AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0004790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0004790 MtrunA17_Chr1g0153181 96.375 662 9 1 1 662 1 647 0.0 1304
Msa0004790 MtrunA17_Chr4g0044541 73.293 659 153 6 1 653 1 642 0.0 932
Msa0004790 MtrunA17_Chr3g0134141 71.987 639 142 7 25 662 17 619 0.0 895
Msa0004790 MtrunA17_Chr3g0134141 34.084 311 172 5 112 421 16 294 2.94e-44 167
Msa0004790 MtrunA17_Chr1g0201151 55.338 665 255 16 9 660 10 645 0.0 681
Msa0004790 MtrunA17_Chr6g0466501 50.000 652 250 15 14 644 12 608 0.0 566
Msa0004790 MtrunA17_Chr6g0465751 49.845 644 258 14 21 644 14 612 0.0 566
Msa0004790 MtrunA17_Chr6g0466451 51.554 547 219 14 106 643 1 510 1.32e-167 489
Msa0004790 MtrunA17_Chr6g0466451 36.934 287 162 5 33 302 16 300 8.49e-49 179
Msa0004790 MtrunA17_Chr6g0466451 32.857 210 118 5 32 222 105 310 9.09e-23 102
Msa0004790 MtrunA17_Chr6g0465631 51.371 547 220 14 106 643 1 510 9.41e-167 487
Msa0004790 MtrunA17_Chr6g0465631 36.934 287 162 5 33 302 16 300 8.57e-49 179
Msa0004790 MtrunA17_Chr6g0465631 32.857 210 118 5 32 222 105 310 9.25e-23 102
Msa0004790 MtrunA17_Chr6g0465691 49.132 576 222 14 90 644 1 526 1.72e-164 482
Msa0004790 MtrunA17_Chr6g0465691 36.299 281 165 3 33 300 32 311 6.36e-49 179
Msa0004790 MtrunA17_Chr6g0465691 31.551 187 110 2 32 201 118 303 1.98e-22 101
Msa0004790 MtrunA17_Chr0c09g0493511 47.871 587 239 15 90 656 1 540 4.73e-159 468
Msa0004790 MtrunA17_Chr0c09g0493511 37.367 281 162 3 33 300 32 311 2.27e-51 186
Msa0004790 MtrunA17_Chr0c09g0493511 32.620 187 108 2 32 201 118 303 1.70e-24 108
Msa0004790 MtrunA17_Chr7g0265341 43.101 645 302 12 23 641 61 666 7.42e-156 466
Msa0004790 MtrunA17_Chr1g0179701 41.667 456 223 6 33 484 63 479 1.47e-110 345
Msa0004790 MtrunA17_Chr1g0179701 34.768 302 162 5 120 419 62 330 1.42e-42 162
Msa0004790 MtrunA17_Chr1g0179701 29.570 186 118 2 32 205 241 425 4.72e-21 97.4
Msa0004790 MtrunA17_Chr3g0110211 37.791 172 104 3 32 201 25 195 1.36e-29 121
Msa0004790 MtrunA17_Chr3g0110211 30.500 200 126 6 113 309 18 207 6.06e-19 89.4
Msa0004790 MtrunA17_Chr3g0110211 29.268 205 109 6 213 414 27 198 1.00e-14 76.6
Msa0004790 MtrunA17_Chr1g0153871 29.670 273 180 7 122 388 99 365 3.37e-27 115
Msa0004790 MtrunA17_Chr1g0153871 27.376 263 167 7 33 276 98 355 2.07e-23 103
Msa0004790 MtrunA17_Chr2g0288251 28.517 263 161 9 33 273 61 318 1.32e-24 106
Msa0004790 MtrunA17_Chr2g0288251 25.632 277 189 11 122 388 62 331 2.29e-18 87.8
Msa0004790 MtrunA17_Chr2g0288251 27.273 176 105 4 33 190 156 326 2.58e-12 69.3
Msa0004790 MtrunA17_Chr3g0133651 28.328 293 193 9 107 388 76 362 4.11e-24 105
Msa0004790 MtrunA17_Chr3g0133651 26.894 264 168 7 33 276 94 352 6.38e-21 95.9
Msa0004790 MtrunA17_Chr3g0133651 30.857 175 99 4 33 190 188 357 5.45e-16 80.9
Msa0004790 MtrunA17_Chr2g0328791 24.534 322 197 8 33 314 16 331 7.48e-23 102
Msa0004790 MtrunA17_Chr2g0328791 23.636 275 181 7 121 371 16 285 8.04e-15 77.4
Msa0004790 MtrunA17_Chr3g0139111 27.143 280 163 7 33 279 61 332 1.15e-22 101
Msa0004790 MtrunA17_Chr3g0139111 25.899 278 179 7 112 371 52 320 8.91e-17 83.6
Msa0004790 MtrunA17_Chr4g0074711 27.305 282 169 10 14 273 64 331 1.56e-22 100
Msa0004790 MtrunA17_Chr4g0074711 25.874 286 196 10 112 388 66 344 7.61e-19 89.4
Msa0004790 MtrunA17_Chr6g0465621 66.667 60 20 0 29 88 22 81 5.57e-21 87.8
Msa0004790 MtrunA17_Chr6g0466441 66.667 60 20 0 29 88 22 81 5.57e-21 87.8
Msa0004790 MtrunA17_Chr4g0070231 27.119 295 181 9 112 383 38 321 2.85e-20 93.6
Msa0004790 MtrunA17_Chr4g0070231 25.818 275 162 7 33 274 47 312 9.25e-20 92.0
Msa0004790 MtrunA17_Chr0c09g0493521 56.923 65 28 0 21 85 14 78 5.79e-20 84.7
Msa0004790 MtrunA17_Chr6g0465741 64.179 67 23 1 586 651 40 106 7.02e-20 85.5
Msa0004790 MtrunA17_Chr0c09g0493581 55.556 72 27 1 14 85 12 78 3.16e-19 82.4
Msa0004790 MtrunA17_Chr6g0465701 51.899 79 33 1 14 92 12 85 3.96e-19 82.8
Msa0004790 MtrunA17_Chr8g0344491 26.374 273 163 7 33 274 63 328 7.63e-19 89.7
Msa0004790 MtrunA17_Chr8g0344491 26.429 280 172 9 111 371 57 321 1.24e-16 82.8
Msa0004790 MtrunA17_Chr4g0045221 25.795 283 166 8 33 276 117 394 3.35e-18 87.8
Msa0004790 MtrunA17_Chr4g0045221 27.723 303 167 11 122 388 118 404 6.51e-18 87.0
Msa0004790 MtrunA17_Chr4g0045221 28.095 210 122 7 205 409 110 295 3.49e-11 65.9
Msa0004790 MtrunA17_Chr6g0466541 36.111 144 69 2 154 297 2 122 8.11e-18 80.1
Msa0004790 MtrunA17_Chr8g0372111 24.219 256 172 8 34 278 420 664 3.41e-15 79.7
Msa0004790 MtrunA17_Chr8g0335981 24.016 254 170 7 34 276 217 458 4.78e-15 79.0
Msa0004790 MtrunA17_Chr8g0335981 23.920 301 179 11 115 400 210 475 1.97e-11 67.4
Msa0004790 MtrunA17_Chr4g0026301 24.590 244 168 6 32 269 110 343 6.90e-15 77.8
Msa0004790 MtrunA17_Chr7g0276201 22.677 269 189 5 32 292 104 361 9.41e-15 77.4
Msa0004790 MtrunA17_Chr7g0276201 27.306 271 162 11 109 371 93 336 4.97e-14 75.1
Msa0004790 MtrunA17_Chr6g0466551 61.538 65 24 1 581 644 34 98 1.52e-14 70.9
Msa0004790 MtrunA17_Chr1g0177101 27.778 162 105 2 34 183 110 271 6.30e-14 73.2
Msa0004790 MtrunA17_Chr1g0177101 28.505 214 126 6 196 405 93 283 1.85e-11 65.9
Msa0004790 MtrunA17_Chr1g0181111 29.016 193 108 4 25 192 81 269 6.64e-14 72.8
Msa0004790 MtrunA17_Chr7g0260761 24.668 377 242 9 34 374 279 649 1.01e-13 74.7
Msa0004790 MtrunA17_Chr3g0087481 31.414 191 120 6 184 371 34 216 1.54e-13 70.9
Msa0004790 MtrunA17_Chr3g0087481 25.146 171 116 3 34 192 62 232 1.25e-11 65.1
Msa0004790 MtrunA17_Chr7g0267571 28.415 183 102 4 28 185 100 278 1.95e-13 72.0
Msa0004790 MtrunA17_Chr7g0267571 26.901 171 106 4 122 276 111 278 2.48e-11 65.5
Msa0004790 MtrunA17_Chr7g0217261 23.828 256 179 7 19 269 338 582 5.02e-13 72.4
Msa0004790 MtrunA17_Chr4g0058151 27.545 167 112 3 34 192 124 289 5.46e-13 70.1
Msa0004790 MtrunA17_Chr7g0266451 25.306 245 162 8 32 269 101 331 1.51e-12 70.5
Msa0004790 MtrunA17_Chr3g0116631 27.059 170 112 3 34 192 111 279 2.12e-12 68.6
Msa0004790 MtrunA17_Chr3g0116631 26.111 180 126 4 120 292 109 288 6.26e-11 63.9
Msa0004790 MtrunA17_Chr3g0121631 37.000 100 57 2 10 109 19 112 3.09e-12 64.7
Msa0004790 MtrunA17_Chr1g0211191 26.708 161 100 2 33 176 71 230 5.71e-12 68.6
Msa0004790 MtrunA17_Chr3g0101061 27.411 197 119 6 207 398 36 213 1.37e-11 67.4
Msa0004790 MtrunA17_Chr3g0101061 27.011 174 109 5 122 279 42 213 5.30e-11 65.5
Msa0004790 MtrunA17_Chr7g0266751 38.272 81 49 1 115 194 27 107 2.25e-11 62.0
Msa0004790 MtrunA17_Chr4g0068631 26.144 153 110 1 34 183 90 242 4.20e-11 66.2
Msa0004790 MtrunA17_Chr4g0068631 24.757 206 126 5 210 413 87 265 7.60e-11 65.5
Msa0004790 MtrunA17_Chr4g0031091 35.802 81 51 1 115 194 28 108 4.78e-11 60.5
Msa0004790 MtrunA17_Chr7g0259641 28.182 220 142 7 121 329 586 800 4.92e-11 66.2
Msa0004790 MtrunA17_Chr7g0259641 25.946 185 113 5 26 192 579 757 7.37e-11 65.5
Msa0004790 MtrunA17_Chr5g0447761 27.174 184 108 6 116 279 2 179 6.26e-11 65.1
Msa0004790 MtrunA17_Chr2g0290191 23.864 176 115 4 34 190 6 181 7.30e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0004790 AT4G34110.1 66.567 667 178 7 1 660 1 629 0.0 847
Msa0004790 AT1G49760.1 65.944 646 185 8 31 662 44 668 0.0 809
Msa0004790 AT1G49760.2 65.944 646 185 8 31 662 44 668 0.0 809
Msa0004790 AT2G23350.1 63.256 645 192 11 32 661 46 660 0.0 782
Msa0004790 AT1G22760.1 52.914 652 264 14 2 640 23 644 0.0 600
Msa0004790 AT1G71770.1 51.938 645 270 13 31 658 58 679 0.0 590
Msa0004790 AT1G71770.2 51.938 645 270 13 31 658 58 679 0.0 590
Msa0004790 AT2G36660.1 38.510 631 300 14 30 641 22 583 4.07e-126 387
Msa0004790 AT1G34140.1 44.608 408 180 8 90 488 1 371 1.79e-106 329
Msa0004790 AT1G34140.1 35.336 283 166 4 33 300 32 312 1.47e-45 167
Msa0004790 AT1G34140.1 29.703 202 119 4 30 212 117 314 2.60e-22 100
Msa0004790 AT3G16380.1 41.958 429 220 9 33 452 22 430 1.50e-96 307
Msa0004790 AT3G16380.1 33.333 186 108 2 31 201 201 385 8.75e-23 103
Msa0004790 AT2G18510.1 36.047 172 107 3 32 201 25 195 1.22e-27 115
Msa0004790 AT2G18510.1 26.230 183 127 5 113 292 18 195 1.05e-14 76.6
Msa0004790 AT2G18510.1 27.805 205 112 6 213 414 27 198 8.21e-13 70.9
Msa0004790 AT1G47490.1 30.325 277 178 9 122 388 103 374 6.24e-24 105
Msa0004790 AT1G47490.1 26.493 268 168 8 33 276 102 364 1.93e-19 92.0
Msa0004790 AT1G47490.1 29.944 177 100 4 33 190 198 369 1.84e-15 79.7
Msa0004790 AT1G11650.2 28.788 264 163 10 33 276 63 321 3.76e-23 102
Msa0004790 AT1G11650.2 25.969 258 177 8 121 370 63 314 2.13e-17 85.5
Msa0004790 AT1G11650.2 26.519 181 100 4 33 190 156 326 4.70e-13 72.0
Msa0004790 AT5G54900.1 26.792 265 168 9 33 276 61 320 6.16e-23 102
Msa0004790 AT5G54900.1 24.627 268 189 10 110 371 51 311 2.43e-17 85.1
Msa0004790 AT5G54900.1 28.409 176 103 4 33 190 155 325 2.17e-13 72.8
Msa0004790 AT4G27000.1 26.236 263 170 8 33 276 81 338 1.39e-22 101
Msa0004790 AT4G27000.1 24.314 255 183 7 121 371 81 329 6.43e-16 80.9
Msa0004790 AT1G47500.1 30.325 277 178 9 122 388 105 376 1.65e-21 98.2
Msa0004790 AT1G47500.1 27.239 268 166 9 33 276 104 366 6.70e-19 90.5
Msa0004790 AT1G47500.1 30.508 177 99 4 33 190 200 371 1.30e-15 80.1
Msa0004790 AT1G11650.1 28.862 246 150 10 33 258 63 303 3.70e-21 95.1
Msa0004790 AT1G11650.1 25.403 248 174 7 121 363 63 304 1.47e-17 84.3
Msa0004790 AT5G19350.2 24.315 292 186 7 15 276 7 293 1.71e-20 95.1
Msa0004790 AT5G19350.2 23.774 265 183 5 121 371 25 284 2.70e-16 82.0
Msa0004790 AT5G19350.2 26.984 189 104 4 33 192 117 300 1.28e-13 73.9
Msa0004790 AT5G19350.1 23.986 296 186 7 15 276 7 297 2.65e-20 94.4
Msa0004790 AT5G19350.1 23.792 269 182 6 121 371 25 288 8.95e-17 83.6
Msa0004790 AT5G19350.1 26.425 193 104 4 33 192 117 304 3.77e-13 72.4
Msa0004790 AT3G14100.1 25.830 271 163 6 33 272 60 323 2.46e-19 91.7
Msa0004790 AT3G14100.1 27.758 281 167 10 111 371 54 318 9.25e-18 86.7
Msa0004790 AT1G54080.1 29.078 282 162 9 111 371 58 322 3.03e-19 91.3
Msa0004790 AT3G19130.1 25.714 280 165 8 33 276 109 381 5.34e-19 90.5
Msa0004790 AT3G19130.1 27.336 289 181 10 122 388 110 391 2.60e-17 85.5
Msa0004790 AT1G49600.3 26.374 273 167 7 33 276 120 387 8.14e-19 90.1
Msa0004790 AT1G49600.3 26.510 298 199 10 122 404 121 413 3.64e-18 88.2
Msa0004790 AT1G49600.2 26.374 273 167 7 33 276 120 387 8.14e-19 90.1
Msa0004790 AT1G49600.2 26.510 298 199 10 122 404 121 413 3.64e-18 88.2
Msa0004790 AT1G45100.1 22.812 377 250 10 30 371 62 432 9.85e-19 90.5
Msa0004790 AT1G45100.1 25.597 293 171 6 25 274 151 439 8.53e-17 84.3
Msa0004790 AT1G49600.1 26.374 273 167 7 33 276 120 387 1.09e-18 89.7
Msa0004790 AT1G49600.1 27.305 282 185 10 122 388 121 397 5.14e-18 87.8
Msa0004790 AT1G17370.2 26.715 277 172 7 111 371 49 310 1.95e-18 88.6
Msa0004790 AT1G17370.2 25.000 268 166 6 33 272 55 315 1.85e-17 85.9
Msa0004790 AT1G17370.1 27.857 280 168 10 111 371 49 313 2.70e-18 88.2
Msa0004790 AT1G17370.1 24.723 271 166 6 33 272 55 318 5.38e-17 84.3
Msa0004790 AT5G41690.1 21.459 466 252 12 33 406 69 512 4.14e-18 88.6
Msa0004790 AT5G41690.3 21.459 466 252 12 33 406 69 512 4.14e-18 88.6
Msa0004790 AT5G41690.2 21.459 466 252 12 33 406 69 512 4.14e-18 88.6
Msa0004790 AT1G54080.2 28.322 286 163 9 111 371 58 326 7.41e-18 87.0
Msa0004790 AT2G15500.1 32.796 186 43 5 267 452 29 132 1.20e-17 80.1
Msa0004790 AT3G19350.1 51.389 72 35 0 575 646 23 94 1.03e-16 76.6
Msa0004790 AT2G37220.1 28.191 188 107 3 34 194 93 279 1.11e-15 78.6
Msa0004790 AT2G37220.1 25.373 201 127 3 117 294 88 288 6.66e-13 70.1
Msa0004790 AT2G44710.4 22.300 287 200 7 5 280 102 376 9.63e-15 78.6
Msa0004790 AT2G44710.2 22.300 287 200 7 5 280 187 461 1.36e-14 78.2
Msa0004790 AT2G44710.1 22.300 287 200 7 5 280 187 461 1.36e-14 78.2
Msa0004790 AT3G52150.2 32.919 161 102 4 213 371 78 234 2.03e-14 74.3
Msa0004790 AT3G52150.2 28.421 190 117 5 111 286 69 253 8.12e-14 72.4
Msa0004790 AT3G52150.2 26.590 173 113 3 34 192 78 250 3.43e-13 70.5
Msa0004790 AT3G52150.1 32.919 161 102 4 213 371 78 234 2.03e-14 74.3
Msa0004790 AT3G52150.1 28.421 190 117 5 111 286 69 253 8.12e-14 72.4
Msa0004790 AT3G52150.1 26.590 173 113 3 34 192 78 250 3.43e-13 70.5
Msa0004790 AT3G52380.1 24.855 173 114 3 34 190 118 290 4.39e-14 74.3
Msa0004790 AT3G52380.1 29.570 186 115 5 122 294 118 300 7.60e-14 73.6
Msa0004790 AT4G16280.3 28.662 157 105 3 31 182 119 273 6.06e-14 75.5
Msa0004790 AT4G00830.2 27.077 325 183 16 96 410 95 375 7.83e-14 75.1
Msa0004790 AT4G00830.2 24.542 273 184 7 32 295 116 375 9.51e-12 68.2
Msa0004790 AT4G00830.1 27.077 325 183 16 96 410 95 375 7.83e-14 75.1
Msa0004790 AT4G00830.1 24.542 273 184 7 32 295 116 375 9.51e-12 68.2
Msa0004790 AT4G00830.6 27.077 325 183 16 96 410 95 375 7.83e-14 75.1
Msa0004790 AT4G00830.6 24.542 273 184 7 32 295 116 375 9.51e-12 68.2
Msa0004790 AT4G16280.4 28.662 157 105 3 31 182 44 198 1.05e-13 75.1
Msa0004790 AT4G16280.2 28.662 157 105 3 31 182 119 273 1.23e-13 74.7
Msa0004790 AT1G01080.1 26.702 191 125 5 115 291 103 292 1.23e-13 72.4
Msa0004790 AT1G01080.2 26.562 192 125 5 115 291 103 293 1.32e-13 72.4
Msa0004790 AT5G50250.1 27.528 178 123 4 120 292 113 289 3.21e-13 71.2
Msa0004790 AT5G50250.1 26.946 167 113 3 34 192 115 280 1.03e-11 66.6
Msa0004790 AT3G13224.3 28.824 170 117 3 122 289 12 179 3.37e-13 72.0
Msa0004790 AT3G13224.3 25.786 159 95 4 213 366 12 152 2.16e-11 66.2
Msa0004790 AT3G13224.3 22.222 162 119 3 34 190 12 171 8.84e-11 64.7
Msa0004790 AT3G13224.2 28.488 172 119 3 120 289 19 188 3.88e-13 72.0
Msa0004790 AT3G13224.2 25.786 159 95 4 213 366 21 161 2.46e-11 66.2
Msa0004790 AT4G00830.3 27.160 324 176 16 96 410 95 367 8.24e-13 71.6
Msa0004790 AT4G00830.3 24.164 269 182 7 32 295 116 367 4.38e-11 66.2
Msa0004790 AT4G00830.5 27.160 324 176 16 96 410 95 367 8.24e-13 71.6
Msa0004790 AT4G00830.5 24.164 269 182 7 32 295 116 367 4.38e-11 66.2
Msa0004790 AT1G47490.2 27.485 171 114 5 33 193 102 272 1.12e-12 69.7
Msa0004790 AT1G47490.2 27.957 186 127 6 122 300 103 288 1.31e-12 69.7
Msa0004790 AT1G60000.1 24.719 178 129 2 20 192 73 250 1.16e-12 68.9
Msa0004790 AT2G16940.5 27.381 168 104 3 33 184 42 207 2.11e-12 70.1
Msa0004790 AT2G16940.4 27.381 168 104 3 33 184 42 207 2.11e-12 70.1
Msa0004790 AT1G47500.2 26.901 171 115 5 33 193 104 274 3.08e-12 68.6
Msa0004790 AT2G16940.1 27.381 168 104 3 33 184 183 348 5.19e-12 69.3
Msa0004790 AT2G16940.2 27.381 168 104 3 33 184 232 397 7.19e-12 68.9
Msa0004790 AT1G01080.3 27.168 173 111 5 115 273 103 274 8.81e-12 67.0
Msa0004790 AT2G35410.1 26.108 203 116 4 213 407 97 273 1.12e-11 67.0
Msa0004790 AT1G17640.2 26.601 203 138 6 109 302 55 255 1.45e-11 67.0
Msa0004790 AT1G17640.1 26.601 203 138 6 109 302 55 255 1.45e-11 67.0
Msa0004790 AT1G17640.3 26.601 203 138 6 109 302 55 255 1.45e-11 67.0
Msa0004790 AT4G24770.1 26.946 167 113 3 34 192 152 317 2.99e-11 65.9
Msa0004790 AT4G24770.1 26.404 178 125 4 117 289 147 323 6.86e-11 64.7
Msa0004790 AT4G24770.2 26.946 167 113 3 34 192 152 317 2.99e-11 65.9
Msa0004790 AT4G24770.2 26.404 178 125 4 117 289 147 323 6.86e-11 64.7
Msa0004790 AT3G13224.1 30.345 145 97 3 120 262 19 161 3.05e-11 64.3
Msa0004790 AT3G13224.1 25.786 159 95 4 213 366 21 161 7.15e-11 63.2
Msa0004790 AT4G14300.1 30.000 170 109 7 213 377 8 172 3.87e-11 66.2
Msa0004790 AT4G14300.2 30.000 170 109 7 213 377 8 172 3.87e-11 66.2
Msa0004790 AT3G52660.3 20.635 252 186 4 32 277 92 335 4.24e-11 66.2
Msa0004790 AT3G52660.1 20.635 252 186 4 32 277 92 335 4.24e-11 66.2
Msa0004790 AT3G52660.2 20.635 252 186 4 32 277 92 335 4.24e-11 66.2
Msa0004790 AT4G26650.2 27.184 206 117 8 206 398 7 192 4.84e-11 65.9
Msa0004790 AT4G26650.1 27.184 206 117 8 206 398 10 195 5.05e-11 65.9
Msa0004790 AT5G55550.5 27.895 190 119 5 213 398 8 183 9.56e-11 65.1
Msa0004790 AT5G55550.4 27.895 190 119 5 213 398 8 183 9.56e-11 65.1
Msa0004790 AT5G55550.9 27.895 190 119 5 213 398 8 183 9.56e-11 65.1
Msa0004790 AT5G55550.7 27.895 190 119 5 213 398 8 183 9.56e-11 65.1
Msa0004790 AT5G55550.1 27.895 190 119 5 213 398 8 183 9.56e-11 65.1

Find 187 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTACCAACAATTGGATTTA+TGG 0.118422 1_1:-7252725 Msa0004790:three_prime_UTR
CTTACAGTCCTCTGCTGTTC+AGG 0.204464 1_1:+7253276 None:intergenic
CTCTGAACAACAAATCTATT+AGG 0.219365 1_1:-7257164 Msa0004790:CDS
AATGCAATTGATAAGTTAAA+TGG 0.241081 1_1:-7256065 Msa0004790:CDS
AGTTTCAATGGCGCAGATTC+AGG 0.270119 1_1:-7257576 Msa0004790:exon
TAATAAATGCAGGCTGGATT+TGG 0.270901 1_1:-7253731 Msa0004790:intron
CACTAAAACTGTTAATTAAA+AGG 0.277798 1_1:+7252661 None:intergenic
ACTCGTCGTTCGCTTGGTTA+TGG 0.285708 1_1:-7257365 Msa0004790:CDS
GATCCTCTGCTGACACCATT+TGG 0.296178 1_1:+7255438 None:intergenic
TAAGGTTACCGGCATGCTTC+TGG 0.306768 1_1:-7253081 Msa0004790:CDS
TATCAGCAGCAGCTTGTTCC+TGG 0.324866 1_1:-7253707 Msa0004790:CDS
TCGGTTGTTTATTTCACTCT+TGG 0.326107 1_1:-7252697 Msa0004790:three_prime_UTR
AAGGAAATGTTCTCTGAGTT+TGG 0.327154 1_1:-7255594 Msa0004790:CDS
CTCTTGTATGGTTAGATGCT+TGG 0.332525 1_1:-7253152 Msa0004790:intron
TTATTCAGCGGCTAGGGCTT+TGG 0.337471 1_1:-7257205 Msa0004790:intron
CAGAATCCTCAGCCTCAAAT+TGG 0.340771 1_1:+7256093 None:intergenic
GGTTAGGGTTTGTAGGGATT+TGG 0.342224 1_1:-7257390 Msa0004790:CDS
CAGACCTGCTGCTGCATCAT+TGG 0.343150 1_1:+7253563 None:intergenic
TCTGAACAACAAATCTATTA+GGG 0.353328 1_1:-7257163 Msa0004790:CDS
ATCCTCTGCTGACACCATTT+GGG 0.353883 1_1:+7255439 None:intergenic
GATGGTAGGTCGAAATGTTT+TGG 0.354440 1_1:-7255849 Msa0004790:CDS
TGGTTTCGGTTAGGGTTTGT+AGG 0.361667 1_1:-7257397 Msa0004790:CDS
CTTCCGTAAATGACTCTGAT+AGG 0.368207 1_1:+7255937 None:intergenic
GCTTTAGGATTACCAACAAT+TGG 0.368775 1_1:-7252733 Msa0004790:three_prime_UTR
CTCTACCCTCCTGGTACTCC+TGG 0.376806 1_1:-7254131 Msa0004790:CDS
CTTTGTTCCAATGGTTCAGC+AGG 0.383917 1_1:-7253651 Msa0004790:CDS
TGGACAAGTGGTTTCGGTTA+GGG 0.384091 1_1:-7257405 Msa0004790:CDS
AGGAGGGTAGAGTGGCATTC+GGG 0.388711 1_1:+7254142 None:intergenic
ACCCATGCCCATTCATGCTT+TGG 0.389513 1_1:-7253322 Msa0004790:CDS
TTTAGTTTGATAATGTTTGT+TGG 0.394362 1_1:-7252816 Msa0004790:three_prime_UTR
TCAATCAAATGCAATACTTC+AGG 0.395049 1_1:+7253047 None:intergenic
TTGGACAAGTGGTTTCGGTT+AGG 0.396239 1_1:-7257406 Msa0004790:CDS
AAACCTATCAGAGTCATTTA+CGG 0.396873 1_1:-7255940 Msa0004790:CDS
GCATCATTGGCACTTGCTGT+GGG 0.397308 1_1:+7253576 None:intergenic
CCAAAGCCCATAACAAAACT+AGG 0.398671 1_1:-7257846 None:intergenic
AAAATGAATTTGGAGCTTAT+GGG 0.402355 1_1:-7255905 Msa0004790:CDS
ACTTGTGGAGGCATCATAGC+TGG 0.406997 1_1:+7254074 None:intergenic
TACGATCACTTTAATCAAGT+TGG 0.414109 1_1:-7257425 Msa0004790:CDS
TCAAGTTGGACAAGTGGTTT+CGG 0.415703 1_1:-7257411 Msa0004790:CDS
AACCCGCCGGTGATCGGAAC+GGG 0.416161 1_1:+7257705 None:intergenic
TGCTGTAGCCAAAGCATGAA+TGG 0.417507 1_1:+7253314 None:intergenic
TTGGCTACTCGTCGTTCGCT+TGG 0.419741 1_1:-7257371 Msa0004790:CDS
CACCAGGGCGCTGACCTTGT+TGG 0.423565 1_1:+7253627 None:intergenic
TGTTGGCCCTGCTGAACCAT+TGG 0.424438 1_1:+7253644 None:intergenic
ACTTTAGCCTTGAGAGCATC+TGG 0.424674 1_1:+7253020 None:intergenic
CAGGAGGGTAGAGTGGCATT+CGG 0.428140 1_1:+7254141 None:intergenic
AATGGTGTCAGCAGAGGATC+TGG 0.430305 1_1:-7255435 Msa0004790:CDS
GATTCAGCAGCTAAGGTTAC+CGG 0.435182 1_1:-7253092 Msa0004790:CDS
TGCATCATTGGCACTTGCTG+TGG 0.436359 1_1:+7253575 None:intergenic
TGGCAAACCTCCCATGTCAT+AGG 0.438185 1_1:+7253362 None:intergenic
AGATAGAAGAGCAAGATTGC+AGG 0.438389 1_1:-7255213 Msa0004790:intron
TTGTTGTTTATTCAGCGGCT+AGG 0.443885 1_1:-7257212 Msa0004790:intron
CTTGGACAACAATTTATGTA+TGG 0.445463 1_1:-7254107 Msa0004790:CDS
GGACCTCCTCGGCGTCCACC+AGG 0.449158 1_1:+7253611 None:intergenic
ACAGAAGGTGTAATTGCAAC+AGG 0.450131 1_1:+7254170 None:intergenic
GTGCCGCTCTTGCGACTACT+AGG 0.451348 1_1:+7257120 None:intergenic
CGTGTTTATCGCTACCCTCC+TGG 0.451898 1_1:-7253438 Msa0004790:CDS
GGTGGACGCCGAGGAGGTCC+TGG 0.452687 1_1:-7253608 Msa0004790:CDS
GCCAAGCTACTTTGTTCCAA+TGG 0.453307 1_1:-7253660 Msa0004790:CDS
CTTGTTCCTGGGATGAGACC+TGG 0.460712 1_1:-7253695 Msa0004790:CDS
CCGTTTGAAGGTGCTGGAAT+CGG 0.466182 1_1:+7257533 None:intergenic
CCTCCTGGTACTCCTGGTCT+TGG 0.467154 1_1:-7254125 Msa0004790:CDS
AATTGGATTTATGGATCTAT+CGG 0.467335 1_1:-7252716 Msa0004790:three_prime_UTR
TGGATAAACCCGCCGGTGAT+CGG 0.467982 1_1:+7257699 None:intergenic
AATGACAAGCAGGTGTTTGT+GGG 0.470614 1_1:-7256032 Msa0004790:CDS
ACAGCTCTTGATGCTTCCTC+TGG 0.471511 1_1:+7255393 None:intergenic
AGATCCATAAATCCAATTGT+TGG 0.475065 1_1:+7252721 None:intergenic
GGTTTCGGTTAGGGTTTGTA+GGG 0.477071 1_1:-7257396 Msa0004790:CDS
TCTGGTCAGTCTAAAGGCTA+TGG 0.478122 1_1:-7256122 Msa0004790:CDS
TACCGGCATGCTTCTGGAGA+TGG 0.481524 1_1:-7253075 Msa0004790:CDS
ATCATTGGCACTTGCTGTGG+GGG 0.483844 1_1:+7253578 None:intergenic
GATAATGTTTGTTGGCATCA+AGG 0.484931 1_1:-7252808 Msa0004790:three_prime_UTR
TGTTAATTTCACTAACCCTC+AGG 0.485000 1_1:-7257339 Msa0004790:CDS
CAATGACAAGCAGGTGTTTG+TGG 0.487408 1_1:-7256033 Msa0004790:CDS
GAAACGACGCTGCCGTTTGA+AGG 0.492756 1_1:+7257521 None:intergenic
GATTTGTGAAGAAGTTTCAA+TGG 0.495102 1_1:-7257588 Msa0004790:exon
CTTGTGGAGGCATCATAGCT+GGG 0.501490 1_1:+7254075 None:intergenic
TGTTGTTTATTCAGCGGCTA+GGG 0.503322 1_1:-7257211 Msa0004790:intron
TAGCGATAAACACGTTGCCT+TGG 0.505854 1_1:+7253447 None:intergenic
TGTCCAAGACCAGGAGTACC+AGG 0.506114 1_1:+7254122 None:intergenic
TTACAGTCCTCTGCTGTTCA+GGG 0.507255 1_1:+7253277 None:intergenic
GATGGTTCTGGTCAGTCTAA+AGG 0.507826 1_1:-7256128 Msa0004790:CDS
CATCAAAACAGCACTAGTAA+TGG 0.509723 1_1:+7255881 None:intergenic
AAAATAGCAACTGATGGTTC+TGG 0.512739 1_1:-7256140 Msa0004790:CDS
CAGATTATGCGAGACCCAAA+TGG 0.514056 1_1:-7255453 Msa0004790:CDS
AGTGCCAATGATGCAGCAGC+AGG 0.515523 1_1:-7253567 Msa0004790:intron
TCTTGAATGTTGCTGCGACC+AGG 0.516671 1_1:+7253420 None:intergenic
GGCATTCGGGGCGCAACAGA+AGG 0.519691 1_1:+7254155 None:intergenic
TGGCACAATTACTTCGTACA+AGG 0.519922 1_1:-7255574 Msa0004790:intron
GAAGGTGCTGGAATCGGTGC+CGG 0.524445 1_1:+7257539 None:intergenic
CTAATAGATTTGTTGTTCAG+AGG 0.526125 1_1:+7257165 None:intergenic
GGCCAACAAGGTCAGCGCCC+TGG 0.527805 1_1:-7253629 Msa0004790:CDS
GTTGTTGACCAGGACCTCCT+CGG 0.528383 1_1:+7253600 None:intergenic
TTGCAGCTTGGAGAGATGAA+TGG 0.529066 1_1:-7255287 Msa0004790:CDS
TCTGTAGTAGACAAATTTCA+AGG 0.530372 1_1:-7255669 Msa0004790:CDS
GGCTAAAGTTGCTGAAGCCA+TGG 0.530907 1_1:-7253006 Msa0004790:CDS
GTATATAAACGAAACGAAAG+TGG 0.532897 1_1:+7257819 None:intergenic
ATGCGATGTTACTTGCAGCT+TGG 0.533529 1_1:-7255299 Msa0004790:CDS
ACGCTGCCGTTTGAAGGTGC+TGG 0.534574 1_1:+7257527 None:intergenic
GGGGTATAGAAATGATGGTG+TGG 0.536243 1_1:+7252877 None:intergenic
GTATCCGCTAGTAGATCAGC+TGG 0.539041 1_1:-7253120 Msa0004790:CDS
GCTGTAGCCAAAGCATGAAT+GGG 0.539748 1_1:+7253315 None:intergenic
CATCATTGGCACTTGCTGTG+GGG 0.539865 1_1:+7253577 None:intergenic
TTCCCGTTCCGATCACCGGC+GGG 0.540872 1_1:-7257707 Msa0004790:five_prime_UTR
AGTGAGGCTAGTTGATCCGC+CGG 0.541519 1_1:+7252945 None:intergenic
TGAGTCACCAGATGCTCTCA+AGG 0.542342 1_1:-7253027 Msa0004790:CDS
ACTATTCCCGTTCCGATCAC+CGG 0.546514 1_1:-7257711 Msa0004790:five_prime_UTR
AAGGTTTGAGCAGACTGTAA+AGG 0.546711 1_1:-7255694 Msa0004790:CDS
GGAACATGATTCAGCAGCTA+AGG 0.546851 1_1:-7253099 Msa0004790:CDS
ATCAGCAGCAGCTTGTTCCT+GGG 0.547574 1_1:-7253706 Msa0004790:CDS
CCGATTCCAGCACCTTCAAA+CGG 0.550647 1_1:-7257533 Msa0004790:CDS
CGCCCTGGTGGACGCCGAGG+AGG 0.553565 1_1:-7253614 Msa0004790:CDS
AACATTTCTCAAAACCTCCA+TGG 0.553981 1_1:+7252989 None:intergenic
AAGGCTGCACTGCACCGCAA+TGG 0.556229 1_1:+7257779 None:intergenic
ACCATTGGAACAAAGTAGCT+TGG 0.559188 1_1:+7253659 None:intergenic
ACATTATCAAACTAAAAGAC+CGG 0.560523 1_1:+7252823 None:intergenic
GACCTCCTCGGCGTCCACCA+GGG 0.561701 1_1:+7253612 None:intergenic
GTCCATCTCCAGAAGCATGC+CGG 0.562964 1_1:+7253073 None:intergenic
TGTTGCTGTTGCACAGCGAA+AGG 0.568244 1_1:-7255237 Msa0004790:CDS
CTTTAATCAAGTTGGACAAG+TGG 0.569030 1_1:-7257417 Msa0004790:CDS
CGAATGCCACTCTACCCTCC+TGG 0.569240 1_1:-7254140 Msa0004790:CDS
CAAAGCCCATAACAAAACTA+GGG 0.573750 1_1:-7257845 None:intergenic
GACGTCGTAACGAACTGATT+CGG 0.574989 1_1:+7257494 None:intergenic
TATGATAATCATACTTGTGG+AGG 0.575760 1_1:+7254062 None:intergenic
ACAGTCCTCTGCTGTTCAGG+GGG 0.577307 1_1:+7253279 None:intergenic
GATGACAAGGAGTGGTATGT+TGG 0.578166 1_1:-7255759 Msa0004790:CDS
GGAGTACCAGGAGGGTAGAG+TGG 0.578299 1_1:+7254134 None:intergenic
AGATGCTGCTAAAGCTGTTG+AGG 0.579437 1_1:-7255802 Msa0004790:CDS
GCCCCTGTGCAAAACATTGG+TGG 0.580664 1_1:-7253396 Msa0004790:CDS
GTATGGTTAGATGCTTGGAG+AGG 0.583459 1_1:-7253147 Msa0004790:intron
ATGGTTCAGCAGGGCCAACA+AGG 0.583994 1_1:-7253641 Msa0004790:CDS
CCTGGGATGAGACCTGGTGG+TGG 0.588301 1_1:-7253689 Msa0004790:CDS
GGAACAAAGTAGCTTGGCAT+AGG 0.588556 1_1:+7253665 None:intergenic
AGCCAAAGCATGAATGGGCA+TGG 0.590578 1_1:+7253320 None:intergenic
AATTTCACTAACCCTCAGGA+TGG 0.592051 1_1:-7257335 Msa0004790:intron
GTTACGACGTCGTTGTACGT+TGG 0.592079 1_1:-7257482 Msa0004790:CDS
AACGAAACTAACCATCCTGA+GGG 0.595204 1_1:+7257324 None:intergenic
CCACCACCAGGTCTCATCCC+AGG 0.598755 1_1:+7253689 None:intergenic
ATTCCCGTTCCGATCACCGG+CGG 0.601369 1_1:-7257708 Msa0004790:five_prime_UTR
TCAAATGCAATACTTCAGGC+TGG 0.601392 1_1:+7253051 None:intergenic
CAACAATTTATGTATGGCCA+AGG 0.601992 1_1:-7254101 Msa0004790:CDS
TCTTGCAAAATAGCAACTGA+TGG 0.602362 1_1:-7256146 Msa0004790:CDS
AAAGCTGTTGAGGCATTGAA+TGG 0.605011 1_1:-7255792 Msa0004790:CDS
TACAGTCCTCTGCTGTTCAG+GGG 0.607977 1_1:+7253278 None:intergenic
GAACGTGAGCAAGAGCTGAA+AGG 0.610322 1_1:-7255717 Msa0004790:CDS
AAACCCGCCGGTGATCGGAA+CGG 0.610598 1_1:+7257704 None:intergenic
TTGTGGAGGCATCATAGCTG+GGG 0.612919 1_1:+7254076 None:intergenic
AAAGCATGAATGGGCATGGG+TGG 0.613260 1_1:+7253324 None:intergenic
GTGAGCAAGAGCTGAAAGGA+AGG 0.614410 1_1:-7255713 Msa0004790:CDS
AGAAATGTTACTCAACAGCA+AGG 0.614788 1_1:-7252975 Msa0004790:CDS
TGAATGTTGCTGCGACCAGG+AGG 0.615427 1_1:+7253423 None:intergenic
CAGCGCCCTGGTGGACGCCG+AGG 0.618945 1_1:-7253617 Msa0004790:CDS
GACCCAAATGGTGTCAGCAG+AGG 0.620312 1_1:-7255441 Msa0004790:CDS
AGAGTCGTTGAGAGAGAGTG+AGG 0.620798 1_1:+7252929 None:intergenic
TGATGAGAGATGCTGATGGT+AGG 0.623806 1_1:-7255863 Msa0004790:CDS
GGAGGGTAGAGTGGCATTCG+GGG 0.625817 1_1:+7254143 None:intergenic
TTTGTTCCAATGGTTCAGCA+GGG 0.626797 1_1:-7253650 Msa0004790:CDS
GTGAGGCTAGTTGATCCGCC+GGG 0.627783 1_1:+7252946 None:intergenic
TGTGGAGGCATCATAGCTGG+GGG 0.627960 1_1:+7254077 None:intergenic
AATGCTGATCAATGACAAGC+AGG 0.628720 1_1:-7256042 Msa0004790:CDS
TATCTCTATCTTGCTTACGT+AGG 0.631591 1_1:+7256003 None:intergenic
AGGAATGATGTCCTATGACA+TGG 0.633264 1_1:-7253373 Msa0004790:CDS
GATGCCCCTGTGCAAAACAT+TGG 0.633837 1_1:-7253399 Msa0004790:CDS
GCCAAAGCATGAATGGGCAT+GGG 0.635175 1_1:+7253321 None:intergenic
ATAAATTGTTGTCCAAGACC+AGG 0.638542 1_1:+7254113 None:intergenic
TCAGGTTCAGCATCAAACTC+CGG 0.642673 1_1:-7257558 Msa0004790:CDS
TCAACAGCAAGGAAACAGCC+CGG 0.646568 1_1:-7252964 Msa0004790:CDS
CAACGAAACTAACCATCCTG+AGG 0.649245 1_1:+7257323 None:intergenic
CCTGTGCAAAACATTGGTGG+AGG 0.654336 1_1:-7253393 Msa0004790:CDS
GTTCCTGGGATGAGACCTGG+TGG 0.655055 1_1:-7253692 Msa0004790:CDS
TGTGCAACAGCAACATAGAG+AGG 0.660072 1_1:+7255245 None:intergenic
GATCCTAGTAGTCGCAAGAG+CGG 0.660494 1_1:-7257123 Msa0004790:CDS
GGAATGATGTCCTATGACAT+GGG 0.661604 1_1:-7253372 Msa0004790:CDS
CTTGGCATAGGACCACCACC+AGG 0.662106 1_1:+7253677 None:intergenic
GAATGTTGCTGCGACCAGGA+GGG 0.664998 1_1:+7253424 None:intergenic
TAAAGTTGCTGAAGCCATGG+AGG 0.667343 1_1:-7253003 Msa0004790:CDS
CAAGACCAGGAGTACCAGGA+GGG 0.671251 1_1:+7254126 None:intergenic
TGGTGTGGAATTCATGTAGA+CGG 0.672470 1_1:+7252892 None:intergenic
GGTGGTACAACATCACGAAG+TGG 0.685790 1_1:+7253342 None:intergenic
CGGAACGGGAATAGTATCAG+CGG 0.687230 1_1:+7257719 None:intergenic
TGTTCCAGCTGATCTACTAG+CGG 0.690170 1_1:+7253116 None:intergenic
AAAACACGTAAGCACCATTG+CGG 0.698048 1_1:-7257793 Msa0004790:five_prime_UTR
GTTGTACGTTGGTGATCTTG+AGG 0.704303 1_1:-7257471 Msa0004790:CDS
CAACAAGGTCAGCGCCCTGG+TGG 0.709951 1_1:-7253626 Msa0004790:CDS
ATGATGTCCTATGACATGGG+AGG 0.725560 1_1:-7253369 Msa0004790:CDS
CCAAGACCAGGAGTACCAGG+AGG 0.726994 1_1:+7254125 None:intergenic
ACAGCAAGGAAACAGCCCGG+CGG 0.789531 1_1:-7252961 Msa0004790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAGAAATAAGAAAAAAA+GGG + chr1_1:7256132-7256151 None:intergenic 10.0%
!! ATATAAGAAATAAGAAAAAA+AGG + chr1_1:7256133-7256152 None:intergenic 10.0%
!!! TTTTTTTCTTATTTCTTATA+TGG - chr1_1:7256132-7256151 Msa0004790:CDS 10.0%
!! AAAAAAAAAAAAAAAAAAGG+GGG + chr1_1:7257572-7257591 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAAAAG+GGG + chr1_1:7257573-7257592 None:intergenic 10.0%
!! GCAAAAAAAAAAAAAAAAAA+GGG + chr1_1:7257574-7257593 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTTGC+CGG - chr1_1:7257574-7257593 Msa0004790:exon 10.0%
!!! AAAAGTTTCAGTTTTTTTTT+TGG + chr1_1:7252747-7252766 None:intergenic 15.0%
!!! ATTTTATATGTTTTGTGATT+AGG - chr1_1:7253139-7253158 Msa0004790:CDS 15.0%
!!! TTTTATATGTTTTGTGATTA+GGG - chr1_1:7253140-7253159 Msa0004790:CDS 15.0%
!! ATTATGAATATTTATCACAT+TGG - chr1_1:7253425-7253444 Msa0004790:CDS 15.0%
!!! ATGGGTTAAAAAAATTTAAT+TGG + chr1_1:7254936-7254955 None:intergenic 15.0%
!! ATAAGAAATAAGAAAAAAAG+GGG + chr1_1:7256131-7256150 None:intergenic 15.0%
!!! TGATAAATTTTGAACTAAAT+TGG + chr1_1:7256652-7256671 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAAGGG+GGG + chr1_1:7257571-7257590 None:intergenic 15.0%
!! GGCAAAAAAAAAAAAAAAAA+AGG + chr1_1:7257575-7257594 None:intergenic 15.0%
!!! CTGAAATTTTTTTGGTTTTT+GGG + chr1_1:7252672-7252691 None:intergenic 20.0%
!!! ACTGAAATTTTTTTGGTTTT+TGG + chr1_1:7252673-7252692 None:intergenic 20.0%
!!! TCAGTTTTTTTTTTGGATTT+TGG + chr1_1:7252740-7252759 None:intergenic 20.0%
!!! ACACTAAATTGATAGTATAT+TGG + chr1_1:7253528-7253547 None:intergenic 20.0%
!!! ACTATCAATTTAGTGTTTTA+AGG - chr1_1:7253532-7253551 Msa0004790:intron 20.0%
!!! GCTTATAATTGTTTTGTATA+TGG - chr1_1:7253720-7253739 Msa0004790:CDS 20.0%
!!! AATTGTTTTGTATATGGTAT+AGG - chr1_1:7253726-7253745 Msa0004790:intron 20.0%
!!! ATGAAAATAAGTTGAGTTTA+TGG - chr1_1:7253778-7253797 Msa0004790:intron 20.0%
!!! GAATTTATGAAAATAGCTTT+TGG + chr1_1:7253872-7253891 None:intergenic 20.0%
!! TATATCCATAGTTTAATCAA+TGG - chr1_1:7253951-7253970 Msa0004790:intron 20.0%
!! AATGCAATTGATAAGTTAAA+TGG - chr1_1:7254351-7254370 Msa0004790:intron 20.0%
!!! TTTCATGTTTAAGTTAATCA+AGG + chr1_1:7255420-7255439 None:intergenic 20.0%
!! CACAATTATCATACAATATA+TGG + chr1_1:7255476-7255495 None:intergenic 20.0%
!!! TTCAAGAATCTTTTTTTCAT+TGG - chr1_1:7255502-7255521 Msa0004790:intron 20.0%
!!! TCAAGAATCTTTTTTTCATT+GGG - chr1_1:7255503-7255522 Msa0004790:intron 20.0%
!! AAATATGATAATCATACTTG+TGG + chr1_1:7256360-7256379 None:intergenic 20.0%
!! AAAAAAAAAAAAAAAAGGGG+GGG + chr1_1:7257570-7257589 None:intergenic 20.0%
!!! TTTAGTTTGATAATGTTTGT+TGG - chr1_1:7257600-7257619 Msa0004790:five_prime_UTR 20.0%
!! CACTAAAACTGTTAATTAAA+AGG + chr1_1:7257758-7257777 None:intergenic 20.0%
!!! AATTTTTTTGGTTTTTGGGA+GGG + chr1_1:7252668-7252687 None:intergenic 25.0%
!!! AAATTTTTTTGGTTTTTGGG+AGG + chr1_1:7252669-7252688 None:intergenic 25.0%
!!! TTTTTTTGCAGAACTGATTA+GGG - chr1_1:7252763-7252782 Msa0004790:three_prime_UTR 25.0%
!!! TTTTGTTGTTGTTTATTCAG+CGG - chr1_1:7253199-7253218 Msa0004790:intron 25.0%
! TCTGAACAACAAATCTATTA+GGG - chr1_1:7253253-7253272 Msa0004790:intron 25.0%
!!! CACTGCTAATATTTTTATCA+AGG - chr1_1:7253316-7253335 Msa0004790:CDS 25.0%
!!! GCATTTTTTATCTCTTATCT+TGG - chr1_1:7253340-7253359 Msa0004790:CDS 25.0%
! CTTATCTTGGTAGAATTTAT+AGG - chr1_1:7253353-7253372 Msa0004790:CDS 25.0%
!! ATGTAAAATTTGTTTGTAGC+AGG - chr1_1:7253575-7253594 Msa0004790:CDS 25.0%
!! TGTAAAATTTGTTTGTAGCA+GGG - chr1_1:7253576-7253595 Msa0004790:CDS 25.0%
! CTCAGATGTTTATTTCAAAA+AGG + chr1_1:7253603-7253622 None:intergenic 25.0%
! TTTGCCTATTTGACTAATAA+AGG - chr1_1:7253630-7253649 Msa0004790:CDS 25.0%
!!! GTTGTTTTTAGAAGCTATAT+TGG - chr1_1:7253748-7253767 Msa0004790:intron 25.0%
!!! GTTGTTTTTTGAAGCTATAT+TGG - chr1_1:7253806-7253825 Msa0004790:intron 25.0%
!! CAATTCCATTGATTAAACTA+TGG + chr1_1:7253959-7253978 None:intergenic 25.0%
! CATAGTTTAATCAATGGAAT+TGG - chr1_1:7253957-7253976 Msa0004790:intron 25.0%
!!! ATTGGTTTTTATGATGTTGT+TGG - chr1_1:7254173-7254192 Msa0004790:CDS 25.0%
! GATGACTTGAAAAATGAATT+TGG - chr1_1:7254501-7254520 Msa0004790:intron 25.0%
!! AAAAATGAATTTGGAGCTTA+TGG - chr1_1:7254510-7254529 Msa0004790:intron 25.0%
!! AAAATGAATTTGGAGCTTAT+GGG - chr1_1:7254511-7254530 Msa0004790:intron 25.0%
! AAAAAAAGATTCTTGAAGCT+AGG + chr1_1:7255499-7255518 None:intergenic 25.0%
! TTTGTTGCCAAATTAAAGAT+AGG - chr1_1:7255781-7255800 Msa0004790:CDS 25.0%
!! TTTTCCGAGTTAAATAACAT+TGG - chr1_1:7256040-7256059 Msa0004790:CDS 25.0%
!! CAAACCAATGTTATTTAACT+CGG + chr1_1:7256047-7256066 None:intergenic 25.0%
! AACAAAATAACAGCTGAATA+TGG + chr1_1:7256389-7256408 None:intergenic 25.0%
! AAAACAAAGTCAAAATGAAC+AGG + chr1_1:7256482-7256501 None:intergenic 25.0%
!!! TTTTGACTTTGTTTTACTTG+TGG - chr1_1:7256487-7256506 Msa0004790:intron 25.0%
!!! TTTGACTTTGTTTTACTTGT+GGG - chr1_1:7256488-7256507 Msa0004790:intron 25.0%
! CAAAACATGTTATATGTGAA+GGG + chr1_1:7256563-7256582 None:intergenic 25.0%
! ATCACTTCAATAATAAATGC+AGG - chr1_1:7256675-7256694 Msa0004790:intron 25.0%
! TATACTCATCTTTCATATTG+AGG - chr1_1:7256909-7256928 Msa0004790:intron 25.0%
!! TGCTAATATTTCTGCAAATT+TGG - chr1_1:7257174-7257193 Msa0004790:CDS 25.0%
!! GCTAATATTTCTGCAAATTT+GGG - chr1_1:7257175-7257194 Msa0004790:CDS 25.0%
! ACAAGAGAAAATATCAGTAA+AGG + chr1_1:7257251-7257270 None:intergenic 25.0%
!! TACTGATATTTTCTCTTGTA+TGG - chr1_1:7257252-7257271 Msa0004790:intron 25.0%
! AAAAAAAAAAAAAAAGGGGG+GGG + chr1_1:7257569-7257588 None:intergenic 25.0%
! ACATTATCAAACTAAAAGAC+CGG + chr1_1:7257596-7257615 None:intergenic 25.0%
!!! TTTTTATTTGGTCATGCTTT+AGG - chr1_1:7257668-7257687 Msa0004790:five_prime_UTR 25.0%
! ATTACCAACAATTGGATTTA+TGG - chr1_1:7257691-7257710 Msa0004790:five_prime_UTR 25.0%
! AATTGGATTTATGGATCTAT+CGG - chr1_1:7257700-7257719 Msa0004790:five_prime_UTR 25.0%
GTATATAAACGAAACGAAAG+TGG + chr1_1:7252600-7252619 None:intergenic 30.0%
!!! CGGAGAAACTGAAATTTTTT+TGG + chr1_1:7252680-7252699 None:intergenic 30.0%
!!! CTTTTTTTGCAGAACTGATT+AGG - chr1_1:7252762-7252781 Msa0004790:three_prime_UTR 30.0%
GATTTGTGAAGAAGTTTCAA+TGG - chr1_1:7252828-7252847 Msa0004790:three_prime_UTR 30.0%
TACGATCACTTTAATCAAGT+TGG - chr1_1:7252991-7253010 Msa0004790:CDS 30.0%
! ATGTTTTGTGATTAGGGTTT+TGG - chr1_1:7253146-7253165 Msa0004790:intron 30.0%
!! CTAATAGATTTGTTGTTCAG+AGG + chr1_1:7253254-7253273 None:intergenic 30.0%
CTCTGAACAACAAATCTATT+AGG - chr1_1:7253252-7253271 Msa0004790:intron 30.0%
AATTTATAGGCAGTTTAGTC+AGG - chr1_1:7253366-7253385 Msa0004790:CDS 30.0%
ATTTATAGGCAGTTTAGTCA+GGG - chr1_1:7253367-7253386 Msa0004790:CDS 30.0%
!! ATAATCTCCTGTATCGATTT+CGG + chr1_1:7253410-7253429 None:intergenic 30.0%
ACGATAAGTCGTTAAAAGTA+GGG + chr1_1:7253452-7253471 None:intergenic 30.0%
TCAGCCTTTATTAGTCAAAT+AGG + chr1_1:7253637-7253656 None:intergenic 30.0%
CATAAATTTAGCGACTGTTT+GGG + chr1_1:7253896-7253915 None:intergenic 30.0%
ACATAAATTTAGCGACTGTT+TGG + chr1_1:7253897-7253916 None:intergenic 30.0%
AGTCGCTAAATTTATGTCAA+TGG - chr1_1:7253900-7253919 Msa0004790:intron 30.0%
CTTAAATAAGCCAATCAAAC+AGG - chr1_1:7253928-7253947 Msa0004790:intron 30.0%
TATGGATATACCTGTTTGAT+TGG + chr1_1:7253941-7253960 None:intergenic 30.0%
! AATGGAATTGGAATTAGTCT+TGG - chr1_1:7253969-7253988 Msa0004790:intron 30.0%
ACAAGACATATACAACTAAG+TGG + chr1_1:7254054-7254073 None:intergenic 30.0%
CTTGATTTATGTGAGTAGTT+TGG - chr1_1:7254106-7254125 Msa0004790:CDS 30.0%
CAACATCATAAAAACCAATC+AGG + chr1_1:7254172-7254191 None:intergenic 30.0%
!!! CATGACACTTTTTCTTCTTT+CGG - chr1_1:7254237-7254256 Msa0004790:intron 30.0%
AAACCTATCAGAGTCATTTA+CGG - chr1_1:7254476-7254495 Msa0004790:intron 30.0%
!! TGGTAAAAAAGTTGATGACA+AGG - chr1_1:7254644-7254663 Msa0004790:intron 30.0%
TCTGTAGTAGACAAATTTCA+AGG - chr1_1:7254747-7254766 Msa0004790:intron 30.0%
GAACTTGTATCTCAAAAACT+TGG - chr1_1:7254773-7254792 Msa0004790:intron 30.0%
! CTTGAGTTTTTCATCAGTAA+TGG + chr1_1:7254805-7254824 None:intergenic 30.0%
CATTACTGATGAAAAACTCA+AGG - chr1_1:7254803-7254822 Msa0004790:intron 30.0%
!! CTTTTAACTGATATCTGTGT+CGG - chr1_1:7254879-7254898 Msa0004790:intron 30.0%
! AGCTGTAAGTCTAAAACTAT+TGG - chr1_1:7255040-7255059 Msa0004790:intron 30.0%
! TGTAAGTCTAAAACTATTGG+TGG - chr1_1:7255043-7255062 Msa0004790:intron 30.0%
TACAAGAAACTTTGTAAGAG+AGG - chr1_1:7255292-7255311 Msa0004790:CDS 30.0%
ACAAGAAACTTTGTAAGAGA+GGG - chr1_1:7255293-7255312 Msa0004790:CDS 30.0%
AAATTAAAGATAGGAGTGGT+GGG - chr1_1:7255790-7255809 Msa0004790:CDS 30.0%
ACTATATAGAGTAAGGGAAA+TGG + chr1_1:7256107-7256126 None:intergenic 30.0%
TATGGTCTATGATATGTTTG+CGG - chr1_1:7256150-7256169 Msa0004790:CDS 30.0%
CTTAATTACTTTCTTCATGC+AGG - chr1_1:7256203-7256222 Msa0004790:CDS 30.0%
CTTGGACAACAATTTATGTA+TGG - chr1_1:7256309-7256328 Msa0004790:intron 30.0%
TATGATAATCATACTTGTGG+AGG + chr1_1:7256357-7256376 None:intergenic 30.0%
! AGTTTTGCATCAGTATAACA+AGG + chr1_1:7256514-7256533 None:intergenic 30.0%
TTATACTGATGCAAAACTGT+GGG - chr1_1:7256516-7256535 Msa0004790:intron 30.0%
GCAAAACATGTTATATGTGA+AGG + chr1_1:7256564-7256583 None:intergenic 30.0%
CAGAAATATTAGCAGCAAAA+AGG + chr1_1:7257168-7257187 None:intergenic 30.0%
TCAATCAAATGCAATACTTC+AGG + chr1_1:7257372-7257391 None:intergenic 30.0%
AAAAAAAAAAAAAAGGGGGG+GGG + chr1_1:7257568-7257587 None:intergenic 30.0%
AGATCCATAAATCCAATTGT+TGG + chr1_1:7257698-7257717 None:intergenic 30.0%
!!! AATGGTGCTTACGTGTTTTT+TGG + chr1_1:7252622-7252641 None:intergenic 35.0%
!! CTTTAATCAAGTTGGACAAG+TGG - chr1_1:7252999-7253018 Msa0004790:CDS 35.0%
TGTTAATTTCACTAACCCTC+AGG - chr1_1:7253077-7253096 Msa0004790:CDS 35.0%
!! TTAGGGTTTTGGTGAAATTG+TGG - chr1_1:7253157-7253176 Msa0004790:intron 35.0%
GACGATAAGTCGTTAAAAGT+AGG + chr1_1:7253453-7253472 None:intergenic 35.0%
TTAACGACTTATCGTCAAGT+AGG - chr1_1:7253457-7253476 Msa0004790:intron 35.0%
!! GACTAATAAAGGCTGATTTG+AGG - chr1_1:7253641-7253660 Msa0004790:CDS 35.0%
TCAATTGAACTGAACCTGAT+TGG - chr1_1:7254155-7254174 Msa0004790:CDS 35.0%
TCTTGCAAAATAGCAACTGA+TGG - chr1_1:7254270-7254289 Msa0004790:intron 35.0%
AAAATAGCAACTGATGGTTC+TGG - chr1_1:7254276-7254295 Msa0004790:intron 35.0%
!!! CTATGGTTTTGTCCAATTTG+AGG - chr1_1:7254311-7254330 Msa0004790:intron 35.0%
TATCTCTATCTTGCTTACGT+AGG + chr1_1:7254416-7254435 None:intergenic 35.0%
CATCAAAACAGCACTAGTAA+TGG + chr1_1:7254538-7254557 None:intergenic 35.0%
!! AAAAAGTTGATGACAAGGAG+TGG - chr1_1:7254649-7254668 Msa0004790:intron 35.0%
AAGGAAATGTTCTCTGAGTT+TGG - chr1_1:7254822-7254841 Msa0004790:intron 35.0%
!!! TTTTTTAATGCTGCAGACGT+TGG - chr1_1:7254910-7254929 Msa0004790:intron 35.0%
CGCATAATCTGCAGTATTAT+GGG + chr1_1:7254954-7254973 None:intergenic 35.0%
TCGCATAATCTGCAGTATTA+TGG + chr1_1:7254955-7254974 None:intergenic 35.0%
!!! CAGAAACCTCTCGTTTTTTA+TGG - chr1_1:7255380-7255399 Msa0004790:intron 35.0%
TGCAAACCATAAAAAACGAG+AGG + chr1_1:7255389-7255408 None:intergenic 35.0%
AGACATTCTCACAGTATACA+AGG + chr1_1:7255564-7255583 None:intergenic 35.0%
TGCCAAATTAAAGATAGGAG+TGG - chr1_1:7255786-7255805 Msa0004790:CDS 35.0%
CACCACTCCTATCTTTAATT+TGG + chr1_1:7255791-7255810 None:intergenic 35.0%
CAAATTAAAGATAGGAGTGG+TGG - chr1_1:7255789-7255808 Msa0004790:CDS 35.0%
! TTTGACTTTGACTAACGTCT+TGG - chr1_1:7255996-7256015 Msa0004790:CDS 35.0%
AAAACTCATCAACTCAGTTG+GGG + chr1_1:7256024-7256043 None:intergenic 35.0%
GAAAACTCATCAACTCAGTT+GGG + chr1_1:7256025-7256044 None:intergenic 35.0%
! AGGCACAATTTTCACAAATG+AGG - chr1_1:7256223-7256242 Msa0004790:intron 35.0%
ATAAATTGTTGTCCAAGACC+AGG + chr1_1:7256306-7256325 None:intergenic 35.0%
CAACAATTTATGTATGGCCA+AGG - chr1_1:7256315-7256334 Msa0004790:intron 35.0%
AAATAACAGCTGAATATGGC+AGG + chr1_1:7256385-7256404 None:intergenic 35.0%
GTTATACTGATGCAAAACTG+TGG - chr1_1:7256515-7256534 Msa0004790:intron 35.0%
CTTCAATAATAAATGCAGGC+TGG - chr1_1:7256679-7256698 Msa0004790:intron 35.0%
TAATAAATGCAGGCTGGATT+TGG - chr1_1:7256685-7256704 Msa0004790:intron 35.0%
!! TTTCATATTGAGGTACTGAC+AGG - chr1_1:7256919-7256938 Msa0004790:intron 35.0%
!! TTCATATTGAGGTACTGACA+GGG - chr1_1:7256920-7256939 Msa0004790:intron 35.0%
TTTCTGCTCTATGATTGTTG+TGG - chr1_1:7257218-7257237 Msa0004790:intron 35.0%
AACATTTCTCAAAACCTCCA+TGG + chr1_1:7257430-7257449 None:intergenic 35.0%
AGAAATGTTACTCAACAGCA+AGG - chr1_1:7257441-7257460 Msa0004790:CDS 35.0%
AAAAAAAAAAAAAGGGGGGG+GGG + chr1_1:7257567-7257586 None:intergenic 35.0%
! GATAATGTTTGTTGGCATCA+AGG - chr1_1:7257608-7257627 Msa0004790:five_prime_UTR 35.0%
!! GCTTTAGGATTACCAACAAT+TGG - chr1_1:7257683-7257702 Msa0004790:five_prime_UTR 35.0%
TCGGTTGTTTATTTCACTCT+TGG - chr1_1:7257719-7257738 Msa0004790:five_prime_UTR 35.0%
AAAACACGTAAGCACCATTG+CGG - chr1_1:7252623-7252642 Msa0004790:three_prime_UTR 40.0%
!! TCAAGTTGGACAAGTGGTTT+CGG - chr1_1:7253005-7253024 Msa0004790:CDS 40.0%
AATTTCACTAACCCTCAGGA+TGG - chr1_1:7253081-7253100 Msa0004790:CDS 40.0%
AACGAAACTAACCATCCTGA+GGG + chr1_1:7253095-7253114 None:intergenic 40.0%
!! TTGTTGTTTATTCAGCGGCT+AGG - chr1_1:7253204-7253223 Msa0004790:intron 40.0%
! TGTTGTTTATTCAGCGGCTA+GGG - chr1_1:7253205-7253224 Msa0004790:intron 40.0%
TTTGTCTCCGAAATCGATAC+AGG - chr1_1:7253400-7253419 Msa0004790:CDS 40.0%
TCCACTGAAGAACTAGATAG+TGG - chr1_1:7254008-7254027 Msa0004790:intron 40.0%
CCACTGAAGAACTAGATAGT+GGG - chr1_1:7254009-7254028 Msa0004790:intron 40.0%
! GTTGTTGGTTGTGCAGAATT+TGG - chr1_1:7254188-7254207 Msa0004790:CDS 40.0%
!! TTTTGTCCAATTTGAGGCTG+AGG - chr1_1:7254317-7254336 Msa0004790:intron 40.0%
AATGCTGATCAATGACAAGC+AGG - chr1_1:7254374-7254393 Msa0004790:intron 40.0%
AATGACAAGCAGGTGTTTGT+GGG - chr1_1:7254384-7254403 Msa0004790:intron 40.0%
CTTCCGTAAATGACTCTGAT+AGG + chr1_1:7254482-7254501 None:intergenic 40.0%
!! GTTTTGATGAGAGATGCTGA+TGG - chr1_1:7254549-7254568 Msa0004790:intron 40.0%
! GATGGTAGGTCGAAATGTTT+TGG - chr1_1:7254567-7254586 Msa0004790:intron 40.0%
!! AAAGCTGTTGAGGCATTGAA+TGG - chr1_1:7254624-7254643 Msa0004790:intron 40.0%
AAGGTTTGAGCAGACTGTAA+AGG - chr1_1:7254722-7254741 Msa0004790:intron 40.0%
TGGCACAATTACTTCGTACA+AGG - chr1_1:7254842-7254861 Msa0004790:intron 40.0%
! TGTTGCATTTTCAACTCCAG+AGG - chr1_1:7255007-7255026 Msa0004790:intron 40.0%
AGATAGAAGAGCAAGATTGC+AGG - chr1_1:7255203-7255222 Msa0004790:intron 40.0%
AAACTTTGTAAGAGAGGGTC+TGG - chr1_1:7255298-7255317 Msa0004790:CDS 40.0%
!! CCAATTTTGGTGGGAAAGTT+TGG + chr1_1:7255604-7255623 None:intergenic 40.0%
CCAAACTTTCCCACCAAAAT+TGG - chr1_1:7255601-7255620 Msa0004790:CDS 40.0%
AGTCGAATTTGGACCTTGAA+AGG - chr1_1:7255634-7255653 Msa0004790:CDS 40.0%
!! CTTATTTTCCCTTGCAAGTG+AGG - chr1_1:7255722-7255741 Msa0004790:CDS 40.0%
GGAAAACTCATCAACTCAGT+TGG + chr1_1:7256026-7256045 None:intergenic 40.0%
!! AGGGGCACTATATAGAGTAA+GGG + chr1_1:7256113-7256132 None:intergenic 40.0%
!! AAGGGGCACTATATAGAGTA+AGG + chr1_1:7256114-7256133 None:intergenic 40.0%
GTCTATGATATGTTTGCGGA+GGG - chr1_1:7256154-7256173 Msa0004790:CDS 40.0%
! ACAGAAGGTGTAATTGCAAC+AGG + chr1_1:7256249-7256268 None:intergenic 40.0%
!! ACATGTTTTGCTGTGTATGC+TGG - chr1_1:7256573-7256592 Msa0004790:intron 40.0%
ACCATTGGAACAAAGTAGCT+TGG + chr1_1:7256760-7256779 None:intergenic 40.0%
TTTGTTCCAATGGTTCAGCA+GGG - chr1_1:7256766-7256785 Msa0004790:intron 40.0%
! TTTTTGCTCAGATGCTTCCA+AGG - chr1_1:7256952-7256971 Msa0004790:intron 40.0%
AGGAATGATGTCCTATGACA+TGG - chr1_1:7257043-7257062 Msa0004790:intron 40.0%
GGAATGATGTCCTATGACAT+GGG - chr1_1:7257044-7257063 Msa0004790:intron 40.0%
! TGGGTTCAGTTCTCATGTTT+TGG - chr1_1:7257194-7257213 Msa0004790:CDS 40.0%
CTCTTGTATGGTTAGATGCT+TGG - chr1_1:7257264-7257283 Msa0004790:intron 40.0%
TCAAATGCAATACTTCAGGC+TGG + chr1_1:7257368-7257387 None:intergenic 40.0%
TGGTGTGGAATTCATGTAGA+CGG + chr1_1:7257527-7257546 None:intergenic 40.0%
AAAAAAAAAAAAGGGGGGGG+GGG + chr1_1:7257566-7257585 None:intergenic 40.0%
! TGGATTTTGGATAAACCCGC+CGG + chr1_1:7252727-7252746 None:intergenic 45.0%
AGTTTCAATGGCGCAGATTC+AGG - chr1_1:7252840-7252859 Msa0004790:three_prime_UTR 45.0%
TCAGGTTCAGCATCAAACTC+CGG - chr1_1:7252858-7252877 Msa0004790:three_prime_UTR 45.0%
GACGTCGTAACGAACTGATT+CGG + chr1_1:7252925-7252944 None:intergenic 45.0%
!! GTTGTACGTTGGTGATCTTG+AGG - chr1_1:7252945-7252964 Msa0004790:CDS 45.0%
TTGGACAAGTGGTTTCGGTT+AGG - chr1_1:7253010-7253029 Msa0004790:CDS 45.0%
TGGACAAGTGGTTTCGGTTA+GGG - chr1_1:7253011-7253030 Msa0004790:CDS 45.0%
TGGTTTCGGTTAGGGTTTGT+AGG - chr1_1:7253019-7253038 Msa0004790:CDS 45.0%
GGTTTCGGTTAGGGTTTGTA+GGG - chr1_1:7253020-7253039 Msa0004790:CDS 45.0%
GGTTAGGGTTTGTAGGGATT+TGG - chr1_1:7253026-7253045 Msa0004790:CDS 45.0%
CAACGAAACTAACCATCCTG+AGG + chr1_1:7253096-7253115 None:intergenic 45.0%
!! AGGCTGATTTGAGGTCTGTT+TGG - chr1_1:7253650-7253669 Msa0004790:CDS 45.0%
!! CCCACTATCTAGTTCTTCAG+TGG + chr1_1:7254012-7254031 None:intergenic 45.0%
!! GATGGTTCTGGTCAGTCTAA+AGG - chr1_1:7254288-7254307 Msa0004790:intron 45.0%
TCTGGTCAGTCTAAAGGCTA+TGG - chr1_1:7254294-7254313 Msa0004790:intron 45.0%
CAGAATCCTCAGCCTCAAAT+TGG + chr1_1:7254326-7254345 None:intergenic 45.0%
CAATGACAAGCAGGTGTTTG+TGG - chr1_1:7254383-7254402 Msa0004790:intron 45.0%
TGATGAGAGATGCTGATGGT+AGG - chr1_1:7254553-7254572 Msa0004790:intron 45.0%
AGATGCTGCTAAAGCTGTTG+AGG - chr1_1:7254614-7254633 Msa0004790:intron 45.0%
GATGACAAGGAGTGGTATGT+TGG - chr1_1:7254657-7254676 Msa0004790:intron 45.0%
CAGATTATGCGAGACCCAAA+TGG - chr1_1:7254963-7254982 Msa0004790:intron 45.0%
ATCCTCTGCTGACACCATTT+GGG + chr1_1:7254980-7254999 None:intergenic 45.0%
! ATGCGATGTTACTTGCAGCT+TGG - chr1_1:7255117-7255136 Msa0004790:intron 45.0%
TTGCAGCTTGGAGAGATGAA+TGG - chr1_1:7255129-7255148 Msa0004790:intron 45.0%
TGTGCAACAGCAACATAGAG+AGG + chr1_1:7255174-7255193 None:intergenic 45.0%
TTTCCCACCAAAATTGGCAC+CGG - chr1_1:7255607-7255626 Msa0004790:CDS 45.0%
AGTCTCACAGTATGCAAACC+CGG + chr1_1:7255704-7255723 None:intergenic 45.0%
GGTCTATGATATGTTTGCGG+AGG - chr1_1:7256153-7256172 Msa0004790:CDS 45.0%
GTTTGCGGAGGGTTATTTGT+AGG - chr1_1:7256165-7256184 Msa0004790:CDS 45.0%
GGAACAAAGTAGCTTGGCAT+AGG + chr1_1:7256754-7256773 None:intergenic 45.0%
! GCCAAGCTACTTTGTTCCAA+TGG - chr1_1:7256756-7256775 Msa0004790:intron 45.0%
CTTTGTTCCAATGGTTCAGC+AGG - chr1_1:7256765-7256784 Msa0004790:intron 45.0%
TAGCGATAAACACGTTGCCT+TGG + chr1_1:7256972-7256991 None:intergenic 45.0%
! TCCACCAATGTTTTGCACAG+GGG + chr1_1:7257024-7257043 None:intergenic 45.0%
! CTCCACCAATGTTTTGCACA+GGG + chr1_1:7257025-7257044 None:intergenic 45.0%
ATGATGTCCTATGACATGGG+AGG - chr1_1:7257047-7257066 Msa0004790:intron 45.0%
GCTGTAGCCAAAGCATGAAT+GGG + chr1_1:7257104-7257123 None:intergenic 45.0%
TGCTGTAGCCAAAGCATGAA+TGG + chr1_1:7257105-7257124 None:intergenic 45.0%
TTACAGTCCTCTGCTGTTCA+GGG + chr1_1:7257142-7257161 None:intergenic 45.0%
GTATGGTTAGATGCTTGGAG+AGG - chr1_1:7257269-7257288 Msa0004790:intron 45.0%
TGTTCCAGCTGATCTACTAG+CGG + chr1_1:7257303-7257322 None:intergenic 45.0%
GGAACATGATTCAGCAGCTA+AGG - chr1_1:7257317-7257336 Msa0004790:intron 45.0%
GATTCAGCAGCTAAGGTTAC+CGG - chr1_1:7257324-7257343 Msa0004790:intron 45.0%
!! ACTTTAGCCTTGAGAGCATC+TGG + chr1_1:7257399-7257418 None:intergenic 45.0%
TAAAGTTGCTGAAGCCATGG+AGG - chr1_1:7257413-7257432 Msa0004790:CDS 45.0%
! GGGGTATAGAAATGATGGTG+TGG + chr1_1:7257542-7257561 None:intergenic 45.0%
AAAAAAAAAAAGGGGGGGGG+GGG + chr1_1:7257565-7257584 None:intergenic 45.0%
!!! GTTTTTATTTATTTTTTATT+TGG - chr1_1:7257656-7257675 Msa0004790:five_prime_UTR 5.0%
CGGAACGGGAATAGTATCAG+CGG + chr1_1:7252700-7252719 None:intergenic 50.0%
ACTATTCCCGTTCCGATCAC+CGG - chr1_1:7252705-7252724 Msa0004790:three_prime_UTR 50.0%
!! CCGTTTGAAGGTGCTGGAAT+CGG + chr1_1:7252886-7252905 None:intergenic 50.0%
CCGATTCCAGCACCTTCAAA+CGG - chr1_1:7252883-7252902 Msa0004790:three_prime_UTR 50.0%
GTTACGACGTCGTTGTACGT+TGG - chr1_1:7252934-7252953 Msa0004790:CDS 50.0%
ACTCGTCGTTCGCTTGGTTA+TGG - chr1_1:7253051-7253070 Msa0004790:CDS 50.0%
TTATTCAGCGGCTAGGGCTT+TGG - chr1_1:7253211-7253230 Msa0004790:intron 50.0%
GATCCTAGTAGTCGCAAGAG+CGG - chr1_1:7253293-7253312 Msa0004790:CDS 50.0%
GAACGTGAGCAAGAGCTGAA+AGG - chr1_1:7254699-7254718 Msa0004790:intron 50.0%
GTGAGCAAGAGCTGAAAGGA+AGG - chr1_1:7254703-7254722 Msa0004790:intron 50.0%
GATCCTCTGCTGACACCATT+TGG + chr1_1:7254981-7255000 None:intergenic 50.0%
! AATGGTGTCAGCAGAGGATC+TGG - chr1_1:7254981-7255000 Msa0004790:intron 50.0%
ACAGCTCTTGATGCTTCCTC+TGG + chr1_1:7255026-7255045 None:intergenic 50.0%
! TGTTGCTGTTGCACAGCGAA+AGG - chr1_1:7255179-7255198 Msa0004790:intron 50.0%
TGTCGTTGTGTCCCTCTTGT+TGG - chr1_1:7255530-7255549 Msa0004790:intron 50.0%
TTCCCACCAAAATTGGCACC+GGG - chr1_1:7255608-7255627 Msa0004790:CDS 50.0%
CTTGGAGTGTGCTCCTTTCA+AGG + chr1_1:7255650-7255669 None:intergenic 50.0%
CACAGTATGCAAACCCGGTT+GGG + chr1_1:7255699-7255718 None:intergenic 50.0%
TCACAGTATGCAAACCCGGT+TGG + chr1_1:7255700-7255719 None:intergenic 50.0%
TTCGAACGCCTCACTTGCAA+GGG + chr1_1:7255733-7255752 None:intergenic 50.0%
!! TTGTGGAGGCATCATAGCTG+GGG + chr1_1:7256343-7256362 None:intergenic 50.0%
!! CTTGTGGAGGCATCATAGCT+GGG + chr1_1:7256344-7256363 None:intergenic 50.0%
!! ACTTGTGGAGGCATCATAGC+TGG + chr1_1:7256345-7256364 None:intergenic 50.0%
! TATCAGCAGCAGCTTGTTCC+TGG - chr1_1:7256709-7256728 Msa0004790:intron 50.0%
! ATCAGCAGCAGCTTGTTCCT+GGG - chr1_1:7256710-7256729 Msa0004790:intron 50.0%
!! ATCATTGGCACTTGCTGTGG+GGG + chr1_1:7256841-7256860 None:intergenic 50.0%
!! CATCATTGGCACTTGCTGTG+GGG + chr1_1:7256842-7256861 None:intergenic 50.0%
!! GCATCATTGGCACTTGCTGT+GGG + chr1_1:7256843-7256862 None:intergenic 50.0%
! TGCATCATTGGCACTTGCTG+TGG + chr1_1:7256844-7256863 None:intergenic 50.0%
TCTTGAATGTTGCTGCGACC+AGG + chr1_1:7256999-7257018 None:intergenic 50.0%
GATGCCCCTGTGCAAAACAT+TGG - chr1_1:7257017-7257036 Msa0004790:intron 50.0%
! CCTCCACCAATGTTTTGCAC+AGG + chr1_1:7257026-7257045 None:intergenic 50.0%
CCTGTGCAAAACATTGGTGG+AGG - chr1_1:7257023-7257042 Msa0004790:intron 50.0%
TGGCAAACCTCCCATGTCAT+AGG + chr1_1:7257057-7257076 None:intergenic 50.0%
GGTGGTACAACATCACGAAG+TGG + chr1_1:7257077-7257096 None:intergenic 50.0%
AAAGCATGAATGGGCATGGG+TGG + chr1_1:7257095-7257114 None:intergenic 50.0%
ACCCATGCCCATTCATGCTT+TGG - chr1_1:7257094-7257113 Msa0004790:intron 50.0%
GCCAAAGCATGAATGGGCAT+GGG + chr1_1:7257098-7257117 None:intergenic 50.0%
AGCCAAAGCATGAATGGGCA+TGG + chr1_1:7257099-7257118 None:intergenic 50.0%
TACAGTCCTCTGCTGTTCAG+GGG + chr1_1:7257141-7257160 None:intergenic 50.0%
CTTACAGTCCTCTGCTGTTC+AGG + chr1_1:7257143-7257162 None:intergenic 50.0%
GTATCCGCTAGTAGATCAGC+TGG - chr1_1:7257296-7257315 Msa0004790:intron 50.0%
TAAGGTTACCGGCATGCTTC+TGG - chr1_1:7257335-7257354 Msa0004790:intron 50.0%
TGAGTCACCAGATGCTCTCA+AGG - chr1_1:7257389-7257408 Msa0004790:CDS 50.0%
GGCTAAAGTTGCTGAAGCCA+TGG - chr1_1:7257410-7257429 Msa0004790:CDS 50.0%
TCAACAGCAAGGAAACAGCC+CGG - chr1_1:7257452-7257471 Msa0004790:CDS 50.0%
AGAGTCGTTGAGAGAGAGTG+AGG + chr1_1:7257490-7257509 None:intergenic 50.0%
AAAAAAAAAAGGGGGGGGGG+GGG + chr1_1:7257564-7257583 None:intergenic 50.0%
!! GGTTTTTGGGAGGGCAGAGA+AGG + chr1_1:7252659-7252678 None:intergenic 55.0%
TGGATAAACCCGCCGGTGAT+CGG + chr1_1:7252720-7252739 None:intergenic 55.0%
! GAAACGACGCTGCCGTTTGA+AGG + chr1_1:7252898-7252917 None:intergenic 55.0%
TTGGCTACTCGTCGTTCGCT+TGG - chr1_1:7253045-7253064 Msa0004790:CDS 55.0%
! GACCCAAATGGTGTCAGCAG+AGG - chr1_1:7254975-7254994 Msa0004790:intron 55.0%
CGTTGTGTCCCTCTTGTTGG+TGG - chr1_1:7255533-7255552 Msa0004790:intron 55.0%
! TGTGTCCCTCTTGTTGGTGG+AGG - chr1_1:7255536-7255555 Msa0004790:intron 55.0%
AGGTGCCTCCACCAACAAGA+GGG + chr1_1:7255544-7255563 None:intergenic 55.0%
! AAGGTGCCTCCACCAACAAG+AGG + chr1_1:7255545-7255564 None:intergenic 55.0%
TCCCACCAAAATTGGCACCG+GGG - chr1_1:7255609-7255628 Msa0004790:CDS 55.0%
!! TCCCCGGTGCCAATTTTGGT+GGG + chr1_1:7255613-7255632 None:intergenic 55.0%
!! ACTCTCCCCGGTGCCAATTT+TGG + chr1_1:7255617-7255636 None:intergenic 55.0%
GGTCCAAATTCGACTCTCCC+CGG + chr1_1:7255629-7255648 None:intergenic 55.0%
CTTCGAACGCCTCACTTGCA+AGG + chr1_1:7255734-7255753 None:intergenic 55.0%
! TGAGGCGTTCGAAGTATGCG+AGG - chr1_1:7255740-7255759 Msa0004790:CDS 55.0%
AGGAGGGTAGAGTGGCATTC+GGG + chr1_1:7256277-7256296 None:intergenic 55.0%
CAGGAGGGTAGAGTGGCATT+CGG + chr1_1:7256278-7256297 None:intergenic 55.0%
!! CAAGACCAGGAGTACCAGGA+GGG + chr1_1:7256293-7256312 None:intergenic 55.0%
!! TGTCCAAGACCAGGAGTACC+AGG + chr1_1:7256297-7256316 None:intergenic 55.0%
!! TGTGGAGGCATCATAGCTGG+GGG + chr1_1:7256342-7256361 None:intergenic 55.0%
CTTGTTCCTGGGATGAGACC+TGG - chr1_1:7256721-7256740 Msa0004790:intron 55.0%
TGTTGGCCCTGCTGAACCAT+TGG + chr1_1:7256775-7256794 None:intergenic 55.0%
ATGGTTCAGCAGGGCCAACA+AGG - chr1_1:7256775-7256794 Msa0004790:intron 55.0%
GTTGTTGACCAGGACCTCCT+CGG + chr1_1:7256819-7256838 None:intergenic 55.0%
AGTGCCAATGATGCAGCAGC+AGG - chr1_1:7256849-7256868 Msa0004790:intron 55.0%
CAGACCTGCTGCTGCATCAT+TGG + chr1_1:7256856-7256875 None:intergenic 55.0%
CGTGTTTATCGCTACCCTCC+TGG - chr1_1:7256978-7256997 Msa0004790:intron 55.0%
GAATGTTGCTGCGACCAGGA+GGG + chr1_1:7256995-7257014 None:intergenic 55.0%
TGAATGTTGCTGCGACCAGG+AGG + chr1_1:7256996-7257015 None:intergenic 55.0%
GCCCCTGTGCAAAACATTGG+TGG - chr1_1:7257020-7257039 Msa0004790:intron 55.0%
ACAGTCCTCTGCTGTTCAGG+GGG + chr1_1:7257140-7257159 None:intergenic 55.0%
! TACCGGCATGCTTCTGGAGA+TGG - chr1_1:7257341-7257360 Msa0004790:CDS 55.0%
! GTCCATCTCCAGAAGCATGC+CGG + chr1_1:7257346-7257365 None:intergenic 55.0%
! AGTGAGGCTAGTTGATCCGC+CGG + chr1_1:7257474-7257493 None:intergenic 55.0%
! GGGGGGGGGTATAGAAATGA+TGG + chr1_1:7257547-7257566 None:intergenic 55.0%
AAAAAAAAAGGGGGGGGGGG+GGG + chr1_1:7257563-7257582 None:intergenic 55.0%
AAGGCTGCACTGCACCGCAA+TGG + chr1_1:7252640-7252659 None:intergenic 60.0%
ATTCCCGTTCCGATCACCGG+CGG - chr1_1:7252708-7252727 Msa0004790:three_prime_UTR 60.0%
AAACCCGCCGGTGATCGGAA+CGG + chr1_1:7252715-7252734 None:intergenic 60.0%
!! GAAGGTGCTGGAATCGGTGC+CGG + chr1_1:7252880-7252899 None:intergenic 60.0%
! ACGCTGCCGTTTGAAGGTGC+TGG + chr1_1:7252892-7252911 None:intergenic 60.0%
! GTGCCGCTCTTGCGACTACT+AGG + chr1_1:7253299-7253318 None:intergenic 60.0%
!! CTCCCCGGTGCCAATTTTGG+TGG + chr1_1:7255614-7255633 None:intergenic 60.0%
GCACCGGGGAGAGTCGAATT+TGG - chr1_1:7255623-7255642 Msa0004790:CDS 60.0%
!! GAGGTGTTGGCTTGGGAGCT+TGG + chr1_1:7255668-7255687 None:intergenic 60.0%
!! TCGCCTGGAGGTGTTGGCTT+GGG + chr1_1:7255675-7255694 None:intergenic 60.0%
!! TTCGCCTGGAGGTGTTGGCT+TGG + chr1_1:7255676-7255695 None:intergenic 60.0%
! TTGGGTTCGCCTGGAGGTGT+TGG + chr1_1:7255681-7255700 None:intergenic 60.0%
GGAGGGTAGAGTGGCATTCG+GGG + chr1_1:7256276-7256295 None:intergenic 60.0%
CGAATGCCACTCTACCCTCC+TGG - chr1_1:7256276-7256295 Msa0004790:intron 60.0%
! GGAGTACCAGGAGGGTAGAG+TGG + chr1_1:7256285-7256304 None:intergenic 60.0%
CTCTACCCTCCTGGTACTCC+TGG - chr1_1:7256285-7256304 Msa0004790:intron 60.0%
!! CCAAGACCAGGAGTACCAGG+AGG + chr1_1:7256294-7256313 None:intergenic 60.0%
CCTCCTGGTACTCCTGGTCT+TGG - chr1_1:7256291-7256310 Msa0004790:intron 60.0%
GCATCATAGCTGGGGGTCCT+TGG + chr1_1:7256335-7256354 None:intergenic 60.0%
GTTCCTGGGATGAGACCTGG+TGG - chr1_1:7256724-7256743 Msa0004790:intron 60.0%
CTTGGCATAGGACCACCACC+AGG + chr1_1:7256742-7256761 None:intergenic 60.0%
TGCTGTGGGGGTTGTTGACC+AGG + chr1_1:7256829-7256848 None:intergenic 60.0%
ATGCTCCCCCTGAACAGCAG+AGG - chr1_1:7257132-7257151 Msa0004790:CDS 60.0%
ACAGCAAGGAAACAGCCCGG+CGG - chr1_1:7257455-7257474 Msa0004790:CDS 60.0%
! GTGAGGCTAGTTGATCCGCC+GGG + chr1_1:7257473-7257492 None:intergenic 60.0%
AAAAAAAAGGGGGGGGGGGG+GGG + chr1_1:7257562-7257581 None:intergenic 60.0%
TTCCCGTTCCGATCACCGGC+GGG - chr1_1:7252709-7252728 Msa0004790:three_prime_UTR 65.0%
AACCCGCCGGTGATCGGAAC+GGG + chr1_1:7252714-7252733 None:intergenic 65.0%
GCTCCCAAGCCAACACCTCC+AGG - chr1_1:7255669-7255688 Msa0004790:CDS 65.0%
CACCTCCAGGCGAACCCAAC+CGG - chr1_1:7255682-7255701 Msa0004790:CDS 65.0%
ACCTCCAGGCGAACCCAACC+GGG - chr1_1:7255683-7255702 Msa0004790:CDS 65.0%
CAAACCCGGTTGGGTTCGCC+TGG + chr1_1:7255690-7255709 None:intergenic 65.0%
GGCATTCGGGGCGCAACAGA+AGG + chr1_1:7256264-7256283 None:intergenic 65.0%
CCACCACCAGGTCTCATCCC+AGG + chr1_1:7256730-7256749 None:intergenic 65.0%
CCTGGGATGAGACCTGGTGG+TGG - chr1_1:7256727-7256746 Msa0004790:intron 65.0%
!! CACCAGGGCGCTGACCTTGT+TGG + chr1_1:7256792-7256811 None:intergenic 65.0%
CAACAAGGTCAGCGCCCTGG+TGG - chr1_1:7256790-7256809 Msa0004790:intron 65.0%
AAAAAAAGGGGGGGGGGGGG+GGG + chr1_1:7257561-7257580 None:intergenic 65.0%
ACCCGGTTGGGTTCGCCTGG+AGG + chr1_1:7255687-7255706 None:intergenic 70.0%
GGCCAACAAGGTCAGCGCCC+TGG - chr1_1:7256787-7256806 Msa0004790:intron 70.0%
GACCTCCTCGGCGTCCACCA+GGG + chr1_1:7256807-7256826 None:intergenic 70.0%
GGACCTCCTCGGCGTCCACC+AGG + chr1_1:7256808-7256827 None:intergenic 75.0%
GGTGGACGCCGAGGAGGTCC+TGG - chr1_1:7256808-7256827 Msa0004790:intron 75.0%
!! CAGCGCCCTGGTGGACGCCG+AGG - chr1_1:7256799-7256818 Msa0004790:intron 80.0%
!! CGCCCTGGTGGACGCCGAGG+AGG - chr1_1:7256802-7256821 Msa0004790:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 7252583 7257855 7252583 ID=Msa0004790;Name=Msa0004790
chr1_1 mRNA 7252583 7257855 7252583 ID=Msa0004790-mRNA-1;Parent=Msa0004790;Name=Msa0004790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=264|0.87|0.88|1|1|1|9|343|662
chr1_1 exon 7252583 7253159 7252583 ID=Msa0004790-mRNA-1:exon:2523;Parent=Msa0004790-mRNA-1
chr1_1 exon 7253281 7253475 7253281 ID=Msa0004790-mRNA-1:exon:2522;Parent=Msa0004790-mRNA-1
chr1_1 exon 7253568 7253741 7253568 ID=Msa0004790-mRNA-1:exon:2521;Parent=Msa0004790-mRNA-1
chr1_1 exon 7254076 7254213 7254076 ID=Msa0004790-mRNA-1:exon:2520;Parent=Msa0004790-mRNA-1
chr1_1 exon 7255214 7255348 7255214 ID=Msa0004790-mRNA-1:exon:2519;Parent=Msa0004790-mRNA-1
chr1_1 exon 7255395 7255472 7255395 ID=Msa0004790-mRNA-1:exon:2518;Parent=Msa0004790-mRNA-1
chr1_1 exon 7255575 7256234 7255575 ID=Msa0004790-mRNA-1:exon:2517;Parent=Msa0004790-mRNA-1
chr1_1 exon 7257101 7257219 7257101 ID=Msa0004790-mRNA-1:exon:2516;Parent=Msa0004790-mRNA-1
chr1_1 exon 7257336 7257855 7257336 ID=Msa0004790-mRNA-1:exon:2515;Parent=Msa0004790-mRNA-1
chr1_1 five_prime_UTR 7257592 7257855 7257592 ID=Msa0004790-mRNA-1:five_prime_utr;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7257336 7257591 7257336 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7257101 7257219 7257101 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7255575 7256234 7255575 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7255395 7255472 7255395 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7255214 7255348 7255214 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7254076 7254213 7254076 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7253568 7253741 7253568 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7253281 7253475 7253281 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 CDS 7252926 7253159 7252926 ID=Msa0004790-mRNA-1:cds;Parent=Msa0004790-mRNA-1
chr1_1 three_prime_UTR 7252583 7252925 7252583 ID=Msa0004790-mRNA-1:three_prime_utr;Parent=Msa0004790-mRNA-1
Gene Sequence

>Msa0004790

ATGGCGCAGATTCAGGTTCAGCATCAAACTCCGGCACCGATTCCAGCACCTTCAAACGGCAGCGTCGTTTCGACACCGAATCAGTTCGTTACGACGTCGTTGTACGTTGGTGATCTTGAGGTGAATGTGAACGATTCTCAGCTTTACGATCACTTTAATCAAGTTGGACAAGTGGTTTCGGTTAGGGTTTGTAGGGATTTGGCTACTCGTCGTTCGCTTGGTTATGGTTATGTTAATTTCACTAACCCTCAGGATGCGGCTAGGGCTTTGGATGTTCTGAATTTTACTCCTCTGAACAACAAATCTATTAGGGTTATGTATTCTCATCGTGATCCTAGTAGTCGCAAGAGCGGCACTGCTAATATTTTTATCAAGAATTTGGATAAGACGATTGATCACAAAGCTTTACATGACACTTTTTCTTCTTTCGGACAAATTATGTCTTGCAAAATAGCAACTGATGGTTCTGGTCAGTCTAAAGGCTATGGTTTTGTCCAATTTGAGGCTGAGGATTCTGCTCAGAATGCAATTGATAAGTTAAATGGAATGCTGATCAATGACAAGCAGGTGTTTGTGGGTCATTTCCTACGTAAGCAAGATAGAGATAACGTTCTCAGTAAGACAAAATTTAACAATGTCTATGTGAAAAACCTATCAGAGTCATTTACGGAAGATGACTTGAAAAATGAATTTGGAGCTTATGGGACCATTACTAGTGCTGTTTTGATGAGAGATGCTGATGGTAGGTCGAAATGTTTTGGATTTGTCAATTTCGAAAATGCAGAAGATGCTGCTAAAGCTGTTGAGGCATTGAATGGTAAAAAAGTTGATGACAAGGAGTGGTATGTTGGTAAAGCTCAGAAAAAATCTGAACGTGAGCAAGAGCTGAAAGGAAGGTTTGAGCAGACTGTAAAGGAGTCTGTAGTAGACAAATTTCAAGGTCTGAACTTGTATCTCAAAAACTTGGATGATTCCATTACTGATGAAAAACTCAAGGAAATGTTCTCTGAGTTTGGCACAATTACTTCGTACAAGATTATGCGAGACCCAAATGGTGTCAGCAGAGGATCTGGCTTTGTTGCATTTTCAACTCCAGAGGAAGCATCAAGAGCTAACTGTAATATAACATTCATATGCAAAATGCGATGTTACTTGCAGCTTGGAGAGATGAATGGCAAAATGATCGTTAGCAAACCTCTCTATGTTGCTGTTGCACAGCGAAAGGAAGATAGAAGAGCAAGATTGCAGGCACAATTTTCACAAATGAGGCCTGTTGCAATTACACCTTCTGTTGCGCCCCGAATGCCACTCTACCCTCCTGGTACTCCTGGTCTTGGACAACAATTTATGTATGGCCAAGGACCCCCAGCTATGATGCCTCCACAAGCTGGATTTGGATATCAGCAGCAGCTTGTTCCTGGGATGAGACCTGGTGGTGGTCCTATGCCAAGCTACTTTGTTCCAATGGTTCAGCAGGGCCAACAAGGTCAGCGCCCTGGTGGACGCCGAGGAGGTCCTGGTCAACAACCCCCACAGCAAGTGCCAATGATGCAGCAGCAGATGCTTCCAAGGCAACGTGTTTATCGCTACCCTCCTGGTCGCAGCAACATTCAAGATGCCCCTGTGCAAAACATTGGTGGAGGAATGATGTCCTATGACATGGGAGGTTTGCCACTTCGTGATGTTGTACCACCCATGCCCATTCATGCTTTGGCTACAGCACTTGCGAATGCTCCCCCTGAACAGCAGAGGACTATGCTTGGAGAGGCTTTGTATCCGCTAGTAGATCAGCTGGAACATGATTCAGCAGCTAAGGTTACCGGCATGCTTCTGGAGATGGACCAGCCTGAAGTATTGCATTTGATTGAGTCACCAGATGCTCTCAAGGCTAAAGTTGCTGAAGCCATGGAGGTTTTGAGAAATGTTACTCAACAGCAAGGAAACAGCCCGGCGGATCAACTAGCCTCACTCTCTCTCAACGACTCTTAG
Protein sequence

>Msa0004790

MAQIQVQHQTPAPIPAPSNGSVVSTPNQFVTTSLYVGDLEVNVNDSQLYDHFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFTPLNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRANCNITFICKMRCYLQLGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMRPVAITPSVAPRMPLYPPGTPGLGQQFMYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSYFVPMVQQGQQGQRPGGRRGGPGQQPPQQVPMMQQQMLPRQRVYRYPPGRSNIQDAPVQNIGGGMMSYDMGGLPLRDVVPPMPIHALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMEVLRNVTQQQGNSPADQLASLSLNDS*