Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58160.t1 | XP_003630122.2 | 97.8 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 3.40E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58160.t1 | G7LBB8 | 97.8 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 2.4e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58160 | 0.807085 | 6.00E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene58160 | 0.813776 | 2.16E-51 | -1.69E-46 |
| MS.gene049284 | MS.gene58160 | 0.842764 | 2.12E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene58160 | 0.840486 | 8.45E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene58160 | 0.84281 | 2.06E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene58160 | 0.813248 | 2.82E-51 | -1.69E-46 |
| MS.gene049389 | MS.gene58160 | 0.832292 | 1.03E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene58160 | 0.830164 | 3.43E-55 | -1.69E-46 |
| MS.gene049491 | MS.gene58160 | 0.875477 | 2.99E-68 | -1.69E-46 |
| MS.gene049614 | MS.gene58160 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene58160 | 0.853297 | 2.62E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene58160 | 0.843817 | 1.11E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene58160 | 0.871959 | 4.59E-67 | -1.69E-46 |
| MS.gene049760 | MS.gene58160 | 0.810938 | 8.99E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene58160 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene58160 | 0.81887 | 1.56E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene58160 | 0.85778 | 1.29E-62 | -1.69E-46 |
| MS.gene050099 | MS.gene58160 | 0.826903 | 2.10E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene58160 | 0.854367 | 1.29E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene58160 | 0.894686 | 1.95E-75 | -1.69E-46 |
| MS.gene050397 | MS.gene58160 | 0.846656 | 1.89E-59 | -1.69E-46 |
| MS.gene050404 | MS.gene58160 | 0.82026 | 7.54E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene58160 | 0.826145 | 3.19E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene58160 | 0.854476 | 1.20E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene58160 | 0.8418 | 3.81E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene58160 | 0.873741 | 1.16E-67 | -1.69E-46 |
| MS.gene05053 | MS.gene58160 | 0.822657 | 2.11E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene58160 | 0.855895 | 4.64E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene58160 | 0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene58160 | 0.82724 | 1.74E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene58160 | 0.845277 | 4.49E-59 | -1.69E-46 |
| MS.gene05101 | MS.gene58160 | 0.87959 | 1.10E-69 | -1.69E-46 |
| MS.gene05105 | MS.gene58160 | 0.831023 | 2.11E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene58160 | 0.872101 | 4.12E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene58160 | 0.817368 | 3.42E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene58160 | 0.803721 | 3.05E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene58160 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene58160 | 0.803762 | 2.99E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene58160 | 0.812295 | 4.56E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene58160 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene051877 | MS.gene58160 | 0.817848 | 2.66E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene58160 | 0.810018 | 1.42E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene58160 | 0.897363 | 1.51E-76 | -1.69E-46 |
| MS.gene052178 | MS.gene58160 | 0.851204 | 1.03E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene58160 | 0.909817 | 3.74E-82 | -1.69E-46 |
| MS.gene052207 | MS.gene58160 | 0.803319 | 3.69E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene58160 | 0.845721 | 3.40E-59 | -1.69E-46 |
| MS.gene052287 | MS.gene58160 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene052290 | MS.gene58160 | 0.823749 | 1.17E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene58160 | 0.888656 | 4.86E-73 | -1.69E-46 |
| MS.gene052326 | MS.gene58160 | 0.852676 | 3.95E-61 | -1.69E-46 |
| MS.gene05233 | MS.gene58160 | -0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene58160 | 0.8991 | 2.77E-77 | -1.69E-46 |
| MS.gene052421 | MS.gene58160 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene58160 | 0.82845 | 8.93E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene58160 | 0.834609 | 2.72E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene58160 | 0.882524 | 9.69E-71 | -1.69E-46 |
| MS.gene053103 | MS.gene58160 | 0.837734 | 4.36E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene58160 | 0.80299 | 4.32E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene58160 | 0.806927 | 6.49E-50 | -1.69E-46 |
| MS.gene053181 | MS.gene58160 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene58160 | 0.858155 | 1.00E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene58160 | 0.829962 | 3.84E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene58160 | 0.872872 | 2.28E-67 | -1.69E-46 |
| MS.gene053559 | MS.gene58160 | 0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene58160 | 0.800334 | 1.51E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene58160 | 0.880375 | 5.78E-70 | -1.69E-46 |
| MS.gene053907 | MS.gene58160 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene58160 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene58160 | 0.861871 | 7.56E-64 | -1.69E-46 |
| MS.gene054349 | MS.gene58160 | 0.826463 | 2.68E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene58160 | 0.832455 | 9.36E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene58160 | 0.823251 | 1.53E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene58160 | 0.830112 | 3.53E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene58160 | 0.813921 | 2.00E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene58160 | 0.815834 | 7.55E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene58160 | 0.815683 | 8.15E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene58160 | 0.839696 | 1.36E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene58160 | 0.801871 | 7.34E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene58160 | 0.863997 | 1.67E-64 | -1.69E-46 |
| MS.gene055254 | MS.gene58160 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene58160 | 0.869434 | 3.10E-66 | -1.69E-46 |
| MS.gene055390 | MS.gene58160 | 0.87387 | 1.05E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene58160 | 0.820194 | 7.80E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene58160 | 0.827303 | 1.69E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene58160 | 0.889183 | 3.04E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene58160 | 0.859283 | 4.60E-63 | -1.69E-46 |
| MS.gene055499 | MS.gene58160 | 0.804281 | 2.33E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene58160 | 0.825055 | 5.78E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene58160 | 0.831797 | 1.36E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene58160 | 0.806177 | 9.34E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene58160 | 0.813957 | 1.97E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene58160 | 0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene58160 | 0.857066 | 2.10E-62 | -1.69E-46 |
| MS.gene056314 | MS.gene58160 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene58160 | 0.849205 | 3.76E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene58160 | 0.837049 | 6.54E-57 | -1.69E-46 |
| MS.gene056451 | MS.gene58160 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene58160 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene58160 | 0.894213 | 3.05E-75 | -1.69E-46 |
| MS.gene056612 | MS.gene58160 | 0.863364 | 2.62E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene58160 | 0.840394 | 8.93E-58 | -1.69E-46 |
| MS.gene056719 | MS.gene58160 | 0.826311 | 2.91E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene58160 | 0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene58160 | -0.82792 | 1.20E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene58160 | 0.807419 | 5.10E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene58160 | 0.846729 | 1.81E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene58160 | 0.8289 | 6.95E-55 | -1.69E-46 |
| MS.gene057123 | MS.gene58160 | 0.821792 | 3.34E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene58160 | 0.820487 | 6.69E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene58160 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene58160 | 0.846415 | 2.20E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene58160 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene057295 | MS.gene58160 | 0.840986 | 6.25E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene58160 | 0.837745 | 4.34E-57 | -1.69E-46 |
| MS.gene05735 | MS.gene58160 | 0.815427 | 9.30E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene58160 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene58160 | 0.803607 | 3.22E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene58160 | 0.873876 | 1.05E-67 | -1.69E-46 |
| MS.gene057449 | MS.gene58160 | 0.873303 | 1.63E-67 | -1.69E-46 |
| MS.gene057450 | MS.gene58160 | 0.88008 | 7.37E-70 | -1.69E-46 |
| MS.gene057537 | MS.gene58160 | 0.813353 | 2.67E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene58160 | 0.829887 | 4.00E-55 | -1.69E-46 |
| MS.gene057779 | MS.gene58160 | 0.802531 | 5.37E-49 | -1.69E-46 |
| MS.gene057782 | MS.gene58160 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene58160 | 0.820101 | 8.19E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene58160 | 0.833357 | 5.59E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene58160 | 0.897852 | 9.41E-77 | -1.69E-46 |
| MS.gene058006 | MS.gene58160 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene058082 | MS.gene58160 | 0.849195 | 3.78E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene58160 | 0.890041 | 1.41E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene58160 | 0.834217 | 3.41E-56 | -1.69E-46 |
| MS.gene058233 | MS.gene58160 | 0.828619 | 8.13E-55 | -1.69E-46 |
| MS.gene058276 | MS.gene58160 | 0.833975 | 3.92E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene58160 | 0.878344 | 3.03E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene58160 | 0.854536 | 1.15E-61 | -1.69E-46 |
| MS.gene05842 | MS.gene58160 | 0.823408 | 1.41E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene58160 | 0.900118 | 1.01E-77 | -1.69E-46 |
| MS.gene058749 | MS.gene58160 | 0.80063 | 1.32E-48 | -1.69E-46 |
| MS.gene058787 | MS.gene58160 | 0.845785 | 3.27E-59 | -1.69E-46 |
| MS.gene058845 | MS.gene58160 | 0.833776 | 4.39E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene58160 | 0.814993 | 1.16E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene58160 | 0.877663 | 5.24E-69 | -1.69E-46 |
| MS.gene058993 | MS.gene58160 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene58160 | 0.888648 | 4.90E-73 | -1.69E-46 |
| MS.gene059285 | MS.gene58160 | 0.833417 | 5.40E-56 | -1.69E-46 |
| MS.gene059294 | MS.gene58160 | 0.829156 | 6.03E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene58160 | 0.821509 | 3.89E-53 | -1.69E-46 |
| MS.gene059342 | MS.gene58160 | 0.838876 | 2.22E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene58160 | 0.844625 | 6.73E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene58160 | 0.822422 | 2.39E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene58160 | 0.87156 | 6.23E-67 | -1.69E-46 |
| MS.gene059536 | MS.gene58160 | 0.830155 | 3.44E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene58160 | 0.910418 | 1.92E-82 | -1.69E-46 |
| MS.gene05959 | MS.gene58160 | 0.853894 | 1.77E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene58160 | 0.880397 | 5.68E-70 | -1.69E-46 |
| MS.gene059688 | MS.gene58160 | 0.88835 | 6.38E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene58160 | 0.902811 | 6.61E-79 | -1.69E-46 |
| MS.gene059695 | MS.gene58160 | 0.897774 | 1.01E-76 | -1.69E-46 |
| MS.gene059708 | MS.gene58160 | 0.851833 | 6.86E-61 | -1.69E-46 |
| MS.gene059711 | MS.gene58160 | 0.801426 | 9.05E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene58160 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene58160 | 0.87561 | 2.69E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene58160 | 0.895418 | 9.77E-76 | -1.69E-46 |
| MS.gene059899 | MS.gene58160 | 0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene58160 | 0.849787 | 2.58E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene58160 | 0.817423 | 3.32E-52 | -1.69E-46 |
| MS.gene060005 | MS.gene58160 | 0.812443 | 4.23E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene58160 | 0.807193 | 5.70E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene58160 | 0.851971 | 6.27E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene58160 | 0.815027 | 1.14E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene58160 | 0.865766 | 4.65E-65 | -1.69E-46 |
| MS.gene060495 | MS.gene58160 | 0.810942 | 8.97E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene58160 | 0.828726 | 7.66E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene58160 | 0.857276 | 1.82E-62 | -1.69E-46 |
| MS.gene06090 | MS.gene58160 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene58160 | 0.826482 | 2.65E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene58160 | 0.906925 | 8.81E-81 | -1.69E-46 |
| MS.gene061051 | MS.gene58160 | -0.865682 | 4.95E-65 | -1.69E-46 |
| MS.gene061112 | MS.gene58160 | 0.821033 | 5.01E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene58160 | 0.822806 | 1.95E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene58160 | 0.834882 | 2.32E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene58160 | 0.821325 | 4.29E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58160.t1 | MTR_8g092050 | 97.845 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58160.t1 | AT2G21860 | 69.214 | 458 | 122 | 3 | 3 | 456 | 69 | 511 | 0.0 | 682 |
Find 103 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATTTGGATCATTAATT+TGG | 0.084716 | 4.2:+10110791 | None:intergenic |
| ATTCACACATTCATCCAATT+TGG | 0.214697 | 4.2:+10110778 | None:intergenic |
| CACTATTTCATATGAGTCTT+TGG | 0.227130 | 4.2:+10111758 | None:intergenic |
| CTAGATTTGAAGAACAAATT+AGG | 0.233092 | 4.2:-10111855 | MS.gene58160:CDS |
| TTGGTATGAACCGGTGTTTC+AGG | 0.234337 | 4.2:-10111196 | MS.gene58160:CDS |
| GAAGTAAAGGGAAGCATATT+TGG | 0.240241 | 4.2:-10111813 | MS.gene58160:CDS |
| CCCTCTCAACTCTGCTTCTT+GGG | 0.260895 | 4.2:-10113502 | MS.gene58160:CDS |
| GCCCTCTCAACTCTGCTTCT+TGG | 0.274661 | 4.2:-10113503 | MS.gene58160:CDS |
| TATTTCAGTGTATTAGATAA+TGG | 0.312534 | 4.2:-10111096 | MS.gene58160:CDS |
| TCATGCATTGATCCTCCATT+AGG | 0.313626 | 4.2:-10110847 | MS.gene58160:CDS |
| CAAACGAAGAGTCGGTTAAC+TGG | 0.314699 | 4.2:-10111929 | MS.gene58160:CDS |
| TCCAAATTAATGATCCAAAT+TGG | 0.322012 | 4.2:-10110792 | MS.gene58160:CDS |
| TTCGTCCTCTCTCTTTCATT+TGG | 0.322166 | 4.2:+10110934 | None:intergenic |
| TGGAGCTGGCGCGTTGTAGC+GGG | 0.328165 | 4.2:-10111291 | MS.gene58160:CDS |
| GAGTTATTTCAAATGAGTTT+TGG | 0.328583 | 4.2:-10111074 | MS.gene58160:CDS |
| GCTGCAGGGCAGTCTTATAC+TGG | 0.330058 | 4.2:-10110988 | MS.gene58160:CDS |
| TACTAATCAATGCTTATATA+AGG | 0.337300 | 4.2:-10111674 | MS.gene58160:CDS |
| TTCATACGAAAGTGCGAATC+TGG | 0.340979 | 4.2:-10111475 | MS.gene58160:CDS |
| TTCTCCTCCTCCATACCATT+TGG | 0.346423 | 4.2:+10111157 | None:intergenic |
| CATGCATTGATCCTCCATTA+GGG | 0.358125 | 4.2:-10110846 | MS.gene58160:CDS |
| TCAACCATTGGAGGCACATA+TGG | 0.360449 | 4.2:+10111384 | None:intergenic |
| TATGGAGGAGGAGAAAATAT+AGG | 0.367865 | 4.2:-10111149 | MS.gene58160:CDS |
| TCATTTGGATATGCTCCATC+TGG | 0.369299 | 4.2:+10110949 | None:intergenic |
| GACGCAGTTCTGACGATATA+CGG | 0.372251 | 4.2:-10111710 | MS.gene58160:CDS |
| GTTAAGAGAGGTAAGGTATA+TGG | 0.378832 | 4.2:-10111126 | MS.gene58160:CDS |
| TGGGGTTTGTTCCACTATCA+TGG | 0.398219 | 4.2:-10111021 | MS.gene58160:CDS |
| ATGGAGGAGGAGAAAATATA+GGG | 0.404522 | 4.2:-10111148 | MS.gene58160:CDS |
| TGTAGCTAATGACCTTAGTT+GGG | 0.414877 | 4.2:-10111040 | MS.gene58160:CDS |
| TAATTACATACTTGATCAAC+AGG | 0.415438 | 4.2:+10111510 | None:intergenic |
| TTGTTTGTTGGTTGGTTAGA+GGG | 0.419948 | 4.2:-10111321 | MS.gene58160:CDS |
| TCAGGTACTTAATTGCTTGT+TGG | 0.420248 | 4.2:-10111577 | MS.gene58160:CDS |
| TTCTATAGAGGAAAAGCAAA+AGG | 0.423876 | 4.2:-10111225 | MS.gene58160:CDS |
| ATTGCAGAAGATTTGTTTGT+TGG | 0.430954 | 4.2:-10111333 | MS.gene58160:CDS |
| GTTGAAGAACTGCGGTCGTC+AGG | 0.432171 | 4.2:-10111595 | MS.gene58160:CDS |
| TTTGTTTGTTGGTTGGTTAG+AGG | 0.433258 | 4.2:-10111322 | MS.gene58160:CDS |
| GAGATTCACAATGAAGTAAA+GGG | 0.435424 | 4.2:-10111825 | MS.gene58160:CDS |
| GAACCCTCTGGAGTCCCTAA+TGG | 0.441951 | 4.2:+10110832 | None:intergenic |
| ATGGAGCTGGCGCGTTGTAG+CGG | 0.444125 | 4.2:-10111292 | MS.gene58160:CDS |
| ATGTAGCTAATGACCTTAGT+TGG | 0.456001 | 4.2:-10111041 | MS.gene58160:CDS |
| CATGGAGCTGCTAAAGCTGC+AGG | 0.462494 | 4.2:-10111003 | MS.gene58160:CDS |
| CAGCCTTCAGTAATTCTCTC+TGG | 0.462625 | 4.2:+10111976 | None:intergenic |
| CCTCCAATGGTTGAATTTCG+CGG | 0.464187 | 4.2:-10111375 | MS.gene58160:CDS |
| CTTTAGCAGCTCCATGATAG+TGG | 0.464240 | 4.2:+10111010 | None:intergenic |
| TGAGATTCACAATGAAGTAA+AGG | 0.466183 | 4.2:-10111826 | MS.gene58160:CDS |
| TGCCCGCGAAATTCAACCAT+TGG | 0.472472 | 4.2:+10111372 | None:intergenic |
| CTGTAACACGCAAAGCGAAA+AGG | 0.472645 | 4.2:+10111449 | None:intergenic |
| CTCCAATGGTTGAATTTCGC+GGG | 0.485968 | 4.2:-10111374 | MS.gene58160:CDS |
| CTGCAGGGCAGTCTTATACT+GGG | 0.487163 | 4.2:-10110987 | MS.gene58160:CDS |
| GAATGAAAACTTGAACCCTC+TGG | 0.494780 | 4.2:+10110820 | None:intergenic |
| GGAGGCACATATGGCTTGGT+AGG | 0.497651 | 4.2:+10111393 | None:intergenic |
| CATTTGAAGGCCAAATGGTA+TGG | 0.506239 | 4.2:-10111167 | MS.gene58160:CDS |
| CCCAAGAAGCAGAGTTGAGA+GGG | 0.506484 | 4.2:+10113502 | None:intergenic |
| AGAAATGTGAAATCAAAGAG+TGG | 0.510895 | 4.2:-10110894 | MS.gene58160:CDS |
| GCAGTACTTGTTAGTCCAGA+TGG | 0.511090 | 4.2:-10110964 | MS.gene58160:CDS |
| CAGAAGATTTGTTTGTTGGT+TGG | 0.512517 | 4.2:-10111329 | MS.gene58160:CDS |
| CAAGGGAATTGATCATATGC+TGG | 0.512768 | 4.2:+10111261 | None:intergenic |
| AGATTGAAATGGGTTGATGA+AGG | 0.515244 | 4.2:-10112050 | MS.gene58160:CDS |
| TAGAGGGTTTGCAATGGAGC+TGG | 0.515365 | 4.2:-10111305 | MS.gene58160:CDS |
| CAATATCAGCTATTCTATAG+AGG | 0.515759 | 4.2:-10111237 | MS.gene58160:CDS |
| CAGAGAGAATTACTGAAGGC+TGG | 0.524861 | 4.2:-10111975 | MS.gene58160:CDS |
| TGCAAACTGTAACCGAAGCA+TGG | 0.534436 | 4.2:-10111737 | MS.gene58160:CDS |
| AGTGGAACAAACCCCAACTA+AGG | 0.536966 | 4.2:+10111028 | None:intergenic |
| TTCAGTAATTCTCTCTGGAG+TGG | 0.537115 | 4.2:+10111981 | None:intergenic |
| AGAAAATATAGGGTTAAGAG+AGG | 0.541135 | 4.2:-10111138 | MS.gene58160:CDS |
| GTGAGGATGGTGGCTATAGT+TGG | 0.542421 | 4.2:-10113540 | MS.gene58160:CDS |
| TTTCGTATGAAGCGATGCAT+CGG | 0.549436 | 4.2:+10111487 | None:intergenic |
| CATTGGAGGCACATATGGCT+TGG | 0.559033 | 4.2:+10111389 | None:intergenic |
| ATATAGGGTTAAGAGAGGTA+AGG | 0.560870 | 4.2:-10111133 | MS.gene58160:CDS |
| TCTATAGAGGAAAAGCAAAA+GGG | 0.562818 | 4.2:-10111224 | MS.gene58160:CDS |
| GTTGGTTAGAGGGTTTGCAA+TGG | 0.562900 | 4.2:-10111311 | MS.gene58160:CDS |
| GATTGAAATGGGTTGATGAA+GGG | 0.563961 | 4.2:-10112049 | MS.gene58160:CDS |
| GTAGCTAATGACCTTAGTTG+GGG | 0.568269 | 4.2:-10111039 | MS.gene58160:CDS |
| GGATGAGCCTCCGGTGAGGA+TGG | 0.570432 | 4.2:-10113553 | MS.gene58160:CDS |
| TGCAGGGCAGTCTTATACTG+GGG | 0.572559 | 4.2:-10110986 | MS.gene58160:CDS |
| ACTGCGTCGATCCCATGCTT+CGG | 0.573705 | 4.2:+10111725 | None:intergenic |
| GGAGCTGGCGCGTTGTAGCG+GGG | 0.580346 | 4.2:-10111290 | MS.gene58160:CDS |
| GAAATGTGAAATCAAAGAGT+GGG | 0.580566 | 4.2:-10110893 | MS.gene58160:CDS |
| TGTGACGATGGATGAGCCTC+CGG | 0.581185 | 4.2:-10113562 | None:intergenic |
| ATGGTGGCTATAGTTGGCCA+TGG | 0.581673 | 4.2:-10113534 | MS.gene58160:CDS |
| CGCTGTTACAAACGAAGAGT+CGG | 0.585099 | 4.2:-10111937 | MS.gene58160:CDS |
| CAAGCCATATGTGCCTCCAA+TGG | 0.586466 | 4.2:-10111388 | MS.gene58160:CDS |
| CCGCGAAATTCAACCATTGG+AGG | 0.586866 | 4.2:+10111375 | None:intergenic |
| GCAAACTGTAACCGAAGCAT+GGG | 0.587392 | 4.2:-10111736 | MS.gene58160:CDS |
| ATGGAGCTGCTAAAGCTGCA+GGG | 0.587852 | 4.2:-10111002 | MS.gene58160:CDS |
| AAGGCCAAATGGTATGGAGG+AGG | 0.599053 | 4.2:-10111161 | MS.gene58160:CDS |
| ACTATAGCCACCATCCTCAC+CGG | 0.601762 | 4.2:+10113543 | None:intergenic |
| GAGGCACATATGGCTTGGTA+GGG | 0.605048 | 4.2:+10111394 | None:intergenic |
| TCCCAAGAAGCAGAGTTGAG+AGG | 0.610361 | 4.2:+10113501 | None:intergenic |
| AACTGTATGTTGAAGAACTG+CGG | 0.613073 | 4.2:-10111603 | MS.gene58160:CDS |
| TGAGAGGGCTGACAGCTCCA+TGG | 0.617554 | 4.2:+10113517 | None:intergenic |
| GATTTGAAGAACAAATTAGG+AGG | 0.621101 | 4.2:-10111852 | MS.gene58160:CDS |
| CCCTCTGGAGTCCCTAATGG+AGG | 0.622618 | 4.2:+10110835 | None:intergenic |
| TGAGCCTCCGGTGAGGATGG+TGG | 0.634453 | 4.2:-10113550 | MS.gene58160:CDS |
| ATTAGATTGAATGCACTCGT+CGG | 0.634851 | 4.2:+10112007 | None:intergenic |
| TTGAAGGCCAAATGGTATGG+AGG | 0.635847 | 4.2:-10111164 | MS.gene58160:CDS |
| CATATCCAAATGAAAGAGAG+AGG | 0.645957 | 4.2:-10110939 | MS.gene58160:CDS |
| AGAATAGCTGATATTGACAA+GGG | 0.651578 | 4.2:+10111244 | None:intergenic |
| CCTCCATTAGGGACTCCAGA+GGG | 0.662863 | 4.2:-10110835 | MS.gene58160:CDS |
| TAGAATAGCTGATATTGACA+AGG | 0.664980 | 4.2:+10111243 | None:intergenic |
| TCCTCCATTAGGGACTCCAG+AGG | 0.675079 | 4.2:-10110836 | MS.gene58160:CDS |
| CGATGGATGAGCCTCCGGTG+AGG | 0.688939 | 4.2:-10113557 | MS.gene58160:CDS |
| ACTCCAGAGAGAATTACTGA+AGG | 0.689331 | 4.2:-10111979 | MS.gene58160:CDS |
| ATAGCCACCATCCTCACCGG+AGG | 0.702930 | 4.2:+10113546 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAAAGAAATATGT+GGG | + | chr4.2:10111787-10111806 | None:intergenic | 10.0% |
| !! | ATTTCAATATAAAAATAGCT+TGG | + | chr4.2:10110985-10111004 | None:intergenic | 15.0% |
| !! | GATTAAATAAAAGAAATATG+TGG | + | chr4.2:10111788-10111807 | None:intergenic | 15.0% |
| !! | TTATATCCTTATATAAAAAC+AGG | + | chr4.2:10110928-10110947 | None:intergenic | 15.0% |
| !! | TTATGATATAGTAGTTAATT+AGG | + | chr4.2:10111740-10111759 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTCTTTATTTAT+AGG | - | chr4.2:10111679-10111698 | MS.gene58160:CDS | 15.0% |
| !!! | TTATTTTATTTATCCAAACA+GGG | + | chr4.2:10111058-10111077 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTTATCCAAAC+AGG | + | chr4.2:10111059-10111078 | None:intergenic | 15.0% |
| !! | AAGCATATTTGGAAAAATAT+TGG | - | chr4.2:10112533-10112552 | MS.gene58160:intron | 20.0% |
| !! | ACAACTTATATGAAAACATT+TGG | + | chr4.2:10111084-10111103 | None:intergenic | 20.0% |
| !! | ACTCAATAAAGTTATACATA+AGG | - | chr4.2:10111250-10111269 | MS.gene58160:CDS | 20.0% |
| !! | AGCATATTTGGAAAAATATT+GGG | - | chr4.2:10112534-10112553 | MS.gene58160:intron | 20.0% |
| !! | ATATAGTAGTTAATTAGGTT+GGG | + | chr4.2:10111735-10111754 | None:intergenic | 20.0% |
| !! | GTATAACTTTATTGAGTTTA+CGG | + | chr4.2:10111247-10111266 | None:intergenic | 20.0% |
| !! | TACTAATCAATGCTTATATA+AGG | - | chr4.2:10112661-10112680 | MS.gene58160:intron | 20.0% |
| !! | TATAACTTTATTGAGTTTAC+GGG | + | chr4.2:10111246-10111265 | None:intergenic | 20.0% |
| !! | TATTTCAGTGTATTAGATAA+TGG | - | chr4.2:10113239-10113258 | MS.gene58160:intron | 20.0% |
| !!! | CTATAACCTGTTTTTATATA+AGG | - | chr4.2:10110919-10110938 | MS.gene58160:CDS | 20.0% |
| !!! | TTATTTCTTTCAAATTTGCT+TGG | - | chr4.2:10111844-10111863 | MS.gene58160:CDS | 20.0% |
| !!! | TTGACTATTTTCTTACTTAT+GGG | - | chr4.2:10111961-10111980 | MS.gene58160:CDS | 20.0% |
| !!! | TTTGACTATTTTCTTACTTA+TGG | - | chr4.2:10111960-10111979 | MS.gene58160:CDS | 20.0% |
| ! | AAGATGTTTATTAACGTAGA+AGG | - | chr4.2:10111657-10111676 | MS.gene58160:CDS | 25.0% |
| ! | ACATGAAACTCATTTGAATT+TGG | + | chr4.2:10111280-10111299 | None:intergenic | 25.0% |
| ! | AGTTAATTCTCAAATCTTTG+AGG | + | chr4.2:10111571-10111590 | None:intergenic | 25.0% |
| ! | ATTTAATGTTCCCTTTAATC+AGG | - | chr4.2:10112257-10112276 | MS.gene58160:intron | 25.0% |
| ! | CTAGATTTGAAGAACAAATT+AGG | - | chr4.2:10112480-10112499 | MS.gene58160:intron | 25.0% |
| ! | GAAAAATAATTGTCTTGAGT+TGG | - | chr4.2:10112908-10112927 | MS.gene58160:intron | 25.0% |
| ! | GATATAGTAGTTAATTAGGT+TGG | + | chr4.2:10111736-10111755 | None:intergenic | 25.0% |
| ! | GCATATTTGGAAAAATATTG+GGG | - | chr4.2:10112535-10112554 | MS.gene58160:intron | 25.0% |
| ! | GTTGTAAAGCTATCATTTAA+AGG | - | chr4.2:10112114-10112133 | MS.gene58160:intron | 25.0% |
| ! | TAATTACATACTTGATCAAC+AGG | + | chr4.2:10112828-10112847 | None:intergenic | 25.0% |
| ! | TCCAAATTAATGATCCAAAT+TGG | - | chr4.2:10113543-10113562 | MS.gene58160:CDS | 25.0% |
| ! | TCCAATTTGGATCATTAATT+TGG | + | chr4.2:10113547-10113566 | None:intergenic | 25.0% |
| ! | TCTACGTTAATAAACATCTT+TGG | + | chr4.2:10111657-10111676 | None:intergenic | 25.0% |
| ! | TGATTAAAGGGAACATTAAA+TGG | + | chr4.2:10112258-10112277 | None:intergenic | 25.0% |
| ! | TTACATACTTTAGCAAATCA+TGG | - | chr4.2:10111456-10111475 | MS.gene58160:CDS | 25.0% |
| !! | AAATTTATTGTAGTTTGTGG+TGG | - | chr4.2:10111361-10111380 | MS.gene58160:CDS | 25.0% |
| !! | AATCTTTTTGCCTGATTAAA+GGG | + | chr4.2:10112270-10112289 | None:intergenic | 25.0% |
| !! | TTTCAGGTAAAAACATTTGA+AGG | - | chr4.2:10113155-10113174 | MS.gene58160:intron | 25.0% |
| !!! | AACAAGTTGAAATTAGCTTT+TGG | + | chr4.2:10112097-10112116 | None:intergenic | 25.0% |
| !!! | AATGATTTTACTGGCTAAAA+CGG | + | chr4.2:10111763-10111782 | None:intergenic | 25.0% |
| !!! | GAGTTATTTCAAATGAGTTT+TGG | - | chr4.2:10113261-10113280 | MS.gene58160:intron | 25.0% |
| !!! | TTTAAGTTCTAAAGTGCTAA+TGG | - | chr4.2:10112034-10112053 | MS.gene58160:CDS | 25.0% |
| AAAAACATTTGAAGGCCAAA+TGG | - | chr4.2:10113163-10113182 | MS.gene58160:intron | 30.0% | |
| AACATATGCATATAGTGAGA+TGG | - | chr4.2:10111337-10111356 | MS.gene58160:CDS | 30.0% | |
| ACATATGCATATAGTGAGAT+GGG | - | chr4.2:10111338-10111357 | MS.gene58160:CDS | 30.0% | |
| AGAAAATATAGGGTTAAGAG+AGG | - | chr4.2:10113197-10113216 | MS.gene58160:intron | 30.0% | |
| AGAAATGTGAAATCAAAGAG+TGG | - | chr4.2:10113441-10113460 | MS.gene58160:intron | 30.0% | |
| AGAATAGCTGATATTGACAA+GGG | + | chr4.2:10113094-10113113 | None:intergenic | 30.0% | |
| ATCAGGCAAAAAGATTGAAA+TGG | - | chr4.2:10112274-10112293 | MS.gene58160:intron | 30.0% | |
| ATTGAAAAACTTGAGAGCAA+AGG | - | chr4.2:10112695-10112714 | MS.gene58160:intron | 30.0% | |
| ATTGAGAAGCTTATCCAAAA+AGG | - | chr4.2:10112191-10112210 | MS.gene58160:intron | 30.0% | |
| CAATATCAGCTATTCTATAG+AGG | - | chr4.2:10113098-10113117 | MS.gene58160:intron | 30.0% | |
| CACTATTTCATATGAGTCTT+TGG | + | chr4.2:10112580-10112599 | None:intergenic | 30.0% | |
| GAAATGTGAAATCAAAGAGT+GGG | - | chr4.2:10113442-10113461 | MS.gene58160:intron | 30.0% | |
| GAAGGCAATAATATAATGTG+CGG | - | chr4.2:10111394-10111413 | MS.gene58160:CDS | 30.0% | |
| GAGATTCACAATGAAGTAAA+GGG | - | chr4.2:10112510-10112529 | MS.gene58160:intron | 30.0% | |
| GATTTGAAGAACAAATTAGG+AGG | - | chr4.2:10112483-10112502 | MS.gene58160:intron | 30.0% | |
| GGGAAATTTATTGTAGTTTG+TGG | - | chr4.2:10111358-10111377 | MS.gene58160:CDS | 30.0% | |
| TAGAATAGCTGATATTGACA+AGG | + | chr4.2:10113095-10113114 | None:intergenic | 30.0% | |
| TCAGGCAAAAAGATTGAAAT+GGG | - | chr4.2:10112275-10112294 | MS.gene58160:intron | 30.0% | |
| TCCAAAAAGGTTCATACTAA+CGG | - | chr4.2:10112204-10112223 | MS.gene58160:intron | 30.0% | |
| TCTATAGAGGAAAAGCAAAA+GGG | - | chr4.2:10113111-10113130 | MS.gene58160:intron | 30.0% | |
| TGAGATTCACAATGAAGTAA+AGG | - | chr4.2:10112509-10112528 | MS.gene58160:intron | 30.0% | |
| TTCTATAGAGGAAAAGCAAA+AGG | - | chr4.2:10113110-10113129 | MS.gene58160:intron | 30.0% | |
| TTGAAAAACTTGAGAGCAAA+GGG | - | chr4.2:10112696-10112715 | MS.gene58160:intron | 30.0% | |
| TTGGAATAGCATGATTCATA+AGG | - | chr4.2:10111485-10111504 | MS.gene58160:CDS | 30.0% | |
| ! | ATTGCAGAAGATTTGTTTGT+TGG | - | chr4.2:10113002-10113021 | MS.gene58160:intron | 30.0% |
| ! | CAATCTTTTTGCCTGATTAA+AGG | + | chr4.2:10112271-10112290 | None:intergenic | 30.0% |
| ! | TATGTGGGTAATGATTTTAC+TGG | + | chr4.2:10111772-10111791 | None:intergenic | 30.0% |
| ! | TGAAGAGCTTTTCTACAATT+AGG | + | chr4.2:10112786-10112805 | None:intergenic | 30.0% |
| !! | AAGTTTTTCAATACTGGAAC+TGG | + | chr4.2:10112687-10112706 | None:intergenic | 30.0% |
| !! | AATGTTTTTACCTGAAACAC+CGG | + | chr4.2:10113152-10113171 | None:intergenic | 30.0% |
| !! | GTCATAATAGTTTTGCTAGA+GGG | - | chr4.2:10111932-10111951 | MS.gene58160:CDS | 30.0% |
| !! | TGTCATAATAGTTTTGCTAG+AGG | - | chr4.2:10111931-10111950 | MS.gene58160:CDS | 30.0% |
| !!! | AAATGAGTTTTGGACAATTG+TGG | - | chr4.2:10113271-10113290 | MS.gene58160:intron | 30.0% |
| !!! | GTCTTTGGTTTTATCTAACT+CGG | + | chr4.2:10112565-10112584 | None:intergenic | 30.0% |
| AAAATCCAAAGACATGTTGC+AGG | + | chr4.2:10111628-10111647 | None:intergenic | 35.0% | |
| AACTGTATGTTGAAGAACTG+CGG | - | chr4.2:10112732-10112751 | MS.gene58160:intron | 35.0% | |
| AGTCAGCTGAAAACAACTTA+TGG | - | chr4.2:10111144-10111163 | MS.gene58160:CDS | 35.0% | |
| ATATAGGGTTAAGAGAGGTA+AGG | - | chr4.2:10113202-10113221 | MS.gene58160:intron | 35.0% | |
| ATGGAGGAGGAGAAAATATA+GGG | - | chr4.2:10113187-10113206 | MS.gene58160:intron | 35.0% | |
| ATGTAGCTAATGACCTTAGT+TGG | - | chr4.2:10113294-10113313 | MS.gene58160:intron | 35.0% | |
| ATTAGATTGAATGCACTCGT+CGG | + | chr4.2:10112331-10112350 | None:intergenic | 35.0% | |
| CATATCCAAATGAAAGAGAG+AGG | - | chr4.2:10113396-10113415 | MS.gene58160:intron | 35.0% | |
| CATGATTCATAAGGAAACAC+AGG | - | chr4.2:10111494-10111513 | MS.gene58160:CDS | 35.0% | |
| GCGGATATAACAGTAAAATC+TGG | - | chr4.2:10111413-10111432 | MS.gene58160:CDS | 35.0% | |
| GTTAAGAGAGGTAAGGTATA+TGG | - | chr4.2:10113209-10113228 | MS.gene58160:intron | 35.0% | |
| TATGGAGGAGGAGAAAATAT+AGG | - | chr4.2:10113186-10113205 | MS.gene58160:intron | 35.0% | |
| TCAGGTACTTAATTGCTTGT+TGG | - | chr4.2:10112758-10112777 | MS.gene58160:intron | 35.0% | |
| TGTAGCTAATGACCTTAGTT+GGG | - | chr4.2:10113295-10113314 | MS.gene58160:intron | 35.0% | |
| ! | CAGAAGATTTGTTTGTTGGT+TGG | - | chr4.2:10113006-10113025 | MS.gene58160:intron | 35.0% |
| ! | GAAAAGCAAAAGGGTCTTTT+TGG | - | chr4.2:10113120-10113139 | MS.gene58160:intron | 35.0% |
| ! | GAAGTAAAGGGAAGCATATT+TGG | - | chr4.2:10112522-10112541 | MS.gene58160:intron | 35.0% |
| ! | TAGCAAATCATGGATTGTGT+TGG | - | chr4.2:10111466-10111485 | MS.gene58160:CDS | 35.0% |
| ! | TCCGTTAGTATGAACCTTTT+TGG | + | chr4.2:10112208-10112227 | None:intergenic | 35.0% |
| ! | TTGAGTTTACGGGTATGTTT+TGG | + | chr4.2:10111236-10111255 | None:intergenic | 35.0% |
| ! | TTGTTTGTTGGTTGGTTAGA+GGG | - | chr4.2:10113014-10113033 | MS.gene58160:intron | 35.0% |
| ! | TTTGTTTGTTGGTTGGTTAG+AGG | - | chr4.2:10113013-10113032 | MS.gene58160:intron | 35.0% |
| !! | AGATTGAAATGGGTTGATGA+AGG | - | chr4.2:10112285-10112304 | MS.gene58160:intron | 35.0% |
| !! | GATTGAAATGGGTTGATGAA+GGG | - | chr4.2:10112286-10112305 | MS.gene58160:intron | 35.0% |
| !! | GCTCTCAAGTTTTTCAATAC+TGG | + | chr4.2:10112693-10112712 | None:intergenic | 35.0% |
| !! | GTAATCCAAGAGTGCTATTT+AGG | - | chr4.2:10111309-10111328 | MS.gene58160:CDS | 35.0% |
| ACTCCAGAGAGAATTACTGA+AGG | - | chr4.2:10112356-10112375 | MS.gene58160:intron | 40.0% | |
| ACTCTCCTAAATAGCACTCT+TGG | + | chr4.2:10111317-10111336 | None:intergenic | 40.0% | |
| CAAGGGAATTGATCATATGC+TGG | + | chr4.2:10113077-10113096 | None:intergenic | 40.0% | |
| CATTTGAAGGCCAAATGGTA+TGG | - | chr4.2:10113168-10113187 | MS.gene58160:intron | 40.0% | |
| GAATGAAAACTTGAACCCTC+TGG | + | chr4.2:10113518-10113537 | None:intergenic | 40.0% | |
| GTAGCTAATGACCTTAGTTG+GGG | - | chr4.2:10113296-10113315 | MS.gene58160:intron | 40.0% | |
| TCATTTGGATATGCTCCATC+TGG | + | chr4.2:10113389-10113408 | None:intergenic | 40.0% | |
| TCTATACTGTAGACCCTGTT+TGG | - | chr4.2:10111042-10111061 | MS.gene58160:CDS | 40.0% | |
| TTCGTCCTCTCTCTTTCATT+TGG | + | chr4.2:10113404-10113423 | None:intergenic | 40.0% | |
| TTTCGTATGAAGCGATGCAT+CGG | + | chr4.2:10112851-10112870 | None:intergenic | 40.0% | |
| ! | CATGCATTGATCCTCCATTA+GGG | - | chr4.2:10113489-10113508 | MS.gene58160:CDS | 40.0% |
| ! | TCATGCATTGATCCTCCATT+AGG | - | chr4.2:10113488-10113507 | MS.gene58160:CDS | 40.0% |
| ! | TTCAGTAATTCTCTCTGGAG+TGG | + | chr4.2:10112357-10112376 | None:intergenic | 40.0% |
| ! | TTCATACGAAAGTGCGAATC+TGG | - | chr4.2:10112860-10112879 | MS.gene58160:intron | 40.0% |
| !! | AGGGTCTTTTTGGTATGAAC+CGG | - | chr4.2:10113130-10113149 | MS.gene58160:intron | 40.0% |
| AGTGGAACAAACCCCAACTA+AGG | + | chr4.2:10113310-10113329 | None:intergenic | 45.0% | |
| CAAACGAAGAGTCGGTTAAC+TGG | - | chr4.2:10112406-10112425 | MS.gene58160:intron | 45.0% | |
| CAGAGAGAATTACTGAAGGC+TGG | - | chr4.2:10112360-10112379 | MS.gene58160:intron | 45.0% | |
| CAGCCTTCAGTAATTCTCTC+TGG | + | chr4.2:10112362-10112381 | None:intergenic | 45.0% | |
| CCTCCAATGGTTGAATTTCG+CGG | - | chr4.2:10112960-10112979 | MS.gene58160:intron | 45.0% | |
| CGCTGTTACAAACGAAGAGT+CGG | - | chr4.2:10112398-10112417 | MS.gene58160:intron | 45.0% | |
| CTCCAATGGTTGAATTTCGC+GGG | - | chr4.2:10112961-10112980 | MS.gene58160:intron | 45.0% | |
| CTGTAACACGCAAAGCGAAA+AGG | + | chr4.2:10112889-10112908 | None:intergenic | 45.0% | |
| CTTTAGCAGCTCCATGATAG+TGG | + | chr4.2:10113328-10113347 | None:intergenic | 45.0% | |
| GCAAACTGTAACCGAAGCAT+GGG | - | chr4.2:10112599-10112618 | MS.gene58160:intron | 45.0% | |
| GTTGGTTAGAGGGTTTGCAA+TGG | - | chr4.2:10113024-10113043 | MS.gene58160:intron | 45.0% | |
| TGCAAACTGTAACCGAAGCA+TGG | - | chr4.2:10112598-10112617 | MS.gene58160:intron | 45.0% | |
| TGCAACCTGCAACATGTCTT+TGG | - | chr4.2:10111620-10111639 | MS.gene58160:CDS | 45.0% | |
| TTCTCCTCCTCCATACCATT+TGG | + | chr4.2:10113181-10113200 | None:intergenic | 45.0% | |
| TTGAAGGCCAAATGGTATGG+AGG | - | chr4.2:10113171-10113190 | MS.gene58160:intron | 45.0% | |
| TTGGTATGAACCGGTGTTTC+AGG | - | chr4.2:10113139-10113158 | MS.gene58160:intron | 45.0% | |
| ! | AATTTGCTTGGACAGCATGC+AGG | - | chr4.2:10111856-10111875 | MS.gene58160:CDS | 45.0% |
| ! | GACGCAGTTCTGACGATATA+CGG | - | chr4.2:10112625-10112644 | MS.gene58160:intron | 45.0% |
| ! | GCAGTACTTGTTAGTCCAGA+TGG | - | chr4.2:10113371-10113390 | MS.gene58160:intron | 45.0% |
| ! | TCAACCATTGGAGGCACATA+TGG | + | chr4.2:10112954-10112973 | None:intergenic | 45.0% |
| ! | TGGGGTTTGTTCCACTATCA+TGG | - | chr4.2:10113314-10113333 | MS.gene58160:intron | 45.0% |
| ! | TGTGGTGGAGAAGAAAGAGA+AGG | - | chr4.2:10111376-10111395 | MS.gene58160:CDS | 45.0% |
| AAGGCCAAATGGTATGGAGG+AGG | - | chr4.2:10113174-10113193 | MS.gene58160:intron | 50.0% | |
| ACTATAGCCACCATCCTCAC+CGG | + | chr4.2:10110795-10110814 | None:intergenic | 50.0% | |
| ATGGAGCTGCTAAAGCTGCA+GGG | - | chr4.2:10113333-10113352 | MS.gene58160:intron | 50.0% | |
| ATGGTGGCTATAGTTGGCCA+TGG | - | chr4.2:10110801-10110820 | MS.gene58160:CDS | 50.0% | |
| CAAGCCATATGTGCCTCCAA+TGG | - | chr4.2:10112947-10112966 | MS.gene58160:intron | 50.0% | |
| CCCAAGAAGCAGAGTTGAGA+GGG | + | chr4.2:10110836-10110855 | None:intergenic | 50.0% | |
| CCCTCTCAACTCTGCTTCTT+GGG | - | chr4.2:10110833-10110852 | MS.gene58160:CDS | 50.0% | |
| CCGCGAAATTCAACCATTGG+AGG | + | chr4.2:10112963-10112982 | None:intergenic | 50.0% | |
| TAGAGGGTTTGCAATGGAGC+TGG | - | chr4.2:10113030-10113049 | MS.gene58160:intron | 50.0% | |
| TCCCAAGAAGCAGAGTTGAG+AGG | + | chr4.2:10110837-10110856 | None:intergenic | 50.0% | |
| TGCCCGCGAAATTCAACCAT+TGG | + | chr4.2:10112966-10112985 | None:intergenic | 50.0% | |
| ! | CATTGGAGGCACATATGGCT+TGG | + | chr4.2:10112949-10112968 | None:intergenic | 50.0% |
| ! | CTGCAGGGCAGTCTTATACT+GGG | - | chr4.2:10113348-10113367 | MS.gene58160:intron | 50.0% |
| ! | GTGAGGATGGTGGCTATAGT+TGG | - | chr4.2:10110795-10110814 | MS.gene58160:CDS | 50.0% |
| ! | TGCAGGGCAGTCTTATACTG+GGG | - | chr4.2:10113349-10113368 | MS.gene58160:intron | 50.0% |
| !! | GAGGCACATATGGCTTGGTA+GGG | + | chr4.2:10112944-10112963 | None:intergenic | 50.0% |
| CATGGAGCTGCTAAAGCTGC+AGG | - | chr4.2:10113332-10113351 | MS.gene58160:intron | 55.0% | |
| CCTCCATTAGGGACTCCAGA+GGG | - | chr4.2:10113500-10113519 | MS.gene58160:CDS | 55.0% | |
| GCCCTCTCAACTCTGCTTCT+TGG | - | chr4.2:10110832-10110851 | MS.gene58160:CDS | 55.0% | |
| GTTGAAGAACTGCGGTCGTC+AGG | - | chr4.2:10112740-10112759 | MS.gene58160:intron | 55.0% | |
| TCCTCCATTAGGGACTCCAG+AGG | - | chr4.2:10113499-10113518 | MS.gene58160:CDS | 55.0% | |
| ! | ACTGCGTCGATCCCATGCTT+CGG | + | chr4.2:10112613-10112632 | None:intergenic | 55.0% |
| ! | GCTGCAGGGCAGTCTTATAC+TGG | - | chr4.2:10113347-10113366 | MS.gene58160:intron | 55.0% |
| !! | GAACCCTCTGGAGTCCCTAA+TGG | + | chr4.2:10113506-10113525 | None:intergenic | 55.0% |
| !! | GGAGGCACATATGGCTTGGT+AGG | + | chr4.2:10112945-10112964 | None:intergenic | 55.0% |
| ATAGCCACCATCCTCACCGG+AGG | + | chr4.2:10110792-10110811 | None:intergenic | 60.0% | |
| ATGGAGCTGGCGCGTTGTAG+CGG | - | chr4.2:10113043-10113062 | MS.gene58160:intron | 60.0% | |
| TGAGAGGGCTGACAGCTCCA+TGG | + | chr4.2:10110821-10110840 | None:intergenic | 60.0% | |
| !! | CCCTCTGGAGTCCCTAATGG+AGG | + | chr4.2:10113503-10113522 | None:intergenic | 60.0% |
| GGATGAGCCTCCGGTGAGGA+TGG | - | chr4.2:10110782-10110801 | MS.gene58160:CDS | 65.0% | |
| TGAGCCTCCGGTGAGGATGG+TGG | - | chr4.2:10110785-10110804 | MS.gene58160:CDS | 65.0% | |
| TGGAGCTGGCGCGTTGTAGC+GGG | - | chr4.2:10113044-10113063 | MS.gene58160:intron | 65.0% | |
| GGAGCTGGCGCGTTGTAGCG+GGG | - | chr4.2:10113045-10113064 | MS.gene58160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10110780 | 10113577 | 10110780 | ID=MS.gene58160 |
| chr4.2 | mRNA | 10110780 | 10113577 | 10110780 | ID=MS.gene58160.t1;Parent=MS.gene58160 |
| chr4.2 | exon | 10113482 | 10113577 | 10113482 | ID=MS.gene58160.t1.exon1;Parent=MS.gene58160.t1 |
| chr4.2 | CDS | 10113482 | 10113577 | 10113482 | ID=cds.MS.gene58160.t1;Parent=MS.gene58160.t1 |
| chr4.2 | exon | 10110780 | 10112078 | 10110780 | ID=MS.gene58160.t1.exon2;Parent=MS.gene58160.t1 |
| chr4.2 | CDS | 10110780 | 10112078 | 10110780 | ID=cds.MS.gene58160.t1;Parent=MS.gene58160.t1 |
| Gene Sequence |
| Protein sequence |
