 30.0% | |
| AAAAGAACAAAAAATGGGGT+TGG | - | chr2.2:50767871-50767890 | None:intergenic | 30.0% | |
| AAAAGAGGGAAAAGAAAATC+TGG | - | chr2.2:50768930-50768949 | None:intergenic | 30.0% | |
| AAATTTCATCCTAACCAGTA+AGG | + | chr2.2:50769027-50769046 | MS.gene57469:intron | 30.0% | |
| AACTCTTAAAATCTTACGAG+TGG | + | chr2.2:50769479-50769498 | MS.gene57469:intron | 30.0% | |
| AATAGGCATAAGATCATCAA+TGG | - | chr2.2:50771200-50771219 | None:intergenic | 30.0% | |
| AATCTCTTCTTTATGATGAG+TGG | + | chr2.2:50772588-50772607 | MS.gene57469:CDS | 30.0% | |
| AATGAAGCAAAAGAAAAAGG+AGG | - | chr2.2:50767763-50767782 | None:intergenic | 30.0% | |
| AATTTCATCCTAACCAGTAA+GGG | + | chr2.2:50769028-50769047 | MS.gene57469:intron | 30.0% | |
| ACAGAACAATGAAACACATA+TGG | - | chr2.2:50771429-50771448 | None:intergenic | 30.0% | |
| ACCCAAAAGAACAAAAAATG+GGG | - | chr2.2:50767875-50767894 | None:intergenic | 30.0% | |
| ACTAGATGAAATAACATGAC+AGG | - | chr2.2:50769409-50769428 | None:intergenic | 30.0% | |
| AGTTATGTGCAAACTATTCA+TGG | + | chr2.2:50770443-50770462 | MS.gene57469:intron | 30.0% | |
| ATCTCTTCTTTATGATGAGT+GGG | + | chr2.2:50772589-50772608 | MS.gene57469:CDS | 30.0% | |
| ATGAAGCAAAAGAAAAAGGA+GGG | - | chr2.2:50767762-50767781 | None:intergenic | 30.0% | |
| ATTGAACCCAAACTAGTAAT+AGG | - | chr2.2:50771769-50771788 | None:intergenic | 30.0% | |
| ATTTACGATCTCTTTCACTT+TGG | + | chr2.2:50767687-50767706 | MS.gene57469:CDS | 30.0% | |
| CAAACTCAGATAATTCTAAC+AGG | - | chr2.2:50771810-50771829 | None:intergenic | 30.0% | |
| CAAGCATAAAATTGACTATG+TGG | + | chr2.2:50769697-50769716 | MS.gene57469:CDS | 30.0% | |
| CAGAACAATGAAACACATAT+GGG | - | chr2.2:50771428-50771447 | None:intergenic | 30.0% | |
| CATAATCAAAGAGACATTGT+TGG | - | chr2.2:50771043-50771062 | None:intergenic | 30.0% | |
| CATACTTCTATTCAATCTGT+GGG | + | chr2.2:50770779-50770798 | MS.gene57469:intron | 30.0% | |
| CTGTCATTATGTATCAGAAT+AGG | + | chr2.2:50771140-50771159 | MS.gene57469:intron | 30.0% | |
| CTTTAGTAGTCATTCAATTC+TGG | - | chr2.2:50770182-50770201 | None:intergenic | 30.0% | |
| GAAAAGATTGAGAATGAACA+TGG | + | chr2.2:50771527-50771546 | MS.gene57469:CDS | 30.0% | |
| GACCATATATAAGAACTTTG+TGG | - | chr2.2:50770845-50770864 | None:intergenic | 30.0% | |
| GATTCTCATTATGATATCAG+AGG | - | chr2.2:50771289-50771308 | None:intergenic | 30.0% | |
| TAAAGAATATGGTCGAGATT+TGG | + | chr2.2:50768785-50768804 | MS.gene57469:intron | 30.0% | |
| TATTTGCTTTCACTATGGAT+TGG | + | chr2.2:50769590-50769609 | MS.gene57469:intron | 30.0% | |
| TCATACTTCTATTCAATCTG+TGG | + | chr2.2:50770778-50770797 | MS.gene57469:intron | 30.0% | |
| TCATAGTAGCTTCTTAAGTT+AGG | + | chr2.2:50770571-50770590 | MS.gene57469:intron | 30.0% | |
| TCTCTTTAGGTCATATTTCT+AGG | - | chr2.2:50771920-50771939 | None:intergenic | 30.0% | |
| TGCGAGAAAGTAAACAAATA+CGG | - | chr2.2:50771462-50771481 | None:intergenic | 30.0% | |
| TGTAGAATAGTAGATGTATC+AGG | + | chr2.2:50768459-50768478 | MS.gene57469:intron | 30.0% | |
| TGTTAAACTCTGTTCTTCAT+AGG | + | chr2.2:50770511-50770530 | MS.gene57469:intron | 30.0% | |
| TGTTTCCTCAGTATATTTCT+TGG | + | chr2.2:50771111-50771130 | MS.gene57469:intron | 30.0% | |
| TTGATTTCCCATTTGCAATT+AGG | + | chr2.2:50768080-50768099 | MS.gene57469:intron | 30.0% | |
| ! | ATACTCCAAATGTTCAGTTT+TGG | + | chr2.2:50771863-50771882 | MS.gene57469:intron | 30.0% |
| ! | ATCTTTAAAGATCGTGTTTG+CGG | + | chr2.2:50769260-50769279 | MS.gene57469:intron | 30.0% |
| ! | ATGGAAGCTTGAAAATTTTG+AGG | - | chr2.2:50771181-50771200 | None:intergenic | 30.0% |
| ! | ATTTGGAGTATGAACAAATG+TGG | - | chr2.2:50771854-50771873 | None:intergenic | 30.0% |
| ! | CAAATATCTTCATCCTTTTC+TGG | + | chr2.2:50769976-50769995 | MS.gene57469:intron | 30.0% |
| ! | GTCATTTGTTGAATGAGTAT+AGG | + | chr2.2:50770593-50770612 | MS.gene57469:intron | 30.0% |
| ! | TACTCCAAATGTTCAGTTTT+GGG | + | chr2.2:50771864-50771883 | MS.gene57469:intron | 30.0% |
| ! | TTATAGGTTTTACATTTCGG+CGG | + | chr2.2:50768752-50768771 | MS.gene57469:intron | 30.0% |
| ! | TTCGTAATGTCAAAGTACTT+TGG | + | chr2.2:50769309-50769328 | MS.gene57469:intron | 30.0% |
| ! | TTTGGAGTATGAACAAATGT+GGG | - | chr2.2:50771853-50771872 | None:intergenic | 30.0% |
| !! | AATAGTCAACAGAAGTATCA+TGG | - | chr2.2:50769131-50769150 | None:intergenic | 30.0% |
| !! | TGATGAAAGTGTCTATGATT+TGG | + | chr2.2:50768121-50768140 | MS.gene57469:intron | 30.0% |
| !!! | AACCCCATTTTTTGTTCTTT+TGG | + | chr2.2:50767870-50767889 | MS.gene57469:intron | 30.0% |
| !!! | ACCCCATTTTTTGTTCTTTT+GGG | + | chr2.2:50767871-50767890 | MS.gene57469:intron | 30.0% |
| !!! | CTTAAAGCTTATTTTTAGGG+AGG | - | chr2.2:50772429-50772448 | None:intergenic | 30.0% |
| !!! | GATTTGGTTTTTGTTCTTGT+TGG | + | chr2.2:50768137-50768156 | MS.gene57469:intron | 30.0% |
| !!! | TTGGGTGTTGTTTATGATTT+TGG | + | chr2.2:50768026-50768045 | MS.gene57469:intron | 30.0% |
| !!! | TTTTGTTCTTTTGGGTTTGT+TGG | + | chr2.2:50767879-50767898 | MS.gene57469:intron | 30.0% |
| AAAGAGAAATATAGCTGGAC+TGG | - | chr2.2:50769755-50769774 | None:intergenic | 35.0% | |
| AAATGTGAGTGCAGTATTAG+AGG | - | chr2.2:50772025-50772044 | None:intergenic | 35.0% | |
| AAGAGAAATATAGCTGGACT+GGG | - | chr2.2:50769754-50769773 | None:intergenic | 35.0% | |
| AAGGTCGAATATACTGTACT+TGG | - | chr2.2:50769553-50769572 | None:intergenic | 35.0% | |
