AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0007570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007570 MtrunA17_Chr1g0148251 93.133 233 5 2 2 224 3 234 2.29e-156 432
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0007570 AT5G19940.1 58.650 237 81 4 3 223 2 237 9.03e-94 275
Msa0007570 AT5G19940.2 56.502 223 80 4 3 209 2 223 3.69e-83 247

Find 60 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAATGCCCTTTAATATT+TGG 0.156574 1_1:-10853473 Msa0007570:CDS
AGATTATAATTATTTAATTT+AGG 0.186486 1_1:-10850960 Msa0007570:three_prime_UTR
AATTCCTTTCATGAAAATTC+TGG 0.226261 1_1:-10851190 Msa0007570:three_prime_UTR
GATTATAATTATTTAATTTA+GGG 0.246927 1_1:-10850959 Msa0007570:three_prime_UTR
GATTCACCTCCAAATATTAA+AGG 0.263064 1_1:+10853464 None:intergenic
CATGATCCTAACTTCAATTC+AGG 0.271381 1_1:+10851345 None:intergenic
AAAATCGCATTTACTGCTTT+AGG 0.285729 1_1:-10852386 Msa0007570:intron
GAAACGGATGTTAAATGATT+TGG 0.301672 1_1:+10855546 None:intergenic
CAAAACAAAGGAAATGGTTC+AGG 0.305881 1_1:-10852438 Msa0007570:CDS
GAAAGAACTTGTTCACTGTT+TGG 0.307124 1_1:-10855694 Msa0007570:five_prime_UTR
AAAGAACTTGTTCACTGTTT+GGG 0.342121 1_1:-10855693 Msa0007570:five_prime_UTR
GAAGCGCCTGAATTGAAGTT+AGG 0.366884 1_1:-10851351 Msa0007570:CDS
AGAGAAGCTACGAGATCATT+AGG 0.383848 1_1:+10855454 None:intergenic
TTGTCTCAAAATGCACTAGT+AGG 0.397074 1_1:-10851053 Msa0007570:three_prime_UTR
AGAGGTGGCTGAAGTAGTTC+AGG 0.402001 1_1:-10853525 Msa0007570:CDS
GGTGGGTATCGGAGTGCATT+GGG 0.413827 1_1:-10852473 Msa0007570:CDS
TTTCATCTACATAAGTGATT+CGG 0.422972 1_1:+10851286 None:intergenic
ATGTTAAATGATTTGGATGT+TGG 0.431771 1_1:+10855553 None:intergenic
GGATCATGGAAAGGACAATA+TGG 0.440706 1_1:-10851330 Msa0007570:CDS
CGTAGCTTCTCTTCTTTCAA+AGG 0.466795 1_1:-10855443 Msa0007570:intron
ATTCACCTCCAAATATTAAA+GGG 0.468719 1_1:+10853465 None:intergenic
ATTCTGGCAAGTTTGTAACT+TGG 0.473722 1_1:-10851174 Msa0007570:three_prime_UTR
AGGTGGGTATCGGAGTGCAT+TGG 0.479445 1_1:-10852474 Msa0007570:CDS
AATATTAAAGGGCATTTCAC+CGG 0.488802 1_1:+10853476 None:intergenic
GCCAAGGGGTAATGATGTCT+TGG 0.494819 1_1:+10851084 None:intergenic
TCTAACACGGATGTCCGAAC+AGG 0.503886 1_1:-10855478 Msa0007570:CDS
AAATGCCCTTTAATATTTGG+AGG 0.511861 1_1:-10853470 Msa0007570:intron
CATCACCTGGAGGTGGGTAT+CGG 0.512858 1_1:-10852484 Msa0007570:CDS
TCCAAGACATCATTACCCCT+TGG 0.513026 1_1:-10851085 Msa0007570:three_prime_UTR
TGAGACAAACTCTGCAGCCA+AGG 0.525005 1_1:+10851068 None:intergenic
AATCAGGTGGTGCAAACAGA+TGG 0.526942 1_1:-10853578 Msa0007570:intron
TGTTCACAGCCAACATCACC+TGG 0.527228 1_1:-10852497 Msa0007570:CDS
TCAAAGCTCTAGATACTGAA+TGG 0.532008 1_1:-10851389 Msa0007570:CDS
CGAGATCATTAGGACCTGTT+CGG 0.533285 1_1:+10855464 None:intergenic
ATCCGTGTTAGAAATAGAAA+CGG 0.544064 1_1:+10855489 None:intergenic
CTGAATTGAAGTTAGGATCA+TGG 0.550366 1_1:-10851344 Msa0007570:CDS
GTACAGTGAGCACACCCTCA+TGG 0.559008 1_1:-10855653 Msa0007570:exon
TTCCGTTTCTATTTCTAACA+CGG 0.559401 1_1:-10855491 Msa0007570:CDS
TACCCACCTCCAGGTGATGT+TGG 0.563634 1_1:+10852488 None:intergenic
GAGACAAACTCTGCAGCCAA+GGG 0.565745 1_1:+10851069 None:intergenic
CAGCCAACATCACCTGGAGG+TGG 0.573881 1_1:-10852491 Msa0007570:CDS
TGTCTCAAAATGCACTAGTA+GGG 0.574070 1_1:-10851052 Msa0007570:three_prime_UTR
AAGCATAAGCTGCAGCCATG+AGG 0.581398 1_1:+10855638 None:intergenic
GCACTCCGATACCCACCTCC+AGG 0.585082 1_1:+10852479 None:intergenic
AGCATAAGCTGCAGCCATGA+GGG 0.589302 1_1:+10855639 None:intergenic
GAAGTATTGTGTGAAGGAGC+CGG 0.602871 1_1:-10853495 Msa0007570:CDS
TATTTAATTTAGGGAATGCG+AGG 0.615461 1_1:-10850950 Msa0007570:three_prime_UTR
AGGTTAGGATTGGGATCCAG+AGG 0.617399 1_1:-10851258 Msa0007570:CDS
TTGCTTTCCAGAGTGGGATG+TGG 0.621177 1_1:-10852525 Msa0007570:intron
CAGGTGGTGCAAACAGATGG+AGG 0.622209 1_1:-10853575 Msa0007570:CDS
AGCCAACATCACCTGGAGGT+GGG 0.640359 1_1:-10852490 Msa0007570:CDS
GTTAGAAATAGAAACGGAAG+CGG 0.641989 1_1:+10855495 None:intergenic
ATTGCAGAAGTATTGTGTGA+AGG 0.651945 1_1:-10853501 Msa0007570:CDS
TTGAAGTTAGGATCATGGAA+AGG 0.658607 1_1:-10851339 Msa0007570:CDS
AAAGGAAGAACACAAAGAGG+TGG 0.660750 1_1:-10853540 Msa0007570:CDS
GCTATATTATAGTTACAAAG+TGG 0.667027 1_1:-10851028 Msa0007570:three_prime_UTR
GCAAAAGGAAGAACACAAAG+AGG 0.672287 1_1:-10853543 Msa0007570:CDS
TCATGGAAAGGACAATATGG+AGG 0.694503 1_1:-10851327 Msa0007570:CDS
AGACAAACTCTGCAGCCAAG+GGG 0.701069 1_1:+10851070 None:intergenic
TCACAGCCAACATCACCTGG+AGG 0.764531 1_1:-10852494 Msa0007570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAAAAATAAAAAA+AGG + chr1_1:10855017-10855036 None:intergenic 0.0%
!! GAAAGTTATTATTATTATTA+TGG + chr1_1:10851007-10851026 None:intergenic 10.0%
!!! ATATTAACTAATTTTCTTAA+GGG + chr1_1:10851768-10851787 None:intergenic 10.0%
!! ATTAAATTAATCATCAAAAT+AGG - chr1_1:10851839-10851858 Msa0007570:intron 10.0%
!!! TTTTTATTTTACTTTACTAT+TGG - chr1_1:10851909-10851928 Msa0007570:intron 10.0%
!! AAATATTAAATGTAATGAAA+TGG + chr1_1:10852919-10852938 None:intergenic 10.0%
!! AATAAACTAAAAATAGTTTA+TGG - chr1_1:10853354-10853373 Msa0007570:intron 10.0%
!! TAATTTCTTTACAATTTAAA+AGG - chr1_1:10853703-10853722 Msa0007570:intron 10.0%
!!! TACTGTTTTTTAAATTATTT+TGG - chr1_1:10853956-10853975 Msa0007570:intron 10.0%
!!! ACTGTTTTTTAAATTATTTT+GGG - chr1_1:10853957-10853976 Msa0007570:intron 10.0%
!!! GATTTTAAGTATTTAATTAT+AGG - chr1_1:10854916-10854935 Msa0007570:intron 10.0%
!!! CATATTAACTAATTTTCTTA+AGG + chr1_1:10851769-10851788 None:intergenic 15.0%
!!! TGATGTTTTAGAAAAATAAT+TGG - chr1_1:10852618-10852637 Msa0007570:intron 15.0%
!!! GATGTTTTAGAAAAATAATT+GGG - chr1_1:10852619-10852638 Msa0007570:intron 15.0%
!!! ATGTTTTAGAAAAATAATTG+GGG - chr1_1:10852620-10852639 Msa0007570:intron 15.0%
!!! AAATAAAGATTTAAAAGTAC+AGG + chr1_1:10852953-10852972 None:intergenic 15.0%
!!! TTATATTACCTTTTATTTGT+TGG - chr1_1:10853537-10853556 Msa0007570:CDS 15.0%
!!! CTGTTTTTTAAATTATTTTG+GGG - chr1_1:10853958-10853977 Msa0007570:intron 15.0%
!!! ATTTCTGTTTTTTTTAATCA+AGG - chr1_1:10854391-10854410 Msa0007570:intron 15.0%
!!! TTGTATGAATTTTATACACA+CGG - chr1_1:10851237-10851256 Msa0007570:CDS 20.0%
!! AAGTCTTAGAATATTAGTAA+TGG - chr1_1:10851426-10851445 Msa0007570:intron 20.0%
!! ACCAAAAAAAAAAAAGAGAA+GGG - chr1_1:10851575-10851594 Msa0007570:intron 20.0%
!! AAGGAAATTATTACCTTAAA+AGG + chr1_1:10851702-10851721 None:intergenic 20.0%
!!! AAGGTAATAATTTCCTTTTT+TGG - chr1_1:10851705-10851724 Msa0007570:intron 20.0%
!!! TTCCTAACATTTTCTTTTAT+AGG + chr1_1:10852296-10852315 None:intergenic 20.0%
!! ACTAAAATATTGTTTGTGAT+AGG - chr1_1:10852339-10852358 Msa0007570:intron 20.0%
!! ATTAAATGTAATGAAATGGA+AGG + chr1_1:10852915-10852934 None:intergenic 20.0%
!!! GTAAAATTCAATTTTCAGTA+TGG + chr1_1:10852976-10852995 None:intergenic 20.0%
!!! TTGAATTTTACCTTTTAATC+AGG - chr1_1:10852985-10853004 Msa0007570:intron 20.0%
!! ACTTTATTAAATATGCAGAT+AGG + chr1_1:10853206-10853225 None:intergenic 20.0%
!! TTTATACATAAGCACTTATA+TGG + chr1_1:10853249-10853268 None:intergenic 20.0%
!! AATAGAAATTTGAAAAACAC+GGG + chr1_1:10853505-10853524 None:intergenic 20.0%
!! GAATAGAAATTTGAAAAACA+CGG + chr1_1:10853506-10853525 None:intergenic 20.0%
!! AATAACAATTAACAACAAAG+TGG - chr1_1:10853591-10853610 Msa0007570:intron 20.0%
!! TTACAATTTAAAAGGACATT+AGG - chr1_1:10853711-10853730 Msa0007570:intron 20.0%
!! TACAATTTAAAAGGACATTA+GGG - chr1_1:10853712-10853731 Msa0007570:intron 20.0%
!! ACCAATTAAACAATAAAATG+TGG + chr1_1:10853832-10853851 None:intergenic 20.0%
!!! TTTTTTCAAAACAAAGGAAA+TGG - chr1_1:10854135-10854154 Msa0007570:intron 20.0%
!!! TGTTTTTTTTAATCAAGGTT+GGG - chr1_1:10854396-10854415 Msa0007570:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG - chr1_1:10854579-10854598 Msa0007570:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG + chr1_1:10854579-10854598 None:intergenic 20.0%
!!! ACAAACATTTTACAAATTGA+AGG - chr1_1:10854979-10854998 Msa0007570:intron 20.0%
!! CATAGAAAAGCAATAAAAAA+GGG - chr1_1:10855084-10855103 Msa0007570:intron 20.0%
!!! TTTTTCGAAGAATATGAATT+TGG - chr1_1:10855355-10855374 Msa0007570:intron 20.0%
!! ATGTTAAATGATTTGGATGT+TGG + chr1_1:10851029-10851048 None:intergenic 25.0%
! TGATTATTCTTCTCTTTCAA+CGG - chr1_1:10851261-10851280 Msa0007570:CDS 25.0%
!!! ATATGCAAGTTGATTATCAA+TGG + chr1_1:10851381-10851400 None:intergenic 25.0%
! AATGTTAAAGTTGACTAAAG+AGG - chr1_1:10851472-10851491 Msa0007570:intron 25.0%
! GACCAAAAAAAAAAAAGAGA+AGG - chr1_1:10851574-10851593 Msa0007570:intron 25.0%
!!! TCCCTTCTCTTTTTTTTTTT+TGG + chr1_1:10851579-10851598 None:intergenic 25.0%
!! GTCAAAAATGTTTCCTTTTA+AGG - chr1_1:10851686-10851705 Msa0007570:intron 25.0%
!!! TAATTTCCTTTTTTGGCATT+CGG - chr1_1:10851712-10851731 Msa0007570:intron 25.0%
! GACCTATAAAAGAAAATGTT+AGG - chr1_1:10852291-10852310 Msa0007570:intron 25.0%
! AGATTTAGAAATTAATGAGC+TGG - chr1_1:10852316-10852335 Msa0007570:intron 25.0%
!! CACGTTATTTATTTCTTACA+CGG - chr1_1:10852578-10852597 Msa0007570:intron 25.0%
! TATATAGTAGTACTAAGCAA+TGG - chr1_1:10852717-10852736 Msa0007570:intron 25.0%
!! AATTTTACCTTTTAATCAGG+TGG - chr1_1:10852988-10853007 Msa0007570:intron 25.0%
! ATTCACCTCCAAATATTAAA+GGG + chr1_1:10853117-10853136 None:intergenic 25.0%
!! TAACTTTTAACACAATCTCA+AGG + chr1_1:10853170-10853189 None:intergenic 25.0%
!!! TTATTTTGGTCTGTTTAGAT+TGG + chr1_1:10853457-10853476 None:intergenic 25.0%
! GAAAAATGCCAACAAATAAA+AGG + chr1_1:10853548-10853567 None:intergenic 25.0%
!! GCCACATTTTATTGTTTAAT+TGG - chr1_1:10853828-10853847 Msa0007570:intron 25.0%
!!! CAGAGTTTTTTTCAAAACAA+AGG - chr1_1:10854129-10854148 Msa0007570:intron 25.0%
!!! ATTTACTGCTTTAGGTTTTT+TGG - chr1_1:10854201-10854220 Msa0007570:intron 25.0%
! ATCATGTCAAATATGTATGA+TGG - chr1_1:10854261-10854280 Msa0007570:intron 25.0%
!!! CTGTTTTTTTTAATCAAGGT+TGG - chr1_1:10854395-10854414 Msa0007570:intron 25.0%
! GTTAGTTAGTAGTTAGTAAA+TGG - chr1_1:10854520-10854539 Msa0007570:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr1_1:10854678-10854697 None:intergenic 25.0%
! CATCCATTAAATGATGTATT+TGG - chr1_1:10854604-10854623 Msa0007570:intron 25.0%
! TGACCAAATACATCATTTAA+TGG + chr1_1:10854610-10854629 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr1_1:10854678-10854697 Msa0007570:intron 25.0%
! AGAATGTTATGTTTACATCA+AGG - chr1_1:10854719-10854738 Msa0007570:intron 25.0%
! GAATGTTATGTTTACATCAA+GGG - chr1_1:10854720-10854739 Msa0007570:intron 25.0%
! AATGTTATGTTTACATCAAG+GGG - chr1_1:10854721-10854740 Msa0007570:intron 25.0%
! AATTGTTACATGTTACTCTT+TGG - chr1_1:10854838-10854857 Msa0007570:intron 25.0%
! TTGAGTCTTAACTAACAAAT+TGG - chr1_1:10854869-10854888 Msa0007570:intron 25.0%
!!! CCTTTTTTATTGCTTTTCTA+TGG + chr1_1:10855086-10855105 None:intergenic 25.0%
! CCATAGAAAAGCAATAAAAA+AGG - chr1_1:10855083-10855102 Msa0007570:intron 25.0%
! CTTACTTGATGTATGAAAAT+GGG - chr1_1:10855155-10855174 Msa0007570:intron 25.0%
! TTTCATCTACATAAGTGATT+CGG + chr1_1:10855296-10855315 None:intergenic 25.0%
! CTTATGTAGATGAAAAAATC+AGG - chr1_1:10855301-10855320 Msa0007570:intron 25.0%
! AATTCCTTTCATGAAAATTC+TGG - chr1_1:10855389-10855408 Msa0007570:intron 25.0%
! GCTATATTATAGTTACAAAG+TGG - chr1_1:10855551-10855570 Msa0007570:CDS 25.0%
! AAAGAACTTGTTCACTGTTT+GGG - chr1_1:10850886-10850905 Msa0007570:three_prime_UTR 30.0%
GAAACGGATGTTAAATGATT+TGG + chr1_1:10851036-10851055 None:intergenic 30.0%
!!! AAACGCATAAGCTGTTTTTA+CGG + chr1_1:10851064-10851083 None:intergenic 30.0%
!! TTCCGTTTCTATTTCTAACA+CGG - chr1_1:10851088-10851107 Msa0007570:three_prime_UTR 30.0%
ATCCGTGTTAGAAATAGAAA+CGG + chr1_1:10851093-10851112 None:intergenic 30.0%
TTGTTGATCAGCTATTATCA+CGG + chr1_1:10851524-10851543 None:intergenic 30.0%
AAAACACCCAATTAAGAGAA+GGG - chr1_1:10851542-10851561 Msa0007570:intron 30.0%
AATCATCAAAATAGGTGAAG+TGG - chr1_1:10851847-10851866 Msa0007570:intron 30.0%
ATCATCAAAATAGGTGAAGT+GGG - chr1_1:10851848-10851867 Msa0007570:intron 30.0%
TAAGACCAATGATGTTCTAT+GGG - chr1_1:10852003-10852022 Msa0007570:intron 30.0%
AATGAGAATACTTGAGAGTT+GGG - chr1_1:10852135-10852154 Msa0007570:intron 30.0%
CTCCTTACTACAAAATCTAT+GGG + chr1_1:10852227-10852246 None:intergenic 30.0%
TCTCCTTACTACAAAATCTA+TGG + chr1_1:10852228-10852247 None:intergenic 30.0%
! AACTTGGTTGTTGTTACTAT+TGG - chr1_1:10852411-10852430 Msa0007570:CDS 30.0%
TGTTGTTACTATTGGCATAA+TGG - chr1_1:10852419-10852438 Msa0007570:CDS 30.0%
TGGGGAATCATGAAATAAAA+TGG - chr1_1:10852638-10852657 Msa0007570:intron 30.0%
!! ATTAGTCTTGCTATAAAGTC+TGG + chr1_1:10852834-10852853 None:intergenic 30.0%
!! AATATTAAAGGGCATTTCAC+CGG + chr1_1:10853106-10853125 None:intergenic 30.0%
GTGAAATGCCCTTTAATATT+TGG - chr1_1:10853106-10853125 Msa0007570:intron 30.0%
AAATGCCCTTTAATATTTGG+AGG - chr1_1:10853109-10853128 Msa0007570:intron 30.0%
GATTCACCTCCAAATATTAA+AGG + chr1_1:10853118-10853137 None:intergenic 30.0%
TATTAAATATGCAGATAGGC+TGG + chr1_1:10853202-10853221 None:intergenic 30.0%
!!! GCTGTTTTTATAAGCAATTC+TGG - chr1_1:10853319-10853338 Msa0007570:intron 30.0%
!!! GTTGGCATTTTTCAAGAATT+TGG - chr1_1:10853555-10853574 Msa0007570:CDS 30.0%
! ATTGCACATTGTTTTCAACT+TGG + chr1_1:10853619-10853638 None:intergenic 30.0%
TTTATCCATAGTGTAGTGTT+TGG - chr1_1:10853640-10853659 Msa0007570:intron 30.0%
TTATCCATAGTGTAGTGTTT+GGG - chr1_1:10853641-10853660 Msa0007570:intron 30.0%
! TTTTGTCAGTATGTTGAACA+AGG + chr1_1:10854034-10854053 None:intergenic 30.0%
!! ATTTTGTTTCTCACAACATC+AGG + chr1_1:10854178-10854197 None:intergenic 30.0%
AAAATCGCATTTACTGCTTT+AGG - chr1_1:10854193-10854212 Msa0007570:intron 30.0%
AGTCTTAACTAACAAATTGG+AGG - chr1_1:10854872-10854891 Msa0007570:intron 30.0%
GCTTACTTGATGTATGAAAA+TGG - chr1_1:10855154-10855173 Msa0007570:intron 30.0%
GTAGATGAAAAAATCAGGTT+AGG - chr1_1:10855306-10855325 Msa0007570:intron 30.0%
TGAAAAAATCAGGTTAGGAT+TGG - chr1_1:10855311-10855330 Msa0007570:intron 30.0%
GAAAAAATCAGGTTAGGATT+GGG - chr1_1:10855312-10855331 Msa0007570:intron 30.0%
! TATTTAATTTAGGGAATGCG+AGG - chr1_1:10855629-10855648 Msa0007570:CDS 30.0%
! GAAAGAACTTGTTCACTGTT+TGG - chr1_1:10850885-10850904 Msa0007570:three_prime_UTR 35.0%
GTTAGAAATAGAAACGGAAG+CGG + chr1_1:10851087-10851106 None:intergenic 35.0%
TTTAATGCTGTCATCATGTG+AGG - chr1_1:10851333-10851352 Msa0007570:CDS 35.0%
! CGGTGTTGAACATTAATACA+AGG + chr1_1:10851504-10851523 None:intergenic 35.0%
CAAAACACCCAATTAAGAGA+AGG - chr1_1:10851541-10851560 Msa0007570:intron 35.0%
GCATTTCCCTTCTCTTAATT+GGG + chr1_1:10851551-10851570 None:intergenic 35.0%
AGCATTTCCCTTCTCTTAAT+TGG + chr1_1:10851552-10851571 None:intergenic 35.0%
TCATCAAAATAGGTGAAGTG+GGG - chr1_1:10851849-10851868 Msa0007570:intron 35.0%
TAATTGATTATGCCAGACTG+TGG - chr1_1:10851880-10851899 Msa0007570:intron 35.0%
TAAAAATTCACTCCACAGTC+TGG + chr1_1:10851895-10851914 None:intergenic 35.0%
AAAATACTGCTCAAGTCGAA+GGG - chr1_1:10851961-10851980 Msa0007570:intron 35.0%
GTAAGACCAATGATGTTCTA+TGG - chr1_1:10852002-10852021 Msa0007570:intron 35.0%
TCTATCCCATAGAACATCAT+TGG + chr1_1:10852011-10852030 None:intergenic 35.0%
!!! CGCTTATTTTATTCTCGTGT+TGG + chr1_1:10852052-10852071 None:intergenic 35.0%
GAATGAGAATACTTGAGAGT+TGG - chr1_1:10852134-10852153 Msa0007570:intron 35.0%
ATGAGAATACTTGAGAGTTG+GGG - chr1_1:10852136-10852155 Msa0007570:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - chr1_1:10852160-10852179 Msa0007570:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG - chr1_1:10852163-10852182 Msa0007570:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG + chr1_1:10852167-10852186 None:intergenic 35.0%
!! AAAGATGGTGGAAAATAGAC+TGG - chr1_1:10852175-10852194 Msa0007570:intron 35.0%
!! AAGATGGTGGAAAATAGACT+GGG - chr1_1:10852176-10852195 Msa0007570:intron 35.0%
AAAATAGACTGGGATGGTTT+GGG - chr1_1:10852186-10852205 Msa0007570:intron 35.0%
! GACCCATAGATTTTGTAGTA+AGG - chr1_1:10852222-10852241 Msa0007570:intron 35.0%
! AGTAAGGAGAGTTGATTAGA+TGG - chr1_1:10852238-10852257 Msa0007570:intron 35.0%
GAGAATAGTTAGATCACTAG+AGG - chr1_1:10852260-10852279 Msa0007570:intron 35.0%
!!! AAGTTTTTTCCCACTAAGTG+GGG + chr1_1:10852396-10852415 None:intergenic 35.0%
!!! CAAGTTTTTTCCCACTAAGT+GGG + chr1_1:10852397-10852416 None:intergenic 35.0%
AACCGATGCACAAATAAACA+GGG - chr1_1:10852444-10852463 Msa0007570:CDS 35.0%
! AACATCAGAGTATCCAAACA+AGG + chr1_1:10852605-10852624 None:intergenic 35.0%
! TTTGAACAAGAGCACAAGAA+TGG - chr1_1:10852755-10852774 Msa0007570:intron 35.0%
!! ATTGCAGAAGTATTGTGTGA+AGG - chr1_1:10853078-10853097 Msa0007570:intron 35.0%
GCACGAATAAATGCATAATG+TGG + chr1_1:10853140-10853159 None:intergenic 35.0%
AGACTATTTGAGAGAGCTTA+CGG + chr1_1:10853398-10853417 None:intergenic 35.0%
! AAGCACTACGCGATTTATTT+TGG + chr1_1:10853471-10853490 None:intergenic 35.0%
TTTACCCAAACACTACACTA+TGG + chr1_1:10853648-10853667 None:intergenic 35.0%
! TGTCATTAAGCACTGTTATC+TGG - chr1_1:10853793-10853812 Msa0007570:intron 35.0%
TCAATCATACATCCTGTGAA+TGG - chr1_1:10853860-10853879 Msa0007570:intron 35.0%
ACAAAATTGCTTTCCAGAGT+GGG - chr1_1:10854048-10854067 Msa0007570:intron 35.0%
CAAAACAAAGGAAATGGTTC+AGG - chr1_1:10854141-10854160 Msa0007570:intron 35.0%
!!! ACTGCTTTAGGTTTTTTGGA+TGG - chr1_1:10854205-10854224 Msa0007570:intron 35.0%
!!! TTTAGGTTTTTTGGATGGAG+AGG - chr1_1:10854210-10854229 Msa0007570:intron 35.0%
TCAAAGATACGAATTACGGT+GGG + chr1_1:10854290-10854309 None:intergenic 35.0%
! ATTGATGATCAGTCCCATAA+CGG + chr1_1:10854361-10854380 None:intergenic 35.0%
ACTGATCATCAATCATTAGC+TGG - chr1_1:10854368-10854387 Msa0007570:intron 35.0%
TTAATAGTATGTACTCCCTC+CGG - chr1_1:10854547-10854566 Msa0007570:intron 35.0%
!! CAATTTCTGAGACGAAAAAG+AGG + chr1_1:10854823-10854842 None:intergenic 35.0%
TTGAAATGTTAGCCAACAGA+AGG - chr1_1:10854946-10854965 Msa0007570:intron 35.0%
TGAAATGTTAGCCAACAGAA+GGG - chr1_1:10854947-10854966 Msa0007570:intron 35.0%
!! AGAGACTAACTTGTTCTTGT+TGG - chr1_1:10855040-10855059 Msa0007570:intron 35.0%
! GCTTTTCTATGGATAGAGAA+AGG + chr1_1:10855075-10855094 None:intergenic 35.0%
ATCAAGTAAGCACAGAAGTT+CGG + chr1_1:10855145-10855164 None:intergenic 35.0%
GATGTATGAAAATGGGAAAC+AGG - chr1_1:10855162-10855181 Msa0007570:intron 35.0%
!! TCAAAGCTCTAGATACTGAA+TGG - chr1_1:10855190-10855209 Msa0007570:intron 35.0%
CATGATCCTAACTTCAATTC+AGG + chr1_1:10855237-10855256 None:intergenic 35.0%
CTGAATTGAAGTTAGGATCA+TGG - chr1_1:10855235-10855254 Msa0007570:intron 35.0%
TTGAAGTTAGGATCATGGAA+AGG - chr1_1:10855240-10855259 Msa0007570:intron 35.0%
AAAAACAAACAGTGAACCTC+TGG + chr1_1:10855340-10855359 None:intergenic 35.0%
! CTTGCCAGAATTTTCATGAA+AGG + chr1_1:10855396-10855415 None:intergenic 35.0%
ATTCTGGCAAGTTTGTAACT+TGG - chr1_1:10855405-10855424 Msa0007570:intron 35.0%
TTGTCTCAAAATGCACTAGT+AGG - chr1_1:10855526-10855545 Msa0007570:CDS 35.0%
TGTCTCAAAATGCACTAGTA+GGG - chr1_1:10855527-10855546 Msa0007570:CDS 35.0%
!!! ATAAGCTGTTTTTACGGCGA+GGG + chr1_1:10851058-10851077 None:intergenic 40.0%
AGAGAAGCTACGAGATCATT+AGG + chr1_1:10851128-10851147 None:intergenic 40.0%
CGTAGCTTCTCTTCTTTCAA+AGG - chr1_1:10851136-10851155 Msa0007570:three_prime_UTR 40.0%
!!! TTTTTTAACACCAGTGCTCC+GGG + chr1_1:10851610-10851629 None:intergenic 40.0%
!!! CTTTTTTAACACCAGTGCTC+CGG + chr1_1:10851611-10851630 None:intergenic 40.0%
TACTATTGGCATAATGCCTC+TGG - chr1_1:10851923-10851942 Msa0007570:intron 40.0%
! CATAATGCCTCTGGTGTTTT+CGG - chr1_1:10851932-10851951 Msa0007570:intron 40.0%
CAAAATACTGCTCAAGTCGA+AGG - chr1_1:10851960-10851979 Msa0007570:intron 40.0%
!! ATCATTGGTCTTACTCTGTC+CGG + chr1_1:10851996-10852015 None:intergenic 40.0%
TGTTCTATGGGATAGAGTGT+TGG - chr1_1:10852015-10852034 Msa0007570:intron 40.0%
! GTTCTATGGGATAGAGTGTT+GGG - chr1_1:10852016-10852035 Msa0007570:intron 40.0%
GAAAATAGACTGGGATGGTT+TGG - chr1_1:10852185-10852204 Msa0007570:intron 40.0%
AGTTAGATCACTAGAGGTAG+AGG - chr1_1:10852266-10852285 Msa0007570:intron 40.0%
!!! CCAAGTTTTTTCCCACTAAG+TGG + chr1_1:10852398-10852417 None:intergenic 40.0%
CCACTTAGTGGGAAAAAACT+TGG - chr1_1:10852395-10852414 Msa0007570:CDS 40.0%
CAACCGATGCACAAATAAAC+AGG - chr1_1:10852443-10852462 Msa0007570:CDS 40.0%
CTCCCTGTTTATTTGTGCAT+CGG + chr1_1:10852449-10852468 None:intergenic 40.0%
GATGCACAAATAAACAGGGA+GGG - chr1_1:10852448-10852467 Msa0007570:CDS 40.0%
ATGCACAAATAAACAGGGAG+GGG - chr1_1:10852449-10852468 Msa0007570:CDS 40.0%
TAGTAGTGGTTAGCACTACT+GGG + chr1_1:10852519-10852538 None:intergenic 40.0%
TGCTAACCACTACTACAACA+CGG - chr1_1:10852524-10852543 Msa0007570:intron 40.0%
TTTCTTACACGGTCCTTGTT+TGG - chr1_1:10852589-10852608 Msa0007570:intron 40.0%
GTTTGCACCACCTGATTAAA+AGG + chr1_1:10852998-10853017 None:intergenic 40.0%
! TGGAGGAGTTTTACTGCAAA+AGG - chr1_1:10853021-10853040 Msa0007570:intron 40.0%
GCAAAAGGAAGAACACAAAG+AGG - chr1_1:10853036-10853055 Msa0007570:intron 40.0%
AAAGGAAGAACACAAAGAGG+TGG - chr1_1:10853039-10853058 Msa0007570:intron 40.0%
AATATGCAGATAGGCTGGTA+GGG + chr1_1:10853197-10853216 None:intergenic 40.0%
AAATATGCAGATAGGCTGGT+AGG + chr1_1:10853198-10853217 None:intergenic 40.0%
ACGTCCTTATGCTAGTAGAT+AGG - chr1_1:10853421-10853440 Msa0007570:intron 40.0%
TGAGCCTATCTACTAGCATA+AGG + chr1_1:10853428-10853447 None:intergenic 40.0%
ACATCCTGTGAATGGTTACT+TGG - chr1_1:10853868-10853887 Msa0007570:intron 40.0%
TTACTTGGCCTAGTAATCTG+TGG - chr1_1:10853883-10853902 Msa0007570:intron 40.0%
! GCCTAGTAATCTGTGGTTTT+TGG - chr1_1:10853890-10853909 Msa0007570:intron 40.0%
GCCAAAAACCACAGATTACT+AGG + chr1_1:10853894-10853913 None:intergenic 40.0%
TGTCAGTATGTTGAACAAGG+AGG + chr1_1:10854031-10854050 None:intergenic 40.0%
GACAAAATTGCTTTCCAGAG+TGG - chr1_1:10854047-10854066 Msa0007570:intron 40.0%
GATGGAGAGGTTTCTCTAAA+AGG - chr1_1:10854223-10854242 Msa0007570:intron 40.0%
GTCAAAGATACGAATTACGG+TGG + chr1_1:10854291-10854310 None:intergenic 40.0%
GGGGTCAAAGATACGAATTA+CGG + chr1_1:10854294-10854313 None:intergenic 40.0%
! TTGATGATCAGTCCCATAAC+GGG + chr1_1:10854360-10854379 None:intergenic 40.0%
! AAACTCGGGTTCTTTTCCTA+GGG - chr1_1:10854449-10854468 Msa0007570:intron 40.0%
TCTCCAACCAACATGTTGTT+GGG + chr1_1:10854496-10854515 None:intergenic 40.0%
ATCTCCAACCAACATGTTGT+TGG + chr1_1:10854497-10854516 None:intergenic 40.0%
! CAACATGTTGGTTGGAGATA+TGG - chr1_1:10854498-10854517 Msa0007570:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_1:10854682-10854701 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_1:10854681-10854700 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_1:10854681-10854700 Msa0007570:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_1:10854682-10854701 Msa0007570:intron 40.0%
TCATTACATAGTACTCCCTC+CGG + chr1_1:10854700-10854719 None:intergenic 40.0%
!! GTCATTTTAGTCCCTTCTGT+TGG + chr1_1:10854961-10854980 None:intergenic 40.0%
GGATCATGGAAAGGACAATA+TGG - chr1_1:10855249-10855268 Msa0007570:intron 40.0%
TCATGGAAAGGACAATATGG+AGG - chr1_1:10855252-10855271 Msa0007570:intron 40.0%
!! TGTTTTTACGGCGAGGGAAA+CGG + chr1_1:10851052-10851071 None:intergenic 45.0%
!!! CATAAGCTGTTTTTACGGCG+AGG + chr1_1:10851059-10851078 None:intergenic 45.0%
CGAGATCATTAGGACCTGTT+CGG + chr1_1:10851118-10851137 None:intergenic 45.0%
AGAGAAGGGAAATGCTAACC+CGG - chr1_1:10851589-10851608 Msa0007570:intron 45.0%
!! CGGAGCACTGGTGTTAAAAA+AGG - chr1_1:10851609-10851628 Msa0007570:intron 45.0%
TGTATCACCGAAAACACCAG+AGG + chr1_1:10851942-10851961 None:intergenic 45.0%
! AGTCGAAGGGTCAATTTTGC+CGG - chr1_1:10851974-10851993 Msa0007570:intron 45.0%
CAAAGACGAAGATGTTGCGT+TGG - chr1_1:10852075-10852094 Msa0007570:intron 45.0%
TGGTGGAAAATAGACTGGGA+TGG - chr1_1:10852180-10852199 Msa0007570:intron 45.0%
ACTAAGTGGGGTTGACTACA+TGG + chr1_1:10852384-10852403 None:intergenic 45.0%
ATGTAGTCAACCCCACTTAG+TGG - chr1_1:10852383-10852402 Msa0007570:intron 45.0%
TGTAGTCAACCCCACTTAGT+GGG - chr1_1:10852384-10852403 Msa0007570:intron 45.0%
CGATGCACAAATAAACAGGG+AGG - chr1_1:10852447-10852466 Msa0007570:CDS 45.0%
TGCACAAATAAACAGGGAGG+GGG - chr1_1:10852450-10852469 Msa0007570:CDS 45.0%
GTAGTAGTGGTTAGCACTAC+TGG + chr1_1:10852520-10852539 None:intergenic 45.0%
GCTAACCACTACTACAACAC+GGG - chr1_1:10852525-10852544 Msa0007570:intron 45.0%
CTAACCACTACTACAACACG+GGG - chr1_1:10852526-10852545 Msa0007570:intron 45.0%
TAACCACTACTACAACACGG+GGG - chr1_1:10852527-10852546 Msa0007570:intron 45.0%
AATCAGGTGGTGCAAACAGA+TGG - chr1_1:10853001-10853020 Msa0007570:intron 45.0%
!! GAAGTATTGTGTGAAGGAGC+CGG - chr1_1:10853084-10853103 Msa0007570:intron 45.0%
ATATGCAGATAGGCTGGTAG+GGG + chr1_1:10853196-10853215 None:intergenic 45.0%
TACATCATGCAGAGCATGTG+TGG + chr1_1:10853743-10853762 None:intergenic 45.0%
TAGGCCAAGTAACCATTCAC+AGG + chr1_1:10853875-10853894 None:intergenic 45.0%
TCGTATCTTTGACCCCCATT+AGG - chr1_1:10854298-10854317 Msa0007570:intron 45.0%
! ACTGCTAGAGTCGTCCTTTT+GGG + chr1_1:10854428-10854447 None:intergenic 45.0%
ACGACTCTAGCAGTCAAACT+CGG - chr1_1:10854434-10854453 Msa0007570:intron 45.0%
! CAAACTCGGGTTCTTTTCCT+AGG - chr1_1:10854448-10854467 Msa0007570:intron 45.0%
! AACTCGGGTTCTTTTCCTAG+GGG - chr1_1:10854450-10854469 Msa0007570:intron 45.0%
TGACAATATGACTCTCCCCT+AGG + chr1_1:10854468-10854487 None:intergenic 45.0%
CAACTCTCCCAACAACATGT+TGG - chr1_1:10854486-10854505 Msa0007570:intron 45.0%
TCTCCCAACAACATGTTGGT+TGG - chr1_1:10854490-10854509 Msa0007570:intron 45.0%
! GAAGCGCCTGAATTGAAGTT+AGG - chr1_1:10855228-10855247 Msa0007570:intron 45.0%
TCCAAGACATCATTACCCCT+TGG - chr1_1:10855494-10855513 Msa0007570:CDS 45.0%
!!! ATTTTAAGTATTTAATTATA+GGG - chr1_1:10854917-10854936 Msa0007570:intron 5.0%
!!! AGATTATAATTATTTAATTT+AGG - chr1_1:10855619-10855638 Msa0007570:CDS 5.0%
!!! GATTATAATTATTTAATTTA+GGG - chr1_1:10855620-10855639 Msa0007570:CDS 5.0%
AGCATAAGCTGCAGCCATGA+GGG + chr1_1:10850943-10850962 None:intergenic 50.0%
AAGCATAAGCTGCAGCCATG+AGG + chr1_1:10850944-10850963 None:intergenic 50.0%
TCTAACACGGATGTCCGAAC+AGG - chr1_1:10851101-10851120 Msa0007570:three_prime_UTR 50.0%
!!! CTTTTTTGGCATTCGGTGCC+CGG - chr1_1:10851719-10851738 Msa0007570:intron 50.0%
!!! TTTTTTGGCATTCGGTGCCC+GGG - chr1_1:10851720-10851739 Msa0007570:intron 50.0%
!! CTATGGGATAGAGTGTTGGG+CGG - chr1_1:10852019-10852038 Msa0007570:intron 50.0%
CAAATAAACAGGGAGGGGGA+AGG - chr1_1:10852454-10852473 Msa0007570:CDS 50.0%
!! GGACATGAGCATTGGTGTGT+GGG + chr1_1:10852498-10852517 None:intergenic 50.0%
CACTACTGGGACATGAGCAT+TGG + chr1_1:10852506-10852525 None:intergenic 50.0%
AGAGGTGGCTGAAGTAGTTC+AGG - chr1_1:10853054-10853073 Msa0007570:intron 50.0%
TTGCTTTCCAGAGTGGGATG+TGG - chr1_1:10854054-10854073 Msa0007570:intron 50.0%
TGTTCACAGCCAACATCACC+TGG - chr1_1:10854082-10854101 Msa0007570:intron 50.0%
ATACCTTCGGACGCCTAATG+GGG + chr1_1:10854314-10854333 None:intergenic 50.0%
GATACCTTCGGACGCCTAAT+GGG + chr1_1:10854315-10854334 None:intergenic 50.0%
GTAAGCCATGGGGATACCTT+CGG + chr1_1:10854327-10854346 None:intergenic 50.0%
AGGTTGGGATACCTCCCAAA+AGG - chr1_1:10854411-10854430 Msa0007570:intron 50.0%
! GACTGCTAGAGTCGTCCTTT+TGG + chr1_1:10854429-10854448 None:intergenic 50.0%
CGACTCTAGCAGTCAAACTC+GGG - chr1_1:10854435-10854454 Msa0007570:intron 50.0%
AGGTTAGGATTGGGATCCAG+AGG - chr1_1:10855321-10855340 Msa0007570:intron 50.0%
GCCAAGGGGTAATGATGTCT+TGG + chr1_1:10855498-10855517 None:intergenic 50.0%
AGACAAACTCTGCAGCCAAG+GGG + chr1_1:10855512-10855531 None:intergenic 50.0%
GAGACAAACTCTGCAGCCAA+GGG + chr1_1:10855513-10855532 None:intergenic 50.0%
TGAGACAAACTCTGCAGCCA+AGG + chr1_1:10855514-10855533 None:intergenic 50.0%
GTACAGTGAGCACACCCTCA+TGG - chr1_1:10850926-10850945 Msa0007570:three_prime_UTR 55.0%
GAAATGCTAACCCGGAGCAC+TGG - chr1_1:10851597-10851616 Msa0007570:intron 55.0%
!! CGGGCACCGAATGCCAAAAA+AGG + chr1_1:10851721-10851740 None:intergenic 55.0%
!!! TTTTTGGCATTCGGTGCCCG+GGG - chr1_1:10851721-10851740 Msa0007570:intron 55.0%
ATAAACAGGGAGGGGGAAGG+AGG - chr1_1:10852457-10852476 Msa0007570:CDS 55.0%
!! GGGACATGAGCATTGGTGTG+TGG + chr1_1:10852499-10852518 None:intergenic 55.0%
AACACGGGGGACGATGACTA+TGG - chr1_1:10852540-10852559 Msa0007570:intron 55.0%
CAGGTGGTGCAAACAGATGG+AGG - chr1_1:10853004-10853023 Msa0007570:intron 55.0%
CAGTACACCACATCCCACTC+TGG + chr1_1:10854064-10854083 None:intergenic 55.0%
TCACAGCCAACATCACCTGG+AGG - chr1_1:10854085-10854104 Msa0007570:intron 55.0%
AGCCAACATCACCTGGAGGT+GGG - chr1_1:10854089-10854108 Msa0007570:intron 55.0%
TACCCACCTCCAGGTGATGT+TGG + chr1_1:10854094-10854113 None:intergenic 55.0%
CATCACCTGGAGGTGGGTAT+CGG - chr1_1:10854095-10854114 Msa0007570:intron 55.0%
!! AGGTGGGTATCGGAGTGCAT+TGG - chr1_1:10854105-10854124 Msa0007570:intron 55.0%
!! GGTGGGTATCGGAGTGCATT+GGG - chr1_1:10854106-10854125 Msa0007570:intron 55.0%
TACCTTCGGACGCCTAATGG+GGG + chr1_1:10854313-10854332 None:intergenic 55.0%
GGATACCTTCGGACGCCTAA+TGG + chr1_1:10854316-10854335 None:intergenic 55.0%
TCCAGAGGGAGTAAGCCATG+GGG + chr1_1:10854337-10854356 None:intergenic 55.0%
GTCCAGAGGGAGTAAGCCAT+GGG + chr1_1:10854338-10854357 None:intergenic 55.0%
TACTCCCTCTGGACCCGTTA+TGG - chr1_1:10854344-10854363 Msa0007570:intron 55.0%
ACTCCCTCTGGACCCGTTAT+GGG - chr1_1:10854345-10854364 Msa0007570:intron 55.0%
!! AGTCCCATAACGGGTCCAGA+GGG + chr1_1:10854351-10854370 None:intergenic 55.0%
! GCTAGAGTCGTCCTTTTGGG+AGG + chr1_1:10854425-10854444 None:intergenic 55.0%
AGGGTCATGCTAACCGCCAC+CGG + chr1_1:10851749-10851768 None:intergenic 60.0%
! GAGGGGGAAGGAGGTGTAGT+GGG - chr1_1:10852466-10852485 Msa0007570:CDS 60.0%
CGTCCCCCGTGTTGTAGTAG+TGG + chr1_1:10852533-10852552 None:intergenic 60.0%
CAGCCAACATCACCTGGAGG+TGG - chr1_1:10854088-10854107 Msa0007570:intron 60.0%
TCCCCATGGCTTACTCCCTC+TGG - chr1_1:10854333-10854352 Msa0007570:intron 60.0%
GGTCCAGAGGGAGTAAGCCA+TGG + chr1_1:10854339-10854358 None:intergenic 60.0%
!! CAGTCCCATAACGGGTCCAG+AGG + chr1_1:10854352-10854371 None:intergenic 60.0%
! GGAGGGGGAAGGAGGTGTAG+TGG - chr1_1:10852465-10852484 Msa0007570:CDS 65.0%
GCACTCCGATACCCACCTCC+AGG + chr1_1:10854103-10854122 None:intergenic 65.0%
GACCCCCATTAGGCGTCCGA+AGG - chr1_1:10854308-10854327 Msa0007570:intron 65.0%
!! GGCGTCCGAAGGTATCCCCA+TGG - chr1_1:10854319-10854338 Msa0007570:intron 65.0%
!! GCATTCGGTGCCCGGGGCAC+CGG - chr1_1:10851727-10851746 Msa0007570:intron 75.0%
CTAACCGCCACCGGTGCCCC+GGG + chr1_1:10851740-10851759 None:intergenic 75.0%
GCTAACCGCCACCGGTGCCC+CGG + chr1_1:10851741-10851760 None:intergenic 75.0%
!!! TTCGGTGCCCGGGGCACCGG+TGG - chr1_1:10851730-10851749 Msa0007570:intron 80.0%
!!! GGTGCCCGGGGCACCGGTGG+CGG - chr1_1:10851733-10851752 Msa0007570:intron 85.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 10850875 10855726 10850875 ID=Msa0007570;Name=Msa0007570
chr1_1 mRNA 10850875 10855726 10850875 ID=Msa0007570-mRNA-1;Parent=Msa0007570;Name=Msa0007570-mRNA-1;_AED=0.02;_eAED=0.02;_QI=70|0.66|0.75|1|1|1|4|355|224
chr1_1 exon 10850875 10851417 10850875 ID=Msa0007570-mRNA-1:exon:3992;Parent=Msa0007570-mRNA-1
chr1_1 exon 10852387 10852536 10852387 ID=Msa0007570-mRNA-1:exon:3991;Parent=Msa0007570-mRNA-1
chr1_1 exon 10853471 10853594 10853471 ID=Msa0007570-mRNA-1:exon:3990;Parent=Msa0007570-mRNA-1
chr1_1 exon 10855444 10855726 10855444 ID=Msa0007570-mRNA-1:exon:3989;Parent=Msa0007570-mRNA-1
chr1_1 five_prime_UTR 10855657 10855726 10855657 ID=Msa0007570-mRNA-1:five_prime_utr;Parent=Msa0007570-mRNA-1
chr1_1 CDS 10855444 10855656 10855444 ID=Msa0007570-mRNA-1:cds;Parent=Msa0007570-mRNA-1
chr1_1 CDS 10853471 10853594 10853471 ID=Msa0007570-mRNA-1:cds;Parent=Msa0007570-mRNA-1
chr1_1 CDS 10852387 10852536 10852387 ID=Msa0007570-mRNA-1:cds;Parent=Msa0007570-mRNA-1
chr1_1 CDS 10851230 10851417 10851230 ID=Msa0007570-mRNA-1:cds;Parent=Msa0007570-mRNA-1
chr1_1 three_prime_UTR 10850875 10851229 10850875 ID=Msa0007570-mRNA-1:three_prime_utr;Parent=Msa0007570-mRNA-1
Gene Sequence

>Msa0007570

ATGGCTGCAGCTTATGCTTCTGCGTTTCGCTTAGTACAATCTTCATTCGAATTCAGAAGCCATAATAATAATAATAACTTTCCAACATCCAAATCATTTAACATCCGTTTCCCTCGCCGTAAAAACAGCTTATGCGTTTCCGCTTCCGTTTCTATTTCTAACACGGATGTCCGAACAGGTCCTAATGATCTCGTAGCTTCTCTTCTTTCAAAGGTGGTGCAAACAGATGGAGGAGTTTTACTGCAAAAGGAAGAACACAAAGAGGTGGCTGAAGTAGTTCAGGAATTGCAGAAGTATTGTGTGAAGGAGCCGGTGAAATGCCCTTTAATATTTGGAGAGTGGGATGTGGTGTACTGTTCACAGCCAACATCACCTGGAGGTGGGTATCGGAGTGCATTGGGCAGAGTTTTTTTCAAAACAAAGGAAATGGTTCAGGTTGTTGAAGCTCCTGATGTTGTGAGAAACAAAATCGCATTTACTGCTTTAGGAACACTCAAAGCTCTAGATACTGAATGGATTCAAGTTGTATTTGAAGCGCCTGAATTGAAGTTAGGATCATGGAAAGGACAATATGGAGGTCAGAGTGAAGTTAAACTCCGAATCACTTATGTAGATGAAAAAATCAGGTTAGGATTGGGATCCAGAGGTTCACTGTTTGTTTTTCGAAGAATATGA

Protein sequence

>Msa0007570

MAAAYASAFRLVQSSFEFRSHNNNNNFPTSKSFNIRFPRRKNSLCVSASVSISNTDVRTGPNDLVASLLSKVVQTDGGVLLQKEEHKEVAEVVQELQKYCVKEPVKCPLIFGEWDVVYCSQPTSPGGGYRSALGRVFFKTKEMVQVVEAPDVVRNKIAFTALGTLKALDTEWIQVVFEAPELKLGSWKGQYGGQSEVKLRITYVDEKIRLGLGSRGSLFVFRRI*