Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664950 | XP_003604348.4 | 89.428 | 577 | 18 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664950 | sp|Q8BID8|FXL14_MOUSE | 32.934 | 334 | 192 | 18 | 135 | 442 | 69 | 396 | 6.51e-20 | 95.5 |
| Msa0664950 | sp|Q8BID8|FXL14_MOUSE | 34.395 | 314 | 178 | 18 | 230 | 516 | 85 | 397 | 8.02e-18 | 89.0 |
| Msa0664950 | sp|Q8BID8|FXL14_MOUSE | 31.746 | 315 | 190 | 16 | 105 | 394 | 82 | 396 | 1.39e-14 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664950 | A0A396I179 | 89.428 | 577 | 18 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa0664950 | 0.813083 | 3.063190e-51 | -8.615850e-47 |
| Msa0011170 | Msa0664950 | 0.842484 | 2.514767e-58 | -8.615850e-47 |
| Msa0031340 | Msa0664950 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
| Msa0033440 | Msa0664950 | 0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0034110 | Msa0664950 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
| Msa0034490 | Msa0664950 | 0.829140 | 6.081903e-55 | -8.615850e-47 |
| Msa0035150 | Msa0664950 | 0.801720 | 7.880924e-49 | -8.615850e-47 |
| Msa0037880 | Msa0664950 | 0.800339 | 1.510003e-48 | -8.615850e-47 |
| Msa0074700 | Msa0664950 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0090340 | Msa0664950 | 0.839806 | 1.271246e-57 | -8.615850e-47 |
| Msa0095560 | Msa0664950 | 0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0096450 | Msa0664950 | 0.810232 | 1.276624e-50 | -8.615850e-47 |
| Msa0114060 | Msa0664950 | 0.814513 | 1.482519e-51 | -8.615850e-47 |
| Msa0607540 | Msa0664950 | 0.813358 | 2.664817e-51 | -8.615850e-47 |
| Msa0616160 | Msa0664950 | 0.827626 | 1.410334e-54 | -8.615850e-47 |
| Msa0626820 | Msa0664950 | 0.943667 | 7.954875e-103 | -8.615850e-47 |
| Msa0641670 | Msa0664950 | 0.812780 | 3.568621e-51 | -8.615850e-47 |
| Msa0648080 | Msa0664950 | 0.800405 | 1.463796e-48 | -8.615850e-47 |
| Msa0652810 | Msa0664950 | 0.822342 | 2.493235e-53 | -8.615850e-47 |
| Msa0661190 | Msa0664950 | -0.805756 | 1.144489e-49 | -8.615850e-47 |
| Msa0663240 | Msa0664950 | 0.871870 | 4.913219e-67 | -8.615850e-47 |
| Msa0663710 | Msa0664950 | 0.806929 | 6.478945e-50 | -8.615850e-47 |
| Msa0663920 | Msa0664950 | 0.810000 | 1.432943e-50 | -8.615850e-47 |
| Msa0664950 | Msa0672690 | 0.812991 | 3.208739e-51 | -8.615850e-47 |
| Msa0664950 | Msa0688070 | 0.816243 | 6.115215e-52 | -8.615850e-47 |
| Msa0664950 | Msa0688480 | 0.860058 | 2.690970e-63 | -8.615850e-47 |
| Msa0664950 | Msa0689800 | 0.834873 | 2.330442e-56 | -8.615850e-47 |
| Msa0664950 | Msa0743720 | 0.823836 | 1.117948e-53 | -8.615850e-47 |
| Msa0664950 | Msa0766630 | 0.824848 | 6.462770e-54 | -8.615850e-47 |
| Msa0664950 | Msa0805550 | 0.821740 | 3.437751e-53 | -8.615850e-47 |
| Msa0664950 | Msa0828940 | 0.802874 | 4.560638e-49 | -8.615850e-47 |
| Msa0664950 | Msa0832340 | 0.804377 | 2.224080e-49 | -8.615850e-47 |
| Msa0664950 | Msa0876850 | -0.806389 | 8.425000e-50 | -8.615850e-47 |
| Msa0664950 | Msa0907070 | 0.810094 | 1.367652e-50 | -8.615850e-47 |
| Msa0664950 | Msa0924310 | 0.814954 | 1.183983e-51 | -8.615850e-47 |
| Msa0664950 | Msa0925250 | 0.803528 | 3.338612e-49 | -8.615850e-47 |
| Msa0664950 | Msa0925290 | 0.821714 | 3.486515e-53 | -8.615850e-47 |
| Msa0664950 | Msa0927290 | 0.817198 | 3.733560e-52 | -8.615850e-47 |
| Msa0664950 | Msa0927380 | 0.805015 | 1.636591e-49 | -8.615850e-47 |
| Msa0664950 | Msa0931520 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
| Msa0664950 | Msa0942080 | -0.811152 | 8.076454e-51 | -8.615850e-47 |
| Msa0664950 | Msa0969450 | 0.800878 | 1.172247e-48 | -8.615850e-47 |
| Msa0664950 | Msa0969520 | 0.832050 | 1.178948e-55 | -8.615850e-47 |
| Msa0664950 | Msa0969600 | 0.818803 | 1.619719e-52 | -8.615850e-47 |
| Msa0664950 | Msa0969730 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
| Msa0664950 | Msa0976670 | 0.826007 | 3.436092e-54 | -8.615850e-47 |
| Msa0664950 | Msa0983090 | 0.810802 | 9.616089e-51 | -8.615850e-47 |
| Msa0664950 | Msa0991930 | 0.800862 | 1.180978e-48 | -8.615850e-47 |
| Msa0664950 | Msa0993290 | 0.816674 | 4.895407e-52 | -8.615850e-47 |
| Msa0664950 | Msa0993600 | 0.814669 | 1.369438e-51 | -8.615850e-47 |
| Msa0664950 | Msa0997450 | -0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0664950 | Msa1012830 | 0.809235 | 2.091862e-50 | -8.615850e-47 |
| Msa0664950 | Msa1014540 | 0.812577 | 3.952931e-51 | -8.615850e-47 |
| Msa0664950 | Msa1014990 | 0.818481 | 1.916244e-52 | -8.615850e-47 |
| Msa0664950 | Msa1019840 | -0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0664950 | Msa1039800 | 0.811107 | 8.259157e-51 | -8.615850e-47 |
| Msa0664950 | Msa1043050 | 0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa0664950 | Msa1075220 | -0.832802 | 7.678105e-56 | -8.615850e-47 |
| Msa0664950 | Msa1081590 | 0.838719 | 2.433811e-57 | -8.615850e-47 |
| Msa0664950 | Msa1082500 | 0.837915 | 3.920154e-57 | -8.615850e-47 |
| Msa0664950 | Msa1082580 | 0.801024 | 1.094498e-48 | -8.615850e-47 |
| Msa0664950 | Msa1083300 | 0.813108 | 3.024465e-51 | -8.615850e-47 |
| Msa0664950 | Msa1116130 | -0.817681 | 2.906865e-52 | -8.615850e-47 |
| Msa0664950 | Msa1131220 | 0.801273 | 9.730212e-49 | -8.615850e-47 |
| Msa0664950 | Msa1131940 | -0.802413 | 5.678060e-49 | -8.615850e-47 |
| Msa0664950 | Msa1139000 | -0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0664950 | Msa1162550 | -0.813197 | 2.890858e-51 | -8.615850e-47 |
| Msa0664950 | Msa1174040 | 0.820745 | 5.830399e-53 | -8.615850e-47 |
| Msa0664950 | Msa1224480 | 0.818036 | 2.416733e-52 | -8.615850e-47 |
| Msa0664950 | Msa1233890 | 0.843221 | 1.601492e-58 | -8.615850e-47 |
| Msa0664950 | Msa1244250 | 0.809155 | 2.175517e-50 | -8.615850e-47 |
| Msa0664950 | Msa1246510 | 0.802147 | 6.438907e-49 | -8.615850e-47 |
| Msa0664950 | Msa1249490 | 0.819248 | 1.283351e-52 | -8.615850e-47 |
| Msa0664950 | Msa1253020 | 0.804496 | 2.101165e-49 | -8.615850e-47 |
| Msa0664950 | Msa1284680 | 0.827406 | 1.592526e-54 | -8.615850e-47 |
| Msa0664950 | Msa1325860 | -0.829321 | 5.495885e-55 | -8.615850e-47 |
| Msa0664950 | Msa1327680 | 0.810837 | 9.450980e-51 | -8.615850e-47 |
| Msa0664950 | Msa1348950 | 0.827278 | 1.709335e-54 | -8.615850e-47 |
| Msa0664950 | Msa1357530 | 0.821935 | 3.098083e-53 | -8.615850e-47 |
| Msa0664950 | Msa1362880 | 0.814245 | 1.699999e-51 | -8.615850e-47 |
| Msa0664950 | Msa1372760 | 0.806396 | 8.394152e-50 | -8.615850e-47 |
| Msa0664950 | Msa1382160 | 0.858370 | 8.629898e-63 | -8.615850e-47 |
| Msa0664950 | Msa1386430 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0664950 | Msa1393040 | 0.812554 | 3.999575e-51 | -8.615850e-47 |
| Msa0664950 | Msa1403480 | 0.840186 | 1.011721e-57 | -8.615850e-47 |
| Msa0664950 | Msa1410690 | 0.810932 | 9.015241e-51 | -8.615850e-47 |
| Msa0664950 | Msa1411020 | 0.855771 | 5.044990e-62 | -8.615850e-47 |
| Msa0664950 | Msa1412890 | 0.833493 | 5.165667e-56 | -8.615850e-47 |
| Msa0664950 | Msa1419960 | 0.802761 | 4.811809e-49 | -8.615850e-47 |
| Msa0664950 | Msa1420290 | 0.853980 | 1.669114e-61 | -8.615850e-47 |
| Msa0664950 | Msa1420490 | 0.854065 | 1.576870e-61 | -8.615850e-47 |
| Msa0664950 | Msa1423390 | 0.851797 | 7.021714e-61 | -8.615850e-47 |
| Msa0664950 | Msa1424290 | 0.854659 | 1.062543e-61 | -8.615850e-47 |
| Msa0664950 | Msa1427230 | 0.805312 | 1.418393e-49 | -8.615850e-47 |
| Msa0664950 | Msa1434350 | 0.861310 | 1.122514e-63 | -8.615850e-47 |
| Msa0664950 | Msa1435270 | 0.818056 | 2.391516e-52 | -8.615850e-47 |
| Msa0664950 | Msa1439320 | 0.865665 | 5.007949e-65 | -8.615850e-47 |
| Msa0664950 | Msa1440370 | 0.852259 | 5.189760e-61 | -8.615850e-47 |
| Msa0664950 | Msa1440810 | 0.852995 | 3.201045e-61 | -8.615850e-47 |
| Msa0664950 | Msa1443060 | 0.812716 | 3.685306e-51 | -8.615850e-47 |
| Msa0664950 | Msa1444740 | 0.817495 | 3.202165e-52 | -8.615850e-47 |
| Msa0664950 | Msa1445030 | 0.808414 | 3.133912e-50 | -8.615850e-47 |
| Msa0664950 | Msa1451620 | -0.810762 | 9.812403e-51 | -8.615850e-47 |
| Msa0664950 | Msa1452240 | 0.813594 | 2.364767e-51 | -8.615850e-47 |
| Msa0664950 | Msa1453080 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
| Msa0664950 | Msa1453560 | 0.806463 | 8.126458e-50 | -8.615850e-47 |
| Msa0664950 | Msa1459950 | 0.845317 | 4.378540e-59 | -8.615850e-47 |
| Msa0664950 | Msa1460050 | 0.843972 | 1.008290e-58 | -8.615850e-47 |
| Msa0664950 | Msa1460830 | 0.810446 | 1.148091e-50 | -8.615850e-47 |
| Msa0664950 | Msa1464940 | 0.839342 | 1.678337e-57 | -8.615850e-47 |
| Msa0131770 | Msa0664950 | 0.809268 | 2.057531e-50 | -8.615850e-47 |
| Msa0166870 | Msa0664950 | 0.816535 | 5.260487e-52 | -8.615850e-47 |
| Msa0178960 | Msa0664950 | 0.807465 | 4.987368e-50 | -8.615850e-47 |
| Msa0205510 | Msa0664950 | 0.800650 | 1.304882e-48 | -8.615850e-47 |
| Msa0208090 | Msa0664950 | 0.806322 | 8.701632e-50 | -8.615850e-47 |
| Msa0210450 | Msa0664950 | 0.804634 | 1.965668e-49 | -8.615850e-47 |
| Msa0218370 | Msa0664950 | 0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa0220580 | Msa0664950 | 0.833822 | 4.275803e-56 | -8.615850e-47 |
| Msa0223410 | Msa0664950 | -0.809049 | 2.293071e-50 | -8.615850e-47 |
| Msa0226890 | Msa0664950 | 0.817003 | 4.129898e-52 | -8.615850e-47 |
| Msa0233300 | Msa0664950 | 0.811322 | 7.417166e-51 | -8.615850e-47 |
| Msa0236630 | Msa0664950 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0373450 | Msa0664950 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0373930 | Msa0664950 | 0.815639 | 8.337635e-52 | -8.615850e-47 |
| Msa0379640 | Msa0664950 | 0.823139 | 1.626295e-53 | -8.615850e-47 |
| Msa0402290 | Msa0664950 | 0.801864 | 7.361551e-49 | -8.615850e-47 |
| Msa0431690 | Msa0664950 | 0.834216 | 3.407498e-56 | -8.615850e-47 |
| Msa0442200 | Msa0664950 | 0.805076 | 1.589203e-49 | -8.615850e-47 |
| Msa0243710 | Msa0664950 | 0.809943 | 1.473776e-50 | -8.615850e-47 |
| Msa0251320 | Msa0664950 | 0.804463 | 2.134127e-49 | -8.615850e-47 |
| Msa0258760 | Msa0664950 | 0.829796 | 4.211876e-55 | -8.615850e-47 |
| Msa0287410 | Msa0664950 | 0.814206 | 1.733837e-51 | -8.615850e-47 |
| Msa0302580 | Msa0664950 | -0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0315290 | Msa0664950 | 0.835475 | 1.642606e-56 | -8.615850e-47 |
| Msa0339620 | Msa0664950 | 0.809131 | 2.202273e-50 | -8.615850e-47 |
| Msa0344910 | Msa0664950 | 0.803265 | 3.786140e-49 | -8.615850e-47 |
| Msa0355220 | Msa0664950 | 0.802680 | 5.002011e-49 | -8.615850e-47 |
| Msa0484780 | Msa0664950 | 0.813888 | 2.037828e-51 | -8.615850e-47 |
| Msa0493000 | Msa0664950 | 0.801814 | 7.540676e-49 | -8.615850e-47 |
| Msa0493630 | Msa0664950 | 0.818370 | 2.030987e-52 | -8.615850e-47 |
| Msa0512750 | Msa0664950 | 0.801336 | 9.445836e-49 | -8.615850e-47 |
| Msa0512900 | Msa0664950 | 0.803880 | 2.822353e-49 | -8.615850e-47 |
| Msa0530940 | Msa0664950 | 0.819064 | 1.413038e-52 | -8.615850e-47 |
| Msa0536220 | Msa0664950 | 0.814428 | 1.548262e-51 | -8.615850e-47 |
| Msa0540070 | Msa0664950 | 0.803131 | 4.036394e-49 | -8.615850e-47 |
| Msa0542520 | Msa0664950 | 0.803537 | 3.324981e-49 | -8.615850e-47 |
| Msa0553460 | Msa0664950 | 0.811310 | 7.464322e-51 | -8.615850e-47 |
| Msa0554740 | Msa0664950 | 0.947816 | 3.218121e-106 | -8.615850e-47 |
| Msa0562440 | Msa0664950 | 0.838551 | 2.688541e-57 | -8.615850e-47 |
| Msa0585230 | Msa0664950 | 0.816666 | 4.916739e-52 | -8.615850e-47 |
| Msa0585700 | Msa0664950 | 0.828211 | 1.019968e-54 | -8.615850e-47 |
| Msa0594560 | Msa0664950 | 0.800366 | 1.490526e-48 | -8.615850e-47 |
| Msa0599890 | Msa0664950 | 0.833646 | 4.732924e-56 | -8.615850e-47 |
| Msa0602390 | Msa0664950 | 0.825972 | 3.501752e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664950 | MtrunA17_Chr4g0003031 | 89.428 | 577 | 18 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1002 |
| Msa0664950 | MtrunA17_Chr4g0064941 | 58.824 | 578 | 192 | 4 | 1 | 534 | 1 | 576 | 0.0 | 612 |
| Msa0664950 | MtrunA17_Chr8g0388071 | 28.941 | 425 | 244 | 12 | 89 | 458 | 61 | 482 | 1.04e-21 | 99.0 |
| Msa0664950 | MtrunA17_Chr8g0388071 | 25.791 | 411 | 267 | 9 | 144 | 521 | 67 | 472 | 1.59e-19 | 92.0 |
| Msa0664950 | MtrunA17_Chr4g0004901 | 26.994 | 489 | 277 | 20 | 83 | 507 | 170 | 642 | 4.07e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0664950 | AT1G15740.1 | 64.360 | 578 | 162 | 2 | 1 | 534 | 8 | 585 | 0.0 | 648 |
| Msa0664950 | AT4G23840.1 | 29.953 | 424 | 241 | 10 | 142 | 521 | 66 | 477 | 4.59e-25 | 109 |
Find 135 sgRNAs with CRISPR-Local
Find 654 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCTTGGATTCACTTTC+AGG | 0.068243 | 4_4:-4249189 | Msa0664950:intron |
| GTCACAGTAATTAAGATTTA+AGG | 0.141721 | 4_4:+4252276 | None:intergenic |
| ATCTCTGAAGTCTCTTAATT+TGG | 0.152359 | 4_4:-4246568 | Msa0664950:CDS |
| TGTAGTAAAGTCACTGATTT+TGG | 0.168024 | 4_4:-4249837 | Msa0664950:CDS |
| GCGTCTGATGTCACTGATTT+TGG | 0.168253 | 4_4:-4252334 | Msa0664950:CDS |
| GAAGCTTGCCCTCTTAAATT+TGG | 0.198047 | 4_4:-4249232 | Msa0664950:CDS |
| TTTCTTTAACAGGGTGAAAT+TGG | 0.215812 | 4_4:-4253410 | Msa0664950:intron |
| TTGTTAGTGACAGTGGTTTA+AGG | 0.217027 | 4_4:-4246608 | Msa0664950:CDS |
| GGCCGAAAGCTTACCAAGTT+TGG | 0.225156 | 4_4:+4244112 | None:intergenic |
| AAAATGTACATAGGCTAATA+TGG | 0.228544 | 4_4:-4244005 | Msa0664950:three_prime_UTR |
| CTCACTGACCTTGATTTGTT+TGG | 0.245633 | 4_4:-4245815 | Msa0664950:CDS |
| TTAAGCAGGATTGACAAAAT+TGG | 0.248392 | 4_4:-4247873 | Msa0664950:intron |
| CATAGGCTAATATGGCTTTA+TGG | 0.278147 | 4_4:-4243997 | Msa0664950:three_prime_UTR |
| CTTCTCTGGTCTTGTTAACT+TGG | 0.285104 | 4_4:-4250699 | Msa0664950:CDS |
| CCAGTCCAGCATCAGTAATT+TGG | 0.287315 | 4_4:+4246538 | None:intergenic |
| TCCGATATGAAGCCTTTATC+AGG | 0.299738 | 4_4:-4250331 | Msa0664950:intron |
| ATGGATTTACGCTTACAAAA+TGG | 0.306434 | 4_4:-4253169 | Msa0664950:CDS |
| AATGGCCTAGAGCATTTATC+AGG | 0.312464 | 4_4:-4247123 | Msa0664950:intron |
| TAACTTGGTCAAGTTGGATT+TGG | 0.325759 | 4_4:-4250684 | Msa0664950:CDS |
| CCAGTCCATGATCTGAAATT+TGG | 0.332242 | 4_4:+4252254 | None:intergenic |
| GAGAGATGTCCTGGGATTCA+TGG | 0.355408 | 4_4:-4250662 | Msa0664950:CDS |
| ATGCGGGTGTTGATGATTCT+TGG | 0.356326 | 4_4:-4252408 | Msa0664950:CDS |
| TTTGCTGATGCAGGTTTGAC+TGG | 0.365454 | 4_4:-4245839 | Msa0664950:intron |
| TCGGCCAGAGTAGTTGGTTT+GGG | 0.372202 | 4_4:-4244095 | Msa0664950:exon |
| GCCGAAAGCTTACCAAGTTT+GGG | 0.372680 | 4_4:+4244113 | None:intergenic |
| CGCTTCTTGTTGTAAGCAAA+TGG | 0.375086 | 4_4:+4254117 | None:intergenic |
| GATGGATGTCATCTCATCTC+AGG | 0.377784 | 4_4:-4252386 | Msa0664950:CDS |
| TCCCAAACTTGGTAAGCTTT+CGG | 0.381563 | 4_4:-4244114 | Msa0664950:CDS |
| TGAAACTTTGACAATCTTGA+AGG | 0.398173 | 4_4:+4252302 | None:intergenic |
| TTGGATTTGGAGAGATGTCC+TGG | 0.400413 | 4_4:-4250671 | Msa0664950:CDS |
| TTCGGCCAGAGTAGTTGGTT+TGG | 0.401434 | 4_4:-4244096 | Msa0664950:exon |
| AACCTTGATTCATGTAAGAT+TGG | 0.403335 | 4_4:-4247842 | Msa0664950:CDS |
| AGATGCAACAAACCTGATAA+AGG | 0.406288 | 4_4:+4250319 | None:intergenic |
| CCAAATTACTGATGCTGGAC+TGG | 0.409005 | 4_4:-4246538 | Msa0664950:CDS |
| TCTTGTAACATCTGCATGCT+TGG | 0.409080 | 4_4:-4249202 | Msa0664950:CDS |
| TCATTCTGCTAATTGTATGT+AGG | 0.423519 | 4_4:-4243917 | Msa0664950:three_prime_UTR |
| TCTTGTAGGATTGTCTAGTC+TGG | 0.424185 | 4_4:-4246655 | Msa0664950:intron |
