Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289010 | XP_013445813.1 | 90.722 | 97 | 8 | 1 | 37 | 132 | 35 | 131 | 3.94e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289010 | A0A072TQR1 | 90.722 | 97 | 8 | 1 | 37 | 132 | 35 | 131 | 1.88e-54 | 176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa1289010 | -0.814211 | 1.728935e-51 | -8.615850e-47 |
| Msa0011720 | Msa1289010 | 0.807354 | 5.266367e-50 | -8.615850e-47 |
| Msa0012040 | Msa1289010 | 0.807999 | 3.841410e-50 | -8.615850e-47 |
| Msa0013050 | Msa1289010 | -0.809566 | 1.775755e-50 | -8.615850e-47 |
| Msa0014710 | Msa1289010 | 0.804806 | 1.810348e-49 | -8.615850e-47 |
| Msa0014800 | Msa1289010 | 0.828426 | 9.051726e-55 | -8.615850e-47 |
| Msa0039420 | Msa1289010 | -0.827538 | 1.479997e-54 | -8.615850e-47 |
| Msa0044710 | Msa1289010 | 0.807347 | 5.283442e-50 | -8.615850e-47 |
| Msa0050730 | Msa1289010 | 0.811111 | 8.243651e-51 | -8.615850e-47 |
| Msa0050760 | Msa1289010 | 0.819351 | 1.215413e-52 | -8.615850e-47 |
| Msa0054730 | Msa1289010 | -0.804286 | 2.323450e-49 | -8.615850e-47 |
| Msa0060600 | Msa1289010 | 0.811464 | 6.909458e-51 | -8.615850e-47 |
| Msa0063350 | Msa1289010 | -0.811248 | 7.696578e-51 | -8.615850e-47 |
| Msa0072000 | Msa1289010 | 0.802930 | 4.440073e-49 | -8.615850e-47 |
| Msa0090100 | Msa1289010 | 0.809915 | 1.494540e-50 | -8.615850e-47 |
| Msa0092990 | Msa1289010 | 0.834491 | 2.906147e-56 | -8.615850e-47 |
| Msa0096940 | Msa1289010 | -0.806741 | 7.100146e-50 | -8.615850e-47 |
| Msa0105340 | Msa1289010 | 0.823417 | 1.400770e-53 | -8.615850e-47 |
| Msa0106670 | Msa1289010 | 0.809252 | 2.074661e-50 | -8.615850e-47 |
| Msa0120340 | Msa1289010 | 0.847284 | 1.274463e-59 | -8.615850e-47 |
| Msa0607340 | Msa1289010 | -0.811075 | 8.394300e-51 | -8.615850e-47 |
| Msa0608710 | Msa1289010 | 0.828061 | 1.108199e-54 | -8.615850e-47 |
| Msa0610590 | Msa1289010 | 0.817928 | 2.556581e-52 | -8.615850e-47 |
| Msa0620960 | Msa1289010 | 0.800172 | 1.632419e-48 | -8.615850e-47 |
| Msa0621590 | Msa1289010 | 0.804761 | 1.849750e-49 | -8.615850e-47 |
| Msa0626090 | Msa1289010 | 0.806993 | 6.278886e-50 | -8.615850e-47 |
| Msa0628740 | Msa1289010 | 0.804823 | 1.795438e-49 | -8.615850e-47 |
| Msa0638320 | Msa1289010 | 0.805942 | 1.046030e-49 | -8.615850e-47 |
| Msa0643000 | Msa1289010 | -0.801806 | 7.569131e-49 | -8.615850e-47 |
| Msa0647450 | Msa1289010 | -0.842762 | 2.120822e-58 | -8.615850e-47 |
| Msa0651190 | Msa1289010 | 0.808685 | 2.742326e-50 | -8.615850e-47 |
| Msa0651400 | Msa1289010 | 0.812133 | 4.941575e-51 | -8.615850e-47 |
| Msa0661190 | Msa1289010 | -0.824935 | 6.163297e-54 | -8.615850e-47 |
| Msa0662650 | Msa1289010 | 0.839435 | 1.586986e-57 | -8.615850e-47 |
| Msa0666140 | Msa1289010 | 0.801088 | 1.061994e-48 | -8.615850e-47 |
| Msa0669850 | Msa1289010 | 0.804988 | 1.658314e-49 | -8.615850e-47 |
| Msa0670660 | Msa1289010 | 0.804826 | 1.792395e-49 | -8.615850e-47 |
| Msa0672120 | Msa1289010 | 0.807569 | 4.741409e-50 | -8.615850e-47 |
| Msa0694250 | Msa1289010 | 0.806503 | 7.969062e-50 | -8.615850e-47 |
| Msa0700070 | Msa1289010 | 0.803943 | 2.738952e-49 | -8.615850e-47 |
| Msa0708860 | Msa1289010 | 0.838568 | 2.661483e-57 | -8.615850e-47 |
| Msa0714340 | Msa1289010 | 0.810748 | 9.879761e-51 | -8.615850e-47 |
| Msa0714380 | Msa1289010 | 0.807828 | 4.177577e-50 | -8.615850e-47 |
| Msa0714600 | Msa1289010 | 0.800771 | 1.232654e-48 | -8.615850e-47 |
| Msa0743260 | Msa1289010 | 0.843838 | 1.095402e-58 | -8.615850e-47 |
| Msa0756310 | Msa1289010 | 0.828636 | 8.052285e-55 | -8.615850e-47 |
| Msa0771720 | Msa1289010 | 0.820296 | 7.391730e-53 | -8.615850e-47 |
| Msa0775260 | Msa1289010 | 0.819722 | 1.000626e-52 | -8.615850e-47 |
| Msa0777230 | Msa1289010 | 0.842544 | 2.422997e-58 | -8.615850e-47 |
| Msa0789270 | Msa1289010 | 0.810770 | 9.772810e-51 | -8.615850e-47 |
| Msa0789280 | Msa1289010 | 0.806769 | 7.003821e-50 | -8.615850e-47 |
| Msa0789290 | Msa1289010 | 0.802364 | 5.811019e-49 | -8.615850e-47 |
| Msa0790390 | Msa1289010 | -0.814025 | 1.900726e-51 | -8.615850e-47 |
| Msa0794510 | Msa1289010 | -0.815273 | 1.005900e-51 | -8.615850e-47 |
| Msa0835730 | Msa1289010 | 0.844597 | 6.851911e-59 | -8.615850e-47 |
| Msa0137570 | Msa1289010 | 0.802040 | 6.773120e-49 | -8.615850e-47 |
| Msa0144970 | Msa1289010 | -0.806017 | 1.009090e-49 | -8.615850e-47 |
| Msa0148120 | Msa1289010 | 0.822474 | 2.323140e-53 | -8.615850e-47 |
| Msa0152170 | Msa1289010 | 0.800438 | 1.440921e-48 | -8.615850e-47 |
| Msa0156650 | Msa1289010 | -0.805119 | 1.556710e-49 | -8.615850e-47 |
| Msa0162770 | Msa1289010 | -0.821866 | 3.214221e-53 | -8.615850e-47 |
| Msa0188630 | Msa1289010 | 0.830172 | 3.410753e-55 | -8.615850e-47 |
| Msa0188680 | Msa1289010 | -0.812103 | 5.016892e-51 | -8.615850e-47 |
| Msa0197940 | Msa1289010 | -0.807379 | 5.202374e-50 | -8.615850e-47 |
| Msa0208630 | Msa1289010 | 0.822207 | 2.680457e-53 | -8.615850e-47 |
| Msa0223290 | Msa1289010 | 0.812593 | 3.921443e-51 | -8.615850e-47 |
| Msa0223380 | Msa1289010 | 0.827373 | 1.621190e-54 | -8.615850e-47 |
| Msa0223410 | Msa1289010 | -0.827847 | 1.247778e-54 | -8.615850e-47 |
| Msa0226890 | Msa1289010 | 0.807393 | 5.166354e-50 | -8.615850e-47 |
| Msa0236630 | Msa1289010 | 0.817784 | 2.755633e-52 | -8.615850e-47 |
| Msa0236980 | Msa1289010 | 0.800571 | 1.354063e-48 | -8.615850e-47 |
| Msa1225150 | Msa1289010 | -0.814880 | 1.229672e-51 | -8.615850e-47 |
| Msa1233500 | Msa1289010 | 0.863554 | 2.290943e-64 | -8.615850e-47 |
| Msa1233890 | Msa1289010 | 0.857605 | 1.456692e-62 | -8.615850e-47 |
| Msa1236640 | Msa1289010 | -0.814500 | 1.492418e-51 | -8.615850e-47 |
| Msa1252070 | Msa1289010 | 0.812082 | 5.071015e-51 | -8.615850e-47 |
| Msa1258380 | Msa1289010 | -0.827339 | 1.651905e-54 | -8.615850e-47 |
| Msa1259590 | Msa1289010 | -0.805284 | 1.437688e-49 | -8.615850e-47 |
| Msa1267260 | Msa1289010 | 0.816281 | 5.994905e-52 | -8.615850e-47 |
| Msa1279210 | Msa1289010 | 0.824259 | 8.893932e-54 | -8.615850e-47 |
| Msa1280130 | Msa1289010 | 0.821874 | 3.201495e-53 | -8.615850e-47 |
| Msa1282920 | Msa1289010 | 0.815687 | 8.138262e-52 | -8.615850e-47 |
| Msa1284710 | Msa1289010 | 0.801906 | 7.219102e-49 | -8.615850e-47 |
| Msa1289010 | Msa1292730 | 0.815162 | 1.064929e-51 | -8.615850e-47 |
| Msa1289010 | Msa1293280 | 0.800937 | 1.139971e-48 | -8.615850e-47 |
| Msa1289010 | Msa1296940 | 0.822450 | 2.353817e-53 | -8.615850e-47 |
| Msa1289010 | Msa1300350 | -0.820969 | 5.178707e-53 | -8.615850e-47 |
| Msa1289010 | Msa1302190 | -0.833746 | 4.468183e-56 | -8.615850e-47 |
| Msa1289010 | Msa1306430 | 0.828857 | 7.118308e-55 | -8.615850e-47 |
| Msa1289010 | Msa1306750 | 0.803591 | 3.240625e-49 | -8.615850e-47 |
| Msa1289010 | Msa1306760 | 0.801387 | 9.221430e-49 | -8.615850e-47 |
| Msa1289010 | Msa1307740 | 0.828413 | 9.114932e-55 | -8.615850e-47 |
| Msa1289010 | Msa1308590 | 0.802709 | 4.932221e-49 | -8.615850e-47 |
| Msa1289010 | Msa1316560 | -0.816351 | 5.782920e-52 | -8.615850e-47 |
| Msa1289010 | Msa1322190 | 0.844817 | 5.976383e-59 | -8.615850e-47 |
| Msa1289010 | Msa1328700 | 0.835858 | 1.313725e-56 | -8.615850e-47 |
| Msa1289010 | Msa1340020 | 0.806135 | 9.528331e-50 | -8.615850e-47 |
| Msa1289010 | Msa1340650 | 0.819234 | 1.292511e-52 | -8.615850e-47 |
| Msa1289010 | Msa1348950 | 0.818316 | 2.089317e-52 | -8.615850e-47 |
| Msa1289010 | Msa1358610 | -0.823490 | 1.346940e-53 | -8.615850e-47 |
| Msa1289010 | Msa1359650 | -0.823184 | 1.588007e-53 | -8.615850e-47 |
| Msa1289010 | Msa1362880 | 0.822469 | 2.330019e-53 | -8.615850e-47 |
| Msa1289010 | Msa1365040 | -0.816949 | 4.246781e-52 | -8.615850e-47 |
| Msa1289010 | Msa1369530 | 0.809349 | 1.977148e-50 | -8.615850e-47 |
| Msa1289010 | Msa1382160 | 0.818570 | 1.829852e-52 | -8.615850e-47 |
| Msa1289010 | Msa1386430 | 0.811598 | 6.462434e-51 | -8.615850e-47 |
| Msa1289010 | Msa1388790 | -0.807074 | 6.037059e-50 | -8.615850e-47 |
| Msa1289010 | Msa1403580 | -0.828256 | 9.947950e-55 | -8.615850e-47 |
| Msa1289010 | Msa1408790 | 0.826568 | 2.525894e-54 | -8.615850e-47 |
| Msa1289010 | Msa1417830 | -0.816707 | 4.813485e-52 | -8.615850e-47 |
| Msa1289010 | Msa1425010 | 0.802415 | 5.670489e-49 | -8.615850e-47 |
| Msa1289010 | Msa1436040 | 0.822776 | 1.976196e-53 | -8.615850e-47 |
| Msa1289010 | Msa1438700 | 0.811277 | 7.588210e-51 | -8.615850e-47 |
| Msa1289010 | Msa1440000 | 0.819603 | 1.065079e-52 | -8.615850e-47 |
| Msa1289010 | Msa1440600 | 0.818338 | 2.064671e-52 | -8.615850e-47 |
| Msa1289010 | Msa1443290 | -0.834208 | 3.423172e-56 | -8.615850e-47 |
| Msa1289010 | Msa1444250 | -0.828870 | 7.069861e-55 | -8.615850e-47 |
| Msa1289010 | Msa1444740 | 0.828552 | 8.436377e-55 | -8.615850e-47 |
| Msa1289010 | Msa1445420 | -0.819625 | 1.052970e-52 | -8.615850e-47 |
| Msa1289010 | Msa1451620 | -0.831357 | 1.747483e-55 | -8.615850e-47 |
| Msa1289010 | Msa1453560 | 0.802835 | 4.645513e-49 | -8.615850e-47 |
| Msa1289010 | Msa1453780 | -0.801739 | 7.809421e-49 | -8.615850e-47 |
| Msa1289010 | Msa1457670 | -0.815514 | 8.893019e-52 | -8.615850e-47 |
| Msa1289010 | Msa1461250 | -0.805770 | 1.137158e-49 | -8.615850e-47 |
| Msa1289010 | Msa1464940 | 0.815694 | 8.105457e-52 | -8.615850e-47 |
| Msa0365490 | Msa1289010 | 0.827154 | 1.829869e-54 | -8.615850e-47 |
| Msa0379640 | Msa1289010 | 0.823060 | 1.697451e-53 | -8.615850e-47 |
| Msa0380040 | Msa1289010 | 0.826453 | 2.690844e-54 | -8.615850e-47 |
| Msa0381620 | Msa1289010 | -0.806095 | 9.713310e-50 | -8.615850e-47 |
| Msa0389810 | Msa1289010 | 0.827429 | 1.571960e-54 | -8.615850e-47 |
| Msa0394340 | Msa1289010 | 0.825409 | 4.761343e-54 | -8.615850e-47 |
| Msa0404000 | Msa1289010 | 0.827621 | 1.414284e-54 | -8.615850e-47 |
| Msa0404030 | Msa1289010 | 0.826454 | 2.689783e-54 | -8.615850e-47 |
| Msa0405370 | Msa1289010 | 0.840420 | 8.788054e-58 | -8.615850e-47 |
| Msa0414950 | Msa1289010 | -0.806417 | 8.312148e-50 | -8.615850e-47 |
| Msa0428930 | Msa1289010 | 0.801931 | 7.131888e-49 | -8.615850e-47 |
| Msa0429290 | Msa1289010 | 0.818460 | 1.938209e-52 | -8.615850e-47 |
| Msa0442200 | Msa1289010 | 0.824926 | 6.192896e-54 | -8.615850e-47 |
| Msa0442850 | Msa1289010 | 0.848086 | 7.669555e-60 | -8.615850e-47 |
| Msa0443920 | Msa1289010 | 0.813173 | 2.927293e-51 | -8.615850e-47 |
| Msa0449590 | Msa1289010 | -0.806905 | 6.556359e-50 | -8.615850e-47 |
| Msa0449760 | Msa1289010 | 0.837938 | 3.868354e-57 | -8.615850e-47 |
| Msa0449830 | Msa1289010 | 0.814585 | 1.429425e-51 | -8.615850e-47 |
| Msa0458440 | Msa1289010 | 0.815578 | 8.603074e-52 | -8.615850e-47 |
| Msa0459770 | Msa1289010 | -0.803299 | 3.724394e-49 | -8.615850e-47 |
| Msa0464900 | Msa1289010 | 0.826894 | 2.111979e-54 | -8.615850e-47 |
| Msa0465670 | Msa1289010 | -0.802979 | 4.337494e-49 | -8.615850e-47 |
| Msa0466390 | Msa1289010 | 0.809328 | 1.997446e-50 | -8.615850e-47 |
| Msa0468130 | Msa1289010 | 0.836025 | 1.191671e-56 | -8.615850e-47 |
| Msa0473240 | Msa1289010 | 0.841481 | 4.628885e-58 | -8.615850e-47 |
| Msa0475410 | Msa1289010 | 0.801158 | 1.027567e-48 | -8.615850e-47 |
| Msa0475580 | Msa1289010 | 0.830629 | 2.637742e-55 | -8.615850e-47 |
| Msa0480320 | Msa1289010 | 0.836579 | 8.617577e-57 | -8.615850e-47 |
| Msa0482190 | Msa1289010 | -0.829806 | 4.189980e-55 | -8.615850e-47 |
| Msa0982270 | Msa1289010 | 0.840249 | 9.743458e-58 | -8.615850e-47 |
| Msa0992490 | Msa1289010 | -0.845759 | 3.324476e-59 | -8.615850e-47 |
| Msa0993290 | Msa1289010 | 0.803710 | 3.060746e-49 | -8.615850e-47 |
| Msa0993600 | Msa1289010 | 0.806455 | 8.158464e-50 | -8.615850e-47 |
| Msa0999040 | Msa1289010 | 0.803809 | 2.920310e-49 | -8.615850e-47 |
| Msa1015060 | Msa1289010 | 0.816858 | 4.452025e-52 | -8.615850e-47 |
| Msa1019840 | Msa1289010 | -0.829304 | 5.549317e-55 | -8.615850e-47 |
| Msa1026760 | Msa1289010 | 0.837753 | 4.314504e-57 | -8.615850e-47 |
| Msa1026790 | Msa1289010 | 0.841681 | 4.100100e-58 | -8.615850e-47 |
| Msa1033410 | Msa1289010 | -0.800644 | 1.308564e-48 | -8.615850e-47 |
| Msa1039880 | Msa1289010 | 0.833698 | 4.592940e-56 | -8.615850e-47 |
| Msa1043390 | Msa1289010 | 0.800507 | 1.395176e-48 | -8.615850e-47 |
| Msa1072460 | Msa1289010 | -0.827526 | 1.489814e-54 | -8.615850e-47 |
| Msa1075220 | Msa1289010 | -0.815301 | 9.917359e-52 | -8.615850e-47 |
| Msa1076570 | Msa1289010 | -0.804482 | 2.115065e-49 | -8.615850e-47 |
| Msa1082500 | Msa1289010 | 0.801085 | 1.063509e-48 | -8.615850e-47 |
| Msa1085300 | Msa1289010 | 0.800278 | 1.553168e-48 | -8.615850e-47 |
| Msa1085920 | Msa1289010 | 0.821817 | 3.300578e-53 | -8.615850e-47 |
| Msa1087470 | Msa1289010 | 0.820138 | 8.036590e-53 | -8.615850e-47 |
| Msa1092090 | Msa1289010 | 0.832515 | 9.044809e-56 | -8.615850e-47 |
| Msa1092820 | Msa1289010 | 0.805534 | 1.274264e-49 | -8.615850e-47 |
| Msa1095480 | Msa1289010 | 0.813204 | 2.881097e-51 | -8.615850e-47 |
| Msa0265820 | Msa1289010 | 0.805855 | 1.091222e-49 | -8.615850e-47 |
| Msa0269450 | Msa1289010 | 0.835987 | 1.218333e-56 | -8.615850e-47 |
| Msa0270220 | Msa1289010 | -0.823791 | 1.145213e-53 | -8.615850e-47 |
| Msa0270270 | Msa1289010 | 0.822886 | 1.863423e-53 | -8.615850e-47 |
| Msa0282250 | Msa1289010 | 0.818219 | 2.197249e-52 | -8.615850e-47 |
| Msa0288240 | Msa1289010 | 0.811947 | 5.424205e-51 | -8.615850e-47 |
| Msa0296760 | Msa1289010 | 0.831257 | 1.849302e-55 | -8.615850e-47 |
| Msa0306210 | Msa1289010 | -0.804683 | 1.920508e-49 | -8.615850e-47 |
| Msa0307830 | Msa1289010 | -0.837353 | 5.465445e-57 | -8.615850e-47 |
| Msa0315290 | Msa1289010 | 0.805798 | 1.121676e-49 | -8.615850e-47 |
| Msa0326670 | Msa1289010 | 0.822896 | 1.853378e-53 | -8.615850e-47 |
| Msa0328210 | Msa1289010 | 0.801927 | 7.145501e-49 | -8.615850e-47 |
| Msa0333720 | Msa1289010 | -0.815022 | 1.143454e-51 | -8.615850e-47 |
| Msa0344830 | Msa1289010 | 0.820065 | 8.352256e-53 | -8.615850e-47 |
| Msa0347360 | Msa1289010 | 0.805617 | 1.224500e-49 | -8.615850e-47 |
| Msa0351810 | Msa1289010 | 0.803202 | 3.900718e-49 | -8.615850e-47 |
| Msa0356550 | Msa1289010 | -0.805041 | 1.616875e-49 | -8.615850e-47 |
| Msa0356960 | Msa1289010 | 0.828318 | 9.608091e-55 | -8.615850e-47 |
| Msa1109570 | Msa1289010 | 0.800606 | 1.331988e-48 | -8.615850e-47 |
| Msa1116130 | Msa1289010 | -0.818735 | 1.678170e-52 | -8.615850e-47 |
| Msa1116690 | Msa1289010 | 0.806806 | 6.877482e-50 | -8.615850e-47 |
| Msa1124540 | Msa1289010 | -0.807567 | 4.745790e-50 | -8.615850e-47 |
| Msa1131940 | Msa1289010 | -0.827922 | 1.197053e-54 | -8.615850e-47 |
| Msa1143930 | Msa1289010 | -0.825833 | 3.779342e-54 | -8.615850e-47 |
| Msa1154160 | Msa1289010 | 0.812141 | 4.921047e-51 | -8.615850e-47 |
| Msa1162550 | Msa1289010 | -0.805412 | 1.351691e-49 | -8.615850e-47 |
| Msa1171870 | Msa1289010 | 0.822289 | 2.565117e-53 | -8.615850e-47 |
| Msa1175330 | Msa1289010 | 0.807699 | 4.449151e-50 | -8.615850e-47 |
| Msa1183100 | Msa1289010 | -0.810806 | 9.595700e-51 | -8.615850e-47 |
| Msa1187520 | Msa1289010 | 0.824307 | 8.667047e-54 | -8.615850e-47 |
| Msa1199560 | Msa1289010 | 0.828493 | 8.721760e-55 | -8.615850e-47 |
| Msa1217430 | Msa1289010 | -0.823101 | 1.659978e-53 | -8.615850e-47 |
| Msa1217810 | Msa1289010 | 0.826864 | 2.146913e-54 | -8.615850e-47 |
| Msa1217830 | Msa1289010 | 0.807199 | 5.679250e-50 | -8.615850e-47 |
| Msa0485500 | Msa1289010 | -0.819065 | 1.412505e-52 | -8.615850e-47 |
| Msa0488270 | Msa1289010 | 0.812791 | 3.549574e-51 | -8.615850e-47 |
| Msa0489610 | Msa1289010 | 0.815879 | 7.373272e-52 | -8.615850e-47 |
| Msa0497770 | Msa1289010 | -0.806020 | 1.007245e-49 | -8.615850e-47 |
| Msa0505060 | Msa1289010 | 0.802070 | 6.678505e-49 | -8.615850e-47 |
| Msa0511720 | Msa1289010 | -0.803900 | 2.795352e-49 | -8.615850e-47 |
| Msa0519220 | Msa1289010 | 0.824191 | 9.224125e-54 | -8.615850e-47 |
| Msa0535030 | Msa1289010 | 0.804151 | 2.479142e-49 | -8.615850e-47 |
| Msa0535060 | Msa1289010 | 0.806520 | 7.902872e-50 | -8.615850e-47 |
| Msa0536220 | Msa1289010 | 0.806947 | 6.421601e-50 | -8.615850e-47 |
| Msa0540070 | Msa1289010 | 0.813675 | 2.269521e-51 | -8.615850e-47 |
| Msa0553220 | Msa1289010 | -0.851497 | 8.541728e-61 | -8.615850e-47 |
| Msa0577220 | Msa1289010 | 0.815429 | 9.286077e-52 | -8.615850e-47 |
| Msa0578970 | Msa1289010 | 0.816466 | 5.451259e-52 | -8.615850e-47 |
| Msa0585000 | Msa1289010 | -0.802460 | 5.552169e-49 | -8.615850e-47 |
| Msa0591770 | Msa1289010 | 0.814346 | 1.614785e-51 | -8.615850e-47 |
| Msa0598460 | Msa1289010 | 0.818771 | 1.647519e-52 | -8.615850e-47 |
| Msa0599580 | Msa1289010 | 0.813908 | 2.016551e-51 | -8.615850e-47 |
| Msa0599890 | Msa1289010 | 0.808418 | 3.127060e-50 | -8.615850e-47 |
| Msa0844900 | Msa1289010 | 0.806002 | 1.016069e-49 | -8.615850e-47 |
| Msa0845000 | Msa1289010 | 0.804295 | 2.313337e-49 | -8.615850e-47 |
| Msa0853170 | Msa1289010 | 0.825275 | 5.124101e-54 | -8.615850e-47 |
| Msa0864470 | Msa1289010 | -0.838438 | 2.876465e-57 | -8.615850e-47 |
| Msa0869120 | Msa1289010 | 0.813871 | 2.055246e-51 | -8.615850e-47 |
| Msa0876580 | Msa1289010 | 0.810841 | 9.429673e-51 | -8.615850e-47 |
| Msa0876850 | Msa1289010 | -0.846685 | 1.859684e-59 | -8.615850e-47 |
| Msa0891600 | Msa1289010 | -0.816085 | 6.630606e-52 | -8.615850e-47 |
| Msa0899230 | Msa1289010 | 0.802612 | 5.166462e-49 | -8.615850e-47 |
| Msa0908170 | Msa1289010 | 0.813757 | 2.177783e-51 | -8.615850e-47 |
| Msa0910000 | Msa1289010 | 0.807021 | 6.193667e-50 | -8.615850e-47 |
| Msa0910980 | Msa1289010 | -0.834324 | 3.201610e-56 | -8.615850e-47 |
| Msa0927670 | Msa1289010 | 0.824151 | 9.429085e-54 | -8.615850e-47 |
| Msa0930460 | Msa1289010 | -0.812023 | 5.222395e-51 | -8.615850e-47 |
| Msa0942080 | Msa1289010 | -0.830758 | 2.451639e-55 | -8.615850e-47 |
| Msa0944550 | Msa1289010 | 0.803904 | 2.790303e-49 | -8.615850e-47 |
| Msa0960160 | Msa1289010 | 0.813608 | 2.348926e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289010 | MtrunA17_Chr8g0362671 | 90.722 | 97 | 8 | 1 | 37 | 132 | 35 | 131 | 3.62e-58 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 45 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGACGGCGATGGCTTTA+AGG | 0.159670 | 8_3:+42526933 | Msa1289010:CDS |
| TATAGAATGAACGTACTTAA+TGG | 0.254199 | 8_3:+42527007 | Msa1289010:exon |
| TTCCTGTTAATTCCTATAGA+AGG | 0.272578 | 8_3:+42527346 | Msa1289010:three_prime_UTR |
| AAAGAAGCGTTTGTAAGATT+TGG | 0.282896 | 8_3:-42527384 | None:intergenic |
| TACCAATTTGCCACAACTTC+TGG | 0.288754 | 8_3:+42527241 | Msa1289010:three_prime_UTR |
| CAAGAAACAGCTTAATAAAA+AGG | 0.299718 | 8_3:+42526789 | Msa1289010:CDS |
| ATATATATCACTAATACTAT+AGG | 0.328128 | 8_3:-42527303 | None:intergenic |
| CACCAGAAGTTGTGGCAAAT+TGG | 0.335730 | 8_3:-42527243 | None:intergenic |
| GGAATATTTAACAATCCTTC+AGG | 0.354255 | 8_3:-42526745 | None:intergenic |
| ACAACAGCCTCCAAACAAAA+TGG | 0.355141 | 8_3:+42526915 | Msa1289010:CDS |
| ATGGACGGCGATGGCTTTAA+GGG | 0.372258 | 8_3:+42526934 | Msa1289010:CDS |
| ACCTTGCCCTGCCCAACGGC+GGG | 0.389737 | 8_3:+42524609 | Msa1289010:CDS |
| GTAGCACTGCCGCCGTAGAT+TGG | 0.397526 | 8_3:-42524588 | None:intergenic |
| AGCTGTTTCTTGGTCTTCAA+TGG | 0.399678 | 8_3:-42526778 | None:intergenic |
| GTCTTCAATGGTGTTGGCAT+TGG | 0.406601 | 8_3:-42526766 | None:intergenic |
| TTCTTGGTCTTCAATGGTGT+TGG | 0.407736 | 8_3:-42526772 | None:intergenic |
| ACCCTTCTATAGGAATTAAC+AGG | 0.408743 | 8_3:-42527348 | None:intergenic |
| TGACCCACGTGCGATGGCAT+GGG | 0.410175 | 8_3:+42527200 | Msa1289010:three_prime_UTR |
| TATATATCACTAATACTATA+GGG | 0.421032 | 8_3:-42527302 | None:intergenic |
| TAGCACTGCCGCCGTAGATT+GGG | 0.422695 | 8_3:-42524587 | None:intergenic |
| TGAATCTCACATAAAATAGT+AGG | 0.427610 | 8_3:+42527078 | Msa1289010:three_prime_UTR |
| CTGACCCACGTGCGATGGCA+TGG | 0.434048 | 8_3:+42527199 | Msa1289010:three_prime_UTR |
| ATTCGATGGCTGCAAGAGAT+TGG | 0.457289 | 8_3:+42524553 | None:intergenic |
| TCCTGTTAATTCCTATAGAA+GGG | 0.500371 | 8_3:+42527347 | Msa1289010:three_prime_UTR |
| TACCTTGCCCTGCCCAACGG+CGG | 0.500465 | 8_3:+42524608 | Msa1289010:CDS |
| TAGAAAGCAGGTAGATAAGA+TGG | 0.505727 | 8_3:+42526720 | Msa1289010:CDS |
| TTCTTCTGACCCACGTGCGA+TGG | 0.513378 | 8_3:+42527194 | Msa1289010:three_prime_UTR |
| CCCCGCCGTTGGGCAGGGCA+AGG | 0.514153 | 8_3:-42524610 | None:intergenic |
| TATCCCCATGCCATCGCACG+TGG | 0.519207 | 8_3:-42527204 | None:intergenic |
| TGCTACCTTGCCCTGCCCAA+CGG | 0.533834 | 8_3:+42524605 | Msa1289010:CDS |
| TTGTGACTCTTCAACAAGGT+TGG | 0.537445 | 8_3:-42526896 | None:intergenic |
| CCTTGCCCTGCCCAACGGCG+GGG | 0.557382 | 8_3:+42524610 | Msa1289010:CDS |
| GACCCACGTGCGATGGCATG+GGG | 0.566110 | 8_3:+42527201 | Msa1289010:three_prime_UTR |
| GCTTATTGCAGGTAGAAAGC+AGG | 0.570742 | 8_3:+42526708 | Msa1289010:intron |
| CGATGGCTGCAAGAGATTGG+TGG | 0.571244 | 8_3:+42524556 | None:intergenic |
| CCAAACAAAATGGACGGCGA+TGG | 0.583460 | 8_3:+42526925 | Msa1289010:CDS |
| AGGGACAAATTACAAGAGCT+AGG | 0.586497 | 8_3:-42527283 | None:intergenic |
| GCTCAGTACACCAGAAGTTG+TGG | 0.587326 | 8_3:-42527251 | None:intergenic |
| TTTACACAATAAAAGAGGGA+GGG | 0.589838 | 8_3:+42527113 | Msa1289010:three_prime_UTR |
| TGGAAGACAAGCCCAATCTA+CGG | 0.599195 | 8_3:+42524576 | Msa1289010:CDS |
| CAGCCTCCAAACAAAATGGA+CGG | 0.632337 | 8_3:+42526919 | Msa1289010:CDS |
| GTAGATAAGATGGTGCCTGA+AGG | 0.644164 | 8_3:+42526730 | Msa1289010:CDS |
| GCTGTTGTGACTCTTCAACA+AGG | 0.677651 | 8_3:-42526900 | None:intergenic |
| ATCCCCATGCCATCGCACGT+GGG | 0.708409 | 8_3:-42527203 | None:intergenic |
| AAGACAAGCCCAATCTACGG+CGG | 0.746364 | 8_3:+42524579 | Msa1289010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGTAACCAATATAATAA+AGG | + | chr8_3:42525581-42525600 | Msa1289010:intron | 15.0% |
| !! | TAATTGAATATAATCCAAAT+AGG | - | chr8_3:42526657-42526676 | None:intergenic | 15.0% |
| !! | TATATATCACTAATACTATA+GGG | - | chr8_3:42527305-42527324 | None:intergenic | 15.0% |
| !! | ATATATATCACTAATACTAT+AGG | - | chr8_3:42527306-42527325 | None:intergenic | 15.0% |
| !! | AAATTCTATCTTACATACTT+GGG | - | chr8_3:42524796-42524815 | None:intergenic | 20.0% |
| !! | TAAATTCTATCTTACATACT+TGG | - | chr8_3:42524797-42524816 | None:intergenic | 20.0% |
| !! | TATGTAAGATAGAATTTAAG+AGG | + | chr8_3:42524799-42524818 | Msa1289010:intron | 20.0% |
| !!! | TTATTTGAACAACCATTTTT+GGG | + | chr8_3:42524826-42524845 | Msa1289010:intron | 20.0% |
| !! | AAAATGTTGTTGCAATATTT+GGG | - | chr8_3:42524953-42524972 | None:intergenic | 20.0% |
| !! | TAAAATGTTGTTGCAATATT+TGG | - | chr8_3:42524954-42524973 | None:intergenic | 20.0% |
| !! | ATTTATTATCCAAAGTGAAT+GGG | + | chr8_3:42525014-42525033 | Msa1289010:intron | 20.0% |
| !! | ACGAAAAATTATAGACTATA+TGG | - | chr8_3:42525327-42525346 | None:intergenic | 20.0% |
| !!! | TTTTTTCATGGTTTTATTTC+CGG | + | chr8_3:42525498-42525517 | Msa1289010:intron | 20.0% |
| !! | TTAAGACTCCTTTATTATAT+TGG | - | chr8_3:42525592-42525611 | None:intergenic | 20.0% |
| !! | AATCTAATAGAAGAAAGAAA+AGG | - | chr8_3:42525757-42525776 | None:intergenic | 20.0% |
| !! | TTTCTTTCTTCTATTAGATT+AGG | + | chr8_3:42525757-42525776 | Msa1289010:intron | 20.0% |
| !!! | ATTATTTGGTTCTTTACTAA+TGG | + | chr8_3:42525843-42525862 | Msa1289010:intron | 20.0% |
| !!! | TTATTTGGTTCTTTACTAAT+GGG | + | chr8_3:42525844-42525863 | Msa1289010:intron | 20.0% |
| !!! | AATTTCAGTTAAGAATCTTT+TGG | + | chr8_3:42526004-42526023 | Msa1289010:intron | 20.0% |
| !!! | ATTTCAGTTAAGAATCTTTT+GGG | + | chr8_3:42526005-42526024 | Msa1289010:intron | 20.0% |
| !!! | CAATGTTTTCGATAAAAATA+TGG | - | chr8_3:42526543-42526562 | None:intergenic | 20.0% |
| !!! | CATATTTTTATCGAAAACAT+TGG | + | chr8_3:42526541-42526560 | Msa1289010:intron | 20.0% |
| !!! | TGAATTTTACACAATAAAAG+AGG | + | chr8_3:42527108-42527127 | Msa1289010:three_prime_UTR | 20.0% |
| !!! | GAATTTTACACAATAAAAGA+GGG | + | chr8_3:42527109-42527128 | Msa1289010:three_prime_UTR | 20.0% |
| !! | CTATTTTCTGTTAGGATATA+GGG | + | chr8_3:42524750-42524769 | Msa1289010:intron | 25.0% |
| !! | GTTATTTGAACAACCATTTT+TGG | + | chr8_3:42524825-42524844 | Msa1289010:intron | 25.0% |
| ! | GATTTATTATCCAAAGTGAA+TGG | + | chr8_3:42525013-42525032 | Msa1289010:intron | 25.0% |
| ! | TTTATTATCCAAAGTGAATG+GGG | + | chr8_3:42525015-42525034 | Msa1289010:intron | 25.0% |
| !!! | AGTATTTGGTTCTTTACTAA+TGG | + | chr8_3:42525254-42525273 | Msa1289010:intron | 25.0% |
| !!! | GTATTTGGTTCTTTACTAAT+GGG | + | chr8_3:42525255-42525274 | Msa1289010:intron | 25.0% |
| !!! | TTTCATCATCTTGCTTTTAA+TGG | + | chr8_3:42525449-42525468 | Msa1289010:intron | 25.0% |
| !! | TATATTGGTTACTTTAAGTG+TGG | - | chr8_3:42525577-42525596 | None:intergenic | 25.0% |
| ! | TCGTATTCAATCATATTCAA+TGG | + | chr8_3:42525612-42525631 | Msa1289010:intron | 25.0% |
| ! | CGTATTCAATCATATTCAAT+GGG | + | chr8_3:42525613-42525632 | Msa1289010:intron | 25.0% |
| ! | AGAAGAAGAGTAGAAAATAT+GGG | - | chr8_3:42525674-42525693 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAGTAGAAAATA+TGG | - | chr8_3:42525675-42525694 | None:intergenic | 25.0% |
| ! | AGTAAAGAACCAAATAATGT+GGG | - | chr8_3:42525841-42525860 | None:intergenic | 25.0% |
| ! | TAGTAAAGAACCAAATAATG+TGG | - | chr8_3:42525842-42525861 | None:intergenic | 25.0% |
| ! | TAGTCTATAATTTAACCAAG+TGG | + | chr8_3:42525961-42525980 | Msa1289010:intron | 25.0% |
| !! | TTTTAGTCAGGAATTGAATT+TGG | - | chr8_3:42526036-42526055 | None:intergenic | 25.0% |
| !!! | TTATTTTTGTCTTAACCCTT+CGG | - | chr8_3:42526136-42526155 | None:intergenic | 25.0% |
| ! | ATGACAACTATCTATTTGAT+TGG | + | chr8_3:42526347-42526366 | Msa1289010:intron | 25.0% |
| !!! | TTTCTTCTGAAGTACATTAT+TGG | - | chr8_3:42526389-42526408 | None:intergenic | 25.0% |
| ! | CAATCAAACTTTATTCAACT+AGG | + | chr8_3:42526472-42526491 | Msa1289010:intron | 25.0% |
| !! | CTTTTTCTACCTTTAGTAAT+TGG | + | chr8_3:42526594-42526613 | Msa1289010:intron | 25.0% |
| !!! | CTTTTTATTAAGCTGTTTCT+TGG | - | chr8_3:42526791-42526810 | None:intergenic | 25.0% |
| ! | CAAGAAACAGCTTAATAAAA+AGG | + | chr8_3:42526789-42526808 | Msa1289010:CDS | 25.0% |
| !!! | ATTCTGTTTTGAAACAAAAG+TGG | + | chr8_3:42526822-42526841 | Msa1289010:CDS | 25.0% |
| ! | ATTAATCTTCTGCAGAAAAA+TGG | + | chr8_3:42526958-42526977 | Msa1289010:CDS | 25.0% |
| ! | TTAATCTTCTGCAGAAAAAT+GGG | + | chr8_3:42526959-42526978 | Msa1289010:CDS | 25.0% |
| ! | TATAGAATGAACGTACTTAA+TGG | + | chr8_3:42527007-42527026 | Msa1289010:exon | 25.0% |
| ! | TGAATCTCACATAAAATAGT+AGG | + | chr8_3:42527078-42527097 | Msa1289010:three_prime_UTR | 25.0% |
| ! | AAGTGTACCTATTTTCTGTT+AGG | + | chr8_3:42524742-42524761 | Msa1289010:intron | 30.0% |
| CCTATATCCTAACAGAAAAT+AGG | - | chr8_3:42524752-42524771 | None:intergenic | 30.0% | |
| ! | CCTATTTTCTGTTAGGATAT+AGG | + | chr8_3:42524749-42524768 | Msa1289010:intron | 30.0% |
| ACATGAAGACCAAAAAGATA+GGG | + | chr8_3:42524888-42524907 | Msa1289010:intron | 30.0% | |
| ! | GAATTTTTGACAAACACCAT+AGG | - | chr8_3:42525159-42525178 | None:intergenic | 30.0% |
| !!! | CCAAATACTCATTTTAGTTG+AGG | - | chr8_3:42525243-42525262 | None:intergenic | 30.0% |
| CCTCAACTAAAATGAGTATT+TGG | + | chr8_3:42525240-42525259 | Msa1289010:intron | 30.0% | |
| ACTCTTACAAGAGAAGTAAT+AGG | + | chr8_3:42525281-42525300 | Msa1289010:intron | 30.0% | |
| GTATCATTCTCTAAGTCTTA+AGG | - | chr8_3:42525354-42525373 | None:intergenic | 30.0% | |
| !! | TTGTTTTGCAAGTTTTAACG+AGG | - | chr8_3:42525395-42525414 | None:intergenic | 30.0% |
| ACTTGCAAAACAAATCTCAA+AGG | + | chr8_3:42525402-42525421 | Msa1289010:intron | 30.0% | |
| CCATGAAAAAAGAATGCATA+TGG | - | chr8_3:42525489-42525508 | None:intergenic | 30.0% | |
| !!! | CCATATGCATTCTTTTTTCA+TGG | + | chr8_3:42525486-42525505 | Msa1289010:intron | 30.0% |
| TCCTATTACTTCTCTTAAAC+CGG | + | chr8_3:42525798-42525817 | Msa1289010:intron | 30.0% | |
| ACTCTTACAAGAGAAGTAAT+AGG | + | chr8_3:42525281-42525300 | Msa1289010:intron | 30.0% | |
| !!! | GACGAAAAATTGTTTTAGTC+AGG | - | chr8_3:42526048-42526067 | None:intergenic | 30.0% |
| ! | TTGGTAATACAAAGTTCTGT+CGG | - | chr8_3:42526087-42526106 | None:intergenic | 30.0% |
| AAAATGAGTAGTTGAGCATA+TGG | + | chr8_3:42526193-42526212 | Msa1289010:intron | 30.0% | |
| AAATGAGTAGTTGAGCATAT+GGG | + | chr8_3:42526194-42526213 | Msa1289010:intron | 30.0% | |
| !!! | TACATTATTGGTTTTGGAGA+AGG | - | chr8_3:42526377-42526396 | None:intergenic | 30.0% |
| !!! | CTGAAGTACATTATTGGTTT+TGG | - | chr8_3:42526383-42526402 | None:intergenic | 30.0% |
| ATCATTACTATGCTTATTGC+AGG | + | chr8_3:42526697-42526716 | Msa1289010:intron | 30.0% | |
| GGAATATTTAACAATCCTTC+AGG | - | chr8_3:42526748-42526767 | None:intergenic | 30.0% | |
| ! | TTTTACACAATAAAAGAGGG+AGG | + | chr8_3:42527112-42527131 | Msa1289010:three_prime_UTR | 30.0% |
| TTTACACAATAAAAGAGGGA+GGG | + | chr8_3:42527113-42527132 | Msa1289010:three_prime_UTR | 30.0% | |
| TTCCTGTTAATTCCTATAGA+AGG | + | chr8_3:42527346-42527365 | Msa1289010:three_prime_UTR | 30.0% | |
| TCCTGTTAATTCCTATAGAA+GGG | + | chr8_3:42527347-42527366 | Msa1289010:three_prime_UTR | 30.0% | |
| ! | TCATTTTCTAACCCTTCTAT+AGG | - | chr8_3:42527361-42527380 | None:intergenic | 30.0% |
| !! | AAAGAAGCGTTTGTAAGATT+TGG | - | chr8_3:42527387-42527406 | None:intergenic | 30.0% |
| ACTTCAATGATCTAGTCAGT+AGG | + | chr8_3:42524646-42524665 | Msa1289010:intron | 35.0% | |
| TTAGGATATAGGGTGATAGT+GGG | + | chr8_3:42524760-42524779 | Msa1289010:intron | 35.0% | |
| TCTATCTTACATACTTGGGT+TGG | - | chr8_3:42524792-42524811 | None:intergenic | 35.0% | |
| CTCGTAAATTGTCCCAAAAA+TGG | - | chr8_3:42524841-42524860 | None:intergenic | 35.0% | |
| GACATGAAGACCAAAAAGAT+AGG | + | chr8_3:42524887-42524906 | Msa1289010:intron | 35.0% | |
| ! | ACTCTTTCTCCCTATCTTTT+TGG | - | chr8_3:42524900-42524919 | None:intergenic | 35.0% |
| ! | AAAGTGAATGGGGTTGATTT+GGG | + | chr8_3:42525025-42525044 | Msa1289010:intron | 35.0% |
| AAACACACAATTGTGACCTA+TGG | + | chr8_3:42525101-42525120 | Msa1289010:intron | 35.0% | |
| ATCCTTTCACAAATAGCCTA+TGG | + | chr8_3:42525140-42525159 | Msa1289010:intron | 35.0% | |
| ! | GATTAACTTCTAGCTATCAC+TGG | + | chr8_3:42525217-42525236 | Msa1289010:intron | 35.0% |
| !! | TTTTGCAAGTTTTAACGAGG+CGG | - | chr8_3:42525392-42525411 | None:intergenic | 35.0% |
| !! | CATCATCTTGCTTTTAATGG+CGG | + | chr8_3:42525452-42525471 | Msa1289010:intron | 35.0% |
| AAGAATGCATATGGAAGCAA+CGG | - | chr8_3:42525480-42525499 | None:intergenic | 35.0% | |
| GAAAATATGGGCAAGCTAAT+AGG | - | chr8_3:42525662-42525681 | None:intergenic | 35.0% | |
| TCCGGTTTAAGAGAAGTAAT+AGG | - | chr8_3:42525802-42525821 | None:intergenic | 35.0% | |
| ACTAACTCACCCACATTATT+TGG | + | chr8_3:42525829-42525848 | Msa1289010:intron | 35.0% | |
| TAATACAAAGTTCTGTCGGA+AGG | - | chr8_3:42526083-42526102 | None:intergenic | 35.0% | |
| CAAAGCCCCTTTCATATTAT+GGG | + | chr8_3:42526108-42526127 | Msa1289010:intron | 35.0% | |
| TCGGTTCCCATAATATGAAA+GGG | - | chr8_3:42526117-42526136 | None:intergenic | 35.0% | |
| TTCGGTTCCCATAATATGAA+AGG | - | chr8_3:42526118-42526137 | None:intergenic | 35.0% | |
| TTTCATATTATGGGAACCGA+AGG | + | chr8_3:42526117-42526136 | Msa1289010:intron | 35.0% | |
| TTCATATTATGGGAACCGAA+GGG | + | chr8_3:42526118-42526137 | Msa1289010:intron | 35.0% | |
| ACCAATGCATCATCAAACAA+GGG | - | chr8_3:42526251-42526270 | None:intergenic | 35.0% | |
| TACACAGTATATCAACGACA+AGG | - | chr8_3:42526298-42526317 | None:intergenic | 35.0% | |
| TTGTCATAGTCACAAGTCAA+TGG | - | chr8_3:42526334-42526353 | None:intergenic | 35.0% | |
| TTGAGCAGTCCAATTACTAA+AGG | - | chr8_3:42526606-42526625 | None:intergenic | 35.0% | |
| TCCTTACTATGGAACCTATT+TGG | + | chr8_3:42526640-42526659 | Msa1289010:intron | 35.0% | |
| TCCAAATAGGTTCCATAGTA+AGG | - | chr8_3:42526644-42526663 | None:intergenic | 35.0% | |
| TAGAAAGCAGGTAGATAAGA+TGG | + | chr8_3:42526720-42526739 | Msa1289010:CDS | 35.0% | |
| ACCCTTCTATAGGAATTAAC+AGG | - | chr8_3:42527351-42527370 | None:intergenic | 35.0% | |
| TAGTCAGTAGGTGATTCATG+TGG | + | chr8_3:42524658-42524677 | Msa1289010:intron | 40.0% | |
| AGTCAGTAGGTGATTCATGT+GGG | + | chr8_3:42524659-42524678 | Msa1289010:intron | 40.0% | |
| GTTAGGATATAGGGTGATAG+TGG | + | chr8_3:42524759-42524778 | Msa1289010:intron | 40.0% | |
| !! | ATATAGGGTGATAGTGGGTT+TGG | + | chr8_3:42524765-42524784 | Msa1289010:intron | 40.0% |
| !! | TATAGGGTGATAGTGGGTTT+GGG | + | chr8_3:42524766-42524785 | Msa1289010:intron | 40.0% |
| CAAATCAACCCCATTCACTT+TGG | - | chr8_3:42525026-42525045 | None:intergenic | 40.0% | |
| ! | CAAAGTGAATGGGGTTGATT+TGG | + | chr8_3:42525024-42525043 | Msa1289010:intron | 40.0% |
| CACCATAGGCTATTTGTGAA+AGG | - | chr8_3:42525145-42525164 | None:intergenic | 40.0% | |
| TGATTACTAGCAGTCACGAA+GGG | - | chr8_3:42525192-42525211 | None:intergenic | 40.0% | |
| TTGATTACTAGCAGTCACGA+AGG | - | chr8_3:42525193-42525212 | None:intergenic | 40.0% | |
| CAAATCTCAAAGGTCGAGAA+AGG | + | chr8_3:42525412-42525431 | Msa1289010:intron | 40.0% | |
| AATATGGGCAAGCTAATAGG+AGG | - | chr8_3:42525659-42525678 | None:intergenic | 40.0% | |
| GGTGAGTTAGTAGCAAATTC+CGG | - | chr8_3:42525820-42525839 | None:intergenic | 40.0% | |
| ! | AATATGAAAGGGGCTTTGGT+TGG | - | chr8_3:42526106-42526125 | None:intergenic | 40.0% |
| CCATAATATGAAAGGGGCTT+TGG | - | chr8_3:42526110-42526129 | None:intergenic | 40.0% | |
| CCAAAGCCCCTTTCATATTA+TGG | + | chr8_3:42526107-42526126 | Msa1289010:intron | 40.0% | |
| CGGTTCCCATAATATGAAAG+GGG | - | chr8_3:42526116-42526135 | None:intergenic | 40.0% | |
| !! | TCCCTTGTTTGATGATGCAT+TGG | + | chr8_3:42526247-42526266 | Msa1289010:intron | 40.0% |
| GACCAATGCATCATCAAACA+AGG | - | chr8_3:42526252-42526271 | None:intergenic | 40.0% | |
| CTGATCTTCTCTCCTTACTA+TGG | + | chr8_3:42526629-42526648 | Msa1289010:intron | 40.0% | |
| ! | TTCTTGGTCTTCAATGGTGT+TGG | - | chr8_3:42526775-42526794 | None:intergenic | 40.0% |
| !! | AGCTGTTTCTTGGTCTTCAA+TGG | - | chr8_3:42526781-42526800 | None:intergenic | 40.0% |
| TTGTGACTCTTCAACAAGGT+TGG | - | chr8_3:42526899-42526918 | None:intergenic | 40.0% | |
| ACAACAGCCTCCAAACAAAA+TGG | + | chr8_3:42526915-42526934 | Msa1289010:CDS | 40.0% | |
| ATCTTCTGCAGAAAAATGGG+AGG | + | chr8_3:42526962-42526981 | Msa1289010:CDS | 40.0% | |
| ACGTGGGTCAGAAGAAAAAA+AGG | - | chr8_3:42527190-42527209 | None:intergenic | 40.0% | |
| TACCAATTTGCCACAACTTC+TGG | + | chr8_3:42527241-42527260 | Msa1289010:three_prime_UTR | 40.0% | |
| AGGGACAAATTACAAGAGCT+AGG | - | chr8_3:42527286-42527305 | None:intergenic | 40.0% | |
| TGGAAGACAAGCCCAATCTA+CGG | + | chr8_3:42524576-42524595 | Msa1289010:CDS | 45.0% | |
| TTCATGTGGGTAAGAGTGAG+AGG | + | chr8_3:42524672-42524691 | Msa1289010:intron | 45.0% | |
| GTCAGCTTCACTGTTGTTGA+TGG | + | chr8_3:42525047-42525066 | Msa1289010:intron | 45.0% | |
| ! | AGCTTCACTGTTGTTGATGG+TGG | + | chr8_3:42525050-42525069 | Msa1289010:intron | 45.0% |
| !! | TGTTGATGGTGGATGACAGA+AGG | + | chr8_3:42525061-42525080 | Msa1289010:intron | 45.0% |
| CTCAAAGGTCGAGAAAGGTT+AGG | + | chr8_3:42525417-42525436 | Msa1289010:intron | 45.0% | |
| GTTCTGTCGGAAGGTAAGTA+AGG | - | chr8_3:42526074-42526093 | None:intergenic | 45.0% | |
| GAGTAGTTGAGCATATGGGT+AGG | + | chr8_3:42526198-42526217 | Msa1289010:intron | 45.0% | |
| TTGAGCATATGGGTAGGAGT+AGG | + | chr8_3:42526204-42526223 | Msa1289010:intron | 45.0% | |
| GCTTATTGCAGGTAGAAAGC+AGG | + | chr8_3:42526708-42526727 | Msa1289010:intron | 45.0% | |
| GTAGATAAGATGGTGCCTGA+AGG | + | chr8_3:42526730-42526749 | Msa1289010:CDS | 45.0% | |
| !! | GTCTTCAATGGTGTTGGCAT+TGG | - | chr8_3:42526769-42526788 | None:intergenic | 45.0% |
| GCTGTTGTGACTCTTCAACA+AGG | - | chr8_3:42526903-42526922 | None:intergenic | 45.0% | |
| CAGCCTCCAAACAAAATGGA+CGG | + | chr8_3:42526919-42526938 | Msa1289010:CDS | 45.0% | |
| CACCAGAAGTTGTGGCAAAT+TGG | - | chr8_3:42527246-42527265 | None:intergenic | 45.0% | |
| AAGACAAGCCCAATCTACGG+CGG | + | chr8_3:42524579-42524598 | Msa1289010:CDS | 50.0% | |
| TACTAGCAGTCACGAAGGGA+CGG | - | chr8_3:42525188-42525207 | None:intergenic | 50.0% | |
| TTATTTCCGGCGCGCTTGTT+TGG | + | chr8_3:42525511-42525530 | Msa1289010:intron | 50.0% | |
| ATGGGCAAGCTAATAGGAGG+AGG | - | chr8_3:42525656-42525675 | None:intergenic | 50.0% | |
| ACCAAGTGGCTTGACTCAAG+TGG | + | chr8_3:42525975-42525994 | Msa1289010:intron | 50.0% | |
| ACCACTTGAGTCAAGCCACT+TGG | - | chr8_3:42525979-42525998 | None:intergenic | 50.0% | |
| TCAACTAGGTGTCAGCTGCA+TGG | + | chr8_3:42526486-42526505 | Msa1289010:intron | 50.0% | |
| !! | TCGCCGTCCATTTTGTTTGG+AGG | - | chr8_3:42526925-42526944 | None:intergenic | 50.0% |
| ! | CCATCGCCGTCCATTTTGTT+TGG | - | chr8_3:42526928-42526947 | None:intergenic | 50.0% |
| CCAAACAAAATGGACGGCGA+TGG | + | chr8_3:42526925-42526944 | Msa1289010:CDS | 50.0% | |
| ! | AATGGACGGCGATGGCTTTA+AGG | + | chr8_3:42526933-42526952 | Msa1289010:CDS | 50.0% |
| !! | ATGGACGGCGATGGCTTTAA+GGG | + | chr8_3:42526934-42526953 | Msa1289010:CDS | 50.0% |
| GCTCAGTACACCAGAAGTTG+TGG | - | chr8_3:42527254-42527273 | None:intergenic | 50.0% | |
| TAGCACTGCCGCCGTAGATT+GGG | - | chr8_3:42524590-42524609 | None:intergenic | 55.0% | |
| !! | TGTGACCTATGGTGTCGCCA+TGG | + | chr8_3:42525112-42525131 | Msa1289010:intron | 55.0% |
| TTGTGAAAGGATCCCCGCCA+TGG | - | chr8_3:42525132-42525151 | None:intergenic | 55.0% | |
| AACTCACCAAACAAGCGCGC+CGG | - | chr8_3:42525520-42525539 | None:intergenic | 55.0% | |
| TTCTTCTGACCCACGTGCGA+TGG | + | chr8_3:42527194-42527213 | Msa1289010:three_prime_UTR | 55.0% | |
| GTAGCACTGCCGCCGTAGAT+TGG | - | chr8_3:42524591-42524610 | None:intergenic | 60.0% | |
| TGCTACCTTGCCCTGCCCAA+CGG | + | chr8_3:42524605-42524624 | Msa1289010:CDS | 60.0% | |
| !! | GACCTATGGTGTCGCCATGG+CGG | + | chr8_3:42525115-42525134 | Msa1289010:intron | 60.0% |
| !! | ACCTATGGTGTCGCCATGGC+GGG | + | chr8_3:42525116-42525135 | Msa1289010:intron | 60.0% |
| TGACCCACGTGCGATGGCAT+GGG | + | chr8_3:42527200-42527219 | Msa1289010:three_prime_UTR | 60.0% | |
| ATCCCCATGCCATCGCACGT+GGG | - | chr8_3:42527206-42527225 | None:intergenic | 60.0% | |
| TATCCCCATGCCATCGCACG+TGG | - | chr8_3:42527207-42527226 | None:intergenic | 60.0% | |
| TACCTTGCCCTGCCCAACGG+CGG | + | chr8_3:42524608-42524627 | Msa1289010:CDS | 65.0% | |
| TGCACTTACGCCCCGCCGTT+GGG | - | chr8_3:42524623-42524642 | None:intergenic | 65.0% | |
| ATGCACTTACGCCCCGCCGT+TGG | - | chr8_3:42524624-42524643 | None:intergenic | 65.0% | |
| !! | CCTATGGTGTCGCCATGGCG+GGG | + | chr8_3:42525117-42525136 | Msa1289010:intron | 65.0% |
| GCAGTCACGAAGGGACGGTG+TGG | - | chr8_3:42525183-42525202 | None:intergenic | 65.0% | |
| CTGACCCACGTGCGATGGCA+TGG | + | chr8_3:42527199-42527218 | Msa1289010:three_prime_UTR | 65.0% | |
| GACCCACGTGCGATGGCATG+GGG | + | chr8_3:42527201-42527220 | Msa1289010:three_prime_UTR | 65.0% | |
| ACCTTGCCCTGCCCAACGGC+GGG | + | chr8_3:42524609-42524628 | Msa1289010:CDS | 70.0% | |
| TTACGCCCCGCCGTTGGGCA+GGG | - | chr8_3:42524618-42524637 | None:intergenic | 70.0% | |
| CCCCGCCATGGCGACACCAT+AGG | - | chr8_3:42525120-42525139 | None:intergenic | 70.0% | |
| CCTTGCCCTGCCCAACGGCG+GGG | + | chr8_3:42524610-42524629 | Msa1289010:CDS | 75.0% | |
| CTTACGCCCCGCCGTTGGGC+AGG | - | chr8_3:42524619-42524638 | None:intergenic | 75.0% | |
| ! | CCCCGCCGTTGGGCAGGGCA+AGG | - | chr8_3:42524613-42524632 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 42524558 | 42527425 | 42524558 | ID=Msa1289010;Name=Msa1289010 |
| chr8_3 | mRNA | 42524558 | 42527425 | 42524558 | ID=Msa1289010-mRNA-1;Parent=Msa1289010;Name=Msa1289010-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0.5|0.5|1|1|2|414|132 |
| chr8_3 | exon | 42524558 | 42524663 | 42524558 | ID=Msa1289010-mRNA-1:exon:11642;Parent=Msa1289010-mRNA-1 |
| chr8_3 | exon | 42526719 | 42527425 | 42526719 | ID=Msa1289010-mRNA-1:exon:11643;Parent=Msa1289010-mRNA-1 |
| chr8_3 | CDS | 42524558 | 42524663 | 42524558 | ID=Msa1289010-mRNA-1:cds;Parent=Msa1289010-mRNA-1 |
| chr8_3 | CDS | 42526719 | 42527011 | 42526719 | ID=Msa1289010-mRNA-1:cds;Parent=Msa1289010-mRNA-1 |
| chr8_3 | three_prime_UTR | 42527012 | 42527425 | 42527012 | ID=Msa1289010-mRNA-1:three_prime_utr;Parent=Msa1289010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
