AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0949550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0949550 MtrunA17_Chr4g0061511 95.128 390 18 1 2 391 3 391 0.0 769
Msa0949550 MtrunA17_Chr5g0445151 27.864 323 194 14 44 355 37 331 6.40e-18 85.9
Msa0949550 MtrunA17_Chr5g0445151 23.313 326 216 9 47 364 358 657 1.62e-16 81.6
Msa0949550 MtrunA17_Chr3g0100611 25.228 329 210 12 37 355 29 331 2.95e-15 77.8
Msa0949550 MtrunA17_Chr3g0100611 22.186 311 208 8 51 355 362 644 4.52e-13 70.9
Msa0949550 MtrunA17_Chr4g0074331 25.688 327 201 15 43 361 62 354 3.46e-14 74.3
Msa0949550 MtrunA17_Chr2g0304791 27.431 288 170 13 82 361 13 269 5.97e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0949550 AT1G74210.1 72.423 388 105 2 4 390 3 389 0.0 584
Msa0949550 AT5G08030.1 75.071 353 87 1 16 368 16 367 0.0 560
Msa0949550 AT5G08030.2 75.071 353 87 1 16 368 31 382 0.0 560
Msa0949550 AT4G26690.1 24.776 335 187 11 44 355 44 336 1.61e-17 85.1
Msa0949550 AT4G26690.1 22.601 323 204 10 47 355 363 653 7.51e-16 80.1
Msa0949550 AT1G66970.1 27.795 331 196 15 37 355 43 342 2.33e-16 81.6
Msa0949550 AT1G66970.1 23.659 317 209 10 47 355 369 660 4.23e-16 80.9
Msa0949550 AT3G20520.1 21.713 327 227 8 47 364 340 646 3.67e-16 80.9
Msa0949550 AT1G66970.3 23.602 322 203 11 47 355 175 466 4.77e-16 80.1
Msa0949550 AT1G66970.2 27.778 324 191 15 44 355 72 364 5.62e-16 80.5
Msa0949550 AT1G66970.2 23.101 316 212 9 47 355 391 682 6.21e-16 80.1
Msa0949550 AT5G55480.1 21.239 339 225 10 47 372 368 677 7.28e-16 80.1
Msa0949550 AT1G66980.1 23.292 322 203 8 47 355 372 662 6.75e-13 70.9
Msa0949550 AT1G66980.2 23.292 322 203 8 47 355 401 691 7.83e-13 70.9
Msa0949550 AT1G66980.4 23.529 323 201 10 47 355 355 645 7.88e-13 70.9
Msa0949550 AT1G66980.3 23.292 322 203 8 47 355 372 662 8.11e-13 70.9

Find 99 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCTATGTGCAACGTTATA+TGG 0.136452 6_3:+36186017 None:intergenic
TGCAGTTGATTTCACATTAA+AGG 0.140506 6_3:-36185099 Msa0949550:intron
TCGTTGCTTGCCGCGGAAAT+AGG 0.171136 6_3:+36187777 None:intergenic
TGAATCAGAGGTTCTGCTTT+AGG 0.244144 6_3:-36185058 Msa0949550:CDS
GTTGAAACACTTCGGAAATA+TGG 0.255128 6_3:-36184543 Msa0949550:CDS
TGATTACTGGATCAACAAAA+TGG 0.274727 6_3:-36183865 Msa0949550:CDS
AAGCAATATGTTGTAGGAAT+TGG 0.302113 6_3:-36184141 Msa0949550:CDS
TTGTGAATATATAAATAATA+AGG 0.306882 6_3:-36183443 Msa0949550:three_prime_UTR
GTATCGTAGGAACGTGAAAA+TGG 0.309244 6_3:+36187741 None:intergenic
TCATCGATTAATAAAATCTT+AGG 0.311423 6_3:+36184417 None:intergenic
CAATCTATATTGATTGGAAT+TGG 0.313318 6_3:-36183497 Msa0949550:three_prime_UTR
TATCTCAATGTCTTCGTTAT+CGG 0.318763 6_3:-36187649 Msa0949550:exon
TATGCGTCGCGAGTTTCTTC+AGG 0.321203 6_3:+36185978 None:intergenic
AGAAACTCGCGACGCATATC+TGG 0.327755 6_3:-36185973 Msa0949550:intron
GAATCAGAGGTTCTGCTTTA+GGG 0.329665 6_3:-36185057 Msa0949550:CDS
ACATATAAGAACACCATCTT+TGG 0.329743 6_3:+36185696 None:intergenic
TCTTGTCATCTTGACGGTTA+GGG 0.364460 6_3:+36183781 None:intergenic
ATCTCAATGTCTTCGTTATC+GGG 0.369178 6_3:-36187648 Msa0949550:intron
GTCTTGTCATCTTGACGGTT+AGG 0.371938 6_3:+36183780 None:intergenic
CTTACAAGGAGTATGATTAC+TGG 0.378731 6_3:-36183878 Msa0949550:CDS
ATGATTATGTGCAGTCATAT+TGG 0.381861 6_3:-36184197 Msa0949550:intron
AATAGCCAATCTATATTGAT+TGG 0.386554 6_3:-36183503 Msa0949550:three_prime_UTR
AGGCCTTTGTATCCACTTCC+TGG 0.386639 6_3:-36186083 Msa0949550:CDS
TTATTTAATTAGATTGTCAT+AGG 0.388500 6_3:+36183566 None:intergenic
CCCATATAACGTTGCACATA+GGG 0.394571 6_3:-36186018 Msa0949550:CDS
CTCCTTCGGATCTTGTTGCC+AGG 0.400869 6_3:-36184068 Msa0949550:CDS
GATATATACACAAGTGAAGT+TGG 0.401531 6_3:+36184456 None:intergenic
TGATTATGTGCAGTCATATT+GGG 0.403241 6_3:-36184196 Msa0949550:intron
ATCAACAAAATGGGAATTGA+TGG 0.404261 6_3:-36183855 Msa0949550:CDS
CGTTGCTTGCCGCGGAAATA+GGG 0.406739 6_3:+36187778 None:intergenic
GATATAAATAACAGGTGAAA+TGG 0.409069 6_3:-36184596 Msa0949550:intron
TTCAACACAAGACACTAATC+AGG 0.419403 6_3:-36184385 Msa0949550:intron
TAAAGTTGAAATGCAAATAC+TGG 0.423447 6_3:+36183910 None:intergenic
TTGGATGCACCCAGAGTTGT+TGG 0.424638 6_3:-36184809 Msa0949550:CDS
CCCTATGTGCAACGTTATAT+GGG 0.427804 6_3:+36186018 None:intergenic
AAATAAGAAATTAGTAATGT+TGG 0.432858 6_3:-36183536 Msa0949550:three_prime_UTR
TACATAAAGCAATATGTTGT+AGG 0.433660 6_3:-36184147 Msa0949550:CDS
ACATGTTGATTGATAAGTAC+TGG 0.437339 6_3:+36184764 None:intergenic
TTTAGGGATCAACAGTTTAA+CGG 0.438221 6_3:-36185041 Msa0949550:intron
TCCCAGTGAAATCTGTAAAC+AGG 0.445980 6_3:+36183832 None:intergenic
GTTGCACATAGGGGCTCAAA+TGG 0.451850 6_3:-36186008 Msa0949550:CDS
AGGATATATTCCAACAACTC+TGG 0.460634 6_3:+36184799 None:intergenic
CAGTAATCATACTCCTTGTA+AGG 0.464985 6_3:+36183879 None:intergenic
TACTCATTTCTGTACGTGTA+TGG 0.465833 6_3:+36183933 None:intergenic
CTTCCATGGTCACCTTTGCC+AGG 0.470270 6_3:+36186065 None:intergenic
GAAGAGGCTGCTTACTTCCA+TGG 0.474342 6_3:+36186051 None:intergenic
ATGCAGTCTTGTCATCTTGA+CGG 0.475282 6_3:+36183775 None:intergenic
CATATTGCTTTATGTAGTCT+AGG 0.476260 6_3:+36184154 None:intergenic
GTCGGACGGCAAACGATTTG+AGG 0.480583 6_3:-36184574 Msa0949550:CDS
AGAGTTCATTACCATAGCAT+TGG 0.485013 6_3:-36184828 Msa0949550:CDS
TGGTCACCTTTGCCAGGAAG+TGG 0.486182 6_3:+36186071 None:intergenic
GATTACTGGATCAACAAAAT+GGG 0.486674 6_3:-36183864 Msa0949550:CDS
CAATTCCAATCAATATAGAT+TGG 0.496883 6_3:+36183498 None:intergenic
GTCGAAGGGGTCAATACCAC+TGG 0.501774 6_3:-36185595 Msa0949550:CDS
GGCCTGTTTACAGATTTCAC+TGG 0.506585 6_3:-36183834 Msa0949550:CDS
CAAGTATGTGATGACTCCTT+CGG 0.509569 6_3:-36184082 Msa0949550:CDS
GATATATTATCTTCCAAAGA+TGG 0.509816 6_3:-36185709 Msa0949550:CDS
TGTGTATATATCAAATCAAA+CGG 0.510034 6_3:-36184445 Msa0949550:CDS
TTGTTAAGTCTTCGTATCGT+AGG 0.517971 6_3:+36187728 None:intergenic
GGATATATTCCAACAACTCT+GGG 0.526903 6_3:+36184800 None:intergenic
ACTTCGGAAATATGGATACA+AGG 0.529530 6_3:-36184535 Msa0949550:CDS
TCCTTCGGATCTTGTTGCCA+GGG 0.530863 6_3:-36184067 Msa0949550:CDS
CTTTAGTCAAGATCCTTACA+AGG 0.536799 6_3:-36183892 Msa0949550:CDS
CTTGTCATCTTGACGGTTAG+GGG 0.536985 6_3:+36183782 None:intergenic
GCCCATATAACGTTGCACAT+AGG 0.541427 6_3:-36186019 Msa0949550:CDS
GCCTGTTTACAGATTTCACT+GGG 0.542364 6_3:-36183833 Msa0949550:CDS
ATTAAAGTCGTTGCTTGCCG+CGG 0.544151 6_3:+36187770 None:intergenic
TTGTATCCACTTCCTGGCAA+AGG 0.547465 6_3:-36186077 Msa0949550:CDS
GGATACTATACTAGTACCTC+TGG 0.548713 6_3:-36184109 Msa0949550:CDS
GTTCATACCTGTCAAAACAT+TGG 0.548979 6_3:-36184512 Msa0949550:CDS
ACAAGTTTGTTGAAACACTT+CGG 0.549529 6_3:-36184551 Msa0949550:CDS
GGCACATGCTCATAATCTGC+AGG 0.551055 6_3:-36184046 Msa0949550:intron
TGTAAAACAAAGCATGTGCT+TGG 0.554173 6_3:-36183683 Msa0949550:three_prime_UTR
AAAAGAACATATGAAGTCGA+AGG 0.561446 6_3:-36185610 Msa0949550:CDS
GCTGTGTTCCTCACTCACTC+AGG 0.561455 6_3:+36187702 None:intergenic
TTGCAGAGAGCTATTGAGGA+AGG 0.565109 6_3:-36185751 Msa0949550:intron
AAAGAACATATGAAGTCGAA+GGG 0.565876 6_3:-36185609 Msa0949550:CDS
TAAATAACAGGTGAAATGGT+CGG 0.572543 6_3:-36184592 Msa0949550:intron
TCTGGGTGCATCCAATGCTA+TGG 0.574074 6_3:+36184817 None:intergenic
TGTAGGAATTGGACCTTCGA+AGG 0.578743 6_3:-36184130 Msa0949550:CDS
CAGATTATGAGCATGTGCCC+TGG 0.581110 6_3:+36184050 None:intergenic
CTTCCTGGCAAAGGTGACCA+TGG 0.581158 6_3:-36186068 Msa0949550:CDS
AACAATGACCTGAGTGAGTG+AGG 0.601263 6_3:-36187710 Msa0949550:five_prime_UTR
GCAAATGACTGTATAAATGC+AGG 0.604021 6_3:+36184480 None:intergenic
TATGGGCGAAAAGTTTGAAG+AGG 0.612743 6_3:+36186035 None:intergenic
AGTCGCTGAGGGTGAATCAG+AGG 0.615291 6_3:-36185070 Msa0949550:CDS
AAAGGAATTAAAGTCGCTGA+GGG 0.619575 6_3:-36185081 Msa0949550:CDS
TAAAGGAATTAAAGTCGCTG+AGG 0.621868 6_3:-36185082 Msa0949550:CDS
CCATATAACGTTGCACATAG+GGG 0.625643 6_3:-36186017 Msa0949550:CDS
TTTCTATTGCTCGTGATTGG+GGG 0.629901 6_3:-36186113 Msa0949550:CDS
CTTCGGAAATATGGATACAA+GGG 0.630595 6_3:-36184534 Msa0949550:CDS
TAACAGGTGAAATGGTCGGA+CGG 0.639574 6_3:-36184588 Msa0949550:intron
GCCCTGGCAACAAGATCCGA+AGG 0.642209 6_3:+36184066 None:intergenic
TAATGTGGACCCTATTTCCG+CGG 0.648966 6_3:-36187787 Msa0949550:five_prime_UTR
ACTAGTATAGTATCCTTCGA+AGG 0.650372 6_3:+36184117 None:intergenic
TTGCCAGGAAGTGGATACAA+AGG 0.653361 6_3:+36186080 None:intergenic
TATTATCAAGAATAAAGTCG+TGG 0.657370 6_3:+36185671 None:intergenic
ATCACATACTTGTTAACCAG+AGG 0.666472 6_3:+36184093 None:intergenic
AAGAACATATGAAGTCGAAG+GGG 0.698335 6_3:-36185608 Msa0949550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATAAATATATATAT+AGG - chr6_3:36183891-36183910 Msa0949550:CDS 0.0%
!! TATATATAAATATATATATA+GGG - chr6_3:36183892-36183911 Msa0949550:CDS 0.0%
!! ATATATATATATATATATAT+AGG - chr6_3:36184086-36184105 Msa0949550:CDS 0.0%
!! TATATATATATATATATATA+GGG - chr6_3:36184085-36184104 Msa0949550:CDS 0.0%
!! TATATATATATATATATATA+TGG + chr6_3:36184085-36184104 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr6_3:36184086-36184105 Msa0949550:CDS 0.0%
!! TATATATATATATATATATA+GGG - chr6_3:36184085-36184104 Msa0949550:CDS 0.0%
!! TATATAAATATATATATAGG+GGG - chr6_3:36183894-36183913 Msa0949550:CDS 10.0%
!! CTAAAATTAACTTAAAATTA+GGG + chr6_3:36184221-36184240 None:intergenic 10.0%
!! ACTAAAATTAACTTAAAATT+AGG + chr6_3:36184222-36184241 None:intergenic 10.0%
!!! ATGAATTTTTATATTTTTGA+TGG + chr6_3:36184349-36184368 None:intergenic 10.0%
!! TATATATATATATATACATG+GGG + chr6_3:36184915-36184934 None:intergenic 10.0%
!! TATATATATATATATATAGC+TGG - chr6_3:36184919-36184938 Msa0949550:intron 10.0%
!!! AAAAAACAAATATCATTTTT+AGG + chr6_3:36185457-36185476 None:intergenic 10.0%
!! ATTAAATTGATATAAATAAC+AGG - chr6_3:36186622-36186641 Msa0949550:intron 10.0%
!! TTGTGAATATATAAATAATA+AGG - chr6_3:36187783-36187802 Msa0949550:five_prime_UTR 10.0%
!! TTAAATAGTTATACTTAAGT+AGG - chr6_3:36183997-36184016 Msa0949550:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr6_3:36184190-36184209 None:intergenic 15.0%
!!! ATAGTGATTGAAAATTTTAT+AGG + chr6_3:36184191-36184210 None:intergenic 15.0%
!!! AAATTTTCAATCACTATTTT+TGG - chr6_3:36184194-36184213 Msa0949550:intron 15.0%
!!! TATATGGTTAAATATGTTTT+TGG + chr6_3:36184591-36184610 None:intergenic 15.0%
!! TGTTTATAATAGAAAAACAT+GGG + chr6_3:36184750-36184769 None:intergenic 15.0%
!! TTGTTTATAATAGAAAAACA+TGG + chr6_3:36184751-36184770 None:intergenic 15.0%
!! GAATATATTTAAAAAGAGAA+AGG + chr6_3:36185313-36185332 None:intergenic 15.0%
!!! TTTATGAATATATTTTACGA+AGG + chr6_3:36185707-36185726 None:intergenic 15.0%
!! TTATTTAATTAGATTGTCAT+AGG + chr6_3:36187663-36187682 None:intergenic 15.0%
!! AAATAAGAAATTAGTAATGT+TGG - chr6_3:36187690-36187709 Msa0949550:five_prime_UTR 15.0%
!! AACAAGTGAAAAATAAATGA+AGG + chr6_3:36183805-36183824 None:intergenic 20.0%
!!! TATAGGGTTAAATATGTTTT+TGG - chr6_3:36184103-36184122 Msa0949550:CDS 20.0%
!! ATATGAGTTTACATTAAAAG+AGG - chr6_3:36184472-36184491 Msa0949550:CDS 20.0%
!! TATGAGTTTACATTAAAAGA+GGG - chr6_3:36184473-36184492 Msa0949550:CDS 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - chr6_3:36184564-36184583 Msa0949550:CDS 20.0%
!! TAAAAACACTAAAAACACTA+GGG - chr6_3:36184682-36184701 Msa0949550:intron 20.0%
!! TAAAGTTTAATAGAGACAAA+AGG - chr6_3:36184813-36184832 Msa0949550:CDS 20.0%
!! AAAGTTTAATAGAGACAAAA+GGG - chr6_3:36184814-36184833 Msa0949550:CDS 20.0%
!! TTAGTTAGTAAGTATGAAAA+TGG - chr6_3:36184963-36184982 Msa0949550:intron 20.0%
!! TAGTTAGTAAGTATGAAAAT+GGG - chr6_3:36184964-36184983 Msa0949550:intron 20.0%
!! ATTATGCATAAACTAGTATT+TGG - chr6_3:36185376-36185395 Msa0949550:intron 20.0%
!! AATGGTAACTCAATAAATTA+AGG + chr6_3:36185913-36185932 None:intergenic 20.0%
!!! TAGACGTATTTCTTAATTTT+AGG - chr6_3:36185943-36185962 Msa0949550:intron 20.0%
!!! AGACGTATTTCTTAATTTTA+GGG - chr6_3:36185944-36185963 Msa0949550:intron 20.0%
!! TGTGTATATATCAAATCAAA+CGG - chr6_3:36186781-36186800 Msa0949550:intron 20.0%
!!! TCATCGATTAATAAAATCTT+AGG + chr6_3:36186812-36186831 None:intergenic 20.0%
!! CAACATTGTATAACATTAAA+CGG + chr6_3:36186955-36186974 None:intergenic 20.0%
!!! CATTACAGTAAAATTTTGTT+AGG + chr6_3:36187012-36187031 None:intergenic 20.0%
! ATGAAAAGTGAAACATTTGA+AGG + chr6_3:36183679-36183698 None:intergenic 25.0%
!!! TCTGCTTTTATCACTAATTT+CGG - chr6_3:36183744-36183763 Msa0949550:CDS 25.0%
! AAATAAATGAAGGTAAGGTA+AGG + chr6_3:36183795-36183814 None:intergenic 25.0%
! GTGAAAAATAAATGAAGGTA+AGG + chr6_3:36183800-36183819 None:intergenic 25.0%
! ATTCTTATCATTCTCACATA+AGG + chr6_3:36183941-36183960 None:intergenic 25.0%
! TATATATACCTAGACCAAAA+AGG + chr6_3:36184073-36184092 None:intergenic 25.0%
!! AAATTTTCCATCTTCACTTT+TGG + chr6_3:36184500-36184519 None:intergenic 25.0%
!! AAGTGAAGATGGAAAATTTT+TGG - chr6_3:36184501-36184520 Msa0949550:CDS 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr6_3:36184532-36184551 Msa0949550:CDS 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr6_3:36184533-36184552 Msa0949550:CDS 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG - chr6_3:36184563-36184582 Msa0949550:CDS 25.0%
!!! CTAGTGTTTTTAGTGTTTTT+AGG + chr6_3:36184683-36184702 None:intergenic 25.0%
! CTAAAAACACTAAAAACACT+AGG - chr6_3:36184681-36184700 Msa0949550:intron 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG + chr6_3:36184727-36184746 None:intergenic 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG - chr6_3:36184837-36184856 Msa0949550:CDS 25.0%
! TCAAATCATAAATGTAACCT+AGG - chr6_3:36185074-36185093 Msa0949550:CDS 25.0%
! GATATATTATCTTCCAAAGA+TGG - chr6_3:36185517-36185536 Msa0949550:intron 25.0%
! TATTATCAAGAATAAAGTCG+TGG + chr6_3:36185558-36185577 None:intergenic 25.0%
!!! AAGACGTTTTATTTCTCAAT+AGG - chr6_3:36185971-36185990 Msa0949550:intron 25.0%
! AAAGAATGGAATAATGTTTC+TGG + chr6_3:36186041-36186060 None:intergenic 25.0%
!!! TGAACCATTTTAAAATCTGA+CGG + chr6_3:36186248-36186267 None:intergenic 25.0%
! ATTCATACAATAAGATTGGA+GGG + chr6_3:36186572-36186591 None:intergenic 25.0%
! TCACATTCATACAATAAGAT+TGG + chr6_3:36186576-36186595 None:intergenic 25.0%
! ATCTTATTGTATGAATGTGA+TGG - chr6_3:36186576-36186595 Msa0949550:intron 25.0%
! GATATAAATAACAGGTGAAA+TGG - chr6_3:36186630-36186649 Msa0949550:intron 25.0%
! ATCAATTTGTAGAAGAACAA+GGG + chr6_3:36186894-36186913 None:intergenic 25.0%
!! AGTAAAATTTTGTTAGGCTT+TGG + chr6_3:36187006-36187025 None:intergenic 25.0%
! TACATAAAGCAATATGTTGT+AGG - chr6_3:36187079-36187098 Msa0949550:intron 25.0%
!!! TAGCTCTAAAAACATATGAA+GGG + chr6_3:36187232-36187251 None:intergenic 25.0%
!!! ATAGCTCTAAAAACATATGA+AGG + chr6_3:36187233-36187252 None:intergenic 25.0%
! TAAAGTTGAAATGCAAATAC+TGG + chr6_3:36187319-36187338 None:intergenic 25.0%
!! AGCAATTTTATGTAATAGCT+CGG + chr6_3:36187477-36187496 None:intergenic 25.0%
!!! TGCTTATGAATGATTTTTTG+AGG - chr6_3:36187508-36187527 Msa0949550:intron 25.0%
! AATAGCCAATCTATATTGAT+TGG - chr6_3:36187723-36187742 Msa0949550:five_prime_UTR 25.0%
! CAATTCCAATCAATATAGAT+TGG + chr6_3:36187731-36187750 None:intergenic 25.0%
!! CAATCTATATTGATTGGAAT+TGG - chr6_3:36187729-36187748 Msa0949550:five_prime_UTR 25.0%
TATCTCAATGTCTTCGTTAT+CGG - chr6_3:36183577-36183596 Msa0949550:three_prime_UTR 30.0%
TGAATCTATCTAAGTTATGC+AGG - chr6_3:36183621-36183640 Msa0949550:intron 30.0%
AGCCATTGGATTAAAATAGA+TGG - chr6_3:36183968-36183987 Msa0949550:intron 30.0%
!!! AGCCATCTATTTTAATCCAA+TGG + chr6_3:36183973-36183992 None:intergenic 30.0%
! CCAAAAAGGATTTTGAATGA+GGG + chr6_3:36184059-36184078 None:intergenic 30.0%
! ACCAAAAAGGATTTTGAATG+AGG + chr6_3:36184060-36184079 None:intergenic 30.0%
!! TTCAAAATCCTTTTTGGTCT+AGG - chr6_3:36184062-36184081 Msa0949550:CDS 30.0%
! AGTTGAACGAAGATTTTAGA+GGG + chr6_3:36184161-36184180 None:intergenic 30.0%
! AAGTTGAACGAAGATTTTAG+AGG + chr6_3:36184162-36184181 None:intergenic 30.0%
!! TGAAGATGGAAAATTTTTGG+AGG - chr6_3:36184504-36184523 Msa0949550:CDS 30.0%
!!! GTGTTTTTAGTGTTTTTAGG+TGG + chr6_3:36184680-36184699 None:intergenic 30.0%
! ATAGAAAAACATGGGTGTTT+TGG + chr6_3:36184742-36184761 None:intergenic 30.0%
! TATATAGCTGGCTTATTATC+AGG - chr6_3:36184931-36184950 Msa0949550:intron 30.0%
TAGTAAGTATGAAAATGGGT+TGG - chr6_3:36184968-36184987 Msa0949550:intron 30.0%
ATGATTTGATACACCAAGTT+AGG + chr6_3:36185063-36185082 None:intergenic 30.0%
ACGAGCAATAGAAAAACAAA+AGG + chr6_3:36185107-36185126 None:intergenic 30.0%
! TTTTTCTATTGCTCGTGATT+GGG - chr6_3:36185111-36185130 Msa0949550:intron 30.0%
GTTTATGCATAATTGTAGCA+TGG + chr6_3:36185369-36185388 None:intergenic 30.0%
!! ATTGACGTCATTTTCAACTT+TGG - chr6_3:36185417-36185436 Msa0949550:intron 30.0%
ACATATAAGAACACCATCTT+TGG + chr6_3:36185533-36185552 None:intergenic 30.0%
AAAAGAACATATGAAGTCGA+AGG - chr6_3:36185616-36185635 Msa0949550:CDS 30.0%
AAAGAACATATGAAGTCGAA+GGG - chr6_3:36185617-36185636 Msa0949550:CDS 30.0%
!!! AATACCACTGGATTTTTTGT+CGG - chr6_3:36185643-36185662 Msa0949550:CDS 30.0%
TACGTCTATACAAAGCAAAA+TGG + chr6_3:36185931-36185950 None:intergenic 30.0%
GAAAAAACTGGATGAAAGAA+TGG + chr6_3:36186055-36186074 None:intergenic 30.0%
CTTGAAAGTGATGAAAAAAC+TGG + chr6_3:36186067-36186086 None:intergenic 30.0%
! TGCAGTTGATTTCACATTAA+AGG - chr6_3:36186127-36186146 Msa0949550:CDS 30.0%
TTTAGGGATCAACAGTTTAA+CGG - chr6_3:36186185-36186204 Msa0949550:intron 30.0%
ACATGTATAAGCGAAGAAAA+GGG + chr6_3:36186216-36186235 None:intergenic 30.0%
TGAAAGAGATTCCAAAGATA+AGG + chr6_3:36186352-36186371 None:intergenic 30.0%
!! TTATCTTTGGAATCTCTTTC+AGG - chr6_3:36186351-36186370 Msa0949550:intron 30.0%
!!! AGTACTGGATTTTTTATCTC+AGG + chr6_3:36186450-36186469 None:intergenic 30.0%
! ACATGTTGATTGATAAGTAC+TGG + chr6_3:36186465-36186484 None:intergenic 30.0%
CATTCATACAATAAGATTGG+AGG + chr6_3:36186573-36186592 None:intergenic 30.0%
TAAATAACAGGTGAAATGGT+CGG - chr6_3:36186634-36186653 Msa0949550:intron 30.0%
!! ACAAGTTTGTTGAAACACTT+CGG - chr6_3:36186675-36186694 Msa0949550:intron 30.0%
GATATATACACAAGTGAAGT+TGG + chr6_3:36186773-36186792 None:intergenic 30.0%
! GTGAGTAATGTATTTTACCT+TGG - chr6_3:36186863-36186882 Msa0949550:intron 30.0%
CATCAATTTGTAGAAGAACA+AGG + chr6_3:36186895-36186914 None:intergenic 30.0%
ATGATTATGTGCAGTCATAT+TGG - chr6_3:36187029-36187048 Msa0949550:intron 30.0%
TGATTATGTGCAGTCATATT+GGG - chr6_3:36187030-36187049 Msa0949550:intron 30.0%
CATATTGCTTTATGTAGTCT+AGG + chr6_3:36187075-36187094 None:intergenic 30.0%
AAGCAATATGTTGTAGGAAT+TGG - chr6_3:36187085-36187104 Msa0949550:intron 30.0%
AAAACATATGAAGGGAAACA+AGG + chr6_3:36187224-36187243 None:intergenic 30.0%
TGATTACTGGATCAACAAAA+TGG - chr6_3:36187361-36187380 Msa0949550:intron 30.0%
GATTACTGGATCAACAAAAT+GGG - chr6_3:36187362-36187381 Msa0949550:intron 30.0%
ATCAACAAAATGGGAATTGA+TGG - chr6_3:36187371-36187390 Msa0949550:intron 30.0%
!! GTCTTCATAATTTTCAGGAA+TGG - chr6_3:36187417-36187436 Msa0949550:intron 30.0%
TTGTTAAGTCTTCGTATCGT+AGG + chr6_3:36183501-36183520 None:intergenic 35.0%
ATCTCAATGTCTTCGTTATC+GGG - chr6_3:36183578-36183597 Msa0949550:three_prime_UTR 35.0%
! TGAAACATTTGAAGGCATGA+AGG + chr6_3:36183671-36183690 None:intergenic 35.0%
! ACTTTTCATGAATCCCTAAC+TGG - chr6_3:36183690-36183709 Msa0949550:three_prime_UTR 35.0%
ACACAGATCTAATCCAGTTA+GGG + chr6_3:36183706-36183725 None:intergenic 35.0%
! TAAGAATGCTTTTGAGCCAT+TGG - chr6_3:36183954-36183973 Msa0949550:intron 35.0%
! GATTTTGAATGAGGGAGAAA+AGG + chr6_3:36184051-36184070 None:intergenic 35.0%
! CCCTCATTCAAAATCCTTTT+TGG - chr6_3:36184056-36184075 Msa0949550:CDS 35.0%
TTTGGAGGACTAAAAGTTGA+AGG - chr6_3:36184519-36184538 Msa0949550:CDS 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr6_3:36184872-36184891 Msa0949550:intron 35.0%
CAAGTTAGGAGATATTTAGC+TGG + chr6_3:36185049-36185068 None:intergenic 35.0%
CAGCTAAATATCTCCTAACT+TGG - chr6_3:36185047-36185066 Msa0949550:CDS 35.0%
! AAACAAAAGGTGCAAAACCT+AGG + chr6_3:36185094-36185113 None:intergenic 35.0%
! GTTTTTCTATTGCTCGTGAT+TGG - chr6_3:36185110-36185129 Msa0949550:intron 35.0%
! TTTTCTATTGCTCGTGATTG+GGG - chr6_3:36185112-36185131 Msa0949550:intron 35.0%
! ATTTTGCGAGAAGAGTTAAG+TGG + chr6_3:36185284-36185303 None:intergenic 35.0%
!!! TTTTTTGCAGAGAGCTATTG+AGG - chr6_3:36185471-36185490 Msa0949550:intron 35.0%
AAGAACATATGAAGTCGAAG+GGG - chr6_3:36185618-36185637 Msa0949550:CDS 35.0%
!! ATTTCTAGTGACACGTATTC+TGG - chr6_3:36185778-36185797 Msa0949550:intron 35.0%
AATCTGTTAAGATGTCCAAG+AGG + chr6_3:36185846-36185865 None:intergenic 35.0%
CTTGGACATCTTAACAGATT+TGG - chr6_3:36185846-36185865 Msa0949550:intron 35.0%
TAAAGGAATTAAAGTCGCTG+AGG - chr6_3:36186144-36186163 Msa0949550:intron 35.0%
AAAGGAATTAAAGTCGCTGA+GGG - chr6_3:36186145-36186164 Msa0949550:intron 35.0%
CACATGTATAAGCGAAGAAA+AGG + chr6_3:36186217-36186236 None:intergenic 35.0%
!! AGCTCCGTCAGATTTTAAAA+TGG - chr6_3:36186241-36186260 Msa0949550:intron 35.0%
GGTTCAATGATCATCTTTAC+TGG - chr6_3:36186262-36186281 Msa0949550:intron 35.0%
AAACACAAGTAATCAGCAGA+CGG + chr6_3:36186290-36186309 None:intergenic 35.0%
CAAAGATAAGGCAATAGACT+TGG + chr6_3:36186340-36186359 None:intergenic 35.0%
CAAGTCTATTGCCTTATCTT+TGG - chr6_3:36186338-36186357 Msa0949550:intron 35.0%
AGAGTTCATTACCATAGCAT+TGG - chr6_3:36186398-36186417 Msa0949550:intron 35.0%
GGATATATTCCAACAACTCT+GGG + chr6_3:36186429-36186448 None:intergenic 35.0%
AGGATATATTCCAACAACTC+TGG + chr6_3:36186430-36186449 None:intergenic 35.0%
TTGTATGAATGTGATGGTTG+AGG - chr6_3:36186582-36186601 Msa0949550:intron 35.0%
GTTGAAACACTTCGGAAATA+TGG - chr6_3:36186683-36186702 Msa0949550:intron 35.0%
ACTTCGGAAATATGGATACA+AGG - chr6_3:36186691-36186710 Msa0949550:intron 35.0%
CTTCGGAAATATGGATACAA+GGG - chr6_3:36186692-36186711 Msa0949550:intron 35.0%
GTTCATACCTGTCAAAACAT+TGG - chr6_3:36186714-36186733 Msa0949550:intron 35.0%
!!! GTTTCAACCAATGTTTTGAC+AGG + chr6_3:36186724-36186743 None:intergenic 35.0%
GCAAATGACTGTATAAATGC+AGG + chr6_3:36186749-36186768 None:intergenic 35.0%
TTCAACACAAGACACTAATC+AGG - chr6_3:36186841-36186860 Msa0949550:intron 35.0%
ACTAGTATAGTATCCTTCGA+AGG + chr6_3:36187112-36187131 None:intergenic 35.0%
! ATCACATACTTGTTAACCAG+AGG + chr6_3:36187136-36187155 None:intergenic 35.0%
!! ATGATTGTTGATGATGATGC+AGG - chr6_3:36187265-36187284 Msa0949550:intron 35.0%
TACTCATTTCTGTACGTGTA+TGG + chr6_3:36187296-36187315 None:intergenic 35.0%
CTTTAGTCAAGATCCTTACA+AGG - chr6_3:36187334-36187353 Msa0949550:intron 35.0%
CAGTAATCATACTCCTTGTA+AGG + chr6_3:36187350-36187369 None:intergenic 35.0%
! CTTACAAGGAGTATGATTAC+TGG - chr6_3:36187348-36187367 Msa0949550:intron 35.0%
! TGGGAGTCTTCATAATTTTC+AGG - chr6_3:36187412-36187431 Msa0949550:intron 35.0%
!!! TGATTTTTTGAGGTGTCAGA+TGG - chr6_3:36187518-36187537 Msa0949550:intron 35.0%
TGTAAAACAAAGCATGTGCT+TGG - chr6_3:36187543-36187562 Msa0949550:intron 35.0%
GTATCGTAGGAACGTGAAAA+TGG + chr6_3:36183488-36183507 None:intergenic 40.0%
GACACAGATCTAATCCAGTT+AGG + chr6_3:36183707-36183726 None:intergenic 40.0%
! TGGATTAGATCTGTGTCCAT+TGG - chr6_3:36183710-36183729 Msa0949550:exon 40.0%
! GCAGAAGCATGATATACCAA+TGG + chr6_3:36183729-36183748 None:intergenic 40.0%
GAGGGACTAAAACGAAAAGT+TGG - chr6_3:36184551-36184570 Msa0949550:CDS 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr6_3:36184875-36184894 Msa0949550:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr6_3:36184876-36184895 Msa0949550:intron 40.0%
TTTCTATTGCTCGTGATTGG+GGG - chr6_3:36185113-36185132 Msa0949550:intron 40.0%
TATGGGCGAAAAGTTTGAAG+AGG + chr6_3:36185194-36185213 None:intergenic 40.0%
CCCTATGTGCAACGTTATAT+GGG + chr6_3:36185211-36185230 None:intergenic 40.0%
CCCATATAACGTTGCACATA+GGG - chr6_3:36185208-36185227 Msa0949550:intron 40.0%
CCATATAACGTTGCACATAG+GGG - chr6_3:36185209-36185228 Msa0949550:intron 40.0%
!! AGTACCGACAAAAAATCCAG+TGG + chr6_3:36185650-36185669 None:intergenic 40.0%
! TGACACGTATTCTGGAAAGT+CGG - chr6_3:36185786-36185805 Msa0949550:intron 40.0%
ACTTGTATTGAACGTCCTCT+TGG - chr6_3:36185828-36185847 Msa0949550:intron 40.0%
TGAATCAGAGGTTCTGCTTT+AGG - chr6_3:36186168-36186187 Msa0949550:intron 40.0%
GAATCAGAGGTTCTGCTTTA+GGG - chr6_3:36186169-36186188 Msa0949550:intron 40.0%
TAGACTTGGCCATTTCAATG+CGG + chr6_3:36186326-36186345 None:intergenic 40.0%
CACAGACAGAAGAAGTTCAT+TGG + chr6_3:36186507-36186526 None:intergenic 40.0%
CAATGAACTTCTTCTGTCTG+TGG - chr6_3:36186505-36186524 Msa0949550:intron 40.0%
GGATACTATACTAGTACCTC+TGG - chr6_3:36187117-36187136 Msa0949550:intron 40.0%
CAAGTATGTGATGACTCCTT+CGG - chr6_3:36187144-36187163 Msa0949550:intron 40.0%
GCCTGTTTACAGATTTCACT+GGG - chr6_3:36187393-36187412 Msa0949550:intron 40.0%
TCCCAGTGAAATCTGTAAAC+AGG + chr6_3:36187397-36187416 None:intergenic 40.0%
TCTTGTCATCTTGACGGTTA+GGG + chr6_3:36187448-36187467 None:intergenic 40.0%
! ATGCAGTCTTGTCATCTTGA+CGG + chr6_3:36187454-36187473 None:intergenic 40.0%
ATTAAAGTCGTTGCTTGCCG+CGG + chr6_3:36183459-36183478 None:intergenic 45.0%
AACAATGACCTGAGTGAGTG+AGG - chr6_3:36183516-36183535 Msa0949550:three_prime_UTR 45.0%
AGAGGGACCAAAAGTGAAGA+TGG - chr6_3:36184490-36184509 Msa0949550:CDS 45.0%
TTGCCAGGAAGTGGATACAA+AGG + chr6_3:36185149-36185168 None:intergenic 45.0%
TTGTATCCACTTCCTGGCAA+AGG - chr6_3:36185149-36185168 Msa0949550:intron 45.0%
GCCCATATAACGTTGCACAT+AGG - chr6_3:36185207-36185226 Msa0949550:intron 45.0%
CCCCTATGTGCAACGTTATA+TGG + chr6_3:36185212-36185231 None:intergenic 45.0%
TTGCAGAGAGCTATTGAGGA+AGG - chr6_3:36185475-36185494 Msa0949550:intron 45.0%
ATGTGATGCCCGCATTGAAA+TGG - chr6_3:36186314-36186333 Msa0949550:intron 45.0%
AGACTTGGCCATTTCAATGC+GGG + chr6_3:36186325-36186344 None:intergenic 45.0%
TAACAGGTGAAATGGTCGGA+CGG - chr6_3:36186638-36186657 Msa0949550:intron 45.0%
GAAGAACAAGGGATAAGCCA+AGG + chr6_3:36186883-36186902 None:intergenic 45.0%
TGTAGGAATTGGACCTTCGA+AGG - chr6_3:36187096-36187115 Msa0949550:intron 45.0%
GGCCTGTTTACAGATTTCAC+TGG - chr6_3:36187392-36187411 Msa0949550:intron 45.0%
CTTGTCATCTTGACGGTTAG+GGG + chr6_3:36187447-36187466 None:intergenic 45.0%
GTCTTGTCATCTTGACGGTT+AGG + chr6_3:36187449-36187468 None:intergenic 45.0%
!! ATATATAAATATATATATAG+GGG - chr6_3:36183893-36183912 Msa0949550:CDS 5.0%
!!! AAAAAATTCTAATTTTTTTA+GGG + chr6_3:36184295-36184314 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+AGG + chr6_3:36184296-36184315 None:intergenic 5.0%
!!! TAAAAAATTTTGAATTTTTT+TGG - chr6_3:36184387-36184406 Msa0949550:CDS 5.0%
!!! AAAAAATTTTGAATTTTTTT+GGG - chr6_3:36184388-36184407 Msa0949550:CDS 5.0%
!! ATATATATATATATATATAG+GGG - chr6_3:36184088-36184107 Msa0949550:CDS 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG + chr6_3:36184802-36184821 None:intergenic 5.0%
!! ATATATATATATATATACAT+GGG + chr6_3:36184916-36184935 None:intergenic 5.0%
!! TATATATATATATATATACA+TGG + chr6_3:36184917-36184936 None:intergenic 5.0%
!! AATAAAAATAAAAATTAAGA+CGG + chr6_3:36186920-36186939 None:intergenic 5.0%
GCGCCCACCTAAAAACACTA+AGG + chr6_3:36184882-36184901 None:intergenic 50.0%
AGGCCTTTGTATCCACTTCC+TGG - chr6_3:36185143-36185162 Msa0949550:intron 50.0%
GAAGAGGCTGCTTACTTCCA+TGG + chr6_3:36185178-36185197 None:intergenic 50.0%
GTTGCACATAGGGGCTCAAA+TGG - chr6_3:36185218-36185237 Msa0949550:intron 50.0%
TATGCGTCGCGAGTTTCTTC+AGG + chr6_3:36185251-36185270 None:intergenic 50.0%
AGAAACTCGCGACGCATATC+TGG - chr6_3:36185253-36185272 Msa0949550:intron 50.0%
TCTGGGTGCATCCAATGCTA+TGG + chr6_3:36186412-36186431 None:intergenic 50.0%
TTGGATGCACCCAGAGTTGT+TGG - chr6_3:36186417-36186436 Msa0949550:intron 50.0%
TCCTTCGGATCTTGTTGCCA+GGG - chr6_3:36187159-36187178 Msa0949550:intron 50.0%
CAGATTATGAGCATGTGCCC+TGG + chr6_3:36187179-36187198 None:intergenic 50.0%
GGCACATGCTCATAATCTGC+AGG - chr6_3:36187180-36187199 Msa0949550:intron 50.0%
CGTTGCTTGCCGCGGAAATA+GGG + chr6_3:36183451-36183470 None:intergenic 55.0%
TCGTTGCTTGCCGCGGAAAT+AGG + chr6_3:36183452-36183471 None:intergenic 55.0%
GCTGTGTTCCTCACTCACTC+AGG + chr6_3:36183527-36183546 None:intergenic 55.0%
ATTGCTCGTGATTGGGGGCA+CGG - chr6_3:36185118-36185137 Msa0949550:intron 55.0%
TGGTCACCTTTGCCAGGAAG+TGG + chr6_3:36185158-36185177 None:intergenic 55.0%
CTTCCTGGCAAAGGTGACCA+TGG - chr6_3:36185158-36185177 Msa0949550:intron 55.0%
CTTCCATGGTCACCTTTGCC+AGG + chr6_3:36185164-36185183 None:intergenic 55.0%
GTCGAAGGGGTCAATACCAC+TGG - chr6_3:36185631-36185650 Msa0949550:CDS 55.0%
AGTCGCTGAGGGTGAATCAG+AGG - chr6_3:36186156-36186175 Msa0949550:intron 55.0%
GTCGGACGGCAAACGATTTG+AGG - chr6_3:36186652-36186671 Msa0949550:intron 55.0%
CTCCTTCGGATCTTGTTGCC+AGG - chr6_3:36187158-36187177 Msa0949550:intron 55.0%
GCCCTGGCAACAAGATCCGA+AGG + chr6_3:36187163-36187182 None:intergenic 60.0%
! TCGTGATTGGGGGCACGGCT+AGG - chr6_3:36185123-36185142 Msa0949550:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 36183442 36187806 36183442 ID=Msa0949550;Name=Msa0949550
chr6_3 mRNA 36183442 36187806 36183442 ID=Msa0949550-mRNA-1;Parent=Msa0949550;Name=Msa0949550-mRNA-1;_AED=0.10;_eAED=0.10;_QI=142|1|1|1|0.75|0.55|9|218|391
chr6_3 exon 36183442 36183605 36183442 ID=Msa0949550-mRNA-1:exon:8996;Parent=Msa0949550-mRNA-1
chr6_3 exon 36183674 36183961 36183674 ID=Msa0949550-mRNA-1:exon:8995;Parent=Msa0949550-mRNA-1
chr6_3 exon 36184047 36184205 36184047 ID=Msa0949550-mRNA-1:exon:8994;Parent=Msa0949550-mRNA-1
chr6_3 exon 36184386 36184604 36184386 ID=Msa0949550-mRNA-1:exon:8993;Parent=Msa0949550-mRNA-1
chr6_3 exon 36184766 36184875 36184766 ID=Msa0949550-mRNA-1:exon:8992;Parent=Msa0949550-mRNA-1
chr6_3 exon 36185042 36185116 36185042 ID=Msa0949550-mRNA-1:exon:8991;Parent=Msa0949550-mRNA-1
chr6_3 exon 36185584 36185767 36185584 ID=Msa0949550-mRNA-1:exon:8990;Parent=Msa0949550-mRNA-1
chr6_3 exon 36185974 36186152 36185974 ID=Msa0949550-mRNA-1:exon:8989;Parent=Msa0949550-mRNA-1
chr6_3 exon 36187649 36187806 36187649 ID=Msa0949550-mRNA-1:exon:8988;Parent=Msa0949550-mRNA-1
chr6_3 five_prime_UTR 36187665 36187806 36187665 ID=Msa0949550-mRNA-1:five_prime_utr;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36187649 36187664 36187649 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36185974 36186152 36185974 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36185584 36185767 36185584 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36185042 36185116 36185042 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36184766 36184875 36184766 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36184386 36184604 36184386 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36184047 36184205 36184047 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 CDS 36183728 36183961 36183728 ID=Msa0949550-mRNA-1:cds;Parent=Msa0949550-mRNA-1
chr6_3 three_prime_UTR 36183674 36183727 36183674 ID=Msa0949550-mRNA-1:three_prime_utr;Parent=Msa0949550-mRNA-1
chr6_3 three_prime_UTR 36183442 36183605 36183442 ID=Msa0949550-mRNA-1:three_prime_utr;Parent=Msa0949550-mRNA-1
Gene Sequence

>Msa0949550

ATGTCTTCGTTATCGGGTTTTGCACCTTTTGTTTTTCTATTGCTCGTGATTGGGGGCACGGCTAGGCCTTTGTATCCACTTCCTGGCAAAGGTGACCATGGAAGTAAGCAGCCTCTTCAAACTTTTCGCCCATATAACGTTGCACATAGGGGCTCAAATGGAGAACTTCCTGAAGAAACTCGCGACGCATATCTGAGAGCTATTGAGGAAGGTGCAGACTTCATTGAAACAGATATATTATCTTCCAAAGATGGTGTTCTTATATGTTTCCACGACTTTATTCTTGATAATACTACTGACATAGCAAAATACAAAGAGTTTGCTAATCGTAAAAGAACATATGAAGTCGAAGGGGTCAATACCACTGGATTTTTTGTCGTTGATTTCACATTAAAGGAATTAAAGTCGCTGAGGGTGAATCAGAGGTTCTGCTTTAGGGATCAACAGTTTAACGGAAAATTTCAAATAATCACTTTTGAAGAGTTCATTACCATAGCATTGGATGCACCCAGAGTTGTTGGAATATATCCTGAGATAAAAAATCCAGTACTTATCAATCAACATGTGAAATGGTCGGACGGCAAACGATTTGAGGACAAGTTTGTTGAAACACTTCGGAAATATGGATACAAGGGTTCATACCTGTCAAAACATTGGTTGAAACAACCTGCATTTATACAGTCATTTGCTCCAACTTCACTTGTGTATATATCAAATCAAACGGACTTGCCTAAGATTTTATTAATCGATGATGTTGATTTTTCAACACAAGACACTAATCAGTCATATTGGGAAATTACATCTGATACATACCTAGACTACATAAAGCAATATGTTGTAGGAATTGGACCTTCGAAGGATACTATACTAGTACCTCTGGTTAACAAGTATGTGATGACTCCTTCGGATCTTGTTGCCAGGGCACATGCTCATAATCTGCAGGTGCATCCATACACGTACAGAAATGAGTACCAGTATTTGCATTTCAACTTTAGTCAAGATCCTTACAAGGAGTATGATTACTGGATCAACAAAATGGGAATTGATGGCCTGTTTACAGATTTCACTGGGAGTCTTCATAATTTTCAGGAATGGACAACCCCTAACCGTCAAGATGACAAGACTGCATCCGAGCTATTACATAAAATTGCTGTGTTAGCATCTGCTTATGAATGA

Protein sequence

>Msa0949550

MSSLSGFAPFVFLLLVIGGTARPLYPLPGKGDHGSKQPLQTFRPYNVAHRGSNGELPEETRDAYLRAIEEGADFIETDILSSKDGVLICFHDFILDNTTDIAKYKEFANRKRTYEVEGVNTTGFFVVDFTLKELKSLRVNQRFCFRDQQFNGKFQIITFEEFITIALDAPRVVGIYPEIKNPVLINQHVKWSDGKRFEDKFVETLRKYGYKGSYLSKHWLKQPAFIQSFAPTSLVYISNQTDLPKILLIDDVDFSTQDTNQSYWEITSDTYLDYIKQYVVGIGPSKDTILVPLVNKYVMTPSDLVARAHAHNLQVHPYTYRNEYQYLHFNFSQDPYKEYDYWINKMGIDGLFTDFTGSLHNFQEWTTPNRQDDKTASELLHKIAVLASAYE*