AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692870 MtrunA17_Chr8g0385271 88.743 533 28 6 1 507 1 527 0.0 924
Msa0692870 MtrunA17_Chr3g0131031 75.394 508 93 6 22 503 22 523 0.0 722
Msa0692870 MtrunA17_Chr4g0008821 54.023 435 165 8 11 424 8 428 1.39e-138 408
Msa0692870 MtrunA17_Chr3g0135611 63.529 340 97 5 106 424 92 425 2.12e-138 407
Msa0692870 MtrunA17_Chr4g0045871 95.588 68 3 0 387 454 5 72 1.40e-36 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692870 AT2G30390.1 75.705 461 73 7 77 504 56 510 0.0 649
Msa0692870 AT2G30390.2 74.098 471 73 8 77 504 56 520 0.0 641
Msa0692870 AT5G26030.1 61.850 346 105 6 104 428 84 423 7.87e-146 426
Msa0692870 AT5G26030.2 61.850 346 105 6 104 428 84 423 7.87e-146 426

Find 197 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTCTTTATGAAGTTTA+TGG 0.116721 4_4:-61572170 None:intergenic
CAGAAGGAGGTTGAAGAATT+TGG 0.122503 4_4:-61572503 None:intergenic
TTTACCTGATTCCCACAAAT+TGG 0.162782 4_4:-61572687 None:intergenic
TTATGCAGTGTTTAGTATTT+TGG 0.178856 4_4:-61572601 None:intergenic
TAGAATCTGGAATAGAAAAT+TGG 0.187973 4_4:+61576967 Msa0692870:CDS
AATAATTGAACTTGGGAAAA+AGG 0.214551 4_4:+61576756 Msa0692870:CDS
AAGCAGATTCTTACAACTTT+TGG 0.225661 4_4:+61572096 Msa0692870:five_prime_UTR
CAAGGTTGATGTTACCTAAT+TGG 0.226441 4_4:-61576802 None:intergenic
CTCAATACTGTTGAGTTTCA+TGG 0.238187 4_4:-61572240 None:intergenic
GGGGAATATTGCCCTTATTT+AGG 0.242136 4_4:+61577604 Msa0692870:CDS
TTTGTCTTTATGAAGTTTAT+GGG 0.254769 4_4:-61572169 None:intergenic
TGCATACACACTTGCTTATC+AGG 0.269635 4_4:+61576269 Msa0692870:CDS
CATTCACGTTCACCTAAATA+AGG 0.273268 4_4:-61577616 None:intergenic
GTATCTGATACGCCTCTTAT+TGG 0.284907 4_4:+61573348 Msa0692870:CDS
AATTATTGTCTCATCTGTAT+AGG 0.287087 4_4:-61576740 None:intergenic
AAAGAATTGGCTTTAGAATC+TGG 0.287435 4_4:+61576954 Msa0692870:intron
TTAATTGAAAACGAGCTAAA+AGG 0.298159 4_4:+61575030 Msa0692870:CDS
ATTATTGTCTCATCTGTATA+GGG 0.299242 4_4:-61576739 None:intergenic
TAGCTTCAGGATTAACATTT+CGG 0.309479 4_4:-61572024 None:intergenic
CCCCATTCCCACACCAATAT+TGG 0.313869 4_4:-61577477 None:intergenic
ATCGAAGTCATGCACTAAAA+AGG 0.318357 4_4:+61577725 Msa0692870:three_prime_UTR
TTGGCAGTCTTTGGTTCCCC+TGG 0.321263 4_4:+61577398 Msa0692870:intron
AGAAGGAGGTTGAAGAATTT+GGG 0.329010 4_4:-61572502 None:intergenic
TGTATGTTGGCATGCCTTAC+TGG 0.329983 4_4:+61573883 Msa0692870:CDS
ACCAATATTGGTGTGGGAAT+GGG 0.331640 4_4:+61577476 Msa0692870:CDS
GTTTGCTGGCCGTACCAATT+AGG 0.332495 4_4:+61576788 Msa0692870:CDS
CTAAAGCTCCCACAGGTAAA+AGG 0.335562 4_4:-61573305 None:intergenic
GGGCAGTGTAGAAGAGTTAT+TGG 0.341489 4_4:+61577419 Msa0692870:CDS
TCCTCCATCTCTGCTTTGTA+TGG 0.344238 4_4:-61576198 None:intergenic
GTTGCAATAACAGTGGATAT+TGG 0.345755 4_4:+61571995 None:intergenic
AGAATCTGGAATAGAAAATT+GGG 0.348352 4_4:+61576968 Msa0692870:CDS
ATTCCCACAAATTGGGTAGA+TGG 0.352688 4_4:-61572679 None:intergenic
TGGGGCCGTGTTCCTGCTCT+TGG 0.355451 4_4:+61576987 Msa0692870:CDS
CTACCCAATTTGTGGGAATC+AGG 0.361852 4_4:+61572683 Msa0692870:five_prime_UTR
CTTTCACAATCCATAGCTTC+AGG 0.369788 4_4:-61572037 None:intergenic
CTCTCTAAATAATGGACATT+GGG 0.373481 4_4:-61572375 None:intergenic
TGTCATCCCATTCCTTATTC+CGG 0.375590 4_4:-61572119 None:intergenic
CAGTTGAAAACTTGCATAGT+TGG 0.382192 4_4:+61573219 Msa0692870:CDS
TGGTTCAAGTTTGCGTCTCT+TGG 0.386465 4_4:+61574814 Msa0692870:CDS
CAGTAATTGAAGGACAAGTT+AGG 0.389321 4_4:+61572796 Msa0692870:intron
GCCTCTTCCACGTATGCAAC+TGG 0.391952 4_4:-61576168 None:intergenic
GCTTGATATTGTATTCTCTT+CGG 0.397375 4_4:-61572077 None:intergenic
TAGAAACCTCCGTGTGGCCT+CGG 0.399150 4_4:-61573185 None:intergenic
ACAAGAGAGAGAGTTTGAAA+AGG 0.401340 4_4:+61577941 Msa0692870:three_prime_UTR
GAAGTTGAAGGAGCACGAAT+TGG 0.411606 4_4:-61572853 None:intergenic
GGGAGCTTAAGAATTAATCT+TGG 0.417511 4_4:-61572192 None:intergenic
TGGTTTAGACACAGCATTTG+TGG 0.420130 4_4:+61577760 Msa0692870:three_prime_UTR
TGCTAATGGTATACATATAC+AGG 0.421997 4_4:-61577684 None:intergenic
CACCAATATTGGTGTGGGAA+TGG 0.422437 4_4:+61577475 Msa0692870:CDS
ACGGCCATCGCACCAACATA+TGG 0.424661 4_4:-61577062 None:intergenic
GTCTCTTGGAGAGCATATTC+CGG 0.431661 4_4:+61574828 Msa0692870:CDS
ATTGAAAATTGTGGATAAAG+TGG 0.445577 4_4:-61574782 None:intergenic
AGCGTACCTGTCGAGCTTCA+AGG 0.453205 4_4:-61577091 None:intergenic
TTTCCAAGCAATCACTCAAC+AGG 0.455055 4_4:+61573280 Msa0692870:CDS
GTATTACTGGATCGGCAAAA+AGG 0.455393 4_4:-61573449 None:intergenic
CAAGAGAGAGAGTTTGAAAA+GGG 0.457075 4_4:+61577942 Msa0692870:three_prime_UTR
GGAGTTGCCACCACCAATAT+TGG 0.459023 4_4:+61577464 Msa0692870:CDS
TTGTCTTTATGAAGTTTATG+GGG 0.463347 4_4:-61572168 None:intergenic
GGACAAAGAGTGCTGAAACT+TGG 0.466826 4_4:+61577502 Msa0692870:CDS
AAATGAAGTAGTACCTTCTC+TGG 0.467324 4_4:-61575063 None:intergenic
TTACCTGATTCCCACAAATT+GGG 0.469051 4_4:-61572686 None:intergenic
GTTATATTATATTATATGAC+TGG 0.475354 4_4:+61578066 Msa0692870:three_prime_UTR
GTGTTATTGTTGAACCTTGG+AGG 0.476838 4_4:+61573387 Msa0692870:CDS
AGAAACCTCCGTGTGGCCTC+GGG 0.477005 4_4:-61573184 None:intergenic
TGGCAGTCTTTGGTTCCCCT+GGG 0.482026 4_4:+61577399 Msa0692870:intron
TGACCCATCTACCCAATTTG+TGG 0.483162 4_4:+61572675 Msa0692870:five_prime_UTR
TCAATAACCTCTTCGGTGAA+TGG 0.483886 4_4:-61573909 None:intergenic
TCTCTCTAAATAATGGACAT+TGG 0.487039 4_4:-61572376 None:intergenic
CAAGAGTACTGGTTCAGACT+TGG 0.487258 4_4:+61578013 Msa0692870:three_prime_UTR
GGCAACCTGTACCGCTCAAA+AGG 0.487397 4_4:+61573149 Msa0692870:CDS
ATGATATTCTTCAGCGCACA+TGG 0.489098 4_4:+61576141 Msa0692870:CDS
ATGGTCTGAAGCACAACCCT+TGG 0.489226 4_4:+61573257 Msa0692870:CDS
AAATGTTAATCCTGAAGCTA+TGG 0.490782 4_4:+61572027 Msa0692870:five_prime_UTR
GCAACGTGAAGGATACATAA+AGG 0.491303 4_4:+61574996 Msa0692870:CDS
TCCGCCGTTGTTGCCGCAGA+TGG 0.491839 4_4:+61572295 Msa0692870:five_prime_UTR
TGGATTGTGAAAGTTGGAGC+TGG 0.492488 4_4:+61572047 Msa0692870:five_prime_UTR
TATGAGCAAGAAGAAGTTGA+AGG 0.493190 4_4:-61572865 None:intergenic
TGCACATCATCTAGAGTCTC+TGG 0.494401 4_4:-61573411 None:intergenic
AACAAGCTTTGTAATTTCAA+AGG 0.494907 4_4:-61574753 None:intergenic
CACCGAAGAGGTTATTGAGC+TGG 0.495626 4_4:+61573914 Msa0692870:CDS
CCAATATTGGTGTGGGAATG+GGG 0.495656 4_4:+61577477 Msa0692870:CDS
GATGAGACAATAATTGAACT+TGG 0.502371 4_4:+61576748 Msa0692870:CDS
TGAAGAAAACTAAACAACCT+TGG 0.503018 4_4:-61573575 None:intergenic
TGAAGAAAACTAAACAACCT+TGG 0.503018 4_4:-61573637 None:intergenic
TACCAGCTCAATAACCTCTT+CGG 0.504422 4_4:-61573916 None:intergenic
TCGGTGAATGGATGCCAGTA+AGG 0.504573 4_4:-61573897 None:intergenic
AGTAATTGAAGGACAAGTTA+GGG 0.506686 4_4:+61572797 Msa0692870:intron
AGCAGCATATGTGATGCTAA+TGG 0.509044 4_4:-61577698 None:intergenic
ACCCACTTTCATTTCAGACT+TGG 0.509928 4_4:+61577016 Msa0692870:CDS
ATCTTATCATCACCAATAAG+AGG 0.511634 4_4:-61573360 None:intergenic
TGTCTTTATGAAGTTTATGG+GGG 0.513709 4_4:-61572167 None:intergenic
GACCCATCTACCCAATTTGT+GGG 0.516866 4_4:+61572676 Msa0692870:five_prime_UTR
TCCAGTTGCATACGTGGAAG+AGG 0.517311 4_4:+61576167 Msa0692870:CDS
GTGCCTGTTGAGTGATTGCT+TGG 0.517670 4_4:-61573283 None:intergenic
ATTCACGTTCACCTAAATAA+GGG 0.517687 4_4:-61577615 None:intergenic
TCGAGCTTCAAGGTTTGAAA+CGG 0.518947 4_4:-61577081 None:intergenic
TTCAAACCTTGAAGCTCGAC+AGG 0.520547 4_4:+61577085 Msa0692870:CDS
TTACATTGCCGTTGTGTGGA+GGG 0.521136 4_4:-61577651 None:intergenic
TGTATTTGTGCAGTAATTGA+AGG 0.525579 4_4:+61572786 Msa0692870:intron
AAGCTATGGATTGTGAAAGT+TGG 0.527864 4_4:+61572041 Msa0692870:five_prime_UTR
TCTTGTGTTGTTGACAAGCC+GGG 0.528239 4_4:-61577995 None:intergenic
CTCTTGTGTTGTTGACAAGC+CGG 0.530114 4_4:-61577996 None:intergenic
AGCCACTGGCTCAATTATGC+AGG 0.530233 4_4:+61573600 Msa0692870:CDS
TAGATGGGTCACTAAGAAGA+AGG 0.531509 4_4:-61572663 None:intergenic
TATTGGTGTGGGAATGGGGA+TGG 0.531632 4_4:+61577481 Msa0692870:CDS
CGGCCATCGCACCAACATAT+GGG 0.532880 4_4:-61577061 None:intergenic
TTCCCACAAATTGGGTAGAT+GGG 0.533577 4_4:-61572678 None:intergenic
ACACTAGAAGAAATTGATGT+TGG 0.534108 4_4:+61576928 Msa0692870:CDS
TGCCAAGTCTGAAATGAAAG+TGG 0.536826 4_4:-61577018 None:intergenic
GGAGTGTTATTGTTGAACCT+TGG 0.536999 4_4:+61573384 Msa0692870:CDS
ATAACTCTTCTACACTGCCC+AGG 0.537496 4_4:-61577416 None:intergenic
CGCCACGATGATGAAGTTTG+CGG 0.538549 4_4:-61572323 None:intergenic
ATTCTCATACAGAGTAGAGT+TGG 0.541924 4_4:+61576697 Msa0692870:intron
GTCTTTATGAAGTTTATGGG+GGG 0.544082 4_4:-61572166 None:intergenic
ATTAATTCTTAAGCTCCCTA+AGG 0.548406 4_4:+61572197 Msa0692870:five_prime_UTR
TAAATTACATTGCCGTTGTG+TGG 0.548626 4_4:-61577655 None:intergenic
TGAAAGTTGGAGCTGGGCTG+TGG 0.549079 4_4:+61572054 Msa0692870:five_prime_UTR
ATTACATTGCCGTTGTGTGG+AGG 0.550349 4_4:-61577652 None:intergenic
GTTGCATACGTGGAAGAGGC+TGG 0.554817 4_4:+61576171 Msa0692870:CDS
TTAGAAGTCACCACTGGAGA+GGG 0.556011 4_4:+61577567 Msa0692870:CDS
GTGGGTTCACATCCAAGAGC+AGG 0.558709 4_4:-61576999 None:intergenic
TGTATCCTTCACGTTGCCGT+TGG 0.562062 4_4:-61574990 None:intergenic
GGAATGTGTGGATTTAATCA+TGG 0.563853 4_4:+61576218 Msa0692870:CDS
TGTCAACAACACAAGAGTAC+TGG 0.564254 4_4:+61578002 Msa0692870:three_prime_UTR
TTAGACACAGCATTTGTGGA+TGG 0.564638 4_4:+61577764 Msa0692870:three_prime_UTR
GAGACGCAAACTTGAACCAC+TGG 0.565410 4_4:-61574810 None:intergenic
ATTACCATCTGCGGCAACAA+CGG 0.565704 4_4:-61572299 None:intergenic
TGATCCATACAAAGCAGAGA+TGG 0.567879 4_4:+61576194 Msa0692870:CDS
CATTCCCACACCAATATTGG+TGG 0.572403 4_4:-61577474 None:intergenic
CTTATTGGTGATGATAAGAT+CGG 0.572457 4_4:+61573363 Msa0692870:CDS
AAGCTAGAGTATTACTGGAT+CGG 0.573107 4_4:-61573457 None:intergenic
AGCATATGACTCACAACGTA+GGG 0.577719 4_4:+61577443 Msa0692870:CDS
AGCAGAGATGGAGGAATGTG+TGG 0.580461 4_4:+61576206 Msa0692870:CDS
TAACTCTTCTACACTGCCCA+GGG 0.581883 4_4:-61577415 None:intergenic
TCCCACACCAATATTGGTGG+TGG 0.587248 4_4:-61577471 None:intergenic
GCACGATTTGTCAAGCGTTG+AGG 0.587560 4_4:+61572265 Msa0692870:five_prime_UTR
CGTTGTGTGGAGGGTAGCGT+AGG 0.587678 4_4:-61577642 None:intergenic
AAGAGTGCTGAAACTTGGAA+TGG 0.588223 4_4:+61577507 Msa0692870:CDS
TCTCCCATATGTTGGTGCGA+TGG 0.590320 4_4:+61577058 Msa0692870:CDS
GCACAAGTGAGGCAAGAATG+AGG 0.590594 4_4:-61572895 None:intergenic
TGCCACCACCAATATTGGTG+TGG 0.592628 4_4:+61577469 Msa0692870:CDS
ATGAGACAATAATTGAACTT+GGG 0.593413 4_4:+61576749 Msa0692870:CDS
GTCCCAGCAAAAGTGTATGT+TGG 0.593607 4_4:+61573870 Msa0692870:CDS
TCGATGCTCCCGAGGCCACA+CGG 0.594384 4_4:+61573176 Msa0692870:CDS
TTTAGAAGTCACCACTGGAG+AGG 0.595864 4_4:+61577566 Msa0692870:CDS
TGGTACCAACGGCAACGTGA+AGG 0.595867 4_4:+61574985 Msa0692870:CDS
AGATGGGTCACTAAGAAGAA+GGG 0.597732 4_4:-61572662 None:intergenic
TTGATGTTACCTAATTGGTA+CGG 0.602307 4_4:-61576797 None:intergenic
GCCACCACCAATATTGGTGT+GGG 0.603981 4_4:+61577470 Msa0692870:CDS
ATCCTGCATAATTGAGCCAG+TGG 0.604595 4_4:-61573602 None:intergenic
CACATCCAAGAGCAGGAACA+CGG 0.605645 4_4:-61576992 None:intergenic
CTAGAGTCTCTGGACCTCCA+AGG 0.606445 4_4:-61573401 None:intergenic
GCCAAGTCTGAAATGAAAGT+GGG 0.608379 4_4:-61577017 None:intergenic
TGGGGTTCCAGTTGCATACG+TGG 0.609244 4_4:+61576161 Msa0692870:CDS
ACCATCTGCGGCAACAACGG+CGG 0.609884 4_4:-61572296 None:intergenic
GAAGTTACTAAAGCTCCCAC+AGG 0.611643 4_4:-61573312 None:intergenic
TGATATTCTTCAGCGCACAT+GGG 0.611904 4_4:+61576142 Msa0692870:CDS
GTAGAGTTGGACCTGTGGAA+TGG 0.613496 4_4:+61576710 Msa0692870:CDS
ATGCTTTAGATACATACAAG+AGG 0.615273 4_4:-61577814 None:intergenic
GATGGGTCACTAAGAAGAAG+GGG 0.621364 4_4:-61572661 None:intergenic
GGATTGTGAAAGTTGGAGCT+GGG 0.621926 4_4:+61572048 Msa0692870:five_prime_UTR
TAATACCTTCGTGGTACCAA+CGG 0.622145 4_4:+61574974 Msa0692870:CDS
AAAACAAACGAATATACAGA+AGG 0.624061 4_4:-61572519 None:intergenic
ATAAGGGCAATATTCCCCAC+TGG 0.625224 4_4:-61577599 None:intergenic
TGAGCGGTACAGGTTGCCTG+TGG 0.626715 4_4:-61573144 None:intergenic
GGAAGCAAACAAAATGAGCA+AGG 0.626950 4_4:-61577974 None:intergenic
GAAATAAGTTGCAATAACAG+TGG 0.628248 4_4:+61571988 None:intergenic
CTGGTCGAAATTGAAAATTG+TGG 0.628745 4_4:-61574791 None:intergenic
GAATCTGGAATAGAAAATTG+GGG 0.630181 4_4:+61576969 Msa0692870:CDS
CTGGCATCCATTCACCGAAG+AGG 0.630296 4_4:+61573902 Msa0692870:CDS
AGTGATTGCTTGGAAACCAA+GGG 0.631296 4_4:-61573273 None:intergenic
TCCATACAAAGCAGAGATGG+AGG 0.635000 4_4:+61576197 Msa0692870:CDS
TGAAGGATACATAAAGGCAA+TGG 0.635320 4_4:+61575002 Msa0692870:CDS
ATTGAGAGTCTCCCATATGT+TGG 0.638627 4_4:+61577050 Msa0692870:CDS
AGCACACGGTAATACCTTCG+TGG 0.647603 4_4:+61574965 Msa0692870:CDS
AAGTCTCTCATAAGTTCACA+AGG 0.649637 4_4:-61577896 None:intergenic
GATATTCTTCAGCGCACATG+GGG 0.656107 4_4:+61576143 Msa0692870:CDS
ATAAGCAAGTGTGTATGCAT+TGG 0.657766 4_4:-61576265 None:intergenic
GTTTGCGGAATTACCATCTG+CGG 0.658987 4_4:-61572308 None:intergenic
ACAAACGAATATACAGAAGG+AGG 0.660800 4_4:-61572516 None:intergenic
ACAGAGTAGAGTTGGACCTG+TGG 0.661320 4_4:+61576705 Msa0692870:intron
CAGCATATGACTCACAACGT+AGG 0.661889 4_4:+61577442 Msa0692870:CDS
GAGTGATTGCTTGGAAACCA+AGG 0.662624 4_4:-61573274 None:intergenic
CGCAAACTTCATCATCGTGG+CGG 0.664466 4_4:+61572324 Msa0692870:five_prime_UTR
AGGATATCATACGATTGCCA+AGG 0.665198 4_4:+61573558 Msa0692870:intron
AGGATATCATACGATTGCCA+AGG 0.665198 4_4:+61573620 Msa0692870:CDS
TCTAGTCAACATGCAGCACA+CGG 0.678864 4_4:+61574951 Msa0692870:CDS
TTCCGCAAACTTCATCATCG+TGG 0.681335 4_4:+61572321 Msa0692870:five_prime_UTR
AATTACGAGAAGCACAAGTG+AGG 0.687911 4_4:-61572906 None:intergenic
GTAATTGAAGGACAAGTTAG+GGG 0.688233 4_4:+61572798 Msa0692870:intron
AAGGTGTATCGATGCTCCCG+AGG 0.689663 4_4:+61573168 Msa0692870:CDS
AACTCTTCTACACTGCCCAG+GGG 0.707896 4_4:-61577414 None:intergenic
CGTTGCCGTTGGTACCACGA+AGG 0.713793 4_4:-61574979 None:intergenic
ATGGGTCACTAAGAAGAAGG+GGG 0.719025 4_4:-61572660 None:intergenic
CTACGCTACCCTCCACACAA+CGG 0.754473 4_4:+61577643 Msa0692870:three_prime_UTR
CGTTACTAGAAACCTCCGTG+TGG 0.770046 4_4:-61573191 None:intergenic
ATGCTCCCGAGGCCACACGG+AGG 0.801097 4_4:+61573179 Msa0692870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAACTAATAAAAGT+TGG - chr4_4:61573092-61573111 None:intergenic 10.0%
!!! CTAATATTCTTTATTTTTAT+AGG + chr4_4:61573115-61573134 Msa0692870:intron 10.0%
!! ATAAAATAAATTGACATATT+TGG - chr4_4:61574421-61574440 None:intergenic 10.0%
!! ATGAAAAAAAAAATGAATAA+CGG + chr4_4:61575442-61575461 Msa0692870:intron 10.0%
!! AAAAAAAAAAAGAAAAAAGA+AGG - chr4_4:61575638-61575657 None:intergenic 10.0%
!!! AAATGAAGAATTTTGTTTTA+GGG - chr4_4:61572635-61572654 None:intergenic 15.0%
!!! AAAATGAAGAATTTTGTTTT+AGG - chr4_4:61572636-61572655 None:intergenic 15.0%
!!! TTTTTCATAAATCAATTTCT+GGG + chr4_4:61572719-61572738 Msa0692870:intron 15.0%
!! AAATAATCTTGTACAATATT+TGG - chr4_4:61572996-61573015 None:intergenic 15.0%
!!! TAAAATAAATTTTGCACTAA+TGG + chr4_4:61574099-61574118 Msa0692870:intron 15.0%
!!! AAAATAAATTTTGCACTAAT+GGG + chr4_4:61574100-61574119 Msa0692870:intron 15.0%
!!! TGAGAACTTTTTAAAAAAAA+TGG + chr4_4:61574483-61574502 Msa0692870:intron 15.0%
!! ATAAATAACATTATCACATT+AGG + chr4_4:61575312-61575331 Msa0692870:intron 15.0%
!! AACATCAATAATATTTAAGA+AGG + chr4_4:61575390-61575409 Msa0692870:intron 15.0%
!!! TTCATTTTTTTTTTCATTCA+TGG - chr4_4:61575439-61575458 None:intergenic 15.0%
!! TATTAGTATTCATAAAGATA+AGG - chr4_4:61575706-61575725 None:intergenic 15.0%
!!! TTTTTATCTTATTTTGACAT+TGG + chr4_4:61576005-61576024 Msa0692870:intron 15.0%
!!! TATCTAAAGCATTTTTATTT+GGG + chr4_4:61577825-61577844 Msa0692870:three_prime_UTR 15.0%
!! GTTATATTATATTATATGAC+TGG + chr4_4:61578066-61578085 Msa0692870:three_prime_UTR 15.0%
!! TTTGTCTTTATGAAGTTTAT+GGG - chr4_4:61572172-61572191 None:intergenic 20.0%
!!! GAAAAAAGTGATTTTTTCAA+GGG - chr4_4:61572546-61572565 None:intergenic 20.0%
!!! TGAAAAAAGTGATTTTTTCA+AGG - chr4_4:61572547-61572566 None:intergenic 20.0%
!!! CAGAAATTGATTTATGAAAA+AGG - chr4_4:61572720-61572739 None:intergenic 20.0%
!!! CTTTTTCATAAATCAATTTC+TGG + chr4_4:61572718-61572737 Msa0692870:intron 20.0%
!!! ATTATTTCTTGTAGTTTAGT+TGG + chr4_4:61573009-61573028 Msa0692870:intron 20.0%
!! TAAAAATACATCACTAAAAG+TGG - chr4_4:61574000-61574019 None:intergenic 20.0%
!!! TGAGTTAGTTTTACATAATT+TGG + chr4_4:61574178-61574197 Msa0692870:intron 20.0%
!! AGAGAATTAGAAAAAGTAAT+TGG + chr4_4:61574395-61574414 Msa0692870:intron 20.0%
!! AGTTTATTCAAGAAGATAAT+TGG - chr4_4:61574621-61574640 None:intergenic 20.0%
!! TGTAATTTCAAAGGAAAAAT+TGG - chr4_4:61574747-61574766 None:intergenic 20.0%
!! CCAATTTATTATCTAACTTT+CGG + chr4_4:61574890-61574909 Msa0692870:intron 20.0%
!! TTCGGTTATGAATTATTTAT+TGG + chr4_4:61574908-61574927 Msa0692870:intron 20.0%
!!! TTGATAATATACAGATGTTT+AGG - chr4_4:61575116-61575135 None:intergenic 20.0%
!! GATAACTTAATGTATATAGT+CGG + chr4_4:61575160-61575179 Msa0692870:intron 20.0%
!!! TTTTGGTACCTTTTTTATTT+TGG - chr4_4:61575508-61575527 None:intergenic 20.0%
!!! ATTTTCTAGTCAAATAATCA+GGG - chr4_4:61575812-61575831 None:intergenic 20.0%
!! CAACAAATATTTACAATGAA+GGG - chr4_4:61576089-61576108 None:intergenic 20.0%
!! ACAACAAATATTTACAATGA+AGG - chr4_4:61576090-61576109 None:intergenic 20.0%
!! ATAATGAACTGTTAGAAATT+TGG - chr4_4:61576676-61576695 None:intergenic 20.0%
!! GGAATAAATAACAAAAAACA+AGG - chr4_4:61576823-61576842 None:intergenic 20.0%
!! ATCTAAAAAATATGCTGATA+TGG - chr4_4:61577294-61577313 None:intergenic 20.0%
!!! TAAAAAGGAATTCTAAAATC+TGG + chr4_4:61577740-61577759 Msa0692870:three_prime_UTR 20.0%
!!! GTATCTAAAGCATTTTTATT+TGG + chr4_4:61577824-61577843 Msa0692870:three_prime_UTR 20.0%
! TTGTCTTTATGAAGTTTATG+GGG - chr4_4:61572171-61572190 None:intergenic 25.0%
! GTTTGTCTTTATGAAGTTTA+TGG - chr4_4:61572173-61572192 None:intergenic 25.0%
! AAAAAAGAAGAGTCTAAGTT+CGG - chr4_4:61572416-61572435 None:intergenic 25.0%
! AAAACAAACGAATATACAGA+AGG - chr4_4:61572522-61572541 None:intergenic 25.0%
!! TTATGCAGTGTTTAGTATTT+TGG - chr4_4:61572604-61572623 None:intergenic 25.0%
! CACAAAATAGCAATTGAAAA+GGG - chr4_4:61572954-61572973 None:intergenic 25.0%
! ACACAAAATAGCAATTGAAA+AGG - chr4_4:61572955-61572974 None:intergenic 25.0%
! GAAAAACACAATTTCATATG+AGG - chr4_4:61573059-61573078 None:intergenic 25.0%
! GCAAAAAGGTTAAACAAAAA+CGG - chr4_4:61573438-61573457 None:intergenic 25.0%
! TGTACAGAAAATGTAACTAA+TGG - chr4_4:61573531-61573550 None:intergenic 25.0%
! TAATGGTGATAAAAAAACCT+TGG - chr4_4:61573673-61573692 None:intergenic 25.0%
! TGTACAGAAAATGTAACTAA+TGG - chr4_4:61573531-61573550 None:intergenic 25.0%
!!! GATGTATTTTTACGAGTTTT+AGG + chr4_4:61574008-61574027 Msa0692870:intron 25.0%
! TATTTCCTAGGTTAACTTAA+TGG - chr4_4:61574294-61574313 None:intergenic 25.0%
! TTAACCTAGGAAATATATAC+AGG + chr4_4:61574299-61574318 Msa0692870:intron 25.0%
! GATACAAACTTAGAAAATTG+AGG + chr4_4:61574361-61574380 Msa0692870:intron 25.0%
!!! TACTTTTTCTAATTCTCTCA+AGG - chr4_4:61574393-61574412 None:intergenic 25.0%
! AGTACAAAACACATTCAAAA+TGG - chr4_4:61574551-61574570 None:intergenic 25.0%
! TCTTGAATAAACTTTAACCT+TGG + chr4_4:61574628-61574647 Msa0692870:intron 25.0%
!! AACAAGCTTTGTAATTTCAA+AGG - chr4_4:61574756-61574775 None:intergenic 25.0%
! ATTGAAAATTGTGGATAAAG+TGG - chr4_4:61574785-61574804 None:intergenic 25.0%
!! GAATATTTTATAGCAATCAC+CGG - chr4_4:61574850-61574869 None:intergenic 25.0%
! CCGAAAGTTAGATAATAAAT+TGG - chr4_4:61574893-61574912 None:intergenic 25.0%
! TTAATTGAAAACGAGCTAAA+AGG + chr4_4:61575030-61575049 Msa0692870:CDS 25.0%
! TTACTCTGTTTGATTAACTT+GGG + chr4_4:61575232-61575251 Msa0692870:intron 25.0%
! AGTTGGAACCAAAATAAAAA+AGG + chr4_4:61575497-61575516 Msa0692870:intron 25.0%
!!! TTTTCTAGTCAAATAATCAG+GGG - chr4_4:61575811-61575830 None:intergenic 25.0%
!!! CATTTTCTAGTCAAATAATC+AGG - chr4_4:61575813-61575832 None:intergenic 25.0%
! GATTATTTGACTAGAAAATG+AGG + chr4_4:61575813-61575832 Msa0692870:intron 25.0%
! TAAACATTATACCATAAGCT+TGG - chr4_4:61576336-61576355 None:intergenic 25.0%
! ACTGTTAGAAATTTGGAAAA+AGG - chr4_4:61576669-61576688 None:intergenic 25.0%
! ATTATTGTCTCATCTGTATA+GGG - chr4_4:61576742-61576761 None:intergenic 25.0%
! AATTATTGTCTCATCTGTAT+AGG - chr4_4:61576743-61576762 None:intergenic 25.0%
! ATGAGACAATAATTGAACTT+GGG + chr4_4:61576749-61576768 Msa0692870:CDS 25.0%
! AATAATTGAACTTGGGAAAA+AGG + chr4_4:61576756-61576775 Msa0692870:CDS 25.0%
! ATAATTGAACTTGGGAAAAA+GGG + chr4_4:61576757-61576776 Msa0692870:CDS 25.0%
!! TAGAATCTGGAATAGAAAAT+TGG + chr4_4:61576967-61576986 Msa0692870:CDS 25.0%
!! AGAATCTGGAATAGAAAATT+GGG + chr4_4:61576968-61576987 Msa0692870:CDS 25.0%
!! GTATTTATATTTTCGTGTTC+TGG + chr4_4:61577125-61577144 Msa0692870:intron 25.0%
!! TGTGATCTAACAAAAAGTTT+TGG + chr4_4:61577371-61577390 Msa0692870:intron 25.0%
!!! AACAAAAAGTTTTGGTTTGT+TGG + chr4_4:61577379-61577398 Msa0692870:intron 25.0%
TAGCTTCAGGATTAACATTT+CGG - chr4_4:61572027-61572046 None:intergenic 30.0%
AAATGTTAATCCTGAAGCTA+TGG + chr4_4:61572027-61572046 Msa0692870:five_prime_UTR 30.0%
GCTTGATATTGTATTCTCTT+CGG - chr4_4:61572080-61572099 None:intergenic 30.0%
! AAGCAGATTCTTACAACTTT+TGG + chr4_4:61572096-61572115 Msa0692870:five_prime_UTR 30.0%
TGTCTTTATGAAGTTTATGG+GGG - chr4_4:61572170-61572189 None:intergenic 30.0%
ATTAATTCTTAAGCTCCCTA+AGG + chr4_4:61572197-61572216 Msa0692870:five_prime_UTR 30.0%
!!! GTTCTTTTTTAGTGTCCTTA+GGG - chr4_4:61572215-61572234 None:intergenic 30.0%
!!! TGTTCTTTTTTAGTGTCCTT+AGG - chr4_4:61572216-61572235 None:intergenic 30.0%
!! CTCTCTAAATAATGGACATT+GGG - chr4_4:61572378-61572397 None:intergenic 30.0%
!! TCTCTCTAAATAATGGACAT+TGG - chr4_4:61572379-61572398 None:intergenic 30.0%
TGTATTTGTGCAGTAATTGA+AGG + chr4_4:61572786-61572805 Msa0692870:intron 30.0%
AGTAATTGAAGGACAAGTTA+GGG + chr4_4:61572797-61572816 Msa0692870:intron 30.0%
TTTCTTGTAGTTTAGTTGGT+AGG + chr4_4:61573013-61573032 Msa0692870:intron 30.0%
!! AATAAAAGTTGGTACAAAGC+AGG - chr4_4:61573081-61573100 None:intergenic 30.0%
!! ATAGTTGGTAAATTTACTCC+AGG + chr4_4:61573234-61573253 Msa0692870:intron 30.0%
ATCTTATCATCACCAATAAG+AGG - chr4_4:61573363-61573382 None:intergenic 30.0%
!! CTTATTGGTGATGATAAGAT+CGG + chr4_4:61573363-61573382 Msa0692870:CDS 30.0%
! CATTTTCTGTACAATTATGC+AGG + chr4_4:61573538-61573557 Msa0692870:intron 30.0%
TGAAGAAAACTAAACAACCT+TGG - chr4_4:61573578-61573597 None:intergenic 30.0%
TGAAGAAAACTAAACAACCT+TGG - chr4_4:61573578-61573597 None:intergenic 30.0%
! CATTTTCTGTACAATTATGC+AGG + chr4_4:61573538-61573557 Msa0692870:intron 30.0%
! CTGATAATGATTCTCTATAC+AGG + chr4_4:61573812-61573831 Msa0692870:intron 30.0%
GTTAGATCACAATGTCAAAT+TGG + chr4_4:61573953-61573972 Msa0692870:intron 30.0%
!!! GTATTTTTACGAGTTTTAGG+AGG + chr4_4:61574011-61574030 Msa0692870:intron 30.0%
! ATAAATTTTGCACTAATGGG+TGG + chr4_4:61574103-61574122 Msa0692870:intron 30.0%
ATTATACTAGTAGTGCAGAA+AGG - chr4_4:61574204-61574223 None:intergenic 30.0%
AGATACCATTAAGTTAACCT+AGG + chr4_4:61574286-61574305 Msa0692870:intron 30.0%
ACTTCCTGTATATATTTCCT+AGG - chr4_4:61574306-61574325 None:intergenic 30.0%
AATATATACAGGAAGTGAGA+TGG + chr4_4:61574310-61574329 Msa0692870:intron 30.0%
ACAAACTTAGAAAATTGAGG+AGG + chr4_4:61574364-61574383 Msa0692870:intron 30.0%
! TGAATGTGTTTTGTACTTCT+TGG + chr4_4:61574554-61574573 Msa0692870:intron 30.0%
! GAATGTGTTTTGTACTTCTT+GGG + chr4_4:61574555-61574574 Msa0692870:intron 30.0%
AAGGAAAAATTGGTCATGAT+TGG - chr4_4:61574737-61574756 None:intergenic 30.0%
GATAATAGAATGATGACTGT+AGG + chr4_4:61575203-61575222 Msa0692870:intron 30.0%
CTTACTCTGTTTGATTAACT+TGG + chr4_4:61575231-61575250 Msa0692870:intron 30.0%
ATTATTCACAAAGAGCAAGT+TGG + chr4_4:61575480-61575499 Msa0692870:intron 30.0%
! GCGTTTATCTCTTATGATTT+TGG - chr4_4:61575525-61575544 None:intergenic 30.0%
GAAAAAAGAAGGTCCATAAT+AGG - chr4_4:61575627-61575646 None:intergenic 30.0%
TTCTACATACAGATCACAAA+TGG - chr4_4:61575683-61575702 None:intergenic 30.0%
! TTTCTAGTCAAATAATCAGG+GGG - chr4_4:61575810-61575829 None:intergenic 30.0%
TCTAGGTAAAGGAAAACTAA+TGG + chr4_4:61575846-61575865 Msa0692870:intron 30.0%
TGCATGTAAAATGCAAATAC+TGG + chr4_4:61575903-61575922 Msa0692870:intron 30.0%
TGCAACAAAAATTAGTCACT+AGG - chr4_4:61576117-61576136 None:intergenic 30.0%
! TAGTGACTAATTTTTGTTGC+AGG + chr4_4:61576116-61576135 Msa0692870:intron 30.0%
!! ATATTATGGCCTTGTTGATA+GGG - chr4_4:61576406-61576425 None:intergenic 30.0%
!! AATATTATGGCCTTGTTGAT+AGG - chr4_4:61576407-61576426 None:intergenic 30.0%
ACGAACTGTTCAGAATATTA+TGG - chr4_4:61576420-61576439 None:intergenic 30.0%
ACTCTTTGATATAGATTTCG+AGG + chr4_4:61576492-61576511 Msa0692870:intron 30.0%
GATGAGACAATAATTGAACT+TGG + chr4_4:61576748-61576767 Msa0692870:CDS 30.0%
TTGATGTTACCTAATTGGTA+CGG - chr4_4:61576800-61576819 None:intergenic 30.0%
GGTTAAGTGACACTAATATT+TGG + chr4_4:61576859-61576878 Msa0692870:intron 30.0%
ACACTAGAAGAAATTGATGT+TGG + chr4_4:61576928-61576947 Msa0692870:CDS 30.0%
TTGATGTTGGTACAAAGAAT+TGG + chr4_4:61576941-61576960 Msa0692870:intron 30.0%
!! AAAGAATTGGCTTTAGAATC+TGG + chr4_4:61576954-61576973 Msa0692870:intron 30.0%
! GAATCTGGAATAGAAAATTG+GGG + chr4_4:61576969-61576988 Msa0692870:CDS 30.0%
!! TTATATTTTCGTGTTCTGGA+AGG + chr4_4:61577129-61577148 Msa0692870:intron 30.0%
ATTCACGTTCACCTAAATAA+GGG - chr4_4:61577618-61577637 None:intergenic 30.0%
TGCTAATGGTATACATATAC+AGG - chr4_4:61577687-61577706 None:intergenic 30.0%
! ATGCTTTAGATACATACAAG+AGG - chr4_4:61577817-61577836 None:intergenic 30.0%
!!! TTCAGACTTGGTTTTGTTTT+TGG + chr4_4:61578025-61578044 Msa0692870:three_prime_UTR 30.0%
! AAGCTATGGATTGTGAAAGT+TGG + chr4_4:61572041-61572060 Msa0692870:five_prime_UTR 35.0%
! AGATTCTTACAACTTTTGGC+CGG + chr4_4:61572100-61572119 Msa0692870:five_prime_UTR 35.0%
GTCTTTATGAAGTTTATGGG+GGG - chr4_4:61572169-61572188 None:intergenic 35.0%
GGGAGCTTAAGAATTAATCT+TGG - chr4_4:61572195-61572214 None:intergenic 35.0%
CTCAATACTGTTGAGTTTCA+TGG - chr4_4:61572243-61572262 None:intergenic 35.0%
CTCTCTCTCTCTCTAAATAA+TGG - chr4_4:61572386-61572405 None:intergenic 35.0%
AGAAGGAGGTTGAAGAATTT+GGG - chr4_4:61572505-61572524 None:intergenic 35.0%
ACAAACGAATATACAGAAGG+AGG - chr4_4:61572519-61572538 None:intergenic 35.0%
TTACCTGATTCCCACAAATT+GGG - chr4_4:61572689-61572708 None:intergenic 35.0%
TTTACCTGATTCCCACAAAT+TGG - chr4_4:61572690-61572709 None:intergenic 35.0%
CAGTAATTGAAGGACAAGTT+AGG + chr4_4:61572796-61572815 Msa0692870:intron 35.0%
GTAATTGAAGGACAAGTTAG+GGG + chr4_4:61572798-61572817 Msa0692870:intron 35.0%
TATGAGCAAGAAGAAGTTGA+AGG - chr4_4:61572868-61572887 None:intergenic 35.0%
TGAAAAGGGAATACTTACAG+AGG - chr4_4:61572940-61572959 None:intergenic 35.0%
! TTTTTATAGGCTATTGCCAC+AGG + chr4_4:61573128-61573147 Msa0692870:intron 35.0%
CAGTTGAAAACTTGCATAGT+TGG + chr4_4:61573219-61573238 Msa0692870:CDS 35.0%
TTGGTAAATTTACTCCAGGA+TGG + chr4_4:61573238-61573257 Msa0692870:intron 35.0%
! AAGCTAGAGTATTACTGGAT+CGG - chr4_4:61573460-61573479 None:intergenic 35.0%
! TAGTTTTCTTCAAAAGCCAC+TGG + chr4_4:61573586-61573605 Msa0692870:CDS 35.0%
TGATAAAAAAACCTTGGCAG+TGG - chr4_4:61573667-61573686 None:intergenic 35.0%
TAATCTAGTAGTCACACACT+CGG + chr4_4:61574220-61574239 Msa0692870:intron 35.0%
! GGTATCTTTTCACATGAACA+CGG - chr4_4:61574273-61574292 None:intergenic 35.0%
TAACCTTGGAACTAACTCAT+CGG + chr4_4:61574642-61574661 Msa0692870:intron 35.0%
CTGGTCGAAATTGAAAATTG+TGG - chr4_4:61574794-61574813 None:intergenic 35.0%
! CAATTTTCAATTTCGACCAG+TGG + chr4_4:61574794-61574813 Msa0692870:CDS 35.0%
CTAGATACTCATCTTCTCTA+AGG - chr4_4:61574936-61574955 None:intergenic 35.0%
TGAAGGATACATAAAGGCAA+TGG + chr4_4:61575002-61575021 Msa0692870:CDS 35.0%
AAATGAAGTAGTACCTTCTC+TGG - chr4_4:61575066-61575085 None:intergenic 35.0%
TAGTCGGTATCAGATATTTC+TGG + chr4_4:61575176-61575195 Msa0692870:intron 35.0%
!! GGTATCAGATATTTCTGGTT+AGG + chr4_4:61575181-61575200 Msa0692870:intron 35.0%
GCAATGTGAATCCATAAAGA+AGG + chr4_4:61575412-61575431 Msa0692870:intron 35.0%
TCATTCATGGACCTTCTTTA+TGG - chr4_4:61575426-61575445 None:intergenic 35.0%
GGAGAGGAAATTATTTAGAC+CGG - chr4_4:61575772-61575791 None:intergenic 35.0%
ACTAGAAAATGAGGACTTGA+GGG + chr4_4:61575822-61575841 Msa0692870:intron 35.0%
GGTAAAGGAAAACTAATGGA+AGG + chr4_4:61575850-61575869 Msa0692870:intron 35.0%
AACCAAAATCGTACTAGTAG+AGG + chr4_4:61575958-61575977 Msa0692870:intron 35.0%
! ATCCTCTACTAGTACGATTT+TGG - chr4_4:61575963-61575982 None:intergenic 35.0%
GGAATGTGTGGATTTAATCA+TGG + chr4_4:61576218-61576237 Msa0692870:CDS 35.0%
ATAAGCAAGTGTGTATGCAT+TGG - chr4_4:61576268-61576287 None:intergenic 35.0%
TACTTTGGTGAATACCATAC+TGG - chr4_4:61576370-61576389 None:intergenic 35.0%
GTATTCACCAAAGTAGCAAT+TGG + chr4_4:61576375-61576394 Msa0692870:intron 35.0%
! GGAAATACCAATTGCTACTT+TGG - chr4_4:61576385-61576404 None:intergenic 35.0%
TTGGTATTTCCCTATCAACA+AGG + chr4_4:61576394-61576413 Msa0692870:intron 35.0%
AATTGTACCAATCTCCCTTA+TGG + chr4_4:61576613-61576632 Msa0692870:intron 35.0%
! TAAAAGCAGTAGCCACATTT+TGG - chr4_4:61576639-61576658 None:intergenic 35.0%
ATTCTCATACAGAGTAGAGT+TGG + chr4_4:61576697-61576716 Msa0692870:intron 35.0%
AAAGGGAGTAAAAAGTTTGC+TGG + chr4_4:61576774-61576793 Msa0692870:CDS 35.0%
!! CAAGGTTGATGTTACCTAAT+TGG - chr4_4:61576805-61576824 None:intergenic 35.0%
! ACATGTGTGTATCCTTTTTC+TGG - chr4_4:61577262-61577281 None:intergenic 35.0%
TCAAGTCATATAGATTCACG+TGG + chr4_4:61577317-61577336 Msa0692870:intron 35.0%
!!! TTGTTTTTAGAAGTCACCAC+TGG + chr4_4:61577561-61577580 Msa0692870:CDS 35.0%
CATTCACGTTCACCTAAATA+AGG - chr4_4:61577619-61577638 None:intergenic 35.0%
TAAATTACATTGCCGTTGTG+TGG - chr4_4:61577658-61577677 None:intergenic 35.0%
ATCGAAGTCATGCACTAAAA+AGG + chr4_4:61577725-61577744 Msa0692870:three_prime_UTR 35.0%
AAGTCTCTCATAAGTTCACA+AGG - chr4_4:61577899-61577918 None:intergenic 35.0%
ACAAGAGAGAGAGTTTGAAA+AGG + chr4_4:61577941-61577960 Msa0692870:three_prime_UTR 35.0%
CAAGAGAGAGAGTTTGAAAA+GGG + chr4_4:61577942-61577961 Msa0692870:three_prime_UTR 35.0%
!!! GACTGGTTTTATTTGTCTTC+CGG + chr4_4:61578083-61578102 Msa0692870:three_prime_UTR 35.0%
CTTTCACAATCCATAGCTTC+AGG - chr4_4:61572040-61572059 None:intergenic 40.0%
! TACAACTTTTGGCCGGAATA+AGG + chr4_4:61572107-61572126 Msa0692870:five_prime_UTR 40.0%
! TTTTGGCCGGAATAAGGAAT+GGG + chr4_4:61572113-61572132 Msa0692870:five_prime_UTR 40.0%
TGTCATCCCATTCCTTATTC+CGG - chr4_4:61572122-61572141 None:intergenic 40.0%
!!! ATGGGGGGATTTTTTGTTGT+GGG - chr4_4:61572154-61572173 None:intergenic 40.0%
!!! TATGGGGGGATTTTTTGTTG+TGG - chr4_4:61572155-61572174 None:intergenic 40.0%
CAGAAGGAGGTTGAAGAATT+TGG - chr4_4:61572506-61572525 None:intergenic 40.0%
AGATGGGTCACTAAGAAGAA+GGG - chr4_4:61572665-61572684 None:intergenic 40.0%
TAGATGGGTCACTAAGAAGA+AGG - chr4_4:61572666-61572685 None:intergenic 40.0%
TTCCCACAAATTGGGTAGAT+GGG - chr4_4:61572681-61572700 None:intergenic 40.0%
ATTCCCACAAATTGGGTAGA+TGG - chr4_4:61572682-61572701 None:intergenic 40.0%
! AATTACGAGAAGCACAAGTG+AGG - chr4_4:61572909-61572928 None:intergenic 40.0%
AGTGATTGCTTGGAAACCAA+GGG - chr4_4:61573276-61573295 None:intergenic 40.0%
TTTCCAAGCAATCACTCAAC+AGG + chr4_4:61573280-61573299 Msa0692870:CDS 40.0%
GTATCTGATACGCCTCTTAT+TGG + chr4_4:61573348-61573367 Msa0692870:CDS 40.0%
! GGAGTGTTATTGTTGAACCT+TGG + chr4_4:61573384-61573403 Msa0692870:CDS 40.0%
! GTGTTATTGTTGAACCTTGG+AGG + chr4_4:61573387-61573406 Msa0692870:CDS 40.0%
GTATTACTGGATCGGCAAAA+AGG - chr4_4:61573452-61573471 None:intergenic 40.0%
! TGCTGAAGCTAGAGTATTAC+TGG - chr4_4:61573465-61573484 None:intergenic 40.0%
AGGATATCATACGATTGCCA+AGG + chr4_4:61573558-61573577 Msa0692870:intron 40.0%
AGGATATCATACGATTGCCA+AGG + chr4_4:61573558-61573577 Msa0692870:intron 40.0%
! TGCCAACATACACTTTTGCT+GGG - chr4_4:61573875-61573894 None:intergenic 40.0%
! ATGCCAACATACACTTTTGC+TGG - chr4_4:61573876-61573895 None:intergenic 40.0%
TCAATAACCTCTTCGGTGAA+TGG - chr4_4:61573912-61573931 None:intergenic 40.0%
TACCAGCTCAATAACCTCTT+CGG - chr4_4:61573919-61573938 None:intergenic 40.0%
ATATACAGGAAGTGAGATGG+TGG + chr4_4:61574313-61574332 Msa0692870:intron 40.0%
GGAGAGGGTAAGATGTAAAA+TGG + chr4_4:61574334-61574353 Msa0692870:intron 40.0%
GGGTAAGATGTAAAATGGTG+AGG + chr4_4:61574339-61574358 Msa0692870:intron 40.0%
! GTGTTTTGTACTTCTTGGGA+CGG + chr4_4:61574559-61574578 Msa0692870:intron 40.0%
AACCTTGGAACTAACTCATC+GGG + chr4_4:61574643-61574662 Msa0692870:intron 40.0%
TAATACCTTCGTGGTACCAA+CGG + chr4_4:61574974-61574993 Msa0692870:CDS 40.0%
GCAACGTGAAGGATACATAA+AGG + chr4_4:61574996-61575015 Msa0692870:CDS 40.0%
!!! AGGTTTTGACTTACCAGAGA+AGG + chr4_4:61575050-61575069 Msa0692870:CDS 40.0%
GAAGCATAAGGACTATTGCA+GGG - chr4_4:61575547-61575566 None:intergenic 40.0%
! AGAAGCATAAGGACTATTGC+AGG - chr4_4:61575548-61575567 None:intergenic 40.0%
TCCTTATGCTTCTACTCTAG+AGG + chr4_4:61575555-61575574 Msa0692870:intron 40.0%
CCTTATGCTTCTACTCTAGA+GGG + chr4_4:61575556-61575575 Msa0692870:intron 40.0%
AAGAAGGTCCATAATAGGTC+AGG - chr4_4:61575622-61575641 None:intergenic 40.0%
TCCTCTAATAGATTTCGAGC+CGG + chr4_4:61575750-61575769 Msa0692870:intron 40.0%
GTCAAATAATCAGGGGGTTT+AGG - chr4_4:61575804-61575823 None:intergenic 40.0%
GACTAGAAAATGAGGACTTG+AGG + chr4_4:61575821-61575840 Msa0692870:intron 40.0%
! GAGGATCTGAAAGTGCAATT+AGG + chr4_4:61575977-61575996 Msa0692870:intron 40.0%
CTTATAAGGAGCTCGAGTTT+CGG - chr4_4:61576044-61576063 None:intergenic 40.0%
TCGAGCTCCTTATAAGCTTA+AGG + chr4_4:61576048-61576067 Msa0692870:intron 40.0%
GCTCCTTATAAGCTTAAGGT+TGG + chr4_4:61576052-61576071 Msa0692870:intron 40.0%
CCACCAACCTTAAGCTTATA+AGG - chr4_4:61576058-61576077 None:intergenic 40.0%
CCTTATAAGCTTAAGGTTGG+TGG + chr4_4:61576055-61576074 Msa0692870:intron 40.0%
!! ATAAGCTTAAGGTTGGTGGT+TGG + chr4_4:61576059-61576078 Msa0692870:intron 40.0%
!! TAAGCTTAAGGTTGGTGGTT+GGG + chr4_4:61576060-61576079 Msa0692870:intron 40.0%
ATGATATTCTTCAGCGCACA+TGG + chr4_4:61576141-61576160 Msa0692870:CDS 40.0%
TGATATTCTTCAGCGCACAT+GGG + chr4_4:61576142-61576161 Msa0692870:CDS 40.0%
TGATCCATACAAAGCAGAGA+TGG + chr4_4:61576194-61576213 Msa0692870:CDS 40.0%
TGCATACACACTTGCTTATC+AGG + chr4_4:61576269-61576288 Msa0692870:CDS 40.0%
AGTGTGCAAATCCAAGCTTA+TGG + chr4_4:61576322-61576341 Msa0692870:intron 40.0%
!! TTACCTTAGTTCTGCCAGTA+TGG + chr4_4:61576353-61576372 Msa0692870:intron 40.0%
ATACCATACTGGCAGAACTA+AGG - chr4_4:61576359-61576378 None:intergenic 40.0%
!! GCTGTTGATTAGTCTTTGCA+TGG - chr4_4:61576520-61576539 None:intergenic 40.0%
TGATGACTAAACGTAGTCCT+CGG - chr4_4:61576550-61576569 None:intergenic 40.0%
CGTTTAGTCATCATGTCACT+AGG + chr4_4:61576557-61576576 Msa0692870:intron 40.0%
TTAGTCATCATGTCACTAGG+TGG + chr4_4:61576560-61576579 Msa0692870:intron 40.0%
!! ATTTTGGCCATAAGGGAGAT+TGG - chr4_4:61576623-61576642 None:intergenic 40.0%
!! TAGCCACATTTTGGCCATAA+GGG - chr4_4:61576630-61576649 None:intergenic 40.0%
!! TAGGGTTTTAACCATTCCAC+AGG - chr4_4:61576724-61576743 None:intergenic 40.0%
!! AGTGTCACTTAACCTAGTGT+GGG - chr4_4:61576853-61576872 None:intergenic 40.0%
!! TAGTGTCACTTAACCTAGTG+TGG - chr4_4:61576854-61576873 None:intergenic 40.0%
ACCCACTTTCATTTCAGACT+TGG + chr4_4:61577016-61577035 Msa0692870:CDS 40.0%
! GCCAAGTCTGAAATGAAAGT+GGG - chr4_4:61577020-61577039 None:intergenic 40.0%
! TGCCAAGTCTGAAATGAAAG+TGG - chr4_4:61577021-61577040 None:intergenic 40.0%
ATTGAGAGTCTCCCATATGT+TGG + chr4_4:61577050-61577069 Msa0692870:CDS 40.0%
TCGAGCTTCAAGGTTTGAAA+CGG - chr4_4:61577084-61577103 None:intergenic 40.0%
!! AGAGATTAGTCTCTGACTCT+TGG + chr4_4:61577209-61577228 Msa0692870:intron 40.0%
!! TTTGGTTTGTTGGCAGTCTT+TGG + chr4_4:61577389-61577408 Msa0692870:intron 40.0%
AGCATATGACTCACAACGTA+GGG + chr4_4:61577443-61577462 Msa0692870:CDS 40.0%
ACCAATATTGGTGTGGGAAT+GGG + chr4_4:61577476-61577495 Msa0692870:CDS 40.0%
!! AAGAGTGCTGAAACTTGGAA+TGG + chr4_4:61577507-61577526 Msa0692870:CDS 40.0%
! GGGGAATATTGCCCTTATTT+AGG + chr4_4:61577604-61577623 Msa0692870:CDS 40.0%
AGCAGCATATGTGATGCTAA+TGG - chr4_4:61577701-61577720 None:intergenic 40.0%
TGGTTTAGACACAGCATTTG+TGG + chr4_4:61577760-61577779 Msa0692870:three_prime_UTR 40.0%
TTAGACACAGCATTTGTGGA+TGG + chr4_4:61577764-61577783 Msa0692870:three_prime_UTR 40.0%
GGAAGCAAACAAAATGAGCA+AGG - chr4_4:61577977-61577996 None:intergenic 40.0%
!! TGCTCATTTTGTTTGCTTCC+CGG + chr4_4:61577977-61577996 Msa0692870:three_prime_UTR 40.0%
! TGTCAACAACACAAGAGTAC+TGG + chr4_4:61578002-61578021 Msa0692870:three_prime_UTR 40.0%
TGGATTGTGAAAGTTGGAGC+TGG + chr4_4:61572047-61572066 Msa0692870:five_prime_UTR 45.0%
GGATTGTGAAAGTTGGAGCT+GGG + chr4_4:61572048-61572067 Msa0692870:five_prime_UTR 45.0%
! CTTTTGGCCGGAATAAGGAA+TGG + chr4_4:61572112-61572131 Msa0692870:five_prime_UTR 45.0%
!!! ATTTTTTGTTGTGGGGGTGG+GGG - chr4_4:61572146-61572165 None:intergenic 45.0%
!!! GATTTTTTGTTGTGGGGGTG+GGG - chr4_4:61572147-61572166 None:intergenic 45.0%
!!! GGATTTTTTGTTGTGGGGGT+GGG - chr4_4:61572148-61572167 None:intergenic 45.0%
!!! TGGGGGGATTTTTTGTTGTG+GGG - chr4_4:61572153-61572172 None:intergenic 45.0%
ATTACCATCTGCGGCAACAA+CGG - chr4_4:61572302-61572321 None:intergenic 45.0%
GTTTGCGGAATTACCATCTG+CGG - chr4_4:61572311-61572330 None:intergenic 45.0%
TTCCGCAAACTTCATCATCG+TGG + chr4_4:61572321-61572340 Msa0692870:five_prime_UTR 45.0%
ATGGGTCACTAAGAAGAAGG+GGG - chr4_4:61572663-61572682 None:intergenic 45.0%
GATGGGTCACTAAGAAGAAG+GGG - chr4_4:61572664-61572683 None:intergenic 45.0%
TGACCCATCTACCCAATTTG+TGG + chr4_4:61572675-61572694 Msa0692870:five_prime_UTR 45.0%
GACCCATCTACCCAATTTGT+GGG + chr4_4:61572676-61572695 Msa0692870:five_prime_UTR 45.0%
CTACCCAATTTGTGGGAATC+AGG + chr4_4:61572683-61572702 Msa0692870:five_prime_UTR 45.0%
! GAAGTTGAAGGAGCACGAAT+TGG - chr4_4:61572856-61572875 None:intergenic 45.0%
! ATACACCTTTTGAGCGGTAC+AGG - chr4_4:61573157-61573176 None:intergenic 45.0%
!! GCATCGATACACCTTTTGAG+CGG - chr4_4:61573163-61573182 None:intergenic 45.0%
GAGTGATTGCTTGGAAACCA+AGG - chr4_4:61573277-61573296 None:intergenic 45.0%
! AACAGGCACCTTTTACCTGT+GGG + chr4_4:61573297-61573316 Msa0692870:CDS 45.0%
CTAAAGCTCCCACAGGTAAA+AGG - chr4_4:61573308-61573327 None:intergenic 45.0%
GAAGTTACTAAAGCTCCCAC+AGG - chr4_4:61573315-61573334 None:intergenic 45.0%
! TGCACATCATCTAGAGTCTC+TGG - chr4_4:61573414-61573433 None:intergenic 45.0%
ATCCTGCATAATTGAGCCAG+TGG - chr4_4:61573605-61573624 None:intergenic 45.0%
TTCTTCAAAAGCCACTGCCA+AGG + chr4_4:61573653-61573672 Msa0692870:intron 45.0%
TCAGCACTAGAGCAATACGA+GGG - chr4_4:61573796-61573815 None:intergenic 45.0%
ATCAGCACTAGAGCAATACG+AGG - chr4_4:61573797-61573816 None:intergenic 45.0%
! GTCCCAGCAAAAGTGTATGT+TGG + chr4_4:61573870-61573889 Msa0692870:CDS 45.0%
TGTATGTTGGCATGCCTTAC+TGG + chr4_4:61573883-61573902 Msa0692870:CDS 45.0%
! TGCACTAATGGGTGGTTTAC+AGG + chr4_4:61574111-61574130 Msa0692870:intron 45.0%
TACCCGATGAGTTAGTTCCA+AGG - chr4_4:61574648-61574667 None:intergenic 45.0%
! TGGTTCAAGTTTGCGTCTCT+TGG + chr4_4:61574814-61574833 Msa0692870:CDS 45.0%
! GTCTCTTGGAGAGCATATTC+CGG + chr4_4:61574828-61574847 Msa0692870:CDS 45.0%
TCTAGTCAACATGCAGCACA+CGG + chr4_4:61574951-61574970 Msa0692870:CDS 45.0%
!! CCCTCTAGAGTAGAAGCATA+AGG - chr4_4:61575559-61575578 None:intergenic 45.0%
! TAGAGGGTGTAATCTGTGCA+TGG + chr4_4:61575572-61575591 Msa0692870:intron 45.0%
TCCTGAGTCCTGACCTATTA+TGG + chr4_4:61575611-61575630 Msa0692870:intron 45.0%
TCCATAATAGGTCAGGACTC+AGG - chr4_4:61575615-61575634 None:intergenic 45.0%
!! ACCGGCTCGAAATCTATTAG+AGG - chr4_4:61575754-61575773 None:intergenic 45.0%
! GTTTAGGACAGATTTGGGAG+AGG - chr4_4:61575788-61575807 None:intergenic 45.0%
! AGGGGGTTTAGGACAGATTT+GGG - chr4_4:61575793-61575812 None:intergenic 45.0%
AATGAGGACTTGAGGGTTCT+AGG + chr4_4:61575829-61575848 Msa0692870:intron 45.0%
!! GACTTGAGGGTTCTAGGTAA+AGG + chr4_4:61575835-61575854 Msa0692870:intron 45.0%
GATATTCTTCAGCGCACATG+GGG + chr4_4:61576143-61576162 Msa0692870:CDS 45.0%
TCCATACAAAGCAGAGATGG+AGG + chr4_4:61576197-61576216 Msa0692870:CDS 45.0%
TCCTCCATCTCTGCTTTGTA+TGG - chr4_4:61576201-61576220 None:intergenic 45.0%
TCTCCCTTATGGCCAAAATG+TGG + chr4_4:61576624-61576643 Msa0692870:intron 45.0%
!! GTAGCCACATTTTGGCCATA+AGG - chr4_4:61576631-61576650 None:intergenic 45.0%
TTCAAACCTTGAAGCTCGAC+AGG + chr4_4:61577085-61577104 Msa0692870:CDS 45.0%
AGTCAGAGACTAATCTCTCG+AGG - chr4_4:61577207-61577226 None:intergenic 45.0%
! ATTAGTCTCTGACTCTTGGC+CGG + chr4_4:61577213-61577232 Msa0692870:intron 45.0%
!! TCCTTTTTCTGGTGAGCTCA+GGG - chr4_4:61577251-61577270 None:intergenic 45.0%
!! ATCCTTTTTCTGGTGAGCTC+AGG - chr4_4:61577252-61577271 None:intergenic 45.0%
TAACTCTTCTACACTGCCCA+GGG - chr4_4:61577418-61577437 None:intergenic 45.0%
ATAACTCTTCTACACTGCCC+AGG - chr4_4:61577419-61577438 None:intergenic 45.0%
GGGCAGTGTAGAAGAGTTAT+TGG + chr4_4:61577419-61577438 Msa0692870:CDS 45.0%
CAGCATATGACTCACAACGT+AGG + chr4_4:61577442-61577461 Msa0692870:CDS 45.0%
CATTCCCACACCAATATTGG+TGG - chr4_4:61577477-61577496 None:intergenic 45.0%
CACCAATATTGGTGTGGGAA+TGG + chr4_4:61577475-61577494 Msa0692870:CDS 45.0%
CCAATATTGGTGTGGGAATG+GGG + chr4_4:61577477-61577496 Msa0692870:CDS 45.0%
!! GGACAAAGAGTGCTGAAACT+TGG + chr4_4:61577502-61577521 Msa0692870:CDS 45.0%
TTTAGAAGTCACCACTGGAG+AGG + chr4_4:61577566-61577585 Msa0692870:CDS 45.0%
TTAGAAGTCACCACTGGAGA+GGG + chr4_4:61577567-61577586 Msa0692870:CDS 45.0%
! AGAGGGATTTTTGCACCAGT+GGG + chr4_4:61577584-61577603 Msa0692870:CDS 45.0%
ATAAGGGCAATATTCCCCAC+TGG - chr4_4:61577602-61577621 None:intergenic 45.0%
TTACATTGCCGTTGTGTGGA+GGG - chr4_4:61577654-61577673 None:intergenic 45.0%
ATTACATTGCCGTTGTGTGG+AGG - chr4_4:61577655-61577674 None:intergenic 45.0%
! TCTTGTGTTGTTGACAAGCC+GGG - chr4_4:61577998-61578017 None:intergenic 45.0%
! CTCTTGTGTTGTTGACAAGC+CGG - chr4_4:61577999-61578018 None:intergenic 45.0%
!! CAAGAGTACTGGTTCAGACT+TGG + chr4_4:61578013-61578032 Msa0692870:three_prime_UTR 45.0%
!!! TTTTTTGTTGTGGGGGTGGG+GGG - chr4_4:61572145-61572164 None:intergenic 50.0%
!!! GGGATTTTTTGTTGTGGGGG+TGG - chr4_4:61572149-61572168 None:intergenic 50.0%
!!! GGGGGGATTTTTTGTTGTGG+GGG - chr4_4:61572152-61572171 None:intergenic 50.0%
! GCACGATTTGTCAAGCGTTG+AGG + chr4_4:61572265-61572284 Msa0692870:five_prime_UTR 50.0%
CGCCACGATGATGAAGTTTG+CGG - chr4_4:61572326-61572345 None:intergenic 50.0%
CGCAAACTTCATCATCGTGG+CGG + chr4_4:61572324-61572343 Msa0692870:five_prime_UTR 50.0%
GCACAAGTGAGGCAAGAATG+AGG - chr4_4:61572898-61572917 None:intergenic 50.0%
CGTTACTAGAAACCTCCGTG+TGG - chr4_4:61573194-61573213 None:intergenic 50.0%
! ATGGTCTGAAGCACAACCCT+TGG + chr4_4:61573257-61573276 Msa0692870:CDS 50.0%
GTGCCTGTTGAGTGATTGCT+TGG - chr4_4:61573286-61573305 None:intergenic 50.0%
! CAACAGGCACCTTTTACCTG+TGG + chr4_4:61573296-61573315 Msa0692870:CDS 50.0%
!! AGCCACTGGCTCAATTATGC+AGG + chr4_4:61573600-61573619 Msa0692870:CDS 50.0%
TCGGTGAATGGATGCCAGTA+AGG - chr4_4:61573900-61573919 None:intergenic 50.0%
CACCGAAGAGGTTATTGAGC+TGG + chr4_4:61573914-61573933 Msa0692870:CDS 50.0%
GTGGTTTACAGGCAGCAGTT+TGG + chr4_4:61574122-61574141 Msa0692870:intron 50.0%
!! AGGAAGTGAGATGGTGGAGA+GGG + chr4_4:61574319-61574338 Msa0692870:intron 50.0%
GAGACGCAAACTTGAACCAC+TGG - chr4_4:61574813-61574832 None:intergenic 50.0%
AGCACACGGTAATACCTTCG+TGG + chr4_4:61574965-61574984 Msa0692870:CDS 50.0%
TGTATCCTTCACGTTGCCGT+TGG - chr4_4:61574993-61575012 None:intergenic 50.0%
TAGGTCAGGACTCAGGAGAA+TGG - chr4_4:61575608-61575627 None:intergenic 50.0%
! CAGGGGGTTTAGGACAGATT+TGG - chr4_4:61575794-61575813 None:intergenic 50.0%
TCCAGTTGCATACGTGGAAG+AGG + chr4_4:61576167-61576186 Msa0692870:CDS 50.0%
AGCAGAGATGGAGGAATGTG+TGG + chr4_4:61576206-61576225 Msa0692870:CDS 50.0%
ACAGAGTAGAGTTGGACCTG+TGG + chr4_4:61576705-61576724 Msa0692870:intron 50.0%
GTAGAGTTGGACCTGTGGAA+TGG + chr4_4:61576710-61576729 Msa0692870:CDS 50.0%
! GTTTGCTGGCCGTACCAATT+AGG + chr4_4:61576788-61576807 Msa0692870:CDS 50.0%
ATTCCTCTCTGACCCACACT+AGG + chr4_4:61576838-61576857 Msa0692870:intron 50.0%
TAACCTAGTGTGGGTCAGAG+AGG - chr4_4:61576844-61576863 None:intergenic 50.0%
TCTCCCATATGTTGGTGCGA+TGG + chr4_4:61577058-61577077 Msa0692870:CDS 50.0%
TTAGTCTCTGACTCTTGGCC+GGG + chr4_4:61577214-61577233 Msa0692870:intron 50.0%
CTCAGGGTTATCCTTATCCC+CGG - chr4_4:61577235-61577254 None:intergenic 50.0%
ACCCTGAGCTCACCAGAAAA+AGG + chr4_4:61577247-61577266 Msa0692870:intron 50.0%
AACTCTTCTACACTGCCCAG+GGG - chr4_4:61577417-61577436 None:intergenic 50.0%
GGAGTTGCCACCACCAATAT+TGG + chr4_4:61577464-61577483 Msa0692870:CDS 50.0%
TGCCACCACCAATATTGGTG+TGG + chr4_4:61577469-61577488 Msa0692870:CDS 50.0%
GCCACCACCAATATTGGTGT+GGG + chr4_4:61577470-61577489 Msa0692870:CDS 50.0%
TCCCACACCAATATTGGTGG+TGG - chr4_4:61577474-61577493 None:intergenic 50.0%
CCCCATTCCCACACCAATAT+TGG - chr4_4:61577480-61577499 None:intergenic 50.0%
TATTGGTGTGGGAATGGGGA+TGG + chr4_4:61577481-61577500 Msa0692870:CDS 50.0%
GTGCAAAAATCCCTCTCCAG+TGG - chr4_4:61577580-61577599 None:intergenic 50.0%
! GAGAGGGATTTTTGCACCAG+TGG + chr4_4:61577583-61577602 Msa0692870:CDS 50.0%
! GAGGGATTTTTGCACCAGTG+GGG + chr4_4:61577585-61577604 Msa0692870:CDS 50.0%
TGAAAGTTGGAGCTGGGCTG+TGG + chr4_4:61572054-61572073 Msa0692870:five_prime_UTR 55.0%
GGCAACCTGTACCGCTCAAA+AGG + chr4_4:61573149-61573168 Msa0692870:CDS 55.0%
! AAGGTGTATCGATGCTCCCG+AGG + chr4_4:61573168-61573187 Msa0692870:CDS 55.0%
TAGAAACCTCCGTGTGGCCT+CGG - chr4_4:61573188-61573207 None:intergenic 55.0%
GGTTGTGCTTCAGACCATCC+TGG - chr4_4:61573255-61573274 None:intergenic 55.0%
CTAGAGTCTCTGGACCTCCA+AGG - chr4_4:61573404-61573423 None:intergenic 55.0%
CTGGCATCCATTCACCGAAG+AGG + chr4_4:61573902-61573921 Msa0692870:CDS 55.0%
!! CAGGAAGTGAGATGGTGGAG+AGG + chr4_4:61574318-61574337 Msa0692870:intron 55.0%
TGGTACCAACGGCAACGTGA+AGG + chr4_4:61574985-61575004 Msa0692870:CDS 55.0%
TGGGGTTCCAGTTGCATACG+TGG + chr4_4:61576161-61576180 Msa0692870:CDS 55.0%
GCCTCTTCCACGTATGCAAC+TGG - chr4_4:61576171-61576190 None:intergenic 55.0%
GTTGCATACGTGGAAGAGGC+TGG + chr4_4:61576171-61576190 Msa0692870:CDS 55.0%
AATCAACAGCGTTCTCGCCG+AGG + chr4_4:61576530-61576549 Msa0692870:intron 55.0%
CGGCCATCGCACCAACATAT+GGG - chr4_4:61577064-61577083 None:intergenic 55.0%
ACGGCCATCGCACCAACATA+TGG - chr4_4:61577065-61577084 None:intergenic 55.0%
AGCGTACCTGTCGAGCTTCA+AGG - chr4_4:61577094-61577113 None:intergenic 55.0%
TAGTCTCTGACTCTTGGCCG+GGG + chr4_4:61577215-61577234 Msa0692870:intron 55.0%
! TTGGCAGTCTTTGGTTCCCC+TGG + chr4_4:61577398-61577417 Msa0692870:intron 55.0%
! TGGCAGTCTTTGGTTCCCCT+GGG + chr4_4:61577399-61577418 Msa0692870:intron 55.0%
CTACGCTACCCTCCACACAA+CGG + chr4_4:61577643-61577662 Msa0692870:three_prime_UTR 55.0%
ACCATCTGCGGCAACAACGG+CGG - chr4_4:61572299-61572318 None:intergenic 60.0%
TGAGCGGTACAGGTTGCCTG+TGG - chr4_4:61573147-61573166 None:intergenic 60.0%
AGAAACCTCCGTGTGGCCTC+GGG - chr4_4:61573187-61573206 None:intergenic 60.0%
CGTTGCCGTTGGTACCACGA+AGG - chr4_4:61574982-61575001 None:intergenic 60.0%
CTGACTCTTGGCCGGGGATA+AGG + chr4_4:61577221-61577240 Msa0692870:intron 60.0%
CGTTGTGTGGAGGGTAGCGT+AGG - chr4_4:61577645-61577664 None:intergenic 60.0%
TCCGCCGTTGTTGCCGCAGA+TGG + chr4_4:61572295-61572314 Msa0692870:five_prime_UTR 65.0%
TCGATGCTCCCGAGGCCACA+CGG + chr4_4:61573176-61573195 Msa0692870:CDS 65.0%
ATGCTCCCGAGGCCACACGG+AGG + chr4_4:61573179-61573198 Msa0692870:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61572002 61578107 61572002 ID=Msa0692870;Name=Msa0692870
chr4_4 mRNA 61572002 61578107 61572002 ID=Msa0692870-mRNA-1;Parent=Msa0692870;Name=Msa0692870-mRNA-1;_AED=0.17;_eAED=0.17;_QI=748|0.66|0.53|1|0.58|0.53|13|478|507
chr4_4 exon 61572002 61572704 61572002 ID=Msa0692870-mRNA-1:exon:17053;Parent=Msa0692870-mRNA-1
chr4_4 exon 61572799 61572941 61572799 ID=Msa0692870-mRNA-1:exon:17054;Parent=Msa0692870-mRNA-1
chr4_4 exon 61573137 61573240 61573137 ID=Msa0692870-mRNA-1:exon:17055;Parent=Msa0692870-mRNA-1
chr4_4 exon 61573256 61573464 61573256 ID=Msa0692870-mRNA-1:exon:17056;Parent=Msa0692870-mRNA-1
chr4_4 exon 61573560 61573649 61573560 ID=Msa0692870-mRNA-1:exon:17057;Parent=Msa0692870-mRNA-1
chr4_4 exon 61573834 61573935 61573834 ID=Msa0692870-mRNA-1:exon:17058;Parent=Msa0692870-mRNA-1
chr4_4 exon 61574734 61574849 61574734 ID=Msa0692870-mRNA-1:exon:17059;Parent=Msa0692870-mRNA-1
chr4_4 exon 61574939 61575071 61574939 ID=Msa0692870-mRNA-1:exon:17060;Parent=Msa0692870-mRNA-1
chr4_4 exon 61576138 61576290 61576138 ID=Msa0692870-mRNA-1:exon:17061;Parent=Msa0692870-mRNA-1
chr4_4 exon 61576709 61576809 61576709 ID=Msa0692870-mRNA-1:exon:17062;Parent=Msa0692870-mRNA-1
chr4_4 exon 61576906 61576949 61576906 ID=Msa0692870-mRNA-1:exon:17063;Parent=Msa0692870-mRNA-1
chr4_4 exon 61576958 61577106 61576958 ID=Msa0692870-mRNA-1:exon:17064;Parent=Msa0692870-mRNA-1
chr4_4 exon 61577405 61578107 61577405 ID=Msa0692870-mRNA-1:exon:17065;Parent=Msa0692870-mRNA-1
chr4_4 five_prime_UTR 61572002 61572704 61572002 ID=Msa0692870-mRNA-1:five_prime_utr;Parent=Msa0692870-mRNA-1
chr4_4 five_prime_UTR 61572799 61572843 61572799 ID=Msa0692870-mRNA-1:five_prime_utr;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61572844 61572941 61572844 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61573137 61573240 61573137 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61573256 61573464 61573256 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61573560 61573649 61573560 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61573834 61573935 61573834 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61574734 61574849 61574734 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61574939 61575071 61574939 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61576138 61576290 61576138 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61576709 61576809 61576709 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61576906 61576949 61576906 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61576958 61577106 61576958 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 CDS 61577405 61577629 61577405 ID=Msa0692870-mRNA-1:cds;Parent=Msa0692870-mRNA-1
chr4_4 three_prime_UTR 61577630 61578107 61577630 ID=Msa0692870-mRNA-1:three_prime_utr;Parent=Msa0692870-mRNA-1
Gene Sequence

>Msa0692870

ATGAATTCTCCAATTCGTGCTCCTTCAACTTCTTCTTGCTCATATATTCGTCCTCATTCTTGCCTCACTTGTGCTTCTCGTAATTTCAAGCTTCCTCTGCTATTGCCACAGGCAACCTGTACCGCTCAAAAGGTGTATCGATGCTCCCGAGGCCACACGGAGGTTTCTAGTAACGCTAATCAGTTGAAAACTTGCATAGTTGGATGGTCTGAAGCACAACCCTTGGTTTCCAAGCAATCACTCAACAGGCACCTTTTACCTGTGGGAGCTTTAGTAACTTCAACAACTCAAGATGTATCTGATACGCCTCTTATTGGTGATGATAAGATCGGAGTGTTATTGTTGAACCTTGGAGGTCCAGAGACTCTAGATGATGTGCAGCCGTTTTTGTTTAACCTTTTTGCCGATCCAGATATCATACGATTGCCAAGGTTGTTTAGTTTTCTTCAAAAGCCACTGGCTCAATTATGCAGGATATCATACGATTGCCAAGGTTGTTTAGCTGAAGAGTTAAGAAAATCTCTATTTGAAAAGAATGTCCCAGCAAAAGTGTATGTTGGCATGCCTTACTGGCATCCATTCACCGAAGAGGTTATTGAGCTGCCAATCATGACCAATTTTTCCTTTGAAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCGACCAGTGGTTCAAGTTTGCGTCTCTTGGAGAGCATATTCCGAGAAGATGAGTATCTAGTCAACATGCAGCACACGGTAATACCTTCGTGGTACCAACGGCAACGTGAAGGATACATAAAGGCAATGGCAAATTTAATTGAAAACGAGCTAAAAGGTTTTGACTTACCAGAGAAGGTCATGATATTCTTCAGCGCACATGGGGTTCCAGTTGCATACGTGGAAGAGGCTGGTGATCCATACAAAGCAGAGATGGAGGAATGTGTGGATTTAATCATGGAAGAGCTTGAGAAAAGAAAGATAACCAATGCATACACACTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGATGAGACAATAATTGAACTTGGGAAAAAGGGAGTAAAAAGTTTGCTGGCCGTACCAATTAGCTTTGTCAGTGAACATATTGAAACACTAGAAGAAATTGATGTTGAATTGGCTTTAGAATCTGGAATAGAAAATTGGGGCCGTGTTCCTGCTCTTGGATGTGAACCCACTTTCATTTCAGACTTGGCAGATGCTGTAATTGAGAGTCTCCCATATGTTGGTGCGATGGCCGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCCCTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGACTCACAACGTAGGGAGTTGCCACCACCAATATTGGTGTGGGAATGGGGATGGACAAAGAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGATTGCTGTGTTGCTTCTGTTGTTTTTAGAAGTCACCACTGGAGAGGGATTTTTGCACCAGTGGGGAATATTGCCCTTATTTAGGTGA
Protein sequence

>Msa0692870

MNSPIRAPSTSSCSYIRPHSCLTCASRNFKLPLLLPQATCTAQKVYRCSRGHTEVSSNANQLKTCIVGWSEAQPLVSKQSLNRHLLPVGALVTSTTQDVSDTPLIGDDKIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQLCRISYDCQGCLAEELRKSLFEKNVPAKVYVGMPYWHPFTEEVIELPIMTNFSFEITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQRQREGYIKAMANLIENELKGFDLPEKVMIFFSAHGVPVAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVELALESGIENWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPILVWEWGWTKSAETWNGRAAMIAVLLLLFLEVTTGEGFLHQWGILPLFR*