| TATTTGCCAGGATCTATACT+TGG | 0.424458 | 4_4:-4252437 | Msa0664950:intron |
| TTTCTGACAGAGGGTGTGAT+AGG | 0.424800 | 4_4:-4248305 | Msa0664950:CDS |
| CAAGGAATGAGTGCCTTCTC+TGG | 0.429753 | 4_4:-4250713 | Msa0664950:CDS |
| GACACCCTTCCAAATTTAAG+AGG | 0.430139 | 4_4:+4249223 | None:intergenic |
| AATACTTGCATCACCTCTAC+TGG | 0.430709 | 4_4:-4244235 | Msa0664950:CDS |
| AAACTTGAGATCTCTGACAT+TGG | 0.434405 | 4_4:-4244188 | Msa0664950:CDS |
| TGTGACCAAATTTCAGATCA+TGG | 0.438486 | 4_4:-4252259 | Msa0664950:CDS |
| ATTAATTCACCTCCCAAACT+TGG | 0.439940 | 4_4:-4244125 | Msa0664950:CDS |
| ACCTGATAAAGGCTTCATAT+CGG | 0.443237 | 4_4:+4250330 | None:intergenic |
| AGATTCAAGTTTGACAGTGC+AGG | 0.445204 | 4_4:+4248342 | None:intergenic |
| TTCTTCTTCTGCAACTTCAC+CGG | 0.460122 | 4_4:-4254058 | Msa0664950:five_prime_UTR |
| AACAAGAAGCGTTCGGTGAT+CGG | 0.463164 | 4_4:-4254105 | Msa0664950:five_prime_UTR |
| TGACATGCTAGAAAAGCAAA+AGG | 0.467339 | 4_4:-4244038 | Msa0664950:three_prime_UTR |
| AAAGTTGAAAGTATTAAACT+TGG | 0.469983 | 4_4:-4248120 | Msa0664950:CDS |
| AAAACTGTGGAGTTAATTGC+TGG | 0.470627 | 4_4:-4245087 | Msa0664950:intron |
| ATTCAAGAATCTGAGGTCCT+TGG | 0.471185 | 4_4:-4245211 | Msa0664950:CDS |
| GCTTACCAAATTACTGATGC+TGG | 0.472779 | 4_4:-4246543 | Msa0664950:CDS |
| AGAAAGATCTACCGAGAGTA+AGG | 0.473864 | 4_4:+4252357 | None:intergenic |
| TCTTGTTAACTTGGTCAAGT+TGG | 0.476241 | 4_4:-4250690 | Msa0664950:CDS |
| TCAAGGAAATATTGCAAATG+TGG | 0.478014 | 4_4:-4253232 | Msa0664950:CDS |
| TGCTTACAACAAGAAGCGTT+CGG | 0.478414 | 4_4:-4254112 | Msa0664950:five_prime_UTR |
| ATCACAGAACAGCAACCTTA+CGG | 0.480947 | 4_4:-4245112 | Msa0664950:CDS |
| AAGCTTTCGGCCAGAGTAGT+TGG | 0.482355 | 4_4:-4244101 | Msa0664950:exon |
| GACATGCTAGAAAAGCAAAA+GGG | 0.483442 | 4_4:-4244037 | Msa0664950:three_prime_UTR |
| GAATTGTCTGATACTGAAGT+TGG | 0.487539 | 4_4:-4247150 | Msa0664950:CDS |
| CAAGGAAATATTGCAAATGT+GGG | 0.488242 | 4_4:-4253231 | Msa0664950:CDS |
| GCGCTAGGATCACAGATGTT+GGG | 0.491382 | 4_4:-4245793 | Msa0664950:CDS |
| TTTGGTTATTGAATGGATGA+TGG | 0.494307 | 4_4:-4253372 | Msa0664950:five_prime_UTR |
| ACCTTGATTTGTTTGGCGCT+AGG | 0.494505 | 4_4:-4245808 | Msa0664950:CDS |
| TCTGACATTGGAGTCATGTA+AGG | 0.499264 | 4_4:-4244176 | Msa0664950:CDS |
| TCATAAGCAATTGATCTGCT+TGG | 0.506112 | 4_4:-4247172 | Msa0664950:CDS |
| GGCGCTAGGATCACAGATGT+TGG | 0.508377 | 4_4:-4245794 | Msa0664950:CDS |
| TTCACTGTTGTTAGTGACAG+TGG | 0.508517 | 4_4:-4246615 | Msa0664950:CDS |
| AACTGTTACCGTGACATGAC+CGG | 0.509295 | 4_4:+4254039 | None:intergenic |
| CACCAATCTTACATGAATCA+AGG | 0.510275 | 4_4:+4247840 | None:intergenic |
| CGATGGGTGGTGCGTGTTCG+AGG | 0.511564 | 4_4:-4253297 | Msa0664950:CDS |
| AACGAGCCACGTCACATTCG+CGG | 0.514383 | 4_4:-4254237 | Msa0664950:five_prime_UTR |
| TGATGAAGGATTGGTGAACT+TGG | 0.515944 | 4_4:-4247819 | Msa0664950:CDS |
| GATTCAAGTTTGACAGTGCA+GGG | 0.517023 | 4_4:+4248343 | None:intergenic |
| CTTGCCCTCTTAAATTTGGA+AGG | 0.517960 | 4_4:-4249228 | Msa0664950:CDS |
| CATGGGAACACATACTTGCA+AGG | 0.524260 | 4_4:+4246511 | None:intergenic |
| GCAAATGTGGGAGTTTGAAA+TGG | 0.528018 | 4_4:-4253219 | Msa0664950:CDS |
| TCCTAGCGCCAAACAAATCA+AGG | 0.529517 | 4_4:+4245807 | None:intergenic |
| TCATGTAAGATTGGTGATGA+AGG | 0.532453 | 4_4:-4247833 | Msa0664950:CDS |
| GAAGGATTGGTGAACTTGGC+AGG | 0.535990 | 4_4:-4247815 | Msa0664950:intron |
| ATTTGCCAGGATCTATACTT+GGG | 0.536030 | 4_4:-4252436 | Msa0664950:intron |
| TCAAACCTGATAAATGCTCT+AGG | 0.548354 | 4_4:+4247118 | None:intergenic |
| AATGAAGATGTTCTTACTAG+AGG | 0.549524 | 4_4:-4253259 | Msa0664950:CDS |
| GTGTTCGAGGAAGCAAGAGC+GGG | 0.549694 | 4_4:-4253284 | Msa0664950:CDS |
| AATTTCAGGGCTCACCGCGT+TGG | 0.556274 | 4_4:-4244275 | Msa0664950:intron |
| AAGTTGAAAGTATTAAACTT+GGG | 0.557845 | 4_4:-4248119 | Msa0664950:CDS |
| TGGACAATGTCCGTCACTGT+TGG | 0.557874 | 4_4:-4253149 | Msa0664950:CDS |
| GCATGTTTAGCTCATTTGAA+AGG | 0.558223 | 4_4:-4248077 | Msa0664950:intron |
| GGCTAATATGGCTTTATGGA+AGG | 0.559217 | 4_4:-4243993 | Msa0664950:three_prime_UTR |
| ATGGGAACACATACTTGCAA+GGG | 0.563020 | 4_4:+4246512 | None:intergenic |
| CAAGTTAACAAGACCAGAGA+AGG | 0.565092 | 4_4:+4250700 | None:intergenic |
| TAAGATTGGTGATGAAGGAT+TGG | 0.567788 | 4_4:-4247828 | Msa0664950:CDS |
| GCGACCCAAACCAACTACTC+TGG | 0.568063 | 4_4:+4244091 | None:intergenic |
| GGTTATTGAATGGATGATGG+TGG | 0.571252 | 4_4:-4253369 | Msa0664950:five_prime_UTR |
| GTAATAAGAGTGGCGTGAAG+TGG | 0.572085 | 4_4:+4254188 | None:intergenic |
| AGCGGTGGATTGACTGATGC+TGG | 0.575698 | 4_4:-4245180 | Msa0664950:CDS |
| TTGCCCTCTTAAATTTGGAA+GGG | 0.576199 | 4_4:-4249227 | Msa0664950:CDS |
| AACTTGGGATTTAATGACAT+AGG | 0.577016 | 4_4:-4248104 | Msa0664950:CDS |
| TCAGGGTTCATCCTTACTCT+CGG | 0.578819 | 4_4:-4252368 | Msa0664950:CDS |
| AATGATTCAATATCTGCTCA+AGG | 0.581564 | 4_4:-4250731 | Msa0664950:CDS |
| CCAAATTTCAGATCATGGAC+TGG | 0.582601 | 4_4:-4252254 | Msa0664950:CDS |
| CTATACTTGGGAGAATATGC+GGG | 0.584538 | 4_4:-4252424 | Msa0664950:CDS |
| AAACAGAATTCAAGAATCTG+AGG | 0.586780 | 4_4:-4245218 | Msa0664950:intron |
