AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0558010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558010 MtrunA17_Chr4g0047451 94.743 913 48 0 1 913 1 913 0.0 1792
Msa0558010 MtrunA17_Chr5g0428751 29.862 797 481 21 33 791 43 799 1.13e-84 289
Msa0558010 MtrunA17_Chr1g0168681 29.557 203 131 3 414 605 743 944 3.33e-17 87.0
Msa0558010 MtrunA17_Chr1g0203461 33.858 127 82 2 428 553 798 923 4.58e-15 80.1
Msa0558010 MtrunA17_Chr7g0269931 25.667 300 173 10 398 665 998 1279 1.33e-14 78.6
Msa0558010 MtrunA17_Chr4g0062701 24.766 214 145 4 414 612 649 861 5.43e-13 73.2
Msa0558010 MtrunA17_Chr6g0485261 25.820 244 149 7 413 630 878 1115 7.95e-13 72.8
Msa0558010 MtrunA17_Chr5g0399431 26.087 161 112 3 397 552 262 420 2.05e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558010 AT1G65070.2 53.527 893 352 12 28 913 40 876 0.0 900
Msa0558010 AT1G65070.4 53.486 875 344 12 28 895 40 858 0.0 876
Msa0558010 AT1G65070.1 55.052 772 295 8 28 794 40 764 0.0 813
Msa0558010 AT1G65070.3 56.646 632 225 7 28 655 40 626 0.0 687
Msa0558010 AT5G54090.1 29.827 808 473 23 20 784 34 790 2.43e-81 280
Msa0558010 AT3G24320.2 27.723 202 134 3 415 605 498 698 1.60e-16 85.1
Msa0558010 AT3G24320.1 27.723 202 134 3 415 605 743 943 2.08e-16 85.1
Msa0558010 AT4G25540.1 32.624 141 92 3 414 552 799 938 1.11e-14 79.3
Msa0558010 AT4G02070.1 32.278 158 102 4 396 550 1047 1202 9.26e-13 73.2
Msa0558010 AT4G02070.2 32.278 158 102 4 396 550 1044 1199 1.02e-12 73.2
Msa0558010 AT3G18524.1 29.252 147 99 4 414 557 648 792 6.31e-12 70.1
Msa0558010 AT4G17380.2 28.462 130 92 1 423 552 545 673 1.22e-11 69.3
Msa0558010 AT4G17380.1 28.462 130 92 1 423 552 545 673 1.39e-11 68.9
Msa0558010 AT3G24495.1 26.126 222 142 6 412 612 826 1046 1.92e-11 68.9

Find 309 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4_1:+56594394 None:intergenic
ATCAATCGAGTGACTAATTT+TGG 0.146698 4_1:-56594251 Msa0558010:three_prime_UTR
TCTGCTTGCTTATTCTTTAC+AGG 0.179462 4_1:-56594277 Msa0558010:three_prime_UTR
CTCTGGAGCAACATACTTTA+TGG 0.200265 4_1:-56597779 Msa0558010:CDS
CTCCGCTCTTGCTGCTGTTC+TGG 0.212629 4_1:+56596569 None:intergenic
AAACCTTGCAACCAACTTAT+AGG 0.224407 4_1:-56596700 Msa0558010:CDS
ACACTTGTTGGTATAATTAA+AGG 0.234769 4_1:-56594203 Msa0558010:three_prime_UTR
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4_1:-56598070 Msa0558010:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4_1:-56595866 Msa0558010:CDS
CTTTGCTAGTAATTAGTTAC+TGG 0.262149 4_1:-56593268 Msa0558010:three_prime_UTR
ACATCATATACTCCACAATT+TGG 0.262844 4_1:-56595733 Msa0558010:CDS
CTTGTTCTCATTGATGAAAT+TGG 0.280062 4_1:-56596887 Msa0558010:CDS
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4_1:-56594394 Msa0558010:CDS
ATCTGATTTGGGCTATTAAT+AGG 0.289526 4_1:+56593989 None:intergenic
TTGCATAGATTGCAATCTTT+TGG 0.292449 4_1:-56598025 Msa0558010:CDS
CTAGAATGTGCGTGGGCATC+AGG 0.296994 4_1:-56597852 Msa0558010:CDS
AGAGTACCTAAACTGAAAAT+TGG 0.301495 4_1:+56597553 None:intergenic
TCATCAGATCAGAACGAAAA+AGG 0.302479 4_1:-56597969 Msa0558010:CDS
CAGCAGCTTGGACCTGCTTT+TGG 0.304897 4_1:-56594312 Msa0558010:three_prime_UTR
ACAACCTTCTGTTGTGGATT+GGG 0.306479 4_1:+56599423 None:intergenic
ATTCTCTCCGTTGCTGTTTC+CGG 0.310263 4_1:-56599042 Msa0558010:CDS
GTAATAGTGGGAATCTGATT+TGG 0.311339 4_1:+56593977 None:intergenic
AGCAATGGTGATATTTATTA+TGG 0.313667 4_1:-56594616 Msa0558010:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4_1:-56598069 Msa0558010:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4_1:+56595920 None:intergenic
CTCTGCCACGGGCTCGCACT+TGG 0.318413 4_1:+56593540 None:intergenic
TGCATTCACTTCCACTTCAA+TGG 0.324498 4_1:-56599205 Msa0558010:CDS
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4_1:+56597160 None:intergenic
AACCTTGCAACCAACTTATA+GGG 0.326348 4_1:-56596699 Msa0558010:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4_1:+56597189 None:intergenic
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4_1:+56599127 None:intergenic
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4_1:+56599332 None:intergenic
TGCTGTTAGCTTATTGCAAT+AGG 0.342564 4_1:+56594330 None:intergenic
GACCTTATCCTTGCGGATAT+TGG 0.343828 4_1:-56597142 Msa0558010:CDS
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4_1:+56594592 None:intergenic
TCCTTGCAATACGCGGCCTT+TGG 0.350706 4_1:+56593445 None:intergenic
TACAACCTTCTGTTGTGGAT+TGG 0.351481 4_1:+56599422 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4_1:+56597874 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4_1:+56599333 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4_1:-56595865 Msa0558010:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4_1:-56597644 Msa0558010:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4_1:+56599321 None:intergenic
ACGGGCGTTGTTGGCGGCGG+AGG 0.376941 4_1:+56599179 None:intergenic
GATGCCCGGCCTGAGCTCAT+TGG 0.380731 4_1:+56593738 None:intergenic
TCTGAGTTGGGTAATGGAAA+TGG 0.381561 4_1:-56597376 Msa0558010:CDS
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4_1:+56599160 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4_1:+56594496 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4_1:-56595554 Msa0558010:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4_1:+56595986 None:intergenic
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4_1:-56597796 Msa0558010:CDS
AACCAACTTATAGGGTTCTC+TGG 0.388468 4_1:-56596691 Msa0558010:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4_1:-56594478 Msa0558010:CDS
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4_1:-56598064 Msa0558010:CDS
GAAACAATCTTGGTACAGTA+TGG 0.389406 4_1:-56595643 Msa0558010:CDS
AAGTACAATGCATCGATTAT+TGG 0.396471 4_1:-56593421 Msa0558010:three_prime_UTR
GCATTCACTTCCACTTCAAT+GGG 0.396644 4_1:-56599204 Msa0558010:CDS
AATTCTTCTGAGTTGGGTAA+TGG 0.397648 4_1:-56597382 Msa0558010:CDS
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4_1:-56598056 Msa0558010:CDS
ATCTCCCTAAGCTAAAAGTT+TGG 0.402641 4_1:+56594063 None:intergenic
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4_1:+56599320 None:intergenic
AATGCTCTATCAGTCATTAC+AGG 0.405453 4_1:-56596543 Msa0558010:CDS
GGCCTAATCGTACCTGTCTT+TGG 0.406122 4_1:-56593377 Msa0558010:three_prime_UTR
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4_1:-56595706 Msa0558010:CDS
GTTCACAATTTCTGCATGAA+TGG 0.416425 4_1:+56596478 None:intergenic
GACGGGTAAACGGGCGTTGT+TGG 0.416611 4_1:+56599170 None:intergenic
GTCATCTCAGGACCTAATAC+TGG 0.416951 4_1:-56597265 Msa0558010:CDS
GCTGTTAGCTTATTGCAATA+GGG 0.420312 4_1:+56594331 None:intergenic
GTTGACTTCAAAATTAGATC+TGG 0.420665 4_1:-56597301 Msa0558010:CDS
TATGGCAAAGGAAGCTCAAC+AGG 0.420669 4_1:-56595944 Msa0558010:CDS
GGGAGATCATAACAGAGAAT+AGG 0.421502 4_1:-56594047 Msa0558010:three_prime_UTR
CTCCAATATCCGCAAGGATA+AGG 0.422194 4_1:+56597140 None:intergenic
TGTCTTTGGTGCATACTGAT+AGG 0.425729 4_1:-56593363 Msa0558010:three_prime_UTR
TGCTGATCTAAGTACTTTGA+AGG 0.425952 4_1:-56596768 Msa0558010:CDS
TGCTCCAATGAGCTCAGGCC+GGG 0.426132 4_1:-56593742 Msa0558010:three_prime_UTR
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4_1:-56594490 Msa0558010:CDS
ATTTGAACAACATGGAAGTT+AGG 0.428354 4_1:-56597738 Msa0558010:CDS
GGCAGAGCAGACTGTGGCTT+CGG 0.429255 4_1:-56593524 Msa0558010:three_prime_UTR
TAATAGTGGGAATCTGATTT+GGG 0.431781 4_1:+56593978 None:intergenic
ACTAGAGTGGTGGTCATCTC+AGG 0.432380 4_1:-56597277 Msa0558010:CDS
TAATACATGGGATGGGCACT+GGG 0.432402 4_1:-56594477 Msa0558010:CDS
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4_1:-56597389 Msa0558010:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4_1:+56599302 None:intergenic
GGAGATCATAACAGAGAATA+GGG 0.434447 4_1:-56594046 Msa0558010:three_prime_UTR
ACAGGTCCAACAAGAGTTAG+AGG 0.437103 4_1:-56595926 Msa0558010:CDS
CTTCGAACGGTGCAAAGCTC+GGG 0.437748 4_1:+56599003 None:intergenic
GCATTCAGAACTATACCTTC+TGG 0.438902 4_1:+56597808 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4_1:+56598055 None:intergenic
GAAGAACACTCGCTGCTGCC+AGG 0.439097 4_1:-56598984 Msa0558010:CDS
TCTGGAAATTCTTCTGAGTT+GGG 0.439306 4_1:-56597388 Msa0558010:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4_1:-56597583 Msa0558010:CDS
AATCAAGACCACCACTGTGC+TGG 0.442307 4_1:-56593622 Msa0558010:three_prime_UTR
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4_1:-56595707 Msa0558010:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4_1:+56595559 None:intergenic
CGTAGGCACCGTCTCTGAAA+TGG 0.448051 4_1:-56593578 Msa0558010:three_prime_UTR
CCTATGCTCAATGGATGAAT+GGG 0.451608 4_1:-56597582 Msa0558010:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4_1:+56594385 None:intergenic
GAGCTCATTGGAGCACTCCT+TGG 0.453654 4_1:+56593750 None:intergenic
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4_1:-56597168 Msa0558010:CDS
CGATTTAACGGTAAATATTG+AGG 0.455289 4_1:-56597476 Msa0558010:CDS
ACCACCACTGTGCTGGGCAC+AGG 0.455798 4_1:-56593615 Msa0558010:three_prime_UTR
AGCACAGTGGTGGTCTTGAT+TGG 0.457759 4_1:+56593624 None:intergenic
AATCCTGGACTCTTTATTGA+AGG 0.459366 4_1:-56597938 Msa0558010:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4_1:-56595962 Msa0558010:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4_1:+56595836 None:intergenic
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4_1:-56597713 Msa0558010:CDS
ACCAACTTATAGGGTTCTCT+GGG 0.467907 4_1:-56596690 Msa0558010:CDS
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4_1:-56597230 Msa0558010:CDS
CTTATTGCAATAGGGGAATG+AGG 0.468243 4_1:+56594339 None:intergenic
ACATACGTAAACACACTTGT+TGG 0.471238 4_1:-56594215 Msa0558010:three_prime_UTR
TGCAGAAAGTTGCTTGCATA+TGG 0.473675 4_1:+56599224 None:intergenic
AGCCACAGTCTGCTCTGCCA+CGG 0.473871 4_1:+56593528 None:intergenic
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4_1:+56599334 None:intergenic
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4_1:+56595577 None:intergenic
CCCTGTGCCCAGCACAGTGG+TGG 0.477450 4_1:+56593614 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4_1:+56599161 None:intergenic
GTATGTTGCTCCAGAGCTGC+TGG 0.478675 4_1:+56597786 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4_1:-56595673 Msa0558010:CDS
GGGTAAACGGGCGTTGTTGG+CGG 0.478868 4_1:+56599173 None:intergenic
CAATGACATTGCGGTCGTGC+AGG 0.479424 4_1:-56597503 Msa0558010:CDS
CTCATTGATGAAATTGGTAG+TGG 0.480474 4_1:-56596881 Msa0558010:CDS
TAAACGGGCGTTGTTGGCGG+CGG 0.480719 4_1:+56599176 None:intergenic
CCACCACTGTGCTGGGCACA+GGG 0.482069 4_1:-56593614 Msa0558010:three_prime_UTR
ACGGTGCCTACGTTGGCAAC+GGG 0.482091 4_1:+56593589 None:intergenic
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4_1:-56595908 Msa0558010:CDS
TGGGCATCAGGGCTTCATAT+AGG 0.484484 4_1:-56597840 Msa0558010:CDS
ATCTAAGTACTTTGAAGGAA+AGG 0.486923 4_1:-56596763 Msa0558010:CDS
TCTAAGTACTTTGAAGGAAA+GGG 0.492540 4_1:-56596762 Msa0558010:CDS
GCCACAGTCTGCTCTGCCAC+GGG 0.492659 4_1:+56593529 None:intergenic
ACGCAGATATTGTAAGATAC+TGG 0.493946 4_1:+56596826 None:intergenic
AAAATACCCTCGCCAAAAGC+AGG 0.494149 4_1:+56594300 None:intergenic
GATAATGTCACACTAAGGTC+TGG 0.494415 4_1:-56597406 Msa0558010:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4_1:-56597235 Msa0558010:CDS
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4_1:-56597591 Msa0558010:CDS
TCTTCGAACGGTGCAAAGCT+CGG 0.496479 4_1:+56599002 None:intergenic
GGAGAATGCAGTTGCGCCAA+AGG 0.496923 4_1:-56593461 Msa0558010:three_prime_UTR
CGCTGATTGCCATCTCAAGA+TGG 0.497377 4_1:+56594527 None:intergenic
TTCAGTTTAGGTACTCTTGG+AGG 0.498097 4_1:-56597547 Msa0558010:CDS
TTCTCATTCACACACACCTC+TGG 0.499640 4_1:-56593929 Msa0558010:intron
TTTGCAGGGTGAAAAGATCA+AGG 0.499744 4_1:-56593822 Msa0558010:intron
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4_1:+56595574 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4_1:+56599350 None:intergenic
CTATTGTAGAAACCACTGAA+TGG 0.501864 4_1:-56594670 Msa0558010:intron
ATGCGGTTCAACGCCGTCTA+CGG 0.502292 4_1:-56593778 Msa0558010:three_prime_UTR
GTTTGATAGTTTGAAACACT+TGG 0.502558 4_1:-56598956 Msa0558010:CDS
GATTTAACGGTAAATATTGA+GGG 0.503513 4_1:-56597475 Msa0558010:CDS
ATCAAGACCACCACTGTGCT+GGG 0.507288 4_1:-56593621 Msa0558010:three_prime_UTR
GATTGGTATCGGTGTGGCGG+AGG 0.508465 4_1:+56593641 None:intergenic
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4_1:+56595544 None:intergenic
CACCAAAGACAGGTACGATT+AGG 0.511658 4_1:+56593375 None:intergenic
TCTCTTTGTAATACATGGGA+TGG 0.512107 4_1:-56594485 Msa0558010:CDS
TATGCGGCATCCATTACTCC+TGG 0.512692 4_1:-56597452 Msa0558010:CDS
GTTCTGATCTGATGATCTCC+AGG 0.513777 4_1:+56597977 None:intergenic
GAACAAGGTGGAACTTATCA+TGG 0.516489 4_1:+56593674 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4_1:-56594659 Msa0558010:CDS
CTGTTAGCTTATTGCAATAG+GGG 0.520724 4_1:+56594332 None:intergenic
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4_1:+56595757 None:intergenic
AACCCTATAAGTTGGTTGCA+AGG 0.524314 4_1:+56596697 None:intergenic
AGGAGTGCTCCAATGAGCTC+AGG 0.524655 4_1:-56593747 Msa0558010:three_prime_UTR
AGGGTTCTCTGGGGATGTAT+CGG 0.524805 4_1:-56596680 Msa0558010:CDS
GCATCGTTTCACGTCTATCA+AGG 0.526470 4_1:+56595968 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4_1:-56595672 Msa0558010:CDS
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4_1:-56595545 Msa0558010:intron
TGTGGCTTCGGCGTGGCAGA+AGG 0.530744 4_1:-56593512 Msa0558010:three_prime_UTR
CGTGCAGGATGACGATTTAA+CGG 0.531863 4_1:-56597488 Msa0558010:CDS
TGCTAGAGCAAGTGAAGACC+TGG 0.532356 4_1:-56597995 Msa0558010:CDS
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4_1:+56597696 None:intergenic
GTGCTCCAATGAGCTCAGGC+CGG 0.534332 4_1:-56593743 Msa0558010:three_prime_UTR
AACCACTGAATGGAAAATCC+CGG 0.535658 4_1:-56594660 Msa0558010:CDS
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4_1:+56597935 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4_1:-56594489 Msa0558010:CDS
TCTTCAACGGTCTTGATGCC+CGG 0.538757 4_1:+56593724 None:intergenic
GACGGTGCCTACGTTGGCAA+CGG 0.539764 4_1:+56593588 None:intergenic
CAAACTATCAAACAATTCCC+TGG 0.540992 4_1:+56598966 None:intergenic
GTGTGGCGGAGGATCTCATC+GGG 0.543492 4_1:+56593652 None:intergenic
GATTTGGGCTATTAATAGGA+AGG 0.544697 4_1:+56593993 None:intergenic
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4_1:+56599343 None:intergenic
TAATTGACCATGCACAAAAG+TGG 0.545555 4_1:-56596607 Msa0558010:CDS
GGATTGGACTGAGTTGGACT+CGG 0.547239 4_1:+56599275 None:intergenic
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4_1:-56595712 Msa0558010:CDS
GCCAAAGGCCGCGTATTGCA+AGG 0.549811 4_1:-56593446 Msa0558010:three_prime_UTR
CCCCAGAGAACCCTATAAGT+TGG 0.550494 4_1:+56596689 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4_1:+56599313 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4_1:+56599098 None:intergenic
TTATTGCAATAGGGGAATGA+GGG 0.552632 4_1:+56594340 None:intergenic
GAAAGAGCCACGCCTTCTGA+AGG 0.552865 4_1:+56596851 None:intergenic
GCTTGCTTATTCTTTACAGG+AGG 0.553481 4_1:-56594274 Msa0558010:three_prime_UTR
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4_1:+56595721 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4_1:-56595653 Msa0558010:CDS
TTTACTACAACCTTCTGTTG+TGG 0.555632 4_1:+56599417 None:intergenic
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4_1:+56594642 None:intergenic
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4_1:+56599152 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4_1:+56597442 None:intergenic
ACTCTTGACAGTTTCTTCAA+CGG 0.558778 4_1:+56593711 None:intergenic
GTCTCCGATGTTCCATCGAG+TGG 0.560814 4_1:-56593482 Msa0558010:three_prime_UTR
AACCAGAACAGCAGCAAGAG+CGG 0.560885 4_1:-56596571 Msa0558010:CDS
AGGTGGAACTTATCATGGAC+AGG 0.561018 4_1:+56593679 None:intergenic
CTCCTTGGCGTATCCGTAGA+CGG 0.561808 4_1:+56593765 None:intergenic
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4_1:+56599363 None:intergenic
TCTGCGTGAACATGTTAACT+TGG 0.562499 4_1:-56596810 Msa0558010:CDS
AAGAACACTCGCTGCTGCCA+GGG 0.563118 4_1:-56598983 Msa0558010:CDS
GCAATAAGCTAACAGCAGCT+TGG 0.564108 4_1:-56594324 Msa0558010:three_prime_UTR
TATAGGTATTTGCTTCCAGA+AGG 0.564358 4_1:-56597823 Msa0558010:CDS
GATTATTGGTGCCGCAGAGA+AGG 0.567110 4_1:-56593407 Msa0558010:three_prime_UTR
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4_1:+56599153 None:intergenic
CTCTTTGTAATACATGGGAT+GGG 0.569356 4_1:-56594484 Msa0558010:CDS
TTACTCCAAGTGCGAGCCCG+TGG 0.570477 4_1:-56593545 Msa0558010:three_prime_UTR
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4_1:-56597527 Msa0558010:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4_1:-56597208 Msa0558010:CDS
GGAGGATCTCATCGGGAACA+AGG 0.575130 4_1:+56593659 None:intergenic
TGCGGATATTGGAGATCACC+AGG 0.577563 4_1:-56597131 Msa0558010:intron
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4_1:-56599251 Msa0558010:CDS
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4_1:+56599107 None:intergenic
GTGGTGGTCTTGATTGGTAT+CGG 0.581002 4_1:+56593630 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4_1:+56595701 None:intergenic
AAGATTGTTTCATCATCCCC+AGG 0.584283 4_1:+56595655 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4_1:-56597236 Msa0558010:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4_1:-56595713 Msa0558010:CDS
TGAAACGATGCTTATGGCAA+AGG 0.587621 4_1:-56595956 Msa0558010:CDS
TGCCGCAGAGAAGGAACGTA+AGG 0.588757 4_1:-56593398 Msa0558010:three_prime_UTR
AACTGATCCTTCAGAAGGCG+TGG 0.588853 4_1:-56596858 Msa0558010:CDS
GAAACTGTCAAGAGTGTGGT+GGG 0.589252 4_1:-56593703 Msa0558010:three_prime_UTR
TATCAGTATGCACCAAAGAC+AGG 0.589742 4_1:+56593365 None:intergenic
TTAGAGATGAACAGCAGCAA+TGG 0.589819 4_1:-56594631 Msa0558010:CDS
TTTGTTGGATAAAATTCTTG+AGG 0.589996 4_1:-56597629 Msa0558010:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4_1:+56594641 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4_1:+56599269 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4_1:-56595553 Msa0558010:CDS
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4_1:+56599104 None:intergenic
TTTCAGATAATGTCACACTA+AGG 0.593354 4_1:-56597411 Msa0558010:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4_1:+56595543 None:intergenic
TTCTCCACTCGATGGAACAT+CGG 0.594689 4_1:+56593478 None:intergenic
TAGAATGTGCGTGGGCATCA+GGG 0.594705 4_1:-56597851 Msa0558010:CDS
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4_1:+56599194 None:intergenic
AATGCGATCAGCGCCACTGA+TGG 0.596091 4_1:+56595756 None:intergenic
CCGTCTCTGAAATGGTGGTG+AGG 0.596178 4_1:-56593570 Msa0558010:three_prime_UTR
GGGTAATGGAAATGGAACAA+TGG 0.596428 4_1:-56597368 Msa0558010:CDS
TTCAGAGACGGTGCCTACGT+TGG 0.598137 4_1:+56593582 None:intergenic
GCGTCGATCTAGAATGTGCG+TGG 0.598379 4_1:-56597860 Msa0558010:CDS
GGCCTTACGTTCCTTCTCTG+CGG 0.599906 4_1:+56593396 None:intergenic
AATTGACCATGCACAAAAGT+GGG 0.600519 4_1:-56596606 Msa0558010:CDS
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4_1:-56597719 Msa0558010:CDS
GCTGTTGGTTCTCCCATCAG+TGG 0.602482 4_1:-56595769 Msa0558010:CDS
GAAGGGTGAAGCTAATGAGT+AGG 0.602642 4_1:+56594011 None:intergenic
ATCTCAGGACCTAATACTGG+AGG 0.603222 4_1:-56597262 Msa0558010:CDS
AAAACCCAATCCACAACAGA+AGG 0.603222 4_1:-56599427 Msa0558010:five_prime_UTR
CAACTGCATTCTCCACTCGA+TGG 0.604282 4_1:+56593470 None:intergenic
GCATACTGATAGGATAGCTA+AGG 0.606425 4_1:-56593353 Msa0558010:three_prime_UTR
GTACTTCTCCTTGCAATACG+CGG 0.606836 4_1:+56593438 None:intergenic
ATTTGGGCTATTAATAGGAA+GGG 0.608624 4_1:+56593994 None:intergenic
CTTGATTGGTATCGGTGTGG+CGG 0.609440 4_1:+56593638 None:intergenic
AGCTGCGATCCATCTTGAGA+TGG 0.610710 4_1:-56594536 Msa0558010:CDS
CTGTATCTAATCATTCACAC+AGG 0.610846 4_1:-56598930 Msa0558010:intron
GGGAATAGTCAACAATCTAC+CGG 0.610891 4_1:+56599023 None:intergenic
AGCAATAGATTTGAACAACA+TGG 0.612310 4_1:-56597746 Msa0558010:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4_1:-56595703 Msa0558010:CDS
AGCAGACTGTGGCTTCGGCG+TGG 0.612873 4_1:-56593519 Msa0558010:three_prime_UTR
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4_1:+56599294 None:intergenic
AAAGCTCATACTCCTGCTGT+TGG 0.614300 4_1:-56595784 Msa0558010:CDS
AGCAGCGAGTGTTCTTCGAA+CGG 0.614458 4_1:+56598990 None:intergenic
GTTTCTAAAAGCGCGTCACA+AGG 0.615569 4_1:-56597346 Msa0558010:CDS
GGATCTACGAGGTATGCGAC+TGG 0.616506 4_1:-56594563 Msa0558010:CDS
AGACGGCGTTGAACCGCATG+AGG 0.616715 4_1:+56593782 None:intergenic
AGGGCTCCCGTTGCCAACGT+AGG 0.619019 4_1:-56593595 Msa0558010:three_prime_UTR
CGCCGTCTACGGATACGCCA+AGG 0.620888 4_1:-56593767 Msa0558010:three_prime_UTR
AATTAGATCTGGAACTAGAG+TGG 0.621351 4_1:-56597290 Msa0558010:CDS
AACAACGCCCGTTTACCCGT+CGG 0.621448 4_1:-56599168 Msa0558010:CDS
CGGTAAATATTGAGGGTATG+CGG 0.621592 4_1:-56597468 Msa0558010:CDS
CTGATGGGAGAACCAACAGC+AGG 0.622975 4_1:+56595772 None:intergenic
CCCATTCATCCATTGAGCAT+AGG 0.623957 4_1:+56597582 None:intergenic
GGTGTGGCGGAGGATCTCAT+CGG 0.625467 4_1:+56593651 None:intergenic
AGTGGAACTGATCCTTCAGA+AGG 0.626344 4_1:-56596863 Msa0558010:CDS
TTGGTTTGACCTTATCCTTG+CGG 0.628002 4_1:-56597149 Msa0558010:CDS
GCCCGTGGCAGAGCAGACTG+TGG 0.630848 4_1:-56593530 Msa0558010:three_prime_UTR
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4_1:+56599312 None:intergenic
GAAAAGTCGAGTTGTTGTTG+AGG 0.632731 4_1:+56599087 None:intergenic
CAATCTACCGGAAACAGCAA+CGG 0.634527 4_1:+56599035 None:intergenic
CCTCACCACCATTTCAGAGA+CGG 0.646173 4_1:+56593570 None:intergenic
TTCCAGTGAAAATTCCATTG+CGG 0.649211 4_1:+56596721 None:intergenic
ACAAGTAATACTTCCTCATG+CGG 0.649841 4_1:-56593795 Msa0558010:three_prime_UTR
CGTCGATCTAGAATGTGCGT+GGG 0.653354 4_1:-56597859 Msa0558010:CDS
TGACCATGCACAAAAGTGGG+TGG 0.654188 4_1:-56596603 Msa0558010:CDS
GAACAGCAGCAAGAGCGGAG+AGG 0.655853 4_1:-56596566 Msa0558010:CDS
AGGCACCGTCTCTGAAATGG+TGG 0.655901 4_1:-56593575 Msa0558010:three_prime_UTR
GCAAACATCTAAGAATACTG+TGG 0.660918 4_1:-56594584 Msa0558010:CDS
GCTCTATCAGTCATTACAGG+AGG 0.665919 4_1:-56596540 Msa0558010:CDS
TCTCAGGACCTAATACTGGA+GGG 0.667789 4_1:-56597261 Msa0558010:CDS
GGTGATCTCCAATATCCGCA+AGG 0.671731 4_1:+56597134 None:intergenic
TAGATCTGGAACTAGAGTGG+TGG 0.673809 4_1:-56597287 Msa0558010:CDS
GCAGGTGAGTTGCATCGGTG+TGG 0.676745 4_1:+56599368 None:intergenic
ACTTAGATCAGCATAATGAG+TGG 0.681388 4_1:+56596778 None:intergenic
CTATGCTCAATGGATGAATG+GGG 0.683732 4_1:-56597581 Msa0558010:CDS
AAACTGTCAAGAGTGTGGTG+GGG 0.686267 4_1:-56593702 Msa0558010:three_prime_UTR
GAGCCCTGTGCCCAGCACAG+TGG 0.686300 4_1:+56593611 None:intergenic
GGTCTTGATTGGTATCGGTG+TGG 0.686331 4_1:+56593635 None:intergenic
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4_1:-56595671 Msa0558010:CDS
TGATATTTATTATGGTCCAG+CGG 0.693969 4_1:-56594608 Msa0558010:CDS
AGAAACTGTCAAGAGTGTGG+TGG 0.697460 4_1:-56593704 Msa0558010:three_prime_UTR
AATTGTGAACGTGTACTCTG+AGG 0.698166 4_1:-56596465 Msa0558010:intron
AATACATGGGATGGGCACTG+GGG 0.701367 4_1:-56594476 Msa0558010:CDS
GGATCTCATCGGGAACAAGG+TGG 0.702623 4_1:+56593662 None:intergenic
TGAAGAGGACAATGACATTG+CGG 0.707528 4_1:-56597512 Msa0558010:CDS
TGAAGAAACTGTCAAGAGTG+TGG 0.713225 4_1:-56593707 Msa0558010:three_prime_UTR
CCCAGGCAATTCTACCACTG+TGG 0.714085 4_1:+56595672 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4_1:-56595686 Msa0558010:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.728909 4_1:+56597151 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4_1:-56594658 Msa0558010:CDS
AAGAATACTGTGGATCTACG+AGG 0.748281 4_1:-56594574 Msa0558010:CDS
GGTTCAAAATGAGTGACACG+AGG 0.753470 4_1:+56594415 None:intergenic
CCAACTTATAGGGTTCTCTG+GGG 0.797932 4_1:-56596689 Msa0558010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATAAAAGAAGTTAT+TGG - chr4_1:56597396-56597415 Msa0558010:CDS 10.0%
!!! AATTTAGAATTGATATATTT+TGG - chr4_1:56597496-56597515 Msa0558010:CDS 10.0%
!!! TTTTATTTATTTATGAACAA+AGG + chr4_1:56599417-56599436 None:intergenic 10.0%
!!! GTCAATTATATTTTTATCAA+AGG + chr4_1:56596019-56596038 None:intergenic 15.0%
!!! ATTTCAGATAAACTTTAAAA+GGG + chr4_1:56596288-56596307 None:intergenic 15.0%
!! AATTTCAGATAAACTTTAAA+AGG + chr4_1:56596289-56596308 None:intergenic 15.0%
!! AAATACCTTTCAATAAAATT+TGG + chr4_1:56597432-56597451 None:intergenic 15.0%
!!! AAGGTATTTTATATTTAATC+TGG - chr4_1:56597443-56597462 Msa0558010:CDS 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG - chr4_1:56597613-56597632 Msa0558010:CDS 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG + chr4_1:56597831-56597850 None:intergenic 15.0%
!! AAAGAATGTTCAAAAAATAA+AGG + chr4_1:56599354-56599373 None:intergenic 15.0%
!!! TTTTACTTTGGATTTGTAAA+AGG + chr4_1:56594482-56594501 None:intergenic 20.0%
!!! ATTTTTGTGAACTTTTACTT+TGG + chr4_1:56594494-56594513 None:intergenic 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG - chr4_1:56594569-56594588 Msa0558010:CDS 20.0%
!!! TTCAAATCTATTGCTTTTTT+CGG + chr4_1:56594887-56594906 None:intergenic 20.0%
!! ATCAGAGATAAAATATTTGT+TGG - chr4_1:56594994-56595013 Msa0558010:intron 20.0%
!! ATAATGATTGTCATACTATA+TGG + chr4_1:56596262-56596281 None:intergenic 20.0%
!! ATATTTAAATTAACAGCTCT+TGG + chr4_1:56596439-56596458 None:intergenic 20.0%
!! CTTTAATTATTGAATTGAGT+TGG + chr4_1:56596805-56596824 None:intergenic 20.0%
!!! ATTATCTAAAATATTCTTCG+TGG - chr4_1:56597362-56597381 Msa0558010:CDS 20.0%
!!! GAAATCCAAATTTTATTGAA+AGG - chr4_1:56597424-56597443 Msa0558010:CDS 20.0%
!!! CATTTTTTCTTTTGAAGTAA+TGG - chr4_1:56597466-56597485 Msa0558010:CDS 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG - chr4_1:56597612-56597631 Msa0558010:CDS 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG - chr4_1:56597614-56597633 Msa0558010:CDS 20.0%
!!! TTAAGAAGCCAATTTTAAAA+AGG + chr4_1:56597808-56597827 None:intergenic 20.0%
!!! AAAAAGTATCAACAAAACAA+AGG + chr4_1:56598532-56598551 None:intergenic 20.0%
!!! TGTTTTGTTGATACTTTTTA+TGG - chr4_1:56598533-56598552 Msa0558010:intron 20.0%
!!! ATTTTTAGAAGAGTAATAGT+GGG + chr4_1:56598676-56598695 None:intergenic 20.0%
!!! TATTTTTAGAAGAGTAATAG+TGG + chr4_1:56598677-56598696 None:intergenic 20.0%
!! TCAATAGTTTAAGACATGTT+TGG - chr4_1:56593758-56593777 Msa0558010:three_prime_UTR 25.0%
! AAATCAAAGGAAACAGTTTA+TGG - chr4_1:56593928-56593947 Msa0558010:intron 25.0%
! AATCAAAGGAAACAGTTTAT+GGG - chr4_1:56593929-56593948 Msa0558010:intron 25.0%
! TTTCAGACATTTCTAATTGA+TGG - chr4_1:56594043-56594062 Msa0558010:three_prime_UTR 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG - chr4_1:56594361-56594380 Msa0558010:exon 25.0%
!! TGATGCAATTGTTTTCAATT+AGG - chr4_1:56594522-56594541 Msa0558010:CDS 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG + chr4_1:56594555-56594574 None:intergenic 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG + chr4_1:56594556-56594575 None:intergenic 25.0%
! GCAAAATTGTAATTTCCTAA+TGG - chr4_1:56594568-56594587 Msa0558010:CDS 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG - chr4_1:56594723-56594742 Msa0558010:intron 25.0%
! TTTGTTGGATAAAATTCTTG+AGG - chr4_1:56595009-56595028 Msa0558010:intron 25.0%
! GATTTAACGGTAAATATTGA+GGG - chr4_1:56595163-56595182 Msa0558010:intron 25.0%
! AAAAAAGTTCAGATATTACC+TGG + chr4_1:56595528-56595547 None:intergenic 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG - chr4_1:56595680-56595699 Msa0558010:CDS 25.0%
!! TAACGGCATTATGAAAATTT+TGG + chr4_1:56596478-56596497 None:intergenic 25.0%
! GAAAAGCAACTAAAAGATTT+GGG - chr4_1:56596773-56596792 Msa0558010:CDS 25.0%
! TTAATATAGTTAACCTGTCA+AGG - chr4_1:56597161-56597180 Msa0558010:CDS 25.0%
! ATCCAAAAAACTCTATGTTT+GGG + chr4_1:56597525-56597544 None:intergenic 25.0%
! TATCCAAAAAACTCTATGTT+TGG + chr4_1:56597526-56597545 None:intergenic 25.0%
!! TTTTTGGATATATCCAATAG+CGG - chr4_1:56597536-56597555 Msa0558010:CDS 25.0%
! AAATAGTAACAAATACTCTC+CGG + chr4_1:56597602-56597621 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG - chr4_1:56597658-56597677 Msa0558010:CDS 25.0%
! GGTATTTATTACAGAAAAAC+AGG + chr4_1:56597693-56597712 None:intergenic 25.0%
! CAATTTCCAAATATGATGTT+AGG + chr4_1:56597721-56597740 None:intergenic 25.0%
! CTAACATCATATTTGGAAAT+TGG - chr4_1:56597719-56597738 Msa0558010:CDS 25.0%
! TTCAGATCATCCTATAATAT+AGG - chr4_1:56597745-56597764 Msa0558010:CDS 25.0%
! ATTCAATGTGCCTATATTAT+AGG + chr4_1:56597758-56597777 None:intergenic 25.0%
!!! ATCTGTCTCCTTTTTAAAAT+TGG - chr4_1:56597797-56597816 Msa0558010:CDS 25.0%
! AGCAATGGTGATATTTATTA+TGG - chr4_1:56598022-56598041 Msa0558010:CDS 25.0%
! ATTACAAAGAGAACTGAATA+TGG + chr4_1:56598145-56598164 None:intergenic 25.0%
!! ACACTTGTTGGTATAATTAA+AGG - chr4_1:56598435-56598454 Msa0558010:intron 25.0%
! GTATATATAAATGAGGAAAG+AGG + chr4_1:56598747-56598766 None:intergenic 25.0%
! TGAATGGGTATATATAAATG+AGG + chr4_1:56598754-56598773 None:intergenic 25.0%
! ATATACCCATTCAATTTCTT+TGG - chr4_1:56598761-56598780 Msa0558010:intron 25.0%
! GTTTGATAGTTTGAAACACT+TGG - chr4_1:56593682-56593701 Msa0558010:three_prime_UTR 30.0%
ACTTATTTGAGCTAATCTAC+CGG + chr4_1:56594072-56594091 None:intergenic 30.0%
ACTATTACTTAGCGTATGTT+TGG + chr4_1:56594099-56594118 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG + chr4_1:56594163-56594182 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG - chr4_1:56594166-56594185 Msa0558010:three_prime_UTR 30.0%
! ATCAACGTTTTTGATGTCTA+TGG - chr4_1:56594231-56594250 Msa0558010:three_prime_UTR 30.0%
! TCAACGTTTTTGATGTCTAT+GGG - chr4_1:56594232-56594251 Msa0558010:three_prime_UTR 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG + chr4_1:56594414-56594433 None:intergenic 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG + chr4_1:56594415-56594434 None:intergenic 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG + chr4_1:56594554-56594573 None:intergenic 30.0%
! TTGCATAGATTGCAATCTTT+TGG - chr4_1:56594613-56594632 Msa0558010:CDS 30.0%
AAAAAGGAACATAGAAATCC+TGG - chr4_1:56594685-56594704 Msa0558010:intron 30.0%
! AGTATCGTCTCAAATTTTTC+GGG - chr4_1:56594724-56594743 Msa0558010:intron 30.0%
AGCAATAGATTTGAACAACA+TGG - chr4_1:56594892-56594911 Msa0558010:intron 30.0%
ATTTGAACAACATGGAAGTT+AGG - chr4_1:56594900-56594919 Msa0558010:intron 30.0%
! GTATGTCCAATTTTCAGTTT+AGG - chr4_1:56595079-56595098 Msa0558010:intron 30.0%
! AGAGTACCTAAACTGAAAAT+TGG + chr4_1:56595088-56595107 None:intergenic 30.0%
! ATTTTCAGTTTAGGTACTCT+TGG - chr4_1:56595088-56595107 Msa0558010:intron 30.0%
CGATTTAACGGTAAATATTG+AGG - chr4_1:56595162-56595181 Msa0558010:intron 30.0%
TTTCAGATAATGTCACACTA+AGG - chr4_1:56595227-56595246 Msa0558010:intron 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG + chr4_1:56595337-56595356 None:intergenic 30.0%
! GTTGACTTCAAAATTAGATC+TGG - chr4_1:56595337-56595356 Msa0558010:intron 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG + chr4_1:56595674-56595693 None:intergenic 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG + chr4_1:56595675-56595694 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG - chr4_1:56595679-56595698 Msa0558010:CDS 30.0%
CTTGTTCTCATTGATGAAAT+TGG - chr4_1:56595751-56595770 Msa0558010:CDS 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG - chr4_1:56595875-56595894 Msa0558010:CDS 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG - chr4_1:56595876-56595895 Msa0558010:CDS 30.0%
CATTACAGGAGGAAAAAAAT+CGG - chr4_1:56596109-56596128 Msa0558010:intron 30.0%
! CTTTATTAGTTTCTTCTCCT+TGG - chr4_1:56596235-56596254 Msa0558010:intron 30.0%
ATTGATAGATATCCAATCCT+CGG - chr4_1:56596407-56596426 Msa0558010:intron 30.0%
! ATGAAAATTTTGGATGGAAG+AGG + chr4_1:56596468-56596487 None:intergenic 30.0%
! GGCATTATGAAAATTTTGGA+TGG + chr4_1:56596474-56596493 None:intergenic 30.0%
! TTTCATAATGCCGTTATTTC+TGG - chr4_1:56596482-56596501 Msa0558010:CDS 30.0%
!! TTCATAATGCCGTTATTTCT+GGG - chr4_1:56596483-56596502 Msa0558010:CDS 30.0%
GATCTTTGCAAAAGAAGAAA+AGG + chr4_1:56596633-56596652 None:intergenic 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG - chr4_1:56596637-56596656 Msa0558010:CDS 30.0%
CGAAAAGCAACTAAAAGATT+TGG - chr4_1:56596772-56596791 Msa0558010:CDS 30.0%
ACATCATATACTCCACAATT+TGG - chr4_1:56596905-56596924 Msa0558010:CDS 30.0%
AGTAATCTTATCTAGTGAGT+TGG - chr4_1:56597233-56597252 Msa0558010:CDS 30.0%
GTAATCTTATCTAGTGAGTT+GGG - chr4_1:56597234-56597253 Msa0558010:CDS 30.0%
TCCAAAAAACTCTATGTTTG+GGG + chr4_1:56597524-56597543 None:intergenic 30.0%
AATTACATGATAGAACAACG+AGG + chr4_1:56597657-56597676 None:intergenic 30.0%
CGTTGTTCTATCATGTAATT+TGG - chr4_1:56597657-56597676 Msa0558010:CDS 30.0%
TGATATTTATTATGGTCCAG+CGG - chr4_1:56598030-56598049 Msa0558010:CDS 30.0%
TCAGTTCTCTTTGTAATACA+TGG - chr4_1:56598148-56598167 Msa0558010:intron 30.0%
CAGTTCTCTTTGTAATACAT+GGG - chr4_1:56598149-56598168 Msa0558010:intron 30.0%
ACAGTACATCCATAATTCAT+TGG + chr4_1:56598256-56598275 None:intergenic 30.0%
! ATCAATCGAGTGACTAATTT+TGG - chr4_1:56598387-56598406 Msa0558010:intron 30.0%
!!! ATTTGCCAAACTTTTAGCTT+AGG - chr4_1:56598570-56598589 Msa0558010:intron 30.0%
!!! TTTGCCAAACTTTTAGCTTA+GGG - chr4_1:56598571-56598590 Msa0558010:intron 30.0%
TAATGAGTAGGCAAAAACAA+CGG + chr4_1:56598618-56598637 None:intergenic 30.0%
ATTTGGGCTATTAATAGGAA+GGG + chr4_1:56598647-56598666 None:intergenic 30.0%
!! ATCTGATTTGGGCTATTAAT+AGG + chr4_1:56598652-56598671 None:intergenic 30.0%
! TAATAGTGGGAATCTGATTT+GGG + chr4_1:56598663-56598682 None:intergenic 30.0%
AGAGACCAAAGAAATTGAAT+GGG + chr4_1:56598769-56598788 None:intergenic 30.0%
TAGAGACCAAAGAAATTGAA+TGG + chr4_1:56598770-56598789 None:intergenic 30.0%
!! ACTTTTCTTCTCATTTTTGC+AGG - chr4_1:56598801-56598820 Msa0558010:intron 30.0%
!! CTTTTCTTCTCATTTTTGCA+GGG - chr4_1:56598802-56598821 Msa0558010:intron 30.0%
!! AAGTACAATGCATCGATTAT+TGG - chr4_1:56599217-56599236 Msa0558010:CDS 30.0%
CTTTGCTAGTAATTAGTTAC+TGG - chr4_1:56599370-56599389 Msa0558010:exon 30.0%
TTTACTACAACCTTCTGTTG+TGG + chr4_1:56593224-56593243 None:intergenic 35.0%
CAAACTATCAAACAATTCCC+TGG + chr4_1:56593675-56593694 None:intergenic 35.0%
CTGTATCTAATCATTCACAC+AGG - chr4_1:56593708-56593727 Msa0558010:three_prime_UTR 35.0%
! GAAAGTGATGGAAACTGATT+GGG + chr4_1:56593990-56594009 None:intergenic 35.0%
! TGAAAGTGATGGAAACTGAT+TGG + chr4_1:56593991-56594010 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr4_1:56594024-56594043 None:intergenic 35.0%
! CATTTCTAATTGATGGCTAC+CGG - chr4_1:56594050-56594069 Msa0558010:three_prime_UTR 35.0%
! AGCAGCTTCTTTTATGCATT+TGG - chr4_1:56594328-56594347 Msa0558010:three_prime_UTR 35.0%
! GCAGCTTCTTTTATGCATTT+GGG - chr4_1:56594329-56594348 Msa0558010:three_prime_UTR 35.0%
! TTCTTTTATGCATTTGGGCT+AGG - chr4_1:56594334-56594353 Msa0558010:three_prime_UTR 35.0%
CATAATGTCATGTCCCAATA+AGG - chr4_1:56594398-56594417 Msa0558010:CDS 35.0%
! TCTAATTGCACTTGTGCTTT+TGG - chr4_1:56594444-56594463 Msa0558010:CDS 35.0%
! CTAATTGCACTTGTGCTTTT+GGG - chr4_1:56594445-56594464 Msa0558010:CDS 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG - chr4_1:56594574-56594593 Msa0558010:CDS 35.0%
TCATCAGATCAGAACGAAAA+AGG - chr4_1:56594669-56594688 Msa0558010:intron 35.0%
AATCCTGGACTCTTTATTGA+AGG - chr4_1:56594700-56594719 Msa0558010:intron 35.0%
GATCGACGCTTAGTAATAAA+TGG + chr4_1:56594767-56594786 None:intergenic 35.0%
TATAGGTATTTGCTTCCAGA+AGG - chr4_1:56594815-56594834 Msa0558010:intron 35.0%
ACTCAAAATTGCTCTTTCCT+CGG + chr4_1:56594945-56594964 None:intergenic 35.0%
TCTGGAAATTCTTCTGAGTT+GGG - chr4_1:56595250-56595269 Msa0558010:intron 35.0%
! AATTCTTCTGAGTTGGGTAA+TGG - chr4_1:56595256-56595275 Msa0558010:intron 35.0%
! AATTAGATCTGGAACTAGAG+TGG - chr4_1:56595348-56595367 Msa0558010:intron 35.0%
AACTGCTTCAATGAAAACGT+TGG - chr4_1:56595402-56595421 Msa0558010:intron 35.0%
ACTGCTTCAATGAAAACGTT+GGG - chr4_1:56595403-56595422 Msa0558010:intron 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG + chr4_1:56595470-56595489 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG - chr4_1:56595470-56595489 Msa0558010:intron 35.0%
AGGCAACTTCCAAAAACTTA+CGG + chr4_1:56595720-56595739 None:intergenic 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG + chr4_1:56595740-56595759 None:intergenic 35.0%
CTCATTGATGAAATTGGTAG+TGG - chr4_1:56595757-56595776 Msa0558010:CDS 35.0%
ACGCAGATATTGTAAGATAC+TGG + chr4_1:56595815-56595834 None:intergenic 35.0%
ACTTAGATCAGCATAATGAG+TGG + chr4_1:56595863-56595882 None:intergenic 35.0%
TGCTGATCTAAGTACTTTGA+AGG - chr4_1:56595870-56595889 Msa0558010:CDS 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG - chr4_1:56595903-56595922 Msa0558010:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG + chr4_1:56595920-56595939 None:intergenic 35.0%
AAACCTTGCAACCAACTTAT+AGG - chr4_1:56595938-56595957 Msa0558010:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG - chr4_1:56595939-56595958 Msa0558010:CDS 35.0%
TAATTGACCATGCACAAAAG+TGG - chr4_1:56596031-56596050 Msa0558010:intron 35.0%
AATTGACCATGCACAAAAGT+GGG - chr4_1:56596032-56596051 Msa0558010:intron 35.0%
AATGCTCTATCAGTCATTAC+AGG - chr4_1:56596095-56596114 Msa0558010:intron 35.0%
GGAGGAAAAAAATCGGTTAA+AGG - chr4_1:56596116-56596135 Msa0558010:intron 35.0%
GTTCACAATTTCTGCATGAA+TGG + chr4_1:56596163-56596182 None:intergenic 35.0%
TTGTCATACTATATGGACCA+AGG + chr4_1:56596255-56596274 None:intergenic 35.0%
ACCAGAAAATCAAAGTGTGA+TGG - chr4_1:56596342-56596361 Msa0558010:intron 35.0%
!! TCCATCACACTTTGATTTTC+TGG + chr4_1:56596346-56596365 None:intergenic 35.0%
GGATTGGATATCTATCAATG+AGG + chr4_1:56596406-56596425 None:intergenic 35.0%
TTGATAGATATCCAATCCTC+GGG - chr4_1:56596408-56596427 Msa0558010:intron 35.0%
!! TCATAATGCCGTTATTTCTG+GGG - chr4_1:56596484-56596503 Msa0558010:CDS 35.0%
! ACCATTTTCCCCAGAAATAA+CGG + chr4_1:56596495-56596514 None:intergenic 35.0%
GAAGAAAAGGAAAAGAGTGA+GGG + chr4_1:56596620-56596639 None:intergenic 35.0%
AGAAGAAAAGGAAAAGAGTG+AGG + chr4_1:56596621-56596640 None:intergenic 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG - chr4_1:56596636-56596655 Msa0558010:CDS 35.0%
AGAGGATGCAAAATCTCAAA+TGG - chr4_1:56596730-56596749 Msa0558010:CDS 35.0%
! AGTATGAGCTTTTACAATGG+AGG + chr4_1:56596846-56596865 None:intergenic 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG + chr4_1:56596849-56596868 None:intergenic 35.0%
GAAACAATCTTGGTACAGTA+TGG - chr4_1:56596995-56597014 Msa0558010:intron 35.0%
GGAGTATGTAAATAGCTAGA+GGG - chr4_1:56597561-56597580 Msa0558010:CDS 35.0%
GAGTATGTAAATAGCTAGAG+GGG - chr4_1:56597562-56597581 Msa0558010:CDS 35.0%
CAAATATGATGTTAGGAAGC+TGG + chr4_1:56597714-56597733 None:intergenic 35.0%
CAGCTTCCTAACATCATATT+TGG - chr4_1:56597712-56597731 Msa0558010:CDS 35.0%
CTATTGTAGAAACCACTGAA+TGG - chr4_1:56597968-56597987 Msa0558010:CDS 35.0%
GCAAACATCTAAGAATACTG+TGG - chr4_1:56598054-56598073 Msa0558010:CDS 35.0%
TCTCTTTGTAATACATGGGA+TGG - chr4_1:56598153-56598172 Msa0558010:intron 35.0%
CTCTTTGTAATACATGGGAT+GGG - chr4_1:56598154-56598173 Msa0558010:intron 35.0%
CCATAATTCATTGGACTTTC+TGG + chr4_1:56598247-56598266 None:intergenic 35.0%
CCAGAAAGTCCAATGAATTA+TGG - chr4_1:56598244-56598263 Msa0558010:intron 35.0%
TTATTGCAATAGGGGAATGA+GGG + chr4_1:56598301-56598320 None:intergenic 35.0%
! CTGTTAGCTTATTGCAATAG+GGG + chr4_1:56598309-56598328 None:intergenic 35.0%
! GCTGTTAGCTTATTGCAATA+GGG + chr4_1:56598310-56598329 None:intergenic 35.0%
! TGCTGTTAGCTTATTGCAAT+AGG + chr4_1:56598311-56598330 None:intergenic 35.0%
TCTGCTTGCTTATTCTTTAC+AGG - chr4_1:56598361-56598380 Msa0558010:intron 35.0%
ACATACGTAAACACACTTGT+TGG - chr4_1:56598423-56598442 Msa0558010:intron 35.0%
ATCTCCCTAAGCTAAAAGTT+TGG + chr4_1:56598578-56598597 None:intergenic 35.0%
GGAGATCATAACAGAGAATA+GGG - chr4_1:56598592-56598611 Msa0558010:intron 35.0%
GATTTGGGCTATTAATAGGA+AGG + chr4_1:56598648-56598667 None:intergenic 35.0%
! GTAATAGTGGGAATCTGATT+TGG + chr4_1:56598664-56598683 None:intergenic 35.0%
ACAAGTAATACTTCCTCATG+CGG - chr4_1:56598843-56598862 Msa0558010:intron 35.0%
ACTCTTGACAGTTTCTTCAA+CGG + chr4_1:56598930-56598949 None:intergenic 35.0%
AAAACCCAATCCACAACAGA+AGG - chr4_1:56593211-56593230 Msa0558010:three_prime_UTR 40.0%
ACAACCTTCTGTTGTGGATT+GGG + chr4_1:56593218-56593237 None:intergenic 40.0%
TACAACCTTCTGTTGTGGAT+TGG + chr4_1:56593219-56593238 None:intergenic 40.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG + chr4_1:56593387-56593406 None:intergenic 40.0%
ATAGCCTCAAAACTCTCGAA+TGG - chr4_1:56593387-56593406 Msa0558010:three_prime_UTR 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG + chr4_1:56593394-56593413 None:intergenic 40.0%
TGCAGAAAGTTGCTTGCATA+TGG + chr4_1:56593417-56593436 None:intergenic 40.0%
TGCATTCACTTCCACTTCAA+TGG - chr4_1:56593433-56593452 Msa0558010:three_prime_UTR 40.0%
GCATTCACTTCCACTTCAAT+GGG - chr4_1:56593434-56593453 Msa0558010:three_prime_UTR 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG + chr4_1:56593514-56593533 None:intergenic 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG + chr4_1:56593543-56593562 None:intergenic 40.0%
! GAAAAGTCGAGTTGTTGTTG+AGG + chr4_1:56593554-56593573 None:intergenic 40.0%
! CAACAACAACTCGACTTTTC+TGG - chr4_1:56593554-56593573 Msa0558010:three_prime_UTR 40.0%
GGGAATAGTCAACAATCTAC+CGG + chr4_1:56593618-56593637 None:intergenic 40.0%
CATTCACACAGGTTTGAACT+TGG - chr4_1:56593719-56593738 Msa0558010:three_prime_UTR 40.0%
TTGATTTCCATCATCTCTCG+AGG + chr4_1:56593915-56593934 None:intergenic 40.0%
!! CGAGAGATGATGGAAATCAA+AGG - chr4_1:56593915-56593934 Msa0558010:intron 40.0%
GGGCAATCTAATGAAAGTGA+TGG + chr4_1:56594002-56594021 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr4_1:56594023-56594042 None:intergenic 40.0%
GCAATCAAGGAATCATGCAT+TGG + chr4_1:56594150-56594169 None:intergenic 40.0%
! GTTGATGTCGTTTAGAACCT+TGG + chr4_1:56594217-56594236 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG + chr4_1:56594706-56594725 None:intergenic 40.0%
GCATTCAGAACTATACCTTC+TGG + chr4_1:56594833-56594852 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG - chr4_1:56594859-56594878 Msa0558010:intron 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG - chr4_1:56594919-56594938 Msa0558010:intron 40.0%
CCTATGCTCAATGGATGAAT+GGG - chr4_1:56595056-56595075 Msa0558010:intron 40.0%
CTATGCTCAATGGATGAATG+GGG - chr4_1:56595057-56595076 Msa0558010:intron 40.0%
TTCAGTTTAGGTACTCTTGG+AGG - chr4_1:56595091-56595110 Msa0558010:intron 40.0%
AGGTTGCAATTCTGTTGAAG+AGG - chr4_1:56595111-56595130 Msa0558010:intron 40.0%
TGAAGAGGACAATGACATTG+CGG - chr4_1:56595126-56595145 Msa0558010:intron 40.0%
! CGGTAAATATTGAGGGTATG+CGG - chr4_1:56595170-56595189 Msa0558010:intron 40.0%
GATAATGTCACACTAAGGTC+TGG - chr4_1:56595232-56595251 Msa0558010:intron 40.0%
GTCTGGAAATTCTTCTGAGT+TGG - chr4_1:56595249-56595268 Msa0558010:intron 40.0%
!! TCTGAGTTGGGTAATGGAAA+TGG - chr4_1:56595262-56595281 Msa0558010:intron 40.0%
!! GGGTAATGGAAATGGAACAA+TGG - chr4_1:56595270-56595289 Msa0558010:intron 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG + chr4_1:56595330-56595349 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG + chr4_1:56595331-56595350 None:intergenic 40.0%
! CTTTTGACATAAGTGATGCC+AGG + chr4_1:56595429-56595448 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG - chr4_1:56595430-56595449 Msa0558010:intron 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG + chr4_1:56595466-56595485 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG + chr4_1:56595481-56595500 None:intergenic 40.0%
! TTGGTTTGACCTTATCCTTG+CGG - chr4_1:56595489-56595508 Msa0558010:intron 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG + chr4_1:56595656-56595675 None:intergenic 40.0%
! CAAGGGACTGCAATTTTGAA+GGG + chr4_1:56595657-56595676 None:intergenic 40.0%
! TCAAGGGACTGCAATTTTGA+AGG + chr4_1:56595658-56595677 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG - chr4_1:56595708-56595727 Msa0558010:CDS 40.0%
TCTGCGTGAACATGTTAACT+TGG - chr4_1:56595828-56595847 Msa0558010:CDS 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG + chr4_1:56595944-56595963 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG - chr4_1:56595947-56595966 Msa0558010:CDS 40.0%
ACCAACTTATAGGGTTCTCT+GGG - chr4_1:56595948-56595967 Msa0558010:CDS 40.0%
AATTGTGAACGTGTACTCTG+AGG - chr4_1:56596173-56596192 Msa0558010:intron 40.0%
!! AAGTGTGATGGATGTTGTGA+AGG - chr4_1:56596354-56596373 Msa0558010:intron 40.0%
GGATATCTATCAATGAGGCA+CGG + chr4_1:56596401-56596420 None:intergenic 40.0%
TGATAGATATCCAATCCTCG+GGG - chr4_1:56596409-56596428 Msa0558010:intron 40.0%
GACATTCAATTACAGACTGC+AGG + chr4_1:56596544-56596563 None:intergenic 40.0%
CTCATTGCTTTGCACTTTCT+TGG - chr4_1:56596580-56596599 Msa0558010:CDS 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG - chr4_1:56596640-56596659 Msa0558010:CDS 40.0%
TAGACGTGAAACGATGCTTA+TGG - chr4_1:56596676-56596695 Msa0558010:CDS 40.0%
TGAAACGATGCTTATGGCAA+AGG - chr4_1:56596682-56596701 Msa0558010:CDS 40.0%
TTGCATCCTCTAACTCTTGT+TGG + chr4_1:56596721-56596740 None:intergenic 40.0%
AAGATTGTTTCATCATCCCC+AGG + chr4_1:56596986-56597005 None:intergenic 40.0%
TGGGGATGATGAAACAATCT+TGG - chr4_1:56596985-56597004 Msa0558010:intron 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG + chr4_1:56597177-56597196 None:intergenic 40.0%
TGTCAAGGAAGAAAACAGAG+TGG - chr4_1:56597176-56597195 Msa0558010:CDS 40.0%
! CTTATCTAGTGAGTTGGGAA+CGG - chr4_1:56597239-56597258 Msa0558010:CDS 40.0%
TTGGGATAAGACAGTTAGAG+CGG - chr4_1:56597262-56597281 Msa0558010:CDS 40.0%
!!! GCCCCAAACATAGAGTTTTT+TGG - chr4_1:56597520-56597539 Msa0558010:CDS 40.0%
TTGGATATATCCAATAGCGG+AGG - chr4_1:56597539-56597558 Msa0558010:CDS 40.0%
! TGGATATATCCAATAGCGGA+GGG - chr4_1:56597540-56597559 Msa0558010:CDS 40.0%
! GGGAGTATGTAAATAGCTAG+AGG - chr4_1:56597560-56597579 Msa0558010:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG - chr4_1:56597621-56597640 Msa0558010:CDS 40.0%
ACATTCAAGACCCAACAGAT+TGG + chr4_1:56597862-56597881 None:intergenic 40.0%
TCTGTACACTAACGCTTTGA+AGG - chr4_1:56597893-56597912 Msa0558010:CDS 40.0%
AACCACTGAATGGAAAATCC+CGG - chr4_1:56597978-56597997 Msa0558010:CDS 40.0%
TGTTCATCTCTAAGTTACCC+CGG + chr4_1:56598000-56598019 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG - chr4_1:56598007-56598026 Msa0558010:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG - chr4_1:56598064-56598083 Msa0558010:CDS 40.0%
CTTATTGCAATAGGGGAATG+AGG + chr4_1:56598302-56598321 None:intergenic 40.0%
GCTTGCTTATTCTTTACAGG+AGG - chr4_1:56598364-56598383 Msa0558010:intron 40.0%
GGGAGATCATAACAGAGAAT+AGG - chr4_1:56598591-56598610 Msa0558010:intron 40.0%
TTTGCAGGGTGAAAAGATCA+AGG - chr4_1:56598816-56598835 Msa0558010:intron 40.0%
TGAAGAAACTGTCAAGAGTG+TGG - chr4_1:56598931-56598950 Msa0558010:CDS 40.0%
GAACAAGGTGGAACTTATCA+TGG + chr4_1:56598967-56598986 None:intergenic 40.0%
TATCAGTATGCACCAAAGAC+AGG + chr4_1:56599276-56599295 None:intergenic 40.0%
! TGTCTTTGGTGCATACTGAT+AGG - chr4_1:56599275-56599294 Msa0558010:CDS 40.0%
GCATACTGATAGGATAGCTA+AGG - chr4_1:56599285-56599304 Msa0558010:CDS 40.0%
! GTTTGTTGATGGGGATGAAG+AGG + chr4_1:56593298-56593317 None:intergenic 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG + chr4_1:56593307-56593326 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG + chr4_1:56593308-56593327 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG + chr4_1:56593309-56593328 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG + chr4_1:56593328-56593347 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG + chr4_1:56593339-56593358 None:intergenic 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG + chr4_1:56593382-56593401 None:intergenic 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG + chr4_1:56593503-56593522 None:intergenic 45.0%
!! ATTCTCTCCGTTGCTGTTTC+CGG - chr4_1:56593596-56593615 Msa0558010:three_prime_UTR 45.0%
CAATCTACCGGAAACAGCAA+CGG + chr4_1:56593606-56593625 None:intergenic 45.0%
AAGCTATCCTCGAGAGATGA+TGG - chr4_1:56593905-56593924 Msa0558010:intron 45.0%
TGATGGAAACTGATTGGGAG+AGG + chr4_1:56593985-56594004 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr4_1:56594022-56594041 None:intergenic 45.0%
GTTCTGATCTGATGATCTCC+AGG + chr4_1:56594664-56594683 None:intergenic 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG - chr4_1:56594728-56594747 Msa0558010:intron 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG - chr4_1:56594729-56594748 Msa0558010:intron 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG - chr4_1:56594730-56594749 Msa0558010:intron 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG - chr4_1:56594731-56594750 Msa0558010:intron 45.0%
GCCTATGCTCAATGGATGAA+TGG - chr4_1:56595055-56595074 Msa0558010:intron 45.0%
CCCATTCATCCATTGAGCAT+AGG + chr4_1:56595059-56595078 None:intergenic 45.0%
CGTGCAGGATGACGATTTAA+CGG - chr4_1:56595150-56595169 Msa0558010:intron 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG + chr4_1:56595207-56595226 None:intergenic 45.0%
! GTTTCTAAAAGCGCGTCACA+AGG - chr4_1:56595292-56595311 Msa0558010:intron 45.0%
! TAGATCTGGAACTAGAGTGG+TGG - chr4_1:56595351-56595370 Msa0558010:intron 45.0%
GTCATCTCAGGACCTAATAC+TGG - chr4_1:56595373-56595392 Msa0558010:intron 45.0%
ATCTCAGGACCTAATACTGG+AGG - chr4_1:56595376-56595395 Msa0558010:intron 45.0%
TCTCAGGACCTAATACTGGA+GGG - chr4_1:56595377-56595396 Msa0558010:intron 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG + chr4_1:56595388-56595407 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG - chr4_1:56595408-56595427 Msa0558010:intron 45.0%
GCAAGGATAAGGTCAAACCA+AGG + chr4_1:56595490-56595509 None:intergenic 45.0%
GACCTTATCCTTGCGGATAT+TGG - chr4_1:56595496-56595515 Msa0558010:intron 45.0%
CTCCAATATCCGCAAGGATA+AGG + chr4_1:56595501-56595520 None:intergenic 45.0%
AGTGGAACTGATCCTTCAGA+AGG - chr4_1:56595775-56595794 Msa0558010:CDS 45.0%
! TGCCGCAATGGAATTTTCAC+TGG - chr4_1:56595915-56595934 Msa0558010:CDS 45.0%
CCAACTTATAGGGTTCTCTG+GGG - chr4_1:56595949-56595968 Msa0558010:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG - chr4_1:56596098-56596117 Msa0558010:intron 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG - chr4_1:56596491-56596510 Msa0558010:CDS 45.0%
AAGGAAAAGAGTGAGGGAGA+CGG + chr4_1:56596614-56596633 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG + chr4_1:56596673-56596692 None:intergenic 45.0%
TATGGCAAAGGAAGCTCAAC+AGG - chr4_1:56596694-56596713 Msa0558010:CDS 45.0%
ACAGGTCCAACAAGAGTTAG+AGG - chr4_1:56596712-56596731 Msa0558010:CDS 45.0%
AAAGCTCATACTCCTGCTGT+TGG - chr4_1:56596854-56596873 Msa0558010:CDS 45.0%
GTTGCAGGATTCTTTGCACT+TGG + chr4_1:56597067-56597086 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG - chr4_1:56597084-56597103 Msa0558010:intron 45.0%
! ACTAGTTCTCCCACTCATCA+GGG - chr4_1:56597085-56597104 Msa0558010:intron 45.0%
GATAAGACAGTTAGAGCGGA+AGG - chr4_1:56597266-56597285 Msa0558010:CDS 45.0%
TTACATACTCCCTCCGCTAT+TGG + chr4_1:56597552-56597571 None:intergenic 45.0%
AAATAGCTAGAGGGGTTGAG+AGG - chr4_1:56597570-56597589 Msa0558010:CDS 45.0%
AATAGCTAGAGGGGTTGAGA+GGG - chr4_1:56597571-56597590 Msa0558010:CDS 45.0%
ATTTGCACCTGCCAATCTGT+TGG - chr4_1:56597848-56597867 Msa0558010:CDS 45.0%
TTTGCACCTGCCAATCTGTT+GGG - chr4_1:56597849-56597868 Msa0558010:CDS 45.0%
ACCACTGAATGGAAAATCCC+GGG - chr4_1:56597979-56597998 Msa0558010:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG + chr4_1:56597999-56598018 None:intergenic 45.0%
TTCTTAGATGTTTGCACCGC+TGG + chr4_1:56598049-56598068 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG - chr4_1:56598161-56598180 Msa0558010:intron 45.0%
GGTTCAAAATGAGTGACACG+AGG + chr4_1:56598226-56598245 None:intergenic 45.0%
GCAATAAGCTAACAGCAGCT+TGG - chr4_1:56598314-56598333 Msa0558010:intron 45.0%
AAAATACCCTCGCCAAAAGC+AGG + chr4_1:56598341-56598360 None:intergenic 45.0%
GAAGGGTGAAGCTAATGAGT+AGG + chr4_1:56598630-56598649 None:intergenic 45.0%
TTCTCATTCACACACACCTC+TGG - chr4_1:56598709-56598728 Msa0558010:intron 45.0%
! AGAAACTGTCAAGAGTGTGG+TGG - chr4_1:56598934-56598953 Msa0558010:CDS 45.0%
! GAAACTGTCAAGAGTGTGGT+GGG - chr4_1:56598935-56598954 Msa0558010:CDS 45.0%
! AAACTGTCAAGAGTGTGGTG+GGG - chr4_1:56598936-56598955 Msa0558010:CDS 45.0%
AGGTGGAACTTATCATGGAC+AGG + chr4_1:56598962-56598981 None:intergenic 45.0%
! GTGGTGGTCTTGATTGGTAT+CGG + chr4_1:56599011-56599030 None:intergenic 45.0%
TTCTCCACTCGATGGAACAT+CGG + chr4_1:56599163-56599182 None:intergenic 45.0%
GTACTTCTCCTTGCAATACG+CGG + chr4_1:56599203-56599222 None:intergenic 45.0%
CACCAAAGACAGGTACGATT+AGG + chr4_1:56599266-56599285 None:intergenic 45.0%
!! TATATATATATATATATATG+TGG - chr4_1:56595602-56595621 Msa0558010:CDS 5.0%
AGGTTGCAGGTGAGTTGCAT+CGG + chr4_1:56593278-56593297 None:intergenic 50.0%
AAGGAGAAGCGAGGGATTGA+GGG + chr4_1:56593320-56593339 None:intergenic 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG + chr4_1:56593329-56593348 None:intergenic 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG + chr4_1:56593347-56593366 None:intergenic 50.0%
! GGATTGGACTGAGTTGGACT+CGG + chr4_1:56593366-56593385 None:intergenic 50.0%
! GCTATCGGATTGGACTGAGT+TGG + chr4_1:56593372-56593391 None:intergenic 50.0%
TTGAGGAATGAGTCTGGCAG+CGG + chr4_1:56593537-56593556 None:intergenic 50.0%
TCTTCGAACGGTGCAAAGCT+CGG + chr4_1:56593639-56593658 None:intergenic 50.0%
AGCAGCGAGTGTTCTTCGAA+CGG + chr4_1:56593651-56593670 None:intergenic 50.0%
TTCGATAAGCTGTGCGACCA+AGG - chr4_1:56594197-56594216 Msa0558010:three_prime_UTR 50.0%
TGCTAGAGCAAGTGAAGACC+TGG - chr4_1:56594643-56594662 Msa0558010:CDS 50.0%
! CGTCGATCTAGAATGTGCGT+GGG - chr4_1:56594779-56594798 Msa0558010:intron 50.0%
TAGAATGTGCGTGGGCATCA+GGG - chr4_1:56594787-56594806 Msa0558010:intron 50.0%
TGGGCATCAGGGCTTCATAT+AGG - chr4_1:56594798-56594817 Msa0558010:intron 50.0%
CAAGAGCTGCCTATGCTCAA+TGG - chr4_1:56595047-56595066 Msa0558010:intron 50.0%
TATGCGGCATCCATTACTCC+TGG - chr4_1:56595186-56595205 Msa0558010:intron 50.0%
AGAGACGACTCCAGGAGTAA+TGG + chr4_1:56595199-56595218 None:intergenic 50.0%
ACTAGAGTGGTGGTCATCTC+AGG - chr4_1:56595361-56595380 Msa0558010:intron 50.0%
GGTGATCTCCAATATCCGCA+AGG + chr4_1:56595507-56595526 None:intergenic 50.0%
TGCGGATATTGGAGATCACC+AGG - chr4_1:56595507-56595526 Msa0558010:intron 50.0%
AACTGATCCTTCAGAAGGCG+TGG - chr4_1:56595780-56595799 Msa0558010:CDS 50.0%
CCCCAGAGAACCCTATAAGT+TGG + chr4_1:56595952-56595971 None:intergenic 50.0%
! AGGGTTCTCTGGGGATGTAT+CGG - chr4_1:56595958-56595977 Msa0558010:CDS 50.0%
TGACCATGCACAAAAGTGGG+TGG - chr4_1:56596035-56596054 Msa0558010:intron 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG + chr4_1:56596041-56596060 None:intergenic 50.0%
AACCAGAACAGCAGCAAGAG+CGG - chr4_1:56596067-56596086 Msa0558010:intron 50.0%
! CGGACTTGCTCTCCAAATTG+TGG + chr4_1:56596920-56596939 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG - chr4_1:56596932-56596951 Msa0558010:CDS 50.0%
TTCCTCCCAATCCCTTCACA+CGG + chr4_1:56596940-56596959 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG - chr4_1:56596952-56596971 Msa0558010:CDS 50.0%
CCACAGTGGTAGAATTGCCT+GGG - chr4_1:56596966-56596985 Msa0558010:CDS 50.0%
CACAGTGGTAGAATTGCCTG+GGG - chr4_1:56596967-56596986 Msa0558010:CDS 50.0%
GCAGGATTCTTTGCACTTGG+TGG + chr4_1:56597064-56597083 None:intergenic 50.0%
TGAGTGGGAGAACTAGTTGC+AGG + chr4_1:56597082-56597101 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG + chr4_1:56597097-56597116 None:intergenic 50.0%
TACCTGCTTTCCCTGATGAG+TGG + chr4_1:56597098-56597117 None:intergenic 50.0%
! TCTAGTGAGTTGGGAACGGT+TGG - chr4_1:56597243-56597262 Msa0558010:CDS 50.0%
! CTAGTGAGTTGGGAACGGTT+GGG - chr4_1:56597244-56597263 Msa0558010:CDS 50.0%
TCAAGACCCAACAGATTGGC+AGG + chr4_1:56597858-56597877 None:intergenic 50.0%
CCACTGAATGGAAAATCCCG+GGG - chr4_1:56597980-56597999 Msa0558010:CDS 50.0%
AGCTGCGATCCATCTTGAGA+TGG - chr4_1:56598102-56598121 Msa0558010:intron 50.0%
! CGCTGATTGCCATCTCAAGA+TGG + chr4_1:56598114-56598133 None:intergenic 50.0%
GTAATACATGGGATGGGCAC+TGG - chr4_1:56598160-56598179 Msa0558010:intron 50.0%
! AATACATGGGATGGGCACTG+GGG - chr4_1:56598162-56598181 Msa0558010:intron 50.0%
GAGGAGAACAAACGTACCAG+AGG + chr4_1:56598728-56598747 None:intergenic 50.0%
TCTTCAACGGTCTTGATGCC+CGG + chr4_1:56598917-56598936 None:intergenic 50.0%
!! CTTGATTGGTATCGGTGTGG+CGG + chr4_1:56599003-56599022 None:intergenic 50.0%
!! GGTCTTGATTGGTATCGGTG+TGG + chr4_1:56599006-56599025 None:intergenic 50.0%
! AGCACAGTGGTGGTCTTGAT+TGG + chr4_1:56599017-56599036 None:intergenic 50.0%
AATCAAGACCACCACTGTGC+TGG - chr4_1:56599016-56599035 Msa0558010:CDS 50.0%
ATCAAGACCACCACTGTGCT+GGG - chr4_1:56599017-56599036 Msa0558010:CDS 50.0%
CCTCACCACCATTTCAGAGA+CGG + chr4_1:56599071-56599090 None:intergenic 50.0%
CAACTGCATTCTCCACTCGA+TGG + chr4_1:56599171-56599190 None:intergenic 50.0%
!! GATTATTGGTGCCGCAGAGA+AGG - chr4_1:56599231-56599250 Msa0558010:CDS 50.0%
GGCCTAATCGTACCTGTCTT+TGG - chr4_1:56599261-56599280 Msa0558010:CDS 50.0%
GATGGGGATGAAGAGGTTGC+AGG + chr4_1:56593291-56593310 None:intergenic 55.0%
GAAGGAGAAGCGAGGGATTG+AGG + chr4_1:56593321-56593340 None:intergenic 55.0%
AACAACGCCCGTTTACCCGT+CGG - chr4_1:56593470-56593489 Msa0558010:three_prime_UTR 55.0%
AGTACGTCCGACGGGTAAAC+GGG + chr4_1:56593480-56593499 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG + chr4_1:56593481-56593500 None:intergenic 55.0%
TCTGTTGGAGTACGTCCGAC+GGG + chr4_1:56593488-56593507 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG + chr4_1:56593489-56593508 None:intergenic 55.0%
CTTCGAACGGTGCAAAGCTC+GGG + chr4_1:56593638-56593657 None:intergenic 55.0%
AAGAACACTCGCTGCTGCCA+GGG - chr4_1:56593655-56593674 Msa0558010:three_prime_UTR 55.0%
! GCGTCGATCTAGAATGTGCG+TGG - chr4_1:56594778-56594797 Msa0558010:intron 55.0%
CTAGAATGTGCGTGGGCATC+AGG - chr4_1:56594786-56594805 Msa0558010:intron 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG - chr4_1:56594842-56594861 Msa0558010:intron 55.0%
GTATGTTGCTCCAGAGCTGC+TGG + chr4_1:56594855-56594874 None:intergenic 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG - chr4_1:56594925-56594944 Msa0558010:intron 55.0%
CAATGACATTGCGGTCGTGC+AGG - chr4_1:56595135-56595154 Msa0558010:intron 55.0%
CTTGGCAGGCAGATGCATTC+CGG + chr4_1:56595452-56595471 None:intergenic 55.0%
GAAAGAGCCACGCCTTCTGA+AGG + chr4_1:56595790-56595809 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG + chr4_1:56596388-56596407 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG + chr4_1:56596422-56596441 None:intergenic 55.0%
GAGTGAGGGAGACGGATAGA+CGG + chr4_1:56596606-56596625 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG + chr4_1:56596655-56596674 None:intergenic 55.0%
CTGATGGGAGAACCAACAGC+AGG + chr4_1:56596869-56596888 None:intergenic 55.0%
!! GCTGTTGGTTCTCCCATCAG+TGG - chr4_1:56596869-56596888 Msa0558010:CDS 55.0%
ATGCGATCAGCGCCACTGAT+GGG + chr4_1:56596884-56596903 None:intergenic 55.0%
AATGCGATCAGCGCCACTGA+TGG + chr4_1:56596885-56596904 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG - chr4_1:56596925-56596944 Msa0558010:CDS 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG - chr4_1:56596926-56596945 Msa0558010:CDS 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG - chr4_1:56596931-56596950 Msa0558010:CDS 55.0%
GCCACAGTGGTAGAATTGCC+TGG - chr4_1:56596965-56596984 Msa0558010:CDS 55.0%
CCCAGGCAATTCTACCACTG+TGG + chr4_1:56596969-56596988 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG - chr4_1:56597093-56597112 Msa0558010:intron 55.0%
! CCCCGGGATTTTCCATTCAG+TGG + chr4_1:56597983-56598002 None:intergenic 55.0%
GGATCTACGAGGTATGCGAC+TGG - chr4_1:56598075-56598094 Msa0558010:CDS 55.0%
! CAGCAGCTTGGACCTGCTTT+TGG - chr4_1:56598326-56598345 Msa0558010:intron 55.0%
!! CTTGGACCTGCTTTTGGCGA+GGG - chr4_1:56598332-56598351 Msa0558010:intron 55.0%
ATGCGGTTCAACGCCGTCTA+CGG - chr4_1:56598860-56598879 Msa0558010:intron 55.0%
CTCCTTGGCGTATCCGTAGA+CGG + chr4_1:56598876-56598895 None:intergenic 55.0%
! GAGCTCATTGGAGCACTCCT+TGG + chr4_1:56598891-56598910 None:intergenic 55.0%
!! AGGAGTGCTCCAATGAGCTC+AGG - chr4_1:56598891-56598910 Msa0558010:intron 55.0%
GGATCTCATCGGGAACAAGG+TGG + chr4_1:56598979-56598998 None:intergenic 55.0%
GGAGGATCTCATCGGGAACA+AGG + chr4_1:56598982-56599001 None:intergenic 55.0%
TTCAGAGACGGTGCCTACGT+TGG + chr4_1:56599059-56599078 None:intergenic 55.0%
! CGTAGGCACCGTCTCTGAAA+TGG - chr4_1:56599060-56599079 Msa0558010:CDS 55.0%
!! AGGCACCGTCTCTGAAATGG+TGG - chr4_1:56599063-56599082 Msa0558010:CDS 55.0%
!! CCGTCTCTGAAATGGTGGTG+AGG - chr4_1:56599068-56599087 Msa0558010:CDS 55.0%
GTCTCCGATGTTCCATCGAG+TGG - chr4_1:56599156-56599175 Msa0558010:CDS 55.0%
GGAGAATGCAGTTGCGCCAA+AGG - chr4_1:56599177-56599196 Msa0558010:CDS 55.0%
TCCTTGCAATACGCGGCCTT+TGG + chr4_1:56599196-56599215 None:intergenic 55.0%
TGCCGCAGAGAAGGAACGTA+AGG - chr4_1:56599240-56599259 Msa0558010:CDS 55.0%
GGCCTTACGTTCCTTCTCTG+CGG + chr4_1:56599245-56599264 None:intergenic 55.0%
! GCAGGTGAGTTGCATCGGTG+TGG + chr4_1:56593273-56593292 None:intergenic 60.0%
! TAAACGGGCGTTGTTGGCGG+CGG + chr4_1:56593465-56593484 None:intergenic 60.0%
! GGGTAAACGGGCGTTGTTGG+CGG + chr4_1:56593468-56593487 None:intergenic 60.0%
! GACGGGTAAACGGGCGTTGT+TGG + chr4_1:56593471-56593490 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG + chr4_1:56593534-56593553 None:intergenic 60.0%
GAAGAACACTCGCTGCTGCC+AGG - chr4_1:56593654-56593673 Msa0558010:three_prime_UTR 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG - chr4_1:56594582-56594601 Msa0558010:CDS 60.0%
TCCTGCGCTCCAAGCCCATT+AGG + chr4_1:56594586-56594605 None:intergenic 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG + chr4_1:56596072-56596091 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG - chr4_1:56596072-56596091 Msa0558010:intron 60.0%
ACAGCTCTTGGCTATCCCCG+AGG + chr4_1:56596427-56596446 None:intergenic 60.0%
GTCCGTGTGAAGGGATTGGG+AGG - chr4_1:56596935-56596954 Msa0558010:CDS 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG - chr4_1:56597580-56597599 Msa0558010:CDS 60.0%
!! GCTTGGACCTGCTTTTGGCG+AGG - chr4_1:56598331-56598350 Msa0558010:intron 60.0%
! AGACGGCGTTGAACCGCATG+AGG + chr4_1:56598859-56598878 None:intergenic 60.0%
GTGCTCCAATGAGCTCAGGC+CGG - chr4_1:56598895-56598914 Msa0558010:intron 60.0%
TGCTCCAATGAGCTCAGGCC+GGG - chr4_1:56598896-56598915 Msa0558010:intron 60.0%
! GTGTGGCGGAGGATCTCATC+GGG + chr4_1:56598989-56599008 None:intergenic 60.0%
! GGTGTGGCGGAGGATCTCAT+CGG + chr4_1:56598990-56599009 None:intergenic 60.0%
!! GATTGGTATCGGTGTGGCGG+AGG + chr4_1:56599000-56599019 None:intergenic 60.0%
ACGGTGCCTACGTTGGCAAC+GGG + chr4_1:56599052-56599071 None:intergenic 60.0%
GACGGTGCCTACGTTGGCAA+CGG + chr4_1:56599053-56599072 None:intergenic 60.0%
TTACTCCAAGTGCGAGCCCG+TGG - chr4_1:56599093-56599112 Msa0558010:CDS 60.0%
AGCCACAGTCTGCTCTGCCA+CGG + chr4_1:56599113-56599132 None:intergenic 60.0%
GGCAGAGCAGACTGTGGCTT+CGG - chr4_1:56599114-56599133 Msa0558010:CDS 60.0%
GCCAAAGGCCGCGTATTGCA+AGG - chr4_1:56599192-56599211 Msa0558010:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG + chr4_1:56593447-56593466 None:intergenic 65.0%
CGCCGTCTACGGATACGCCA+AGG - chr4_1:56598871-56598890 Msa0558010:intron 65.0%
GATGCCCGGCCTGAGCTCAT+TGG + chr4_1:56598903-56598922 None:intergenic 65.0%
ACCACCACTGTGCTGGGCAC+AGG - chr4_1:56599023-56599042 Msa0558010:CDS 65.0%
CCACCACTGTGCTGGGCACA+GGG - chr4_1:56599024-56599043 Msa0558010:CDS 65.0%
AGGGCTCCCGTTGCCAACGT+AGG - chr4_1:56599043-56599062 Msa0558010:CDS 65.0%
GCCACAGTCTGCTCTGCCAC+GGG + chr4_1:56599112-56599131 None:intergenic 65.0%
AGCAGACTGTGGCTTCGGCG+TGG - chr4_1:56599119-56599138 Msa0558010:CDS 65.0%
TGTGGCTTCGGCGTGGCAGA+AGG - chr4_1:56599126-56599145 Msa0558010:CDS 65.0%
CCCTGTGCCCAGCACAGTGG+TGG + chr4_1:56599027-56599046 None:intergenic 70.0%
GAGCCCTGTGCCCAGCACAG+TGG + chr4_1:56599030-56599049 None:intergenic 70.0%
CTCTGCCACGGGCTCGCACT+TGG + chr4_1:56599101-56599120 None:intergenic 70.0%
GCCCGTGGCAGAGCAGACTG+TGG - chr4_1:56599108-56599127 Msa0558010:CDS 70.0%
! ACGGGCGTTGTTGGCGGCGG+AGG + chr4_1:56593462-56593481 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 56593211 56599449 56593211 ID=Msa0558010;Name=Msa0558010
chr4_1 mRNA 56593211 56599449 56593211 ID=Msa0558010-mRNA-1;Parent=Msa0558010;Name=Msa0558010-mRNA-1;_AED=0.12;_eAED=0.12;_QI=67|1|1|1|0.6|0.33|6|1066|913
chr4_1 exon 56593211 56593837 56593211 ID=Msa0558010-mRNA-1:exon:17073;Parent=Msa0558010-mRNA-1
chr4_1 exon 56593930 56594683 56593930 ID=Msa0558010-mRNA-1:exon:17072;Parent=Msa0558010-mRNA-1
chr4_1 exon 56595546 56596010 56595546 ID=Msa0558010-mRNA-1:exon:17071;Parent=Msa0558010-mRNA-1
chr4_1 exon 56596466 56596990 56596466 ID=Msa0558010-mRNA-1:exon:17070;Parent=Msa0558010-mRNA-1
chr4_1 exon 56597132 56598116 56597132 ID=Msa0558010-mRNA-1:exon:17069;Parent=Msa0558010-mRNA-1
chr4_1 exon 56598931 56599449 56598931 ID=Msa0558010-mRNA-1:exon:17068;Parent=Msa0558010-mRNA-1
chr4_1 five_prime_UTR 56599383 56599449 56599383 ID=Msa0558010-mRNA-1:five_prime_utr;Parent=Msa0558010-mRNA-1
chr4_1 CDS 56598931 56599382 56598931 ID=Msa0558010-mRNA-1:cds;Parent=Msa0558010-mRNA-1
chr4_1 CDS 56597132 56598116 56597132 ID=Msa0558010-mRNA-1:cds;Parent=Msa0558010-mRNA-1
chr4_1 CDS 56596466 56596990 56596466 ID=Msa0558010-mRNA-1:cds;Parent=Msa0558010-mRNA-1
chr4_1 CDS 56595546 56596010 56595546 ID=Msa0558010-mRNA-1:cds;Parent=Msa0558010-mRNA-1
chr4_1 CDS 56594369 56594683 56594369 ID=Msa0558010-mRNA-1:cds;Parent=Msa0558010-mRNA-1
chr4_1 three_prime_UTR 56593930 56594368 56593930 ID=Msa0558010-mRNA-1:three_prime_utr;Parent=Msa0558010-mRNA-1
chr4_1 three_prime_UTR 56593211 56593837 56593211 ID=Msa0558010-mRNA-1:three_prime_utr;Parent=Msa0558010-mRNA-1
Gene Sequence

>Msa0558010

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTTTCTGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAACGCCCGTTTACCCGTCGGACGTACTCCAACAGACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACTTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCGGTAGATTGTTGACTATTCCCGAGCTTTGCACCGTTCGAAGAACACTCGCTGCTGCCAGGGAATTGTTTGATAGTTTGAAACACTTGGCTTCTGTATCTAATCATTCACACAGGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGCTAGAGCAAGTGAAGACCTGGAGATCATCAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATGTGCGTGGGCATCAGGGCTTCATATAGGTATTTGCTTCCAGAAGGTATAGTTCTGAATGCCAGCAGCTCTGGAGCAACATACTTTATGGAACCGAAAAAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGGTTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTTTAGGTACTCTTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTCGTGCAGGATGACGATTTAACGGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTAATGGAAATGGAACAATGGTTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTGGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCGGATATTGGAGATCACCAGTCCCTTGAACAAAATCTCTCAACTTTTAGTGGGCACATCTCACGTATCCGTAAGTTTTTGGAAGTTGCCTCAAAACAATCACTTGTTCTCATTGATGAAATTGGTAGTGGAACTGATCCTTCAGAAGGCGTGGCTCTTTCTGCCAGTATCTTACAATATCTGCGTGAACATGTTAACTTGGCTGTTGTGACCACTCATTATGCTGATCTAAGTACTTTGAAGGAAAGGGATACATGTTTTGAAAATGCCGCAATGGAATTTTCACTGGAAACCTTGCAACCAACTTATAGGGTTCTCTGGGGATGTATCGGTGATTCAAATGCATTAAGCATAGCGCAATCTATTGCCTTTGATAAAAATATAATTGACCATGCACAAAAGTGGGTGGAGAAGTTAAAACCAGAACAGCAGCAAGAGCGGAGAGGAATGCTCTATCAGTCATTACAGGAGGAAAAAAATCGGTTAAAGGCTCAAGCTGAAAAAGCTGCTTCCATTCATGCAGAAATTGTGAACGTGTACTCTGAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACAGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTGTAATACAGAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCTGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGGTACAGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGAAACCACTGAATGGAAAATCCCGGGGTAACTTAGAGATGAACAGCAGCAATGGTGATATTTATTATGGTCCAGCGGTGCAAACATCTAAGAATACTGTGGATCTACGAGGTATGCGACTGGAAGAAGCTGCGATCCATCTTGAGATGGCAATCAGCGCAAGTCAGCCATATTCAGTTCTCTTTGTAATACATGGGATGGGCACTGGGGCTGTTAAAGATCGTGCACTTGCTATTCTGCAAAAGCATCCTCGTGTCACTCATTTTGAACCAGAAAGTCCAATGAATTATGGATGTACTGTTGCACGTGTTAAGTGA
Protein sequence

>Msa0558010

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANNARLPVGRTPTDSQKLLDQTSAARLIPQQQLDFSGIHDLTDILSVAVSGRLLTIPELCTVRRTLAAARELFDSLKHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILARASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKKAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGNGNGTMVSKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVNLAVVTTHYADLSTLKERDTCFENAAMEFSLETLQPTYRVLWGCIGDSNALSIAQSIAFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIVNVYSEIQREAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQKPLNGKSRGNLEMNSSNGDIYYGPAVQTSKNTVDLRGMRLEEAAIHLEMAISASQPYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTVARVK*