Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008076.01.T01 | KEH37349.1 | 83.333 | 150 | 25 | 0 | 1 | 150 | 233 | 382 | 3.94E-80 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008076.01.T01 | A0A072V5T3 | 83.333 | 150 | 25 | 0 | 1 | 150 | 233 | 382 | 1.88e-80 | 259 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0280008076.01.T01 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0280008076.01 | 0.811535 | 6.668845e-51 | 4.138768e-48 |
| MsG0080048463.01 | MsG0280008076.01 | 0.814712 | 1.339604e-51 | 9.055434e-49 |
| MsG0080048464.01 | MsG0280008076.01 | 0.823889 | 1.086012e-53 | 9.471478e-51 |
| MsG0080048874.01 | MsG0280008076.01 | 0.807257 | 5.521922e-50 | 3.061199e-47 |
| MsG0180000091.01 | MsG0280008076.01 | 0.800179 | 1.627130e-48 | 7.526548e-46 |
| MsG0180000470.01 | MsG0280008076.01 | 0.842044 | 3.288820e-58 | 4.924682e-55 |
| MsG0180000914.01 | MsG0280008076.01 | 0.818151 | 2.276024e-52 | 1.690251e-49 |
| MsG0180001892.01 | MsG0280008076.01 | 0.840397 | 8.910186e-58 | 1.267663e-54 |
| MsG0180002377.01 | MsG0280008076.01 | 0.811339 | 7.357284e-51 | 4.542067e-48 |
| MsG0180003403.01 | MsG0280008076.01 | 0.806152 | 9.450306e-50 | 5.092183e-47 |
| MsG0180003455.01 | MsG0280008076.01 | 0.802045 | 6.757836e-49 | 3.277343e-46 |
| MsG0180004249.01 | MsG0280008076.01 | 0.800665 | 1.295248e-48 | 6.065997e-46 |
| MsG0180004465.01 | MsG0280008076.01 | 0.810919 | 9.071337e-51 | 5.539213e-48 |
| MsG0180004500.01 | MsG0280008076.01 | 0.812891 | 3.373845e-51 | 2.170917e-48 |
| MsG0180004765.01 | MsG0280008076.01 | 0.802599 | 5.196676e-49 | 2.556093e-46 |
| MsG0180006017.01 | MsG0280008076.01 | 0.808586 | 2.879542e-50 | 1.652791e-47 |
| MsG0180006134.01 | MsG0280008076.01 | 0.818937 | 1.510069e-52 | 1.146193e-49 |
| MsG0280006299.01 | MsG0280008076.01 | 0.813845 | 2.082395e-51 | 1.374965e-48 |
| MsG0280006309.01 | MsG0280008076.01 | 0.806593 | 7.628294e-50 | 4.156723e-47 |
| MsG0280006405.01 | MsG0280008076.01 | 0.802798 | 4.728923e-49 | 2.337868e-46 |
| MsG0280006491.01 | MsG0280008076.01 | 0.822093 | 2.849015e-53 | 2.361112e-50 |
| MsG0280006601.01 | MsG0280008076.01 | 0.804923 | 1.711130e-49 | 8.934524e-47 |
| MsG0280006930.01 | MsG0280008076.01 | 0.828223 | 1.013187e-54 | 1.000799e-51 |
| MsG0280007118.01 | MsG0280008076.01 | 0.808801 | 2.590698e-50 | 1.495363e-47 |
| MsG0280007955.01 | MsG0280008076.01 | 0.857465 | 1.602153e-62 | 3.958092e-59 |
| MsG0280008076.01 | MsG0280008112.01 | 0.837839 | 4.101742e-57 | 5.394762e-54 |
| MsG0280008076.01 | MsG0280008113.01 | 0.808218 | 3.450626e-50 | 1.961663e-47 |
| MsG0280008076.01 | MsG0280008377.01 | 0.815229 | 1.028604e-51 | 7.050954e-49 |
| MsG0280008076.01 | MsG0280009421.01 | 0.827074 | 1.911979e-54 | 1.826356e-51 |
| MsG0280008076.01 | MsG0280010148.01 | 0.824890 | 6.315425e-54 | 5.667802e-51 |
| MsG0280008076.01 | MsG0280010182.01 | 0.801651 | 8.142770e-49 | 3.909565e-46 |
| MsG0280008076.01 | MsG0280010184.01 | 0.816180 | 6.315721e-52 | 4.443829e-49 |
| MsG0280008076.01 | MsG0280010349.01 | 0.811225 | 7.787576e-51 | 4.793538e-48 |
| MsG0280008076.01 | MsG0280010350.01 | 0.827792 | 1.286115e-54 | 1.254379e-51 |
| MsG0280008076.01 | MsG0280010366.01 | 0.811878 | 5.616107e-51 | 3.517045e-48 |
| MsG0280008076.01 | MsG0280010443.01 | 0.801030 | 1.091111e-48 | 5.157793e-46 |
| MsG0280008076.01 | MsG0280010517.01 | 0.843668 | 1.215968e-58 | 1.916448e-55 |
| MsG0280008076.01 | MsG0280010722.01 | 0.808521 | 2.973622e-50 | 1.703947e-47 |
| MsG0280008076.01 | MsG0280010736.01 | 0.809104 | 2.231425e-50 | 1.298525e-47 |
| MsG0280008076.01 | MsG0280010796.01 | 0.805983 | 1.025843e-49 | 5.503977e-47 |
| MsG0280008076.01 | MsG0280010807.01 | 0.817146 | 3.836238e-52 | 2.771496e-49 |
| MsG0280008076.01 | MsG0380011581.01 | 0.801327 | 9.488109e-49 | 4.518485e-46 |
| MsG0280008076.01 | MsG0380011617.01 | 0.809372 | 1.955049e-50 | 1.145879e-47 |
| MsG0280008076.01 | MsG0380012067.01 | 0.827270 | 1.716784e-54 | 1.649367e-51 |
| MsG0280008076.01 | MsG0380012330.01 | 0.800485 | 1.409562e-48 | 6.571167e-46 |
| MsG0280008076.01 | MsG0380012460.01 | 0.803617 | 3.200828e-49 | 1.615898e-46 |
| MsG0280008076.01 | MsG0380013183.01 | 0.803508 | 3.371743e-49 | 1.697486e-46 |
| MsG0280008076.01 | MsG0380014495.01 | 0.810487 | 1.125061e-50 | 6.790471e-48 |
| MsG0280008076.01 | MsG0380014537.01 | 0.809030 | 2.313886e-50 | 1.343807e-47 |
| MsG0280008076.01 | MsG0380014701.01 | 0.823877 | 1.093437e-53 | 9.532802e-51 |
| MsG0280008076.01 | MsG0380014948.01 | 0.840865 | 6.722662e-58 | 9.703745e-55 |
| MsG0280008076.01 | MsG0380015332.01 | 0.812127 | 4.956425e-51 | 3.125094e-48 |
| MsG0280008076.01 | MsG0380015440.01 | 0.804440 | 2.158333e-49 | 1.112861e-46 |
| MsG0280008076.01 | MsG0380015555.01 | 0.807643 | 4.571686e-50 | 2.559931e-47 |
| MsG0280008076.01 | MsG0380015720.01 | 0.800851 | 1.187090e-48 | 5.585861e-46 |
| MsG0280008076.01 | MsG0380016163.01 | 0.816506 | 5.339292e-52 | 3.790246e-49 |
| MsG0280008076.01 | MsG0380016285.01 | 0.820855 | 5.502223e-53 | 4.404533e-50 |
| MsG0280008076.01 | MsG0380016387.01 | 0.802567 | 5.277453e-49 | 2.593566e-46 |
| MsG0280008076.01 | MsG0380016694.01 | 0.809048 | 2.294384e-50 | 1.333115e-47 |
| MsG0280008076.01 | MsG0380017244.01 | 0.807640 | 4.580160e-50 | 2.564428e-47 |
| MsG0280008076.01 | MsG0380017293.01 | 0.808576 | 2.893528e-50 | 1.660411e-47 |
| MsG0280008076.01 | MsG0380017461.01 | 0.802783 | 4.763012e-49 | 2.353819e-46 |
| MsG0280008076.01 | MsG0380017498.01 | 0.802990 | 4.314861e-49 | 2.143480e-46 |
| MsG0280008076.01 | MsG0380017589.01 | 0.805856 | 1.090643e-49 | 5.832729e-47 |
| MsG0280008076.01 | MsG0480018183.01 | 0.817588 | 3.050635e-52 | 2.230725e-49 |
| MsG0280008076.01 | MsG0480018236.01 | 0.830889 | 2.277537e-55 | 2.431679e-52 |
| MsG0280008076.01 | MsG0480018465.01 | 0.813055 | 3.106476e-51 | 2.007563e-48 |
| MsG0280008076.01 | MsG0480018653.01 | 0.832208 | 1.077644e-55 | 1.196277e-52 |
| MsG0280008076.01 | MsG0480018778.01 | 0.808289 | 3.332975e-50 | 1.898299e-47 |
| MsG0280008076.01 | MsG0480018985.01 | 0.806407 | 8.352195e-50 | 4.529614e-47 |
| MsG0280008076.01 | MsG0480019206.01 | 0.820420 | 6.925979e-53 | 5.477667e-50 |
| MsG0280008076.01 | MsG0480019435.01 | 0.801465 | 8.889460e-49 | 4.248117e-46 |
| MsG0280008076.01 | MsG0480020832.01 | 0.805341 | 1.398797e-49 | 7.381933e-47 |
| MsG0280008076.01 | MsG0480020887.01 | 0.804989 | 1.657605e-49 | 8.669071e-47 |
| MsG0280008076.01 | MsG0480021056.01 | 0.818179 | 2.243909e-52 | 1.667696e-49 |
| MsG0280008076.01 | MsG0480021796.01 | 0.813508 | 2.471059e-51 | 1.616800e-48 |
| MsG0280008076.01 | MsG0480021870.01 | 0.804637 | 1.963582e-49 | 1.017610e-46 |
| MsG0280008076.01 | MsG0480021925.01 | 0.804892 | 1.737000e-49 | 9.062560e-47 |
| MsG0280008076.01 | MsG0480022068.01 | 0.826850 | 2.162808e-54 | 2.052370e-51 |
| MsG0280008076.01 | MsG0480022259.01 | 0.823656 | 1.231812e-53 | 1.067280e-50 |
| MsG0280008076.01 | MsG0480022262.01 | 0.821050 | 4.960265e-53 | 3.992594e-50 |
| MsG0280008076.01 | MsG0480022788.01 | 0.810692 | 1.015756e-50 | 6.164631e-48 |
| MsG0280008076.01 | MsG0480022985.01 | 0.800588 | 1.342939e-48 | 6.277035e-46 |
| MsG0280008076.01 | MsG0480023045.01 | 0.804573 | 2.024565e-49 | 1.047501e-46 |
| MsG0280008076.01 | MsG0480023172.01 | 0.810580 | 1.074280e-50 | 6.500067e-48 |
| MsG0280008076.01 | MsG0480023251.01 | 0.804941 | 1.696328e-49 | 8.861193e-47 |
| MsG0280008076.01 | MsG0480023354.01 | 0.807760 | 4.319221e-50 | 2.425919e-47 |
| MsG0280008076.01 | MsG0480023463.01 | 0.811579 | 6.523014e-51 | 4.052840e-48 |
| MsG0280008076.01 | MsG0480023488.01 | 0.819962 | 8.815638e-53 | 6.884197e-50 |
| MsG0280008076.01 | MsG0480023489.01 | 0.818056 | 2.392177e-52 | 1.771805e-49 |
| MsG0280008076.01 | MsG0580024038.01 | 0.815361 | 9.615584e-52 | 6.615511e-49 |
| MsG0280008076.01 | MsG0580024197.01 | 0.810934 | 9.003086e-51 | 5.499829e-48 |
| MsG0280008076.01 | MsG0580024790.01 | -0.804894 | 1.734891e-49 | 9.052096e-47 |
| MsG0280008076.01 | MsG0580025022.01 | 0.818690 | 1.718342e-52 | 1.295186e-49 |
| MsG0280008076.01 | MsG0580025332.01 | 0.817800 | 2.732425e-52 | 2.009804e-49 |
| MsG0280008076.01 | MsG0580025587.01 | 0.802687 | 4.983379e-49 | 2.456678e-46 |
| MsG0280008076.01 | MsG0580025816.01 | 0.804307 | 2.299960e-49 | 1.181888e-46 |
| MsG0280008076.01 | MsG0580025832.01 | 0.806289 | 8.842536e-50 | 4.781357e-47 |
| MsG0280008076.01 | MsG0580025987.01 | 0.821709 | 3.495777e-53 | 2.865828e-50 |
| MsG0280008076.01 | MsG0580026086.01 | 0.810041 | 1.403720e-50 | 8.374212e-48 |
| MsG0280008076.01 | MsG0580027650.01 | 0.803595 | 3.233989e-49 | 1.631805e-46 |
| MsG0280008076.01 | MsG0580027922.01 | 0.818104 | 2.332665e-52 | 1.730021e-49 |
| MsG0280008076.01 | MsG0580027925.01 | 0.803103 | 4.089233e-49 | 2.037234e-46 |
| MsG0280008076.01 | MsG0580027947.01 | 0.811515 | 6.735889e-51 | 4.178209e-48 |
| MsG0280008076.01 | MsG0580028517.01 | 0.808397 | 3.159702e-50 | 1.804763e-47 |
| MsG0280008076.01 | MsG0580029236.01 | 0.834495 | 2.899768e-56 | 3.447276e-53 |
| MsG0280008076.01 | MsG0580029622.01 | 0.807197 | 5.686144e-50 | 3.147301e-47 |
| MsG0280008076.01 | MsG0580029925.01 | 0.809686 | 1.673773e-50 | 9.892449e-48 |
| MsG0280008076.01 | MsG0680030447.01 | 0.810102 | 1.361756e-50 | 8.136802e-48 |
| MsG0280008076.01 | MsG0680030677.01 | 0.806350 | 8.586269e-50 | 4.649796e-47 |
| MsG0280008076.01 | MsG0680030880.01 | 0.813491 | 2.492158e-51 | 1.629894e-48 |
| MsG0280008076.01 | MsG0680030882.01 | 0.809014 | 2.332406e-50 | 1.353958e-47 |
| MsG0280008076.01 | MsG0680031561.01 | 0.800672 | 1.291414e-48 | 6.049017e-46 |
| MsG0280008076.01 | MsG0680031617.01 | 0.840953 | 6.373128e-58 | 9.223931e-55 |
| MsG0280008076.01 | MsG0680032157.01 | 0.812062 | 5.122435e-51 | 3.223822e-48 |
| MsG0280008076.01 | MsG0680032771.01 | 0.802345 | 5.862061e-49 | 2.864859e-46 |
| MsG0280008076.01 | MsG0680033465.01 | 0.802549 | 5.322457e-49 | 2.614551e-46 |
| MsG0280008076.01 | MsG0680033862.01 | 0.808939 | 2.420933e-50 | 1.402482e-47 |
| MsG0280008076.01 | MsG0680034230.01 | 0.813887 | 2.038148e-51 | 1.347342e-48 |
| MsG0280008076.01 | MsG0680034739.01 | 0.814946 | 1.188924e-51 | 8.087422e-49 |
| MsG0280008076.01 | MsG0780036080.01 | 0.809071 | 2.267492e-50 | 1.318358e-47 |
| MsG0280008076.01 | MsG0780036593.01 | 0.814990 | 1.162624e-51 | 7.918272e-49 |
| MsG0280008076.01 | MsG0780036602.01 | 0.801813 | 7.541517e-49 | 3.635966e-46 |
| MsG0280008076.01 | MsG0780037054.01 | 0.821191 | 4.604391e-53 | 3.720461e-50 |
| MsG0280008076.01 | MsG0780037141.01 | 0.803162 | 3.976291e-49 | 1.984080e-46 |
| MsG0280008076.01 | MsG0780037146.01 | 0.801333 | 9.459918e-49 | 4.505761e-46 |
| MsG0280008076.01 | MsG0780038377.01 | 0.815221 | 1.033290e-51 | 7.081228e-49 |
| MsG0280008076.01 | MsG0780038439.01 | 0.815925 | 7.201457e-52 | 5.031519e-49 |
| MsG0280008076.01 | MsG0780038691.01 | 0.800053 | 1.725875e-48 | 7.958048e-46 |
| MsG0280008076.01 | MsG0780038907.01 | 0.810640 | 1.042708e-50 | 6.319233e-48 |
| MsG0280008076.01 | MsG0780039139.01 | 0.825405 | 4.771860e-54 | 4.345432e-51 |
| MsG0280008076.01 | MsG0780039170.01 | 0.837646 | 4.597827e-57 | 6.011457e-54 |
| MsG0280008076.01 | MsG0780039178.01 | 0.818178 | 2.244861e-52 | 1.668359e-49 |
| MsG0280008076.01 | MsG0780039443.01 | 0.819758 | 9.818067e-53 | 7.623209e-50 |
| MsG0280008076.01 | MsG0780039522.01 | 0.801933 | 7.126870e-49 | 3.446422e-46 |
| MsG0280008076.01 | MsG0780039867.01 | -0.803834 | 2.885313e-49 | 1.464793e-46 |
| MsG0280008076.01 | MsG0780041387.01 | 0.809879 | 1.521194e-50 | 9.036351e-48 |
| MsG0280008076.01 | MsG0780041416.01 | 0.811127 | 8.176116e-51 | 5.019759e-48 |
| MsG0280008076.01 | MsG0780041699.01 | 0.809157 | 2.173982e-50 | 1.266897e-47 |
| MsG0280008076.01 | MsG0880041861.01 | 0.814998 | 1.157617e-51 | 7.885964e-49 |
| MsG0280008076.01 | MsG0880041863.01 | 0.829524 | 4.904562e-55 | 5.032285e-52 |
| MsG0280008076.01 | MsG0880041864.01 | 0.800824 | 1.202525e-48 | 5.654221e-46 |
| MsG0280008076.01 | MsG0880042521.01 | 0.811049 | 8.502792e-51 | 5.209746e-48 |
| MsG0280008076.01 | MsG0880043157.01 | 0.821541 | 3.821583e-53 | 3.118108e-50 |
| MsG0280008076.01 | MsG0880043937.01 | 0.822128 | 2.796301e-53 | 2.319846e-50 |
| MsG0280008076.01 | MsG0880043941.01 | 0.836215 | 1.066150e-56 | 1.334855e-53 |
| MsG0280008076.01 | MsG0880044323.01 | 0.809309 | 2.016532e-50 | 1.179887e-47 |
| MsG0280008076.01 | MsG0880045111.01 | 0.834924 | 2.261658e-56 | 2.723456e-53 |
| MsG0280008076.01 | MsG0880045362.01 | 0.801557 | 8.513562e-49 | 4.077910e-46 |
| MsG0280008076.01 | MsG0880045372.01 | 0.802939 | 4.421924e-49 | 2.193828e-46 |
| MsG0280008076.01 | MsG0880045736.01 | 0.811059 | 8.459041e-51 | 5.184313e-48 |
| MsG0280008076.01 | MsG0880045765.01 | 0.815743 | 7.905979e-52 | 5.496965e-49 |
| MsG0280008076.01 | MsG0880045992.01 | 0.800393 | 1.471901e-48 | 6.845861e-46 |
| MsG0280008076.01 | MsG0880046457.01 | 0.809472 | 1.860328e-50 | 1.093238e-47 |
| MsG0280008076.01 | MsG0880046724.01 | 0.804574 | 2.023282e-49 | 1.046878e-46 |
| MsG0280008076.01 | MsG0880047764.01 | 0.810049 | 1.398443e-50 | 8.344227e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008076.01.T01 | MTR_2g437960 | 83.333 | 150 | 25 | 0 | 1 | 150 | 233 | 382 | 4.77e-84 | 259 |
| MsG0280008076.01.T01 | MTR_2g437960 | 83.333 | 150 | 25 | 0 | 1 | 150 | 233 | 382 | 7.26e-84 | 259 |
| MsG0280008076.01.T01 | MTR_2g437170 | 79.333 | 150 | 31 | 0 | 1 | 150 | 237 | 386 | 6.38e-77 | 241 |
| MsG0280008076.01.T01 | MTR_2g437940 | 79.333 | 150 | 31 | 0 | 1 | 150 | 201 | 350 | 6.69e-77 | 239 |
| MsG0280008076.01.T01 | MTR_2g437150 | 78.667 | 150 | 32 | 0 | 1 | 150 | 237 | 386 | 2.37e-76 | 239 |
| MsG0280008076.01.T01 | MTR_2g438020 | 78.667 | 150 | 32 | 0 | 1 | 150 | 284 | 433 | 7.76e-74 | 235 |
| MsG0280008076.01.T01 | MTR_2g437120 | 78.000 | 150 | 32 | 1 | 1 | 150 | 231 | 379 | 4.61e-73 | 231 |
| MsG0280008076.01.T01 | MTR_2g437200 | 76.667 | 150 | 35 | 0 | 1 | 150 | 245 | 394 | 5.81e-73 | 230 |
| MsG0280008076.01.T01 | MTR_2g437180 | 76.000 | 150 | 34 | 1 | 1 | 150 | 229 | 376 | 1.20e-72 | 229 |
| MsG0280008076.01.T01 | MTR_2g437100 | 77.333 | 150 | 34 | 0 | 1 | 150 | 242 | 391 | 1.28e-72 | 229 |
| MsG0280008076.01.T01 | MTR_2g437990 | 74.000 | 150 | 39 | 0 | 1 | 150 | 229 | 378 | 1.40e-71 | 228 |
| MsG0280008076.01.T01 | MTR_2g437240 | 75.333 | 150 | 37 | 0 | 1 | 150 | 245 | 394 | 2.30e-71 | 226 |
| MsG0280008076.01.T01 | MTR_2g438010 | 72.667 | 150 | 41 | 0 | 1 | 150 | 250 | 399 | 2.41e-70 | 224 |
| MsG0280008076.01.T01 | MTR_2g076320 | 71.333 | 150 | 43 | 0 | 1 | 150 | 230 | 379 | 1.02e-69 | 222 |
| MsG0280008076.01.T01 | MTR_2g437130 | 71.333 | 150 | 43 | 0 | 1 | 150 | 218 | 367 | 1.81e-68 | 218 |
| MsG0280008076.01.T01 | MTR_2g437160 | 72.000 | 150 | 42 | 0 | 1 | 150 | 151 | 300 | 2.52e-68 | 216 |
| MsG0280008076.01.T01 | MTR_2g437160 | 72.000 | 150 | 42 | 0 | 1 | 150 | 242 | 391 | 2.17e-67 | 216 |
| MsG0280008076.01.T01 | MTR_2g437020 | 64.667 | 150 | 52 | 1 | 1 | 150 | 218 | 366 | 3.46e-57 | 189 |
| MsG0280008076.01.T01 | MTR_2g437090 | 58.667 | 150 | 62 | 0 | 1 | 150 | 5 | 154 | 4.25e-57 | 182 |
| MsG0280008076.01.T01 | MTR_2g436440 | 61.333 | 150 | 58 | 0 | 1 | 150 | 223 | 372 | 1.28e-56 | 187 |
| MsG0280008076.01.T01 | MTR_2g437060 | 61.333 | 150 | 58 | 0 | 1 | 150 | 232 | 381 | 1.47e-56 | 187 |
| MsG0280008076.01.T01 | MTR_2g437080 | 59.333 | 150 | 61 | 0 | 1 | 150 | 217 | 366 | 6.28e-56 | 186 |
| MsG0280008076.01.T01 | MTR_2g436400 | 58.667 | 150 | 62 | 0 | 1 | 150 | 224 | 373 | 2.16e-54 | 181 |
| MsG0280008076.01.T01 | MTR_2g437040 | 58.000 | 150 | 63 | 0 | 1 | 150 | 217 | 366 | 4.66e-53 | 178 |
| MsG0280008076.01.T01 | MTR_4g119550 | 54.717 | 159 | 72 | 0 | 1 | 159 | 227 | 385 | 4.16e-52 | 176 |
| MsG0280008076.01.T01 | MTR_2g437030 | 56.000 | 150 | 66 | 0 | 1 | 150 | 303 | 452 | 3.46e-51 | 175 |
| MsG0280008076.01.T01 | MTR_2g437260 | 50.943 | 159 | 78 | 0 | 1 | 159 | 213 | 371 | 4.19e-47 | 163 |
| MsG0280008076.01.T01 | MTR_2g436460 | 54.967 | 151 | 67 | 1 | 1 | 150 | 222 | 372 | 3.15e-45 | 157 |
| MsG0280008076.01.T01 | MTR_4g119580 | 51.333 | 150 | 73 | 0 | 1 | 150 | 219 | 368 | 5.98e-45 | 157 |
| MsG0280008076.01.T01 | MTR_4g120380 | 49.333 | 150 | 76 | 0 | 1 | 150 | 219 | 368 | 1.83e-43 | 153 |
| MsG0280008076.01.T01 | MTR_4g120380 | 51.515 | 132 | 64 | 0 | 1 | 132 | 219 | 350 | 3.07e-39 | 142 |
| MsG0280008076.01.T01 | MTR_4g120380 | 38.462 | 130 | 61 | 4 | 4 | 119 | 292 | 416 | 3.74e-13 | 69.7 |
| MsG0280008076.01.T01 | MTR_2g019840 | 50.676 | 148 | 71 | 2 | 3 | 150 | 222 | 367 | 3.60e-36 | 134 |
| MsG0280008076.01.T01 | MTR_2g019810 | 51.333 | 150 | 71 | 2 | 1 | 150 | 208 | 355 | 1.11e-35 | 132 |
| MsG0280008076.01.T01 | MTR_7g068350 | 53.509 | 114 | 47 | 1 | 198 | 305 | 116 | 229 | 1.42e-30 | 115 |
| MsG0280008076.01.T01 | MTR_4g119570 | 38.000 | 150 | 60 | 1 | 1 | 150 | 111 | 227 | 7.22e-27 | 105 |
| MsG0280008076.01.T01 | MTR_3g085240 | 57.609 | 92 | 22 | 1 | 54 | 145 | 174 | 248 | 4.77e-24 | 98.6 |
| MsG0280008076.01.T01 | MTR_3g450500 | 30.405 | 148 | 103 | 0 | 1 | 148 | 219 | 366 | 7.15e-19 | 86.3 |
| MsG0280008076.01.T01 | MTR_4g007490 | 31.081 | 148 | 102 | 0 | 1 | 148 | 217 | 364 | 2.97e-18 | 84.3 |
| MsG0280008076.01.T01 | MTR_5g098775 | 59.677 | 62 | 25 | 0 | 221 | 282 | 129 | 190 | 2.14e-15 | 73.9 |
| MsG0280008076.01.T01 | MTR_2g436380 | 60.714 | 56 | 22 | 0 | 1 | 56 | 5 | 60 | 1.06e-14 | 73.2 |
| MsG0280008076.01.T01 | MTR_8g081000 | 27.703 | 148 | 107 | 0 | 1 | 148 | 234 | 381 | 2.03e-13 | 70.5 |
| MsG0280008076.01.T01 | MTR_8g081000 | 27.703 | 148 | 107 | 0 | 1 | 148 | 234 | 381 | 2.16e-13 | 70.5 |
| MsG0280008076.01.T01 | MTR_8g081000 | 27.703 | 148 | 107 | 0 | 1 | 148 | 234 | 381 | 2.67e-13 | 70.1 |
| MsG0280008076.01.T01 | MTR_8g080990 | 31.081 | 148 | 102 | 0 | 1 | 148 | 221 | 368 | 5.10e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008076.01.T01 | AT5G07900 | 35.333 | 150 | 96 | 1 | 2 | 150 | 249 | 398 | 1.40e-26 | 108 |
| MsG0280008076.01.T01 | AT5G64950 | 34.507 | 142 | 89 | 1 | 6 | 143 | 225 | 366 | 6.36e-15 | 75.1 |
| MsG0280008076.01.T01 | AT1G21150 | 29.605 | 152 | 102 | 2 | 1 | 149 | 235 | 384 | 3.96e-13 | 69.7 |
| MsG0280008076.01.T01 | AT1G21150 | 29.605 | 152 | 102 | 2 | 1 | 149 | 299 | 448 | 3.96e-13 | 69.7 |
| MsG0280008076.01.T01 | AT1G21150 | 30.345 | 145 | 96 | 2 | 8 | 149 | 206 | 348 | 5.38e-13 | 68.9 |
Find 56 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAGGAAGTTAAGGATTT+AGG | 0.126977 | 2:+25153617 | MsG0280008076.01.T01:CDS |
| CATCCTTCGACGACTAATTT+TGG | 0.144352 | 2:+25153644 | MsG0280008076.01.T01:CDS |
| TTCAATTGATAAGATTAATT+TGG | 0.211307 | 2:+25153799 | MsG0280008076.01.T01:CDS |
| TGGAGGAAGTTAAGGATTTA+GGG | 0.239570 | 2:+25153618 | MsG0280008076.01.T01:CDS |
| ATTAAGTTGATAAAAGTTAA+AGG | 0.249611 | 2:-25154588 | None:intergenic |
| AAACTATAACCAAACATAAT+TGG | 0.255041 | 2:-25153878 | None:intergenic |
| TTAATTTGGTGATGAGCTTT+TGG | 0.267548 | 2:+25153813 | MsG0280008076.01.T01:CDS |
| AGACCAACCCCATTTCTTAA+AGG | 0.278227 | 2:-25153726 | None:intergenic |
| ACAATAATTGATCTCAGATT+TGG | 0.295848 | 2:-25154633 | None:intergenic |
| AATTGACCCTTTAAAATTGC+TGG | 0.297294 | 2:+25154844 | MsG0280008076.01.T01:CDS |
| GGTTGTTAGGATATAGAATT+TGG | 0.300367 | 2:+25154768 | MsG0280008076.01.T01:CDS |
| TTGGTTATAGTTTACATAAA+AGG | 0.315414 | 2:+25153888 | MsG0280008076.01.T01:CDS |
| AACTTCTCAGAATAAGTAAA+TGG | 0.317837 | 2:-25153986 | None:intergenic |
| GTGTTGATGGTTTGGTTGTT+AGG | 0.338691 | 2:+25154755 | MsG0280008076.01.T01:CDS |
| CAGCAGATGGACGGTGTTGA+TGG | 0.347592 | 2:+25154742 | MsG0280008076.01.T01:CDS |
| TTAAGTCATGGAGGAAGTTA+AGG | 0.351139 | 2:+25153610 | None:intergenic |
| TCTTTCTACAAATCATGATT+TGG | 0.359115 | 2:+25154805 | MsG0280008076.01.T01:CDS |
| AAGTTGATACCTTTAAGAAA+TGG | 0.365182 | 2:+25153717 | MsG0280008076.01.T01:CDS |
| AGTTGATACCTTTAAGAAAT+GGG | 0.365271 | 2:+25153718 | MsG0280008076.01.T01:CDS |
| AAAGTTAAAGGTATTGAAGT+TGG | 0.366681 | 2:-25154576 | None:intergenic |
| ACTAAATGTCCAATTATGTT+TGG | 0.386959 | 2:+25153869 | MsG0280008076.01.T01:CDS |
| TATGATGTTAGGAAACCTAT+AGG | 0.405755 | 2:+25154527 | MsG0280008076.01.T01:CDS |
| AAAATCAACTAAATTTGAAA+TGG | 0.413967 | 2:-25154420 | None:intergenic |
| TAAAGAACTGCACACCCTAT+AGG | 0.422020 | 2:-25154542 | None:intergenic |
| TCAATTGGGTCGGAATTCCT+TGG | 0.436015 | 2:+25153841 | MsG0280008076.01.T01:CDS |
| AAGTTAAAGGTATTGAAGTT+GGG | 0.440275 | 2:-25154575 | None:intergenic |
| GCCAACTGAATTATGATGTT+AGG | 0.441392 | 2:+25154516 | MsG0280008076.01.T01:CDS |
| TCAGTAGAGCTGTGGGTGGG+TGG | 0.444640 | 2:+25154468 | MsG0280008076.01.T01:CDS |
| GATGGACGGTGTTGATGGTT+TGG | 0.457077 | 2:+25154747 | MsG0280008076.01.T01:CDS |
| ATTGACCCTTTAAAATTGCT+GGG | 0.471246 | 2:+25154845 | MsG0280008076.01.T01:CDS |
| TCCTAACATCATAATTCAGT+TGG | 0.471346 | 2:-25154517 | None:intergenic |
| CAGTAGAGCTGTGGGTGGGT+GGG | 0.472660 | 2:+25154469 | MsG0280008076.01.T01:CDS |
| GATACATCCTGGTTTGATGT+TGG | 0.489711 | 2:+25153775 | MsG0280008076.01.T01:CDS |
| CTGCAATTTCTATTTATGAA+AGG | 0.514927 | 2:+25153932 | MsG0280008076.01.T01:CDS |
| ATGATGTTAGGAAACCTATA+GGG | 0.519372 | 2:+25154528 | MsG0280008076.01.T01:CDS |
| TACATAAAAGGATCATTCCA+AGG | 0.520767 | 2:+25153900 | MsG0280008076.01.T01:CDS |
| CAAGCATTTAGGATACATCC+TGG | 0.534523 | 2:+25153764 | MsG0280008076.01.T01:CDS |
| AATTGCAGAACTGAGGCCCT+TGG | 0.541980 | 2:-25153917 | None:intergenic |
| AGGGTGTGCAGTTCTTTATG+AGG | 0.545642 | 2:+25154547 | MsG0280008076.01.T01:CDS |
| GTTGATACCTTTAAGAAATG+GGG | 0.553181 | 2:+25153719 | MsG0280008076.01.T01:CDS |
| TGGACATTTAGTAAGTTCCA+AGG | 0.554638 | 2:-25153858 | None:intergenic |
| ACTTTGTCATTATCAGCAGA+TGG | 0.559067 | 2:+25154729 | MsG0280008076.01.T01:CDS |
| ATTTGGTTAACTTGTCGCGC+TGG | 0.561761 | 2:-25154616 | None:intergenic |
| ATACCTTTAAGAAATGGGGT+TGG | 0.587688 | 2:+25153723 | MsG0280008076.01.T01:CDS |
| TTTGGGTTAATCAATTGGGT+CGG | 0.591122 | 2:+25153831 | MsG0280008076.01.T01:CDS |
| ATTCCAAAATTAGTCGTCGA+AGG | 0.594006 | 2:-25153647 | None:intergenic |
| TAAAATCCTCAGTAGAGCTG+TGG | 0.599699 | 2:+25154460 | MsG0280008076.01.T01:CDS |
| AAAATCCTCAGTAGAGCTGT+GGG | 0.604572 | 2:+25154461 | MsG0280008076.01.T01:CDS |
| TCCTCAGTAGAGCTGTGGGT+GGG | 0.612120 | 2:+25154465 | MsG0280008076.01.T01:CDS |
| ACATAAAAGGATCATTCCAA+GGG | 0.612722 | 2:+25153901 | MsG0280008076.01.T01:CDS |
| TGTCATTATCAGCAGATGGA+CGG | 0.615443 | 2:+25154733 | MsG0280008076.01.T01:CDS |
| TTGACCCTTTAAAATTGCTG+GGG | 0.626293 | 2:+25154846 | MsG0280008076.01.T01:CDS |
| ATCCTCAGTAGAGCTGTGGG+TGG | 0.641377 | 2:+25154464 | MsG0280008076.01.T01:CDS |
| ATTGAAGCCAACATCAAACC+AGG | 0.644090 | 2:-25153782 | None:intergenic |
| AAATAGAAATTGCAGAACTG+AGG | 0.650467 | 2:-25153924 | None:intergenic |
| ACCCACCCACAGCTCTACTG+AGG | 0.663345 | 2:-25154466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAACTAAATTTGAAA+TGG | - | Chr2:25154423-25154442 | None:intergenic | 15.0% |
| !! | TTCAATTGATAAGATTAATT+TGG | + | Chr2:25153799-25153818 | MsG0280008076.01.T01:CDS | 15.0% |
| !!! | ATTAAGTTGATAAAAGTTAA+AGG | - | Chr2:25154591-25154610 | None:intergenic | 15.0% |
| !! | AAACTATAACCAAACATAAT+TGG | - | Chr2:25153881-25153900 | None:intergenic | 20.0% |
| !! | AAAGTTTGAGTAAAAAACTT+TGG | + | Chr2:25153687-25153706 | MsG0280008076.01.T01:CDS | 20.0% |
| !! | AAGTTTGAGTAAAAAACTTT+GGG | + | Chr2:25153688-25153707 | MsG0280008076.01.T01:CDS | 20.0% |
| !! | TTGGTTATAGTTTACATAAA+AGG | + | Chr2:25153888-25153907 | MsG0280008076.01.T01:CDS | 20.0% |
| !!! | GTTTTTGTTATCATCAATTA+TGG | + | Chr2:25154237-25154256 | MsG0280008076.01.T01:intron | 20.0% |
| ! | AACTTCTCAGAATAAGTAAA+TGG | - | Chr2:25153989-25154008 | None:intergenic | 25.0% |
| ! | AATGAAACTTGCAAATACAA+AGG | + | Chr2:25154078-25154097 | MsG0280008076.01.T01:intron | 25.0% |
| ! | ACAATAATTGATCTCAGATT+TGG | - | Chr2:25154636-25154655 | None:intergenic | 25.0% |
| ! | ACTAAATGTCCAATTATGTT+TGG | + | Chr2:25153869-25153888 | MsG0280008076.01.T01:CDS | 25.0% |
| ! | AGATCAACAAATTACACATT+TGG | - | Chr2:25154125-25154144 | None:intergenic | 25.0% |
| ! | CTGCAATTTCTATTTATGAA+AGG | + | Chr2:25153932-25153951 | MsG0280008076.01.T01:CDS | 25.0% |
| ! | TCTTTCTACAAATCATGATT+TGG | + | Chr2:25154805-25154824 | MsG0280008076.01.T01:CDS | 25.0% |
| ! | TTATCTATTAAAGCTGTATG+AGG | + | Chr2:25154051-25154070 | MsG0280008076.01.T01:intron | 25.0% |
| !! | AGTTGATACCTTTAAGAAAT+GGG | + | Chr2:25153718-25153737 | MsG0280008076.01.T01:CDS | 25.0% |
| !! | GATTTTGTTCTTAAGATGTT+TGG | + | Chr2:25154437-25154456 | MsG0280008076.01.T01:CDS | 25.0% |
| !!! | AAAGTTAAAGGTATTGAAGT+TGG | - | Chr2:25154579-25154598 | None:intergenic | 25.0% |
| !!! | AAGTTAAAGGTATTGAAGTT+GGG | - | Chr2:25154578-25154597 | None:intergenic | 25.0% |
| !!! | AAGTTGATACCTTTAAGAAA+TGG | + | Chr2:25153717-25153736 | MsG0280008076.01.T01:CDS | 25.0% |
| !!! | TCTTTGAAATTGCATGTAAT+GGG | - | Chr2:25154281-25154300 | None:intergenic | 25.0% |
| AAATAGAAATTGCAGAACTG+AGG | - | Chr2:25153927-25153946 | None:intergenic | 30.0% | |
| ACATAAAAGGATCATTCCAA+GGG | + | Chr2:25153901-25153920 | MsG0280008076.01.T01:CDS | 30.0% | |
| ATGATGTTAGGAAACCTATA+GGG | + | Chr2:25154528-25154547 | MsG0280008076.01.T01:CDS | 30.0% | |
| CCAAAAAAATGATCTGTAAC+TGG | + | Chr2:25154675-25154694 | MsG0280008076.01.T01:CDS | 30.0% | |
| GGTTGTTAGGATATAGAATT+TGG | + | Chr2:25154768-25154787 | MsG0280008076.01.T01:CDS | 30.0% | |
| TACATAAAAGGATCATTCCA+AGG | + | Chr2:25153900-25153919 | MsG0280008076.01.T01:CDS | 30.0% | |
| TATGATGTTAGGAAACCTAT+AGG | + | Chr2:25154527-25154546 | MsG0280008076.01.T01:CDS | 30.0% | |
| TCAACAAATTACACATTTGG+TGG | - | Chr2:25154122-25154141 | None:intergenic | 30.0% | |
| TCCTAACATCATAATTCAGT+TGG | - | Chr2:25154520-25154539 | None:intergenic | 30.0% | |
| TGGATAGAAGAAAAAACTGT+GGG | + | Chr2:25154695-25154714 | MsG0280008076.01.T01:CDS | 30.0% | |
| ! | GTTGATACCTTTAAGAAATG+GGG | + | Chr2:25153719-25153738 | MsG0280008076.01.T01:CDS | 30.0% |
| ! | TTGAAGTACTTATGCTATCT+AGG | + | Chr2:25154156-25154175 | MsG0280008076.01.T01:intron | 30.0% |
| !! | AATTGACCCTTTAAAATTGC+TGG | + | Chr2:25154844-25154863 | MsG0280008076.01.T01:CDS | 30.0% |
| !! | ATTGACCCTTTAAAATTGCT+GGG | + | Chr2:25154845-25154864 | MsG0280008076.01.T01:CDS | 30.0% |
| !! | CAAGTTTGTTTTCAGCTTTA+AGG | + | Chr2:25154018-25154037 | MsG0280008076.01.T01:CDS | 30.0% |
| !! | CTCTTTGAAATTGCATGTAA+TGG | - | Chr2:25154282-25154301 | None:intergenic | 30.0% |
| !!! | AAGCTGTTTTTCAAGCATTT+AGG | + | Chr2:25153753-25153772 | MsG0280008076.01.T01:CDS | 30.0% |
| !!! | AGCTTTTGGGTTAATCAATT+GGG | + | Chr2:25153827-25153846 | MsG0280008076.01.T01:CDS | 30.0% |
| !!! | CCAGTTACAGATCATTTTTT+TGG | - | Chr2:25154678-25154697 | None:intergenic | 30.0% |
| !!! | GACTAATTTTGGAATTGCTT+TGG | + | Chr2:25153655-25153674 | MsG0280008076.01.T01:CDS | 30.0% |
| !!! | TAATTTGGTGATGAGCTTTT+GGG | + | Chr2:25153814-25153833 | MsG0280008076.01.T01:CDS | 30.0% |
| !!! | TTAATTTGGTGATGAGCTTT+TGG | + | Chr2:25153813-25153832 | MsG0280008076.01.T01:CDS | 30.0% |
| !!! | TTGCTATTTTGAACTACTGT+TGG | + | Chr2:25154215-25154234 | MsG0280008076.01.T01:intron | 30.0% |
| ACCTCCAAAAATCTGTTCTT+CGG | + | Chr2:25154319-25154338 | MsG0280008076.01.T01:intron | 35.0% | |
| ACTTTGTCATTATCAGCAGA+TGG | + | Chr2:25154729-25154748 | MsG0280008076.01.T01:CDS | 35.0% | |
| ATGGAGGAAGTTAAGGATTT+AGG | + | Chr2:25153617-25153636 | MsG0280008076.01.T01:CDS | 35.0% | |
| ATTCCAAAATTAGTCGTCGA+AGG | - | Chr2:25153650-25153669 | None:intergenic | 35.0% | |
| CCAGCAACAATACAATAGAA+AGG | - | Chr2:25154365-25154384 | None:intergenic | 35.0% | |
| CCTTTCTATTGTATTGTTGC+TGG | + | Chr2:25154362-25154381 | MsG0280008076.01.T01:intron | 35.0% | |
| CTGGATAGAAGAAAAAACTG+TGG | + | Chr2:25154694-25154713 | MsG0280008076.01.T01:CDS | 35.0% | |
| GCAAATACAAAGGAGAACAT+TGG | + | Chr2:25154088-25154107 | MsG0280008076.01.T01:intron | 35.0% | |
| GCCAACTGAATTATGATGTT+AGG | + | Chr2:25154516-25154535 | MsG0280008076.01.T01:CDS | 35.0% | |
| TGGACATTTAGTAAGTTCCA+AGG | - | Chr2:25153861-25153880 | None:intergenic | 35.0% | |
| TGGAGGAAGTTAAGGATTTA+GGG | + | Chr2:25153618-25153637 | MsG0280008076.01.T01:CDS | 35.0% | |
| ! | ACATTCCCCAGCAATTTTAA+AGG | - | Chr2:25154854-25154873 | None:intergenic | 35.0% |
| ! | ATACCTTTAAGAAATGGGGT+TGG | + | Chr2:25153723-25153742 | MsG0280008076.01.T01:CDS | 35.0% |
| ! | CAAATTACACATTTGGTGGA+TGG | - | Chr2:25154118-25154137 | None:intergenic | 35.0% |
| ! | CATTCCCCAGCAATTTTAAA+GGG | - | Chr2:25154853-25154872 | None:intergenic | 35.0% |
| ! | TTTGGGTTAATCAATTGGGT+CGG | + | Chr2:25153831-25153850 | MsG0280008076.01.T01:CDS | 35.0% |
| !! | TTGACCCTTTAAAATTGCTG+GGG | + | Chr2:25154846-25154865 | MsG0280008076.01.T01:CDS | 35.0% |
| !!! | GAGCTTTTGGGTTAATCAAT+TGG | + | Chr2:25153826-25153845 | MsG0280008076.01.T01:CDS | 35.0% |
| !!! | GTTTGTTTTCAGCTTTAAGG+AGG | + | Chr2:25154021-25154040 | MsG0280008076.01.T01:CDS | 35.0% |
| AAAATCCTCAGTAGAGCTGT+GGG | + | Chr2:25154461-25154480 | MsG0280008076.01.T01:CDS | 40.0% | |
| AGACCAACCCCATTTCTTAA+AGG | - | Chr2:25153729-25153748 | None:intergenic | 40.0% | |
| ATCTGTTCTTCGGCAACTAT+TGG | + | Chr2:25154329-25154348 | MsG0280008076.01.T01:intron | 40.0% | |
| ATGCTATCTAGGTCAGGATA+AGG | + | Chr2:25154167-25154186 | MsG0280008076.01.T01:intron | 40.0% | |
| ATTGAAGCCAACATCAAACC+AGG | - | Chr2:25153785-25153804 | None:intergenic | 40.0% | |
| GCACAAAAATGGTACAGCAA+GGG | - | Chr2:25154390-25154409 | None:intergenic | 40.0% | |
| GTACTTATGCTATCTAGGTC+AGG | + | Chr2:25154161-25154180 | MsG0280008076.01.T01:intron | 40.0% | |
| TAAAATCCTCAGTAGAGCTG+TGG | + | Chr2:25154460-25154479 | MsG0280008076.01.T01:CDS | 40.0% | |
| TAAAGAACTGCACACCCTAT+AGG | - | Chr2:25154545-25154564 | None:intergenic | 40.0% | |
| TGCACAAAAATGGTACAGCA+AGG | - | Chr2:25154391-25154410 | None:intergenic | 40.0% | |
| TGCTATCTAGGTCAGGATAA+GGG | + | Chr2:25154168-25154187 | MsG0280008076.01.T01:intron | 40.0% | |
| TGTCATTATCAGCAGATGGA+CGG | + | Chr2:25154733-25154752 | MsG0280008076.01.T01:CDS | 40.0% | |
| ! | CAAGCATTTAGGATACATCC+TGG | + | Chr2:25153764-25153783 | MsG0280008076.01.T01:CDS | 40.0% |
| ! | CATCCTTCGACGACTAATTT+TGG | + | Chr2:25153644-25153663 | MsG0280008076.01.T01:CDS | 40.0% |
| ! | GATACATCCTGGTTTGATGT+TGG | + | Chr2:25153775-25153794 | MsG0280008076.01.T01:CDS | 40.0% |
| ! | GTTGCCGAAGAACAGATTTT+TGG | - | Chr2:25154326-25154345 | None:intergenic | 40.0% |
| !! | GTGTTGATGGTTTGGTTGTT+AGG | + | Chr2:25154755-25154774 | MsG0280008076.01.T01:CDS | 40.0% |
| !! | TTGCTGTACCATTTTTGTGC+AGG | + | Chr2:25154390-25154409 | MsG0280008076.01.T01:intron | 40.0% |
| AGGGTGTGCAGTTCTTTATG+AGG | + | Chr2:25154547-25154566 | MsG0280008076.01.T01:CDS | 45.0% | |
| GAGCAACACCTGCACAAAAA+TGG | - | Chr2:25154401-25154420 | None:intergenic | 45.0% | |
| TCAATTGGGTCGGAATTCCT+TGG | + | Chr2:25153841-25153860 | MsG0280008076.01.T01:CDS | 45.0% | |
| !! | ATTTGGTTAACTTGTCGCGC+TGG | - | Chr2:25154619-25154638 | None:intergenic | 45.0% |
| !! | GCCGAAGAACAGATTTTTGG+AGG | - | Chr2:25154323-25154342 | None:intergenic | 45.0% |
| AATTGCAGAACTGAGGCCCT+TGG | - | Chr2:25153920-25153939 | None:intergenic | 50.0% | |
| !! | GATGGACGGTGTTGATGGTT+TGG | + | Chr2:25154747-25154766 | MsG0280008076.01.T01:CDS | 50.0% |
| ATCCTCAGTAGAGCTGTGGG+TGG | + | Chr2:25154464-25154483 | MsG0280008076.01.T01:CDS | 55.0% | |
| TCCTCAGTAGAGCTGTGGGT+GGG | + | Chr2:25154465-25154484 | MsG0280008076.01.T01:CDS | 55.0% | |
| ! | CAGCAGATGGACGGTGTTGA+TGG | + | Chr2:25154742-25154761 | MsG0280008076.01.T01:CDS | 55.0% |
| ACCCACCCACAGCTCTACTG+AGG | - | Chr2:25154469-25154488 | None:intergenic | 60.0% | |
| CAGTAGAGCTGTGGGTGGGT+GGG | + | Chr2:25154469-25154488 | MsG0280008076.01.T01:CDS | 60.0% | |
| TCAGTAGAGCTGTGGGTGGG+TGG | + | Chr2:25154468-25154487 | MsG0280008076.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 25153617 | 25154880 | 25153617 | ID=MsG0280008076.01;Name=MsG0280008076.01 |
| Chr2 | mRNA | 25153617 | 25154880 | 25153617 | ID=MsG0280008076.01.T01;Parent=MsG0280008076.01;Name=MsG0280008076.01.T01;_AED=0.48;_eAED=0.75;_QI=0|0|0|1|1|1|2|0|305 |
| Chr2 | exon | 25153617 | 25154065 | 25153617 | ID=MsG0280008076.01.T01:exon:14028;Parent=MsG0280008076.01.T01 |
| Chr2 | exon | 25154412 | 25154880 | 25154412 | ID=MsG0280008076.01.T01:exon:14029;Parent=MsG0280008076.01.T01 |
| Chr2 | CDS | 25153617 | 25154065 | 25153617 | ID=MsG0280008076.01.T01:cds;Parent=MsG0280008076.01.T01 |
| Chr2 | CDS | 25154412 | 25154880 | 25154412 | ID=MsG0280008076.01.T01:cds;Parent=MsG0280008076.01.T01 |
| Gene Sequence |
| Protein sequence |