| AAGTTTGATACCTGATGACA+TGG | + | chr2.2:50768988-50769007 | MS.gene57469:intron | 35.0% | |
| AATAAAGAAGCCCCAAGAAA+CGG | - | chr2.2:50771746-50771765 | None:intergenic | 35.0% | |
| ACAAATGTGGGTGAAATAAC+AGG | - | chr2.2:50771841-50771860 | None:intergenic | 35.0% | |
| AGAACAGAGTTTAACACGAA+AGG | - | chr2.2:50770507-50770526 | None:intergenic | 35.0% | |
| AGGTCGAATATACTGTACTT+GGG | - | chr2.2:50769552-50769571 | None:intergenic | 35.0% | |
| AGTTCAGATGTGGCTATTAT+AGG | + | chr2.2:50768736-50768755 | MS.gene57469:intron | 35.0% | |
| ATTAAGATGAATGACACCAG+AGG | - | chr2.2:50771016-50771035 | None:intergenic | 35.0% | |
| ATTTCATCCTAACCAGTAAG+GGG | + | chr2.2:50769029-50769048 | MS.gene57469:intron | 35.0% | |
| CAAACCCAAAACTGAACATT+TGG | - | chr2.2:50771871-50771890 | None:intergenic | 35.0% | |
| CAAATGTGGGTGAAATAACA+GGG | - | chr2.2:50771840-50771859 | None:intergenic | 35.0% | |
| CACTTGTATCAGCATAACTA+TGG | - | chr2.2:50770901-50770920 | None:intergenic | 35.0% | |
| CATAGTTATGCTGATACAAG+TGG | + | chr2.2:50770899-50770918 | MS.gene57469:intron | 35.0% | |
| CTGTTATATTGCCTCAGTAA+AGG | + | chr2.2:50770472-50770491 | MS.gene57469:intron | 35.0% | |
| CTTATACAGGTTAAGGCTAT+TGG | + | chr2.2:50771225-50771244 | MS.gene57469:intron | 35.0% | |
| GAGTCTATCTCATGTTATTC+TGG | + | chr2.2:50771994-50772013 | MS.gene57469:intron | 35.0% | |
| GTGTGGGAGAATAAAGAATA+TGG | + | chr2.2:50768774-50768793 | MS.gene57469:intron | 35.0% | |
| TAACTTCTGATCGACTGAAT+TGG | + | chr2.2:50772493-50772512 | MS.gene57469:intron | 35.0% | |
| TCTTTGCTTGTTCAAGAGAA+CGG | - | chr2.2:50767719-50767738 | None:intergenic | 35.0% | |
| TTAAGATGAATGACACCAGA+GGG | - | chr2.2:50771015-50771034 | None:intergenic | 35.0% | |
| TTATATTGCCTCAGTAAAGG+AGG | + | chr2.2:50770475-50770494 | MS.gene57469:intron | 35.0% | |
| TTTCTCGAGATGTTTGAAGA+AGG | + | chr2.2:50772375-50772394 | MS.gene57469:CDS | 35.0% | |
| ! | CATTTTCAACCCATTCAGTA+CGG | - | chr2.2:50772335-50772354 | None:intergenic | 35.0% |
| ! | GCAAACACGATCTTTAAAGA+TGG | - | chr2.2:50769261-50769280 | None:intergenic | 35.0% |
| ! | GTTGGTTTACTGATATACCA+GGG | + | chr2.2:50772515-50772534 | MS.gene57469:intron | 35.0% |
| !! | GTCATATTTCTAGGCAATGT+GGG | - | chr2.2:50771911-50771930 | None:intergenic | 35.0% |
| !! | TCTGGCTTTAAAGTTCTTGA+AGG | - | chr2.2:50770164-50770183 | None:intergenic | 35.0% |
| !!! | AATGGTTTTTTGCGGTTCAA+TGG | + | chr2.2:50768639-50768658 | MS.gene57469:intron | 35.0% |
| !!! | TTTGGGTTTGTTGGTTTTCA+TGG | + | chr2.2:50767888-50767907 | MS.gene57469:intron | 35.0% |
| AACTCCTGATTGATTACCCA+CGG | - | chr2.2:50769671-50769690 | None:intergenic | 40.0% | |
| AAGAAACAGCAAGAGACTGT+AGG | + | chr2.2:50771576-50771595 | MS.gene57469:CDS | 40.0% | |
| AAGCCAAACTATGTGCAGAT+AGG | + | chr2.2:50772282-50772301 | MS.gene57469:intron | 40.0% | |
| AAGGAAACAAAGAGGACTGA+AGG | + | chr2.2:50771255-50771274 | MS.gene57469:CDS | 40.0% | |
| ACACTCAAGACTGTAACATC+CGG | - | chr2.2:50772126-50772145 | None:intergenic | 40.0% | |
| ACTCCAAAAGCTATCTCACA+AGG | - | chr2.2:50771968-50771987 | None:intergenic | 40.0% | |
| ACTGCACAGTGGTTCAATAA+TGG | + | chr2.2:50768679-50768698 | MS.gene57469:intron | 40.0% | |
| ATAGACATTTGCCTACGTTC+CGG | + | chr2.2:50772104-50772123 | MS.gene57469:intron | 40.0% | |
| ATAGACGTCACTCACTTTGT+TGG | + | chr2.2:50769070-50769089 | MS.gene57469:intron | 40.0% | |
| ATGTCCTGTGGTAAGCATTA+AGG | + | chr2.2:50772058-50772077 | MS.gene57469:intron | 40.0% | |
| ATGTTACAGTCTTGAGTGTG+CGG | + | chr2.2:50772127-50772146 | MS.gene57469:intron | 40.0% | |
| ATTATTGAACCACTGTGCAG+TGG | - | chr2.2:50768680-50768699 | None:intergenic | 40.0% | |
| CAAAAAAGGGGAACCAGAAA+AGG | - | chr2.2:50769992-50770011 | None:intergenic | 40.0% | |
| CACTTTGTTGGGTAATCGAA+TGG | + | chr2.2:50769082-50769101 | MS.gene57469:intron | 40.0% | |
| CAGAATTCAAGAACAGCTGA+AGG | + | chr2.2:50772553-50772572 | MS.gene57469:CDS | 40.0% | |
| CAGCCGTAAGCAATTAAAAG+AGG | - | chr2.2:50769377-50769396 | None:intergenic | 40.0% | |
| CATATGGGTAAGCAAAACAG+AGG | - | chr2.2:50771413-50771432 | None:intergenic | 40.0% | |
| CATGGGACTTAAAAAGTTGC+AGG | + | chr2.2:50771545-50771564 | MS.gene57469:CDS | 40.0% | |
| CCAAACACATATCTCCTTGT+TGG | + | chr2.2:50768245-50768264 | MS.gene57469:CDS | 40.0% | |
| CCAACAAGGAGATATGTGTT+TGG | - | chr2.2:50768248-50768267 | None:intergenic | 40.0% | |
| CCAGATTACGCATTACATAC+TGG | - | chr2.2:50771326-50771345 | None:intergenic | 40.0% | |
| CCAGTATGTAATGCGTAATC+TGG | + | chr2.2:50771323-50771342 | MS.gene57469:CDS | 40.0% | |
| CTGCACAGTGGTTCAATAAT+GGG | + | chr2.2:50768680-50768699 | MS.gene57469:intron | 40.0% | |
| CTTTGCTTGTTCAAGAGAAC+GGG | - | chr2.2:50767718-50767737 | None:intergenic | 40.0% | |
| GAACAGTGAGAAGAATTGCT+GGG | + | chr2.2:50772304-50772323 | MS.gene57469:CDS | 40.0% | |
| GAGATCACACACAAGTACAA+GGG | + | chr2.2:50768281-50768300 | MS.gene57469:CDS | 40.0% | |
| GATTGCTTCTAGTGGTGAAT+AGG | + | chr2.2:50768817-50768836 | MS.gene57469:intron | 40.0% | |
| GGATCGTGGTTATTCAAGAA+AGG | + | chr2.2:50771344-50771363 | MS.gene57469:CDS | 40.0% | |
| GGGAAAAGAAAATCTGGCAT+AGG | - | chr2.2:50768924-50768943 | None:intergenic | 40.0% | |
| GGTTATTCAAGAAAGGAGCT+AGG | + | chr2.2:50771351-50771370 | MS.gene57469:CDS | 40.0% | |
| GTGAGTGACGTCTATGATAA+CGG | - | chr2.2:50769065-50769084 | None:intergenic | 40.0% | |
| GTTCCTATCTGCACATAGTT+TGG | - | chr2.2:50772288-50772307 | None:intergenic | 40.0% | |
| TACTGCCTGCTATCATTACT+TGG | - | chr2.2:50768606-50768625 | None:intergenic | 40.0% | |
| TAGACGTCACTCACTTTGTT+GGG | + | chr2.2:50769071-50769090 | MS.gene57469:intron | 40.0% | |
| TCCTCAGTATATTTCTTGGC+TGG | + | chr2.2:50771115-50771134 | MS.gene57469:intron | 40.0% | |
| TGAAGAAGGATGCCACAAAA+TGG | + | chr2.2:50772389-50772408 | MS.gene57469:CDS | 40.0% | |
| TGAGATCACACACAAGTACA+AGG | + | chr2.2:50768280-50768299 | MS.gene57469:CDS | 40.0% | |
| TGTTTACTTTCTCGCATGCT+GGG | + | chr2.2:50771466-50771485 | MS.gene57469:intron | 40.0% | |
| TTATAACAGGCCATGTCATC+AGG | - | chr2.2:50769001-50769020 | None:intergenic | 40.0% | |
| TTCTGATCGACTGAATTGGT+TGG | + | chr2.2:50772497-50772516 | MS.gene57469:intron | 40.0% | |
| TTGTTTACTTTCTCGCATGC+TGG | + | chr2.2:50771465-50771484 | MS.gene57469:intron | 40.0% | |
| TTTCATCCTAACCAGTAAGG+GGG | + | chr2.2:50769030-50769049 | MS.gene57469:intron | 40.0% | |
| ! | AAATATAGCTGGACTGGGAT+TGG | - | chr2.2:50769749-50769768 | None:intergenic | 40.0% |
| ! | AATGCAGATCGATTAGTTGC+TGG | + | chr2.2:50772351-50772370 | MS.gene57469:CDS | 40.0% |
| ! | AGAGAGATCCAACCATTTTG+TGG | - | chr2.2:50772404-50772423 | None:intergenic | 40.0% |
| ! | ATAAAACCCCCTTACTGGTT+AGG | - | chr2.2:50769039-50769058 | None:intergenic | 40.0% |
| ! | TAGTTGATTCCACAAGCTCA+CGG | - | chr2.2:50768541-50768560 | None:intergenic | 40.0% |
| ! | TCACCTTGTGAGATAGCTTT+TGG | + | chr2.2:50771962-50771981 | MS.gene57469:intron | 40.0% |
| ! | TCTAGCTTCAAGTTCAGATG+TGG | + | chr2.2:50768726-50768745 | MS.gene57469:intron | 40.0% |
| !! | ACTGGGATTGGTTGATCTTA+CGG | - | chr2.2:50769737-50769756 | None:intergenic | 40.0% |
| !! | CTTTTAATTGCTTACGGCTG+TGG | + | chr2.2:50769377-50769396 | MS.gene57469:intron | 40.0% |
| !! | GAACAAGATGACTCTGAAGT+TGG | + | chr2.2:50767627-50767646 | MS.gene57469:CDS | 40.0% |
| !! | GGTCATATTTCTAGGCAATG+TGG | - | chr2.2:50771912-50771931 | None:intergenic | 40.0% |
| !! | GGTTGGTTTACTGATATACC+AGG | + | chr2.2:50772514-50772533 | MS.gene57469:intron | 40.0% |
| !!! | GTTCAGTTTTGGGTTTGAGA+GGG | + | chr2.2:50771874-50771893 | MS.gene57469:intron | 40.0% |
| !!! | TGCGGGTTAATGGTTTTTTG+CGG | + | chr2.2:50768631-50768650 | MS.gene57469:intron | 40.0% |
| !!! | TGTTCAGTTTTGGGTTTGAG+AGG | + | chr2.2:50771873-50771892 | MS.gene57469:intron | 40.0% |
| AAGTTATTCCAGATGTGCCG+TGG | + | chr2.2:50769651-50769670 | MS.gene57469:CDS | 45.0% | |
| AATTGCCTGGATCCGTTTCT+TGG | + | chr2.2:50771731-50771750 | MS.gene57469:intron | 45.0% | |
| AGATCGTGTTTGCGGATAAC+TGG | + | chr2.2:50769268-50769287 | MS.gene57469:intron | 45.0% | |
| AGTTATTCCAGATGTGCCGT+GGG | + | chr2.2:50769652-50769671 | MS.gene57469:CDS | 45.0% | |
| AGTTCAATTGCTCTTGCTGC+AGG | + | chr2.2:50769618-50769637 | MS.gene57469:intron | 45.0% | |
| ATTGCCTGGATCCGTTTCTT+GGG | + | chr2.2:50771732-50771751 | MS.gene57469:intron | 45.0% | |
| CACACCTTAATGCTTACCAC+AGG | - | chr2.2:50772065-50772084 | None:intergenic | 45.0% | |
| CCATCAGCATAAACACGAAC+AGG | - | chr2.2:50767666-50767685 | None:intergenic | 45.0% | |
| CCTGTTCGTGTTTATGCTGA+TGG | + | chr2.2:50767663-50767682 | MS.gene57469:CDS | 45.0% | |
| CGGCAGACCAATGAATTACT+AGG | + | chr2.2:50772147-50772166 | MS.gene57469:intron | 45.0% | |
| CTCAGACACAACTACAGTGA+CGG | + | chr2.2:50769856-50769875 | MS.gene57469:intron | 45.0% | |
| CTTCTAGTGGTGAATAGGCT+AGG | + | chr2.2:50768822-50768841 | MS.gene57469:intron | 45.0% | |
| GAAGGATGCCACAAAATGGT+TGG | + | chr2.2:50772393-50772412 | MS.gene57469:intron | 45.0% | |
| GATGAAGTGAACGGTGAGAT+TGG | + | chr2.2:50769168-50769187 | MS.gene57469:intron | 45.0% | |
| GCAAGAGACTGTAGGAAAGA+AGG | + | chr2.2:50771584-50771603 | MS.gene57469:CDS | 45.0% | |
| GCCAGCCAAGAAATATACTG+AGG | - | chr2.2:50771119-50771138 | None:intergenic | 45.0% | |
| GCTAGGTGTTAGCTATGTCA+AGG | + | chr2.2:50771368-50771387 | MS.gene57469:CDS | 45.0% | |
| GCTTCAACGATTGCTTCTAG+TGG | + | chr2.2:50768809-50768828 | MS.gene57469:intron | 45.0% | |
| GGAACAGTGAGAAGAATTGC+TGG | + | chr2.2:50772303-50772322 | MS.gene57469:CDS | 45.0% | |
| GGAGAATAAAACCCCCTTAC+TGG | - | chr2.2:50769044-50769063 | None:intergenic | 45.0% | |
| GGCGTCTTTCTGATTATGTC+TGG | + | chr2.2:50769330-50769349 | MS.gene57469:intron | 45.0% | |
| GTAATGCGTAATCTGGATCG+TGG | + | chr2.2:50771330-50771349 | MS.gene57469:CDS | 45.0% | |
| TAGGTGCGATGGCAATGAAA+TGG | + | chr2.2:50768841-50768860 | MS.gene57469:intron | 45.0% | |
| TATGCTGATACAAGTGGAGC+TGG | + | chr2.2:50770905-50770924 | MS.gene57469:CDS | 45.0% | |
| TCGAGAAGAAGCAAGCTTCA+GGG | - | chr2.2:50768894-50768913 | None:intergenic | 45.0% | |
| TCTCTTCGTCACTGCAAGTT+CGG | + | chr2.2:50768338-50768357 | MS.gene57469:intron | 45.0% | |
| TGATACAAGTGGAGCTGGAA+AGG | + | chr2.2:50770910-50770929 | MS.gene57469:CDS | 45.0% | |
| TGGGATGAACCGTACTGAAT+GGG | + | chr2.2:50772323-50772342 | MS.gene57469:CDS | 45.0% | |
| TGTGCAAACTATTCATGGCG+AGG | + | chr2.2:50770448-50770467 | MS.gene57469:intron | 45.0% | |
| ! | ATAGCAGGCAGTAGTTTGTG+CGG | + | chr2.2:50768613-50768632 | MS.gene57469:intron | 45.0% |
| ! | CACAGTGGTTCAATAATGGG+TGG | + | chr2.2:50768683-50768702 | MS.gene57469:intron | 45.0% |
| ! | CAGTAGTTTGTGCGGGTTAA+TGG | + | chr2.2:50768621-50768640 | MS.gene57469:intron | 45.0% |
| ! | CTTTTCTTTCCGTGAGCTTG+TGG | + | chr2.2:50768529-50768548 | MS.gene57469:intron | 45.0% |
| ! | GTTTTACATTTCGGCGGTGT+GGG | + | chr2.2:50768758-50768777 | MS.gene57469:intron | 45.0% |
| ! | TTCATGCTCTAGATGTCCTG+TGG | + | chr2.2:50772046-50772065 | MS.gene57469:intron | 45.0% |
| !! | TGGTTCAATAATGGGTGGTG+CGG | + | chr2.2:50768688-50768707 | MS.gene57469:intron | 45.0% |
| !!! | TGTTTTTTCTTCCCACCCTC+TGG | + | chr2.2:50770997-50771016 | MS.gene57469:intron | 45.0% |
| !! | CTATTAATAAAAAATATTAT+TGG | - | chr2.2:50771663-50771682 | None:intergenic | 5.0% |
| !!! | AATATAATAGTATTTTAATT+TGG | + | chr2.2:50769932-50769951 | MS.gene57469:intron | 5.0% |
| AGATGAATGACACCAGAGGG+TGG | - | chr2.2:50771012-50771031 | None:intergenic | 50.0% | |
| ATTGCTTACGGCTGTGGAGT+AGG | + | chr2.2:50769383-50769402 | MS.gene57469:intron | 50.0% | |
| CAATTGCTCTTGCTGCAGGT+GGG | + | chr2.2:50769622-50769641 | MS.gene57469:intron | 50.0% | |
| CATCACTGCAGCATCCAACA+AGG | - | chr2.2:50768262-50768281 | None:intergenic | 50.0% | |
| CGGGTCCAAGTAATGATAGC+AGG | + | chr2.2:50768598-50768617 | MS.gene57469:intron | 50.0% | |
| CGTCACTGTAGTTGTGTCTG+AGG | - | chr2.2:50769858-50769877 | None:intergenic | 50.0% | |
| CTCGAGAAGAAGCAAGCTTC+AGG | - | chr2.2:50768895-50768914 | None:intergenic | 50.0% | |
| CTGGGATGAACCGTACTGAA+TGG | + | chr2.2:50772322-50772341 | MS.gene57469:CDS | 50.0% | |
| CTTGTTCAAGAGAACGGGCA+TGG | - | chr2.2:50767713-50767732 | None:intergenic | 50.0% | |
| GACTGTAACATCCGGAACGT+AGG | - | chr2.2:50772118-50772137 | None:intergenic | 50.0% | |
| GATGAATGACACCAGAGGGT+GGG | - | chr2.2:50771011-50771030 | None:intergenic | 50.0% | |
| GGATAACGCCTCCTTTACTG+AGG | - | chr2.2:50770486-50770505 | None:intergenic | 50.0% | |
| GGTAAGCAAAACAGAGGAGC+TGG | - | chr2.2:50771407-50771426 | None:intergenic | 50.0% | |
| TCAATTGCTCTTGCTGCAGG+TGG | + | chr2.2:50769621-50769640 | MS.gene57469:intron | 50.0% | |
| TCGTGTTTGCGGATAACTGG+CGG | + | chr2.2:50769271-50769290 | MS.gene57469:intron | 50.0% | |
| TGTGCCGTGGGTAATCAATC+AGG | + | chr2.2:50769664-50769683 | MS.gene57469:CDS | 50.0% | |
| TTACTTTCTCGCATGCTGGG+AGG | + | chr2.2:50771469-50771488 | MS.gene57469:intron | 50.0% | |
| TTGATTACCCACGGCACATC+TGG | - | chr2.2:50769662-50769681 | None:intergenic | 50.0% | |
| TTGCCTGGATCCGTTTCTTG+GGG | + | chr2.2:50771733-50771752 | MS.gene57469:intron | 50.0% | |
| ! | GACAGTTTTCCACTGCACAG+TGG | + | chr2.2:50768668-50768687 | MS.gene57469:intron | 50.0% |
| ! | GGTTTTACATTTCGGCGGTG+TGG | + | chr2.2:50768757-50768776 | MS.gene57469:intron | 50.0% |
| ! | TAGCAGGCAGTAGTTTGTGC+GGG | + | chr2.2:50768614-50768633 | MS.gene57469:intron | 50.0% |
| ! | TGTCTCTGATTGCTGTTCCC+TGG | - | chr2.2:50772535-50772554 | None:intergenic | 50.0% |
| !! | TTCAATAATGGGTGGTGCGG+TGG | + | chr2.2:50768691-50768710 | MS.gene57469:intron | 50.0% |
| AAGCCCCAAGAAACGGATCC+AGG | - | chr2.2:50771739-50771758 | None:intergenic | 55.0% | |
| CAGGGCTCTCGAAGACAACA+AGG | - | chr2.2:50768876-50768895 | None:intergenic | 55.0% | |
| GGTGAATAGGCTAGGTGCGA+TGG | + | chr2.2:50768830-50768849 | MS.gene57469:intron | 55.0% | |
| TATGTGTGCGTGCGCGTGTG+CGG | - | chr2.2:50770082-50770101 | None:intergenic | 60.0% | |
| TGGGTGGTGCGGTGGATCTG+TGG | + | chr2.2:50768699-50768718 | MS.gene57469:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 50767621 | 50772670 | 50767621 | ID=MS.gene57469 |
| chr2.2 | mRNA | 50767621 | 50772670 | 50767621 | ID=MS.gene57469.t1;Parent=MS.gene57469 |
| chr2.2 | exon | 50767621 | 50767742 | 50767621 | ID=MS.gene57469.t1.exon1;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50767621 | 50767742 | 50767621 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50768241 | 50768354 | 50768241 | ID=MS.gene57469.t1.exon2;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50768241 | 50768354 | 50768241 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50769640 | 50769735 | 50769640 | ID=MS.gene57469.t1.exon3;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50769640 | 50769735 | 50769640 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50770904 | 50770946 | 50770904 | ID=MS.gene57469.t1.exon4;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50770904 | 50770946 | 50770904 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50771234 | 50771389 | 50771234 | ID=MS.gene57469.t1.exon5;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50771234 | 50771389 | 50771234 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50771525 | 50771605 | 50771525 | ID=MS.gene57469.t1.exon6;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50771525 | 50771605 | 50771525 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50772300 | 50772410 | 50772300 | ID=MS.gene57469.t1.exon7;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50772300 | 50772410 | 50772300 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| chr2.2 | exon | 50772536 | 50772670 | 50772536 | ID=MS.gene57469.t1.exon8;Parent=MS.gene57469.t1 |
| chr2.2 | CDS | 50772536 | 50772670 | 50772536 | ID=cds.MS.gene57469.t1;Parent=MS.gene57469.t1 |
| Gene Sequence |
| Protein sequence |