| CAAATGCTGCAGTCCAGTAG+AGG | 0.586938 | 4_4:+4244222 | None:intergenic |
| ATGGATGTCATCTCATCTCA+GGG | 0.587599 | 4_4:-4252385 | Msa0664950:CDS |
| GATGTAAAAGAATGATGTAA+AGG | 0.588609 | 4_4:-4243870 | Msa0664950:three_prime_UTR |
| ACAGTGCCTCCATGAATCCC+AGG | 0.590376 | 4_4:+4250653 | None:intergenic |
| TGGATTTGGAGAGATGTCCT+GGG | 0.594319 | 4_4:-4250670 | Msa0664950:CDS |
| TCTATACTTGGGAGAATATG+CGG | 0.596739 | 4_4:-4252425 | Msa0664950:CDS |
| CGTGTTCGAGGAAGCAAGAG+CGG | 0.602614 | 4_4:-4253285 | Msa0664950:CDS |
| ACACCCTTCCAAATTTAAGA+GGG | 0.605875 | 4_4:+4249224 | None:intergenic |
| GATGCAATATTTCTGACAGA+GGG | 0.606799 | 4_4:-4248314 | Msa0664950:CDS |
| CAACTTCACCGGTCATGTCA+CGG | 0.609269 | 4_4:-4254047 | Msa0664950:intron |
| TGTAAGCGTAAATCCATGGA+CGG | 0.611321 | 4_4:+4253175 | None:intergenic |
| TGGAATCTCTCAATATGAAG+TGG | 0.616270 | 4_4:-4250372 | Msa0664950:CDS |
| TCCACCGCTGCATATTTCCA+AGG | 0.622364 | 4_4:+4245194 | None:intergenic |
| CATGGACTGGAGTGTATCAG+TGG | 0.628538 | 4_4:-4252241 | Msa0664950:intron |
| GATACTGAAGTTGGAAACAA+TGG | 0.628892 | 4_4:-4247141 | Msa0664950:CDS |
| AATGTGGGAGTTTGAAATGG+TGG | 0.629760 | 4_4:-4253216 | Msa0664950:CDS |
| TCCTTGGAAATATGCAGCGG+TGG | 0.643300 | 4_4:-4245195 | Msa0664950:CDS |
| ACACACAAGTCCAACAGTGA+CGG | 0.643962 | 4_4:+4253139 | None:intergenic |
| ACTGTCACTAACAACAGTGA+AGG | 0.649551 | 4_4:+4246617 | None:intergenic |
| ACATGCTAGAAAAGCAAAAG+GGG | 0.650544 | 4_4:-4244036 | Msa0664950:three_prime_UTR |
| GGGTGTTGATGATTCTTGGA+TGG | 0.654279 | 4_4:-4252404 | Msa0664950:CDS |
| AGATGCAATATTTCTGACAG+AGG | 0.657280 | 4_4:-4248315 | Msa0664950:CDS |
| GAAAGCTTACCAAGTTTGGG+AGG | 0.672757 | 4_4:+4244116 | None:intergenic |
| CAACCTTACGGACAAAACTG+TGG | 0.677276 | 4_4:-4245100 | Msa0664950:CDS |
| GTGTGTCCAGAAAATAAGTG+AGG | 0.686168 | 4_4:-4253122 | Msa0664950:intron |
| AGGTCCTTGGAAATATGCAG+CGG | 0.704864 | 4_4:-4245198 | Msa0664950:CDS |
| AGATGTCCTGGGATTCATGG+AGG | 0.711361 | 4_4:-4250659 | Msa0664950:CDS |
| AGTGGTTTAAGGAAATTGTG+TGG | 0.713167 | 4_4:-4246597 | Msa0664950:CDS |
| CAAACAAATCAAGGTCAGTG+AGG | 0.728596 | 4_4:+4245816 | None:intergenic |
| AAGATTCAAAGAAACCAACG+CGG | 0.845026 | 4_4:+4244261 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAATTAATTTGTAAATTT+TGG | - | chr4_4:4244283-4244302 | Msa0664950:intron | 10.0% |
| !!! | TATTTAATTTTTTTTTTTCC+AGG | + | chr4_4:4245370-4245389 | None:intergenic | 10.0% |
| !!! | TGATTTTATATTAATTTTGA+AGG | + | chr4_4:4254226-4254245 | None:intergenic | 10.0% |
| !!! | TTATGTTACTTTTTTATTCT+CGG | - | chr4_4:4244229-4244248 | Msa0664950:CDS | 15.0% |
| !! | TTAAGAGTTATTATTATGTT+CGG | - | chr4_4:4244367-4244386 | Msa0664950:intron | 15.0% |
| !! | ATATCTTATGAAATTGATTA+TGG | + | chr4_4:4244529-4244548 | None:intergenic | 15.0% |
| !!! | ATAATCTTTTTTTCTTTAAC+AGG | - | chr4_4:4244637-4244656 | Msa0664950:intron | 15.0% |
| !!! | TAATCTTTTTTTCTTTAACA+GGG | - | chr4_4:4244638-4244657 | Msa0664950:intron | 15.0% |
| !!! | TCAGCAAATTTTAAATAATT+TGG | - | chr4_4:4245087-4245106 | Msa0664950:intron | 15.0% |
| !!! | ATTTTAAAGGTATATTATCA+AGG | + | chr4_4:4246025-4246044 | None:intergenic | 15.0% |
| !!! | TACCTTTAAAAAAAAAATCT+TGG | - | chr4_4:4246118-4246137 | Msa0664950:intron | 15.0% |
| !!! | TTCCAAGATTTTTTTTTTAA+AGG | + | chr4_4:4246123-4246142 | None:intergenic | 15.0% |
| !! | TCAAATATCAAATGTAATAA+AGG | + | chr4_4:4246176-4246195 | None:intergenic | 15.0% |
| !! | TGTTAAAATATTTCCAAATT+GGG | + | chr4_4:4246785-4246804 | None:intergenic | 15.0% |
| !! | TTGTTAAAATATTTCCAAAT+TGG | + | chr4_4:4246786-4246805 | None:intergenic | 15.0% |
| !! | TAAATTAGAACAAAGTTTAA+AGG | + | chr4_4:4246940-4246959 | None:intergenic | 15.0% |
| !! | ATTATGTTAAATTGGATTAA+TGG | + | chr4_4:4247066-4247085 | None:intergenic | 15.0% |
| !! | ATTCTTAGAAAATATTACTA+AGG | - | chr4_4:4248654-4248673 | Msa0664950:intron | 15.0% |
| !! | AACTTAAGTAAGAAAAATAT+CGG | - | chr4_4:4249150-4249169 | Msa0664950:intron | 15.0% |
| !!! | TTCATTTAAATTAGTTTTCT+CGG | - | chr4_4:4249225-4249244 | Msa0664950:CDS | 15.0% |
| !!! | AAAATTTTGTTTCCAATATT+GGG | - | chr4_4:4249295-4249314 | Msa0664950:intron | 15.0% |
| !! | TAATGCTAATAAAAAAGAAA+AGG | + | chr4_4:4249351-4249370 | None:intergenic | 15.0% |
| !! | GTATAATTACATAATTTACA+GGG | - | chr4_4:4249819-4249838 | Msa0664950:intron | 15.0% |
| !! | AAAATAGAAATTGATAGATT+AGG | - | chr4_4:4250332-4250351 | Msa0664950:CDS | 15.0% |
| !! | TTTAAAAAAAAAATGTAAGC+TGG | - | chr4_4:4250742-4250761 | Msa0664950:CDS | 15.0% |
| !!! | AATCTAAAGAATGATTTTAT+TGG | - | chr4_4:4250810-4250829 | Msa0664950:intron | 15.0% |
| !! | TTGAATTGTAAATATTTCAT+GGG | + | chr4_4:4251566-4251585 | None:intergenic | 15.0% |
| !! | TTTGAATTGTAAATATTTCA+TGG | + | chr4_4:4251567-4251586 | None:intergenic | 15.0% |
| !! | AATATTTACAATTCAAAGAA+TGG | - | chr4_4:4251570-4251589 | Msa0664950:intron | 15.0% |
| !! | AACATTCAAAAAAAAAGAAA+AGG | + | chr4_4:4251642-4251661 | None:intergenic | 15.0% |
| !! | AAAAAAATATGAAAAGAATG+TGG | - | chr4_4:4251978-4251997 | Msa0664950:intron | 15.0% |
| !! | ACAATTATTAAGATTGAATT+TGG | + | chr4_4:4252713-4252732 | None:intergenic | 15.0% |
| !! | AAATTCAATCTTAATAATTG+TGG | - | chr4_4:4252712-4252731 | Msa0664950:intron | 15.0% |
| !!! | TATATATACTTTTAAGCTAT+TGG | + | chr4_4:4253619-4253638 | None:intergenic | 15.0% |
| !!! | TAGCTTAAAAGTATATATAT+AGG | - | chr4_4:4253620-4253639 | Msa0664950:intron | 15.0% |
| !! | AAAAATACCAATAAAATGTA+GGG | + | chr4_4:4253676-4253695 | None:intergenic | 15.0% |
| !! | AAGAAAAATTGTAATAAGAG+TGG | + | chr4_4:4243882-4243901 | None:intergenic | 20.0% |
| !!! | ATTCATTTTTGGTTATTGAA+TGG | - | chr4_4:4244678-4244697 | Msa0664950:intron | 20.0% |
| !! | GAATAAAATATACAACAAAG+AGG | + | chr4_4:4245929-4245948 | None:intergenic | 20.0% |
| !!! | GTATGCTAGATTAATTTTAA+AGG | + | chr4_4:4246038-4246057 | None:intergenic | 20.0% |
| !! | TTTAGATATTTATCCATTGT+TGG | - | chr4_4:4246833-4246852 | Msa0664950:intron | 20.0% |
| !! | TACTGAAATTAAGTAGAAAT+AGG | + | chr4_4:4246863-4246882 | None:intergenic | 20.0% |
| !! | TCTACTTAATTTCAGTAATA+TGG | - | chr4_4:4246866-4246885 | Msa0664950:intron | 20.0% |
| !! | GAGATTTCATTATGTTAAAT+TGG | + | chr4_4:4247074-4247093 | None:intergenic | 20.0% |
| !! | TATATGTAATGTAATATTCC+AGG | - | chr4_4:4247269-4247288 | Msa0664950:intron | 20.0% |
| !!! | AAACTTTTTTGTTTACACAA+AGG | + | chr4_4:4247458-4247477 | None:intergenic | 20.0% |
| !!! | AGTTATGAAGAAATCAATTT+TGG | + | chr4_4:4247622-4247641 | None:intergenic | 20.0% |
| !! | ATAACTTCAATCAAACTATT+TGG | - | chr4_4:4247636-4247655 | Msa0664950:intron | 20.0% |
| !! | ACTTAAGTAAGAAAAATATC+GGG | - | chr4_4:4249151-4249170 | Msa0664950:intron | 20.0% |
| !!! | TCATTTAAATTAGTTTTCTC+GGG | - | chr4_4:4249226-4249245 | Msa0664950:CDS | 20.0% |
| !!! | CAATATTGGAAACAAAATTT+TGG | + | chr4_4:4249296-4249315 | None:intergenic | 20.0% |
| !!! | CAAAATTTTGTTTCCAATAT+TGG | - | chr4_4:4249294-4249313 | Msa0664950:intron | 20.0% |
| !!! | AAATTTTGTTTCCAATATTG+GGG | - | chr4_4:4249296-4249315 | Msa0664950:intron | 20.0% |
| !! | TATTAAATCAAAACTCCAAT+GGG | + | chr4_4:4249671-4249690 | None:intergenic | 20.0% |
| !! | ATATTAAATCAAAACTCCAA+TGG | + | chr4_4:4249672-4249691 | None:intergenic | 20.0% |
| !! | GGTATAATTACATAATTTAC+AGG | - | chr4_4:4249818-4249837 | Msa0664950:intron | 20.0% |
| !!! | AAAGTTGAAAGTATTAAACT+TGG | - | chr4_4:4249937-4249956 | Msa0664950:intron | 20.0% |
| !!! | AAGTTGAAAGTATTAAACTT+GGG | - | chr4_4:4249938-4249957 | Msa0664950:intron | 20.0% |
| !! | ATAGGAATTGTATTTGAAAA+TGG | - | chr4_4:4250130-4250149 | Msa0664950:intron | 20.0% |
| !!! | ACTTATGTATATTTTTAAGC+AGG | - | chr4_4:4250170-4250189 | Msa0664950:intron | 20.0% |
| !! | TAGAAAGCAATATAGAAATA+CGG | - | chr4_4:4250441-4250460 | Msa0664950:intron | 20.0% |
| !! | AAGAAAGAAATTTATTGTCT+GGG | + | chr4_4:4250579-4250598 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAATTTATTGTC+TGG | + | chr4_4:4250580-4250599 | None:intergenic | 20.0% |
| !! | ATACATTATGTTTGGATTAA+TGG | + | chr4_4:4250688-4250707 | None:intergenic | 20.0% |
| !! | TTAATCCAAACATAATGTAT+TGG | - | chr4_4:4250688-4250707 | Msa0664950:CDS | 20.0% |
| !!! | TTTTATATTCCATTTCTTGT+AGG | - | chr4_4:4251388-4251407 | Msa0664950:intron | 20.0% |
| !!! | CTTTTTTTTTGAATGTTGAA+TGG | - | chr4_4:4251645-4251664 | Msa0664950:intron | 20.0% |
| !!! | TAAATATTTACTTCCTTTTC+CGG | - | chr4_4:4251693-4251712 | Msa0664950:intron | 20.0% |
| !!! | AGGTATAAAATCATATTTTC+AGG | - | chr4_4:4251839-4251858 | Msa0664950:intron | 20.0% |
| !! | TATAAAATTACCTGTGTAAT+AGG | + | chr4_4:4251883-4251902 | None:intergenic | 20.0% |
| !!! | AAACAATTTATGAGTTTGTT+TGG | - | chr4_4:4251910-4251929 | Msa0664950:intron | 20.0% |
| !! | AAATTCAAATAATTTATCCC+AGG | + | chr4_4:4252129-4252148 | None:intergenic | 20.0% |
| !! | AGCAAACAAAAATAAGTAAA+AGG | + | chr4_4:4252399-4252418 | None:intergenic | 20.0% |
| !! | ATAAAAAAGCTGAAATATGT+TGG | - | chr4_4:4252424-4252443 | Msa0664950:CDS | 20.0% |
| !!! | AATGTGAAAAAGAAGTTTTA+AGG | - | chr4_4:4253092-4253111 | Msa0664950:intron | 20.0% |
| !! | ATAGATTCATTCAAATTAGT+CGG | - | chr4_4:4253218-4253237 | Msa0664950:CDS | 20.0% |
| !!! | ATTTCTTATTCTTTAGGAAA+AGG | - | chr4_4:4253532-4253551 | Msa0664950:intron | 20.0% |
| !!! | TTTCTTATTCTTTAGGAAAA+GGG | - | chr4_4:4253533-4253552 | Msa0664950:intron | 20.0% |
| !! | AAAATACCAATAAAATGTAG+GGG | + | chr4_4:4253675-4253694 | None:intergenic | 20.0% |
| !! | GAAAAATACCAATAAAATGT+AGG | + | chr4_4:4253677-4253696 | None:intergenic | 20.0% |
| !!! | GACAATTTTAAAATGTACAT+AGG | - | chr4_4:4254043-4254062 | Msa0664950:intron | 20.0% |
| ! | AAAGAAAAAAGCTAAAACAC+CGG | + | chr4_4:4244096-4244115 | None:intergenic | 25.0% |
| !!! | TTAGCTTTTTTCTTTCTATG+TGG | - | chr4_4:4244101-4244120 | Msa0664950:exon | 25.0% |
| !!! | TTTAAATTTTGGAGTTTCTG+CGG | - | chr4_4:4244204-4244223 | Msa0664950:CDS | 25.0% |
| !! | TGGTTTCATGTATTCATTTT+TGG | - | chr4_4:4244667-4244686 | Msa0664950:intron | 25.0% |
| !! | TTACTAGAATATTTTGTCGA+TGG | - | chr4_4:4244743-4244762 | Msa0664950:intron | 25.0% |
| !! | TACTAGAATATTTTGTCGAT+GGG | - | chr4_4:4244744-4244763 | Msa0664950:intron | 25.0% |
| !! | TTTTTCCAGGTATTATGATA+GGG | + | chr4_4:4245357-4245376 | None:intergenic | 25.0% |
| !!! | TTTTTTCCAGGTATTATGAT+AGG | + | chr4_4:4245358-4245377 | None:intergenic | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+TGG | + | chr4_4:4245446-4245465 | None:intergenic | 25.0% |
| ! | CTTATTGAATTTGTAGTGTT+TGG | + | chr4_4:4245458-4245477 | None:intergenic | 25.0% |
| ! | GTCACAGTAATTAAGATTTA+AGG | + | chr4_4:4245784-4245803 | None:intergenic | 25.0% |
| !! | CAATGGTATTTGTGTATTTT+AGG | + | chr4_4:4246444-4246463 | None:intergenic | 25.0% |
| ! | ATTGTACTTGCAAAAAAGTA+CGG | + | chr4_4:4246597-4246616 | None:intergenic | 25.0% |
| ! | GTACAATATTATTATGCACT+TGG | - | chr4_4:4246610-4246629 | Msa0664950:CDS | 25.0% |
| ! | TTGTTGTATCACCAATTATT+TGG | - | chr4_4:4246747-4246766 | Msa0664950:intron | 25.0% |
| ! | TGTTGTATCACCAATTATTT+GGG | - | chr4_4:4246748-4246767 | Msa0664950:intron | 25.0% |
| ! | AATTAACCATCCCAAATAAT+TGG | + | chr4_4:4246761-4246780 | None:intergenic | 25.0% |
| ! | ATCTGCATAAGATTTCAATA+TGG | + | chr4_4:4246899-4246918 | None:intergenic | 25.0% |
| !!! | TTATTTTTCCATTATCACGA+AGG | - | chr4_4:4247018-4247037 | Msa0664950:intron | 25.0% |
| !! | GTTAAATTGGATTAATGGAT+GGG | + | chr4_4:4247061-4247080 | None:intergenic | 25.0% |
| ! | TGTTAAATTGGATTAATGGA+TGG | + | chr4_4:4247062-4247081 | None:intergenic | 25.0% |
| ! | ATAATGAAATCTCCATAGTA+AGG | - | chr4_4:4247081-4247100 | Msa0664950:intron | 25.0% |
| ! | AAAACTATTTCACCTTACTA+TGG | + | chr4_4:4247096-4247115 | None:intergenic | 25.0% |
| ! | AACAATGCTATGTAACAAAA+AGG | + | chr4_4:4247167-4247186 | None:intergenic | 25.0% |
| ! | TTTGAAGGTTGTATAATAAC+TGG | + | chr4_4:4247516-4247535 | None:intergenic | 25.0% |
| !!! | CTATTTGGTTCATATTTTTC+AGG | - | chr4_4:4247651-4247670 | Msa0664950:intron | 25.0% |
| ! | AAGAAGACAATAACCTAAAT+AGG | + | chr4_4:4247861-4247880 | None:intergenic | 25.0% |
| !! | ATTGTCTTACACTAGTTTAT+AGG | - | chr4_4:4248316-4248335 | Msa0664950:CDS | 25.0% |
| !!! | ATGTTTAGCTTGAAACAAAA+AGG | - | chr4_4:4248407-4248426 | Msa0664950:intron | 25.0% |
| !! | GATATTTCAAATTTGCTTTC+TGG | + | chr4_4:4248633-4248652 | None:intergenic | 25.0% |
| ! | ATAGGCTTAAAATTCTATGA+AGG | + | chr4_4:4248901-4248920 | None:intergenic | 25.0% |
| !! | ATAGAATTTTAAGCCTATTC+TGG | - | chr4_4:4248903-4248922 | Msa0664950:intron | 25.0% |
| ! | CATAACAAAATAACCAGAAT+AGG | + | chr4_4:4248919-4248938 | None:intergenic | 25.0% |
| ! | AATTGCACTAAATTCTTGTT+AGG | - | chr4_4:4248954-4248973 | Msa0664950:intron | 25.0% |
| ! | CTTAAGTAAGAAAAATATCG+GGG | - | chr4_4:4249152-4249171 | Msa0664950:intron | 25.0% |
| ! | TTAAGTAAGAAAAATATCGG+GGG | - | chr4_4:4249153-4249172 | Msa0664950:intron | 25.0% |
| ! | TTGTCATAGAAATATTTGTG+TGG | - | chr4_4:4249189-4249208 | Msa0664950:intron | 25.0% |
| ! | AATACTGTATGGACAATATT+GGG | + | chr4_4:4249326-4249345 | None:intergenic | 25.0% |
| ! | TAATACTGTATGGACAATAT+TGG | + | chr4_4:4249327-4249346 | None:intergenic | 25.0% |
| ! | AAGAAAAGGTTAATACTGTA+TGG | + | chr4_4:4249337-4249356 | None:intergenic | 25.0% |
| ! | TGGCATATAATAACTTAATG+AGG | - | chr4_4:4249637-4249656 | Msa0664950:intron | 25.0% |
| !!! | ATTCTAAAGCTAATTCTTTC+AGG | - | chr4_4:4249796-4249815 | Msa0664950:intron | 25.0% |
| !!! | TTCTAAAGCTAATTCTTTCA+GGG | - | chr4_4:4249797-4249816 | Msa0664950:intron | 25.0% |
| ! | ACAAACTACTGGTAAAATAA+CGG | - | chr4_4:4250071-4250090 | Msa0664950:intron | 25.0% |
| ! | GAAGAAATAGGAATAGAAAT+GGG | + | chr4_4:4250654-4250673 | None:intergenic | 25.0% |
| !!! | ATGTTTGGATTAATGGATTT+GGG | + | chr4_4:4250681-4250700 | None:intergenic | 25.0% |
| !!! | TATGTTTGGATTAATGGATT+TGG | + | chr4_4:4250682-4250701 | None:intergenic | 25.0% |
| !!! | TTTCTGATCATTTTTCCTAT+TGG | - | chr4_4:4251090-4251109 | Msa0664950:intron | 25.0% |
| !!! | TTCTGATCATTTTTCCTATT+GGG | - | chr4_4:4251091-4251110 | Msa0664950:intron | 25.0% |
| ! | CTTGTGATTATAAAGTAACA+AGG | + | chr4_4:4251200-4251219 | None:intergenic | 25.0% |
| ! | CATAAACTAATCTCTTGAAA+TGG | - | chr4_4:4251233-4251252 | Msa0664950:intron | 25.0% |
| !! | AAATATTTACTTCCTTTTCC+GGG | - | chr4_4:4251694-4251713 | Msa0664950:intron | 25.0% |
| !! | ATGATTTTATACCTTGAAAC+AGG | + | chr4_4:4251833-4251852 | None:intergenic | 25.0% |
| !! | TATTTGAAAAGTATGCAACA+TGG | - | chr4_4:4252293-4252312 | Msa0664950:CDS | 25.0% |
| !! | ACATATTGACTACATTTATG+TGG | - | chr4_4:4252355-4252374 | Msa0664950:CDS | 25.0% |
| ! | AAAATAAGTAAAAGGCCAAA+CGG | + | chr4_4:4252391-4252410 | None:intergenic | 25.0% |
| !!! | ATTAATGGTTTTACATGAGA+CGG | + | chr4_4:4252632-4252651 | None:intergenic | 25.0% |
| !!! | GCAGTTAATTTTAAAGAACT+TGG | + | chr4_4:4252742-4252761 | None:intergenic | 25.0% |
| !! | TTAATTGCTGGTAATTTTGT+GGG | - | chr4_4:4252982-4253001 | Msa0664950:intron | 25.0% |
| !! | TTAATTGATGCTTTTCGTTA+AGG | - | chr4_4:4253134-4253153 | Msa0664950:CDS | 25.0% |
| ! | TAGATTCATTCAAATTAGTC+GGG | - | chr4_4:4253219-4253238 | Msa0664950:CDS | 25.0% |
| !! | TTTTAACAACTCAGCTAAAA+AGG | + | chr4_4:4253439-4253458 | None:intergenic | 25.0% |
| !! | TGTTAAAAGTTTAGTTTCTC+CGG | - | chr4_4:4253451-4253470 | Msa0664950:intron | 25.0% |
| ! | ATGTAAGTGTAACATTGAAT+GGG | + | chr4_4:4253497-4253516 | None:intergenic | 25.0% |
| ! | AATGTAAGTGTAACATTGAA+TGG | + | chr4_4:4253498-4253517 | None:intergenic | 25.0% |
| ! | GTAGACATTTCTTATTCTTT+AGG | - | chr4_4:4253526-4253545 | Msa0664950:intron | 25.0% |
| !! | TTCTTATTCTTTAGGAAAAG+GGG | - | chr4_4:4253534-4253553 | Msa0664950:intron | 25.0% |
| !! | TACTTTTAAGCTATTGGAAA+TGG | + | chr4_4:4253613-4253632 | None:intergenic | 25.0% |
| !! | AAAAGTATATATATAGGTCC+TGG | - | chr4_4:4253626-4253645 | Msa0664950:intron | 25.0% |
| !! | AAATTTCCCCTACATTTTAT+TGG | - | chr4_4:4253666-4253685 | Msa0664950:intron | 25.0% |
| ! | AAAATGTACATAGGCTAATA+TGG | - | chr4_4:4254052-4254071 | Msa0664950:five_prime_UTR | 25.0% |
| ! | GATGTAAAAGAATGATGTAA+AGG | - | chr4_4:4254187-4254206 | Msa0664950:five_prime_UTR | 25.0% |
| !!! | GGATTATCCTGATTTTTTTC+CGG | - | chr4_4:4244074-4244093 | Msa0664950:three_prime_UTR | 30.0% |
| TAAAACACCGGAAAAAAATC+AGG | + | chr4_4:4244084-4244103 | None:intergenic | 30.0% | |
| TTATGGTTCATCTTACTAAG+AGG | + | chr4_4:4244512-4244531 | None:intergenic | 30.0% | |
| TTTCTTTAACAGGGTGAAAT+TGG | - | chr4_4:4244647-4244666 | Msa0664950:intron | 30.0% | |
| TTTGGTTATTGAATGGATGA+TGG | - | chr4_4:4244685-4244704 | Msa0664950:intron | 30.0% | |
| AATGAAGATGTTCTTACTAG+AGG | - | chr4_4:4244798-4244817 | Msa0664950:intron | 30.0% | |
| ! | TTCTTACTAGAGGATTTTCA+AGG | - | chr4_4:4244808-4244827 | Msa0664950:intron | 30.0% |
| TCAAGGAAATATTGCAAATG+TGG | - | chr4_4:4244825-4244844 | Msa0664950:intron | 30.0% | |
| CAAGGAAATATTGCAAATGT+GGG | - | chr4_4:4244826-4244845 | Msa0664950:intron | 30.0% | |
| ! | ATTTTGTAAGCGTAAATCCA+TGG | + | chr4_4:4244889-4244908 | None:intergenic | 30.0% |
| ATGGATTTACGCTTACAAAA+TGG | - | chr4_4:4244888-4244907 | Msa0664950:intron | 30.0% | |
| !! | ACAATACCTCACTTATTTTC+TGG | + | chr4_4:4244944-4244963 | None:intergenic | 30.0% |
| TAAATCATATAGGCTCTGTT+TGG | - | chr4_4:4245170-4245189 | Msa0664950:CDS | 30.0% | |
| TAAGTCATACACTCAAAATG+TGG | + | chr4_4:4245201-4245220 | None:intergenic | 30.0% | |
| ATGACAAAAAAAGACTCGTT+TGG | - | chr4_4:4245237-4245256 | Msa0664950:intron | 30.0% | |
| ! | TTTTCCAGGTATTATGATAG+GGG | + | chr4_4:4245356-4245375 | None:intergenic | 30.0% |
| CATACGATCAATTATGAACT+TGG | - | chr4_4:4245555-4245574 | Msa0664950:intron | 30.0% | |
| TCATATATCTTCGATCTAAG+TGG | - | chr4_4:4245583-4245602 | Msa0664950:intron | 30.0% | |
| !! | AGTTTTATCTCTTATTTGCC+AGG | - | chr4_4:4245608-4245627 | Msa0664950:intron | 30.0% |
| TGAAACTTTGACAATCTTGA+AGG | + | chr4_4:4245758-4245777 | None:intergenic | 30.0% | |
| CATAACAAAGACAAAATTGC+AGG | + | chr4_4:4245855-4245874 | None:intergenic | 30.0% | |
| ! | CTGCAATTTTGTCTTTGTTA+TGG | - | chr4_4:4245853-4245872 | Msa0664950:intron | 30.0% |
| ACCGTCATAATATTCCTAAA+AGG | - | chr4_4:4246297-4246316 | Msa0664950:intron | 30.0% | |
| !! | GCCTTTTAGGAATATTATGA+CGG | + | chr4_4:4246301-4246320 | None:intergenic | 30.0% |
| !! | TGGTATTTGTGTATTTTAGG+CGG | + | chr4_4:4246441-4246460 | None:intergenic | 30.0% |
| GGGTTTAATATCGTATTCTA+GGG | + | chr4_4:4246562-4246581 | None:intergenic | 30.0% | |
| AGGGTTTAATATCGTATTCT+AGG | + | chr4_4:4246563-4246582 | None:intergenic | 30.0% | |
| CACTTGGATTTAGAAGTAAT+TGG | - | chr4_4:4246626-4246645 | Msa0664950:CDS | 30.0% | |
| AAAATAGAGAAAACTACGTG+AGG | + | chr4_4:4246814-4246833 | None:intergenic | 30.0% | |
| ! | TGGACGTGATATATTGATTA+CGG | + | chr4_4:4246964-4246983 | None:intergenic | 30.0% |
| CTATCCAGAATTTCATTCTT+TGG | + | chr4_4:4246984-4247003 | None:intergenic | 30.0% | |
| ACATTCAATGAATAACATCG+AGG | - | chr4_4:4247119-4247138 | Msa0664950:intron | 30.0% | |
| AATGATTCAATATCTGCTCA+AGG | - | chr4_4:4247326-4247345 | Msa0664950:intron | 30.0% | |
| TGAAGTTCATCAAAGAACAT+TGG | + | chr4_4:4247487-4247506 | None:intergenic | 30.0% | |
| TTGTCTGAAAAGTAAAGCTT+TGG | - | chr4_4:4247556-4247575 | Msa0664950:intron | 30.0% | |
| TGTCTGAAAAGTAAAGCTTT+GGG | - | chr4_4:4247557-4247576 | Msa0664950:intron | 30.0% | |
| !!! | TTTTTCAGGTCTAACTAAGT+TGG | - | chr4_4:4247665-4247684 | Msa0664950:intron | 30.0% |
| !! | ACAAAGCATTGGTAAATTTC+TGG | + | chr4_4:4247787-4247806 | None:intergenic | 30.0% |
| AAATCTCGAAAACAAAGCAT+TGG | + | chr4_4:4247798-4247817 | None:intergenic | 30.0% | |
| ! | GAGATTTTCTTCTATGATGT+TGG | - | chr4_4:4247811-4247830 | Msa0664950:intron | 30.0% |
| AAATAGGAACTATTCAGTAG+TGG | + | chr4_4:4247845-4247864 | None:intergenic | 30.0% | |
| CTACTGAATAGTTCCTATTT+AGG | - | chr4_4:4247845-4247864 | Msa0664950:CDS | 30.0% | |
| TTGTCATCTTCTTAGACATA+TGG | - | chr4_4:4248029-4248048 | Msa0664950:intron | 30.0% | |
| !!! | TGTAGTAAAGTCACTGATTT+TGG | - | chr4_4:4248220-4248239 | Msa0664950:intron | 30.0% |
| AGATAGTTCAGTTGAAGATT+CGG | + | chr4_4:4248440-4248459 | None:intergenic | 30.0% | |
| ACCAATGATTTGAAGGTAAT+AGG | + | chr4_4:4248690-4248709 | None:intergenic | 30.0% | |
| ATTTCCTTTAACAGGTAAAG+AGG | + | chr4_4:4248730-4248749 | None:intergenic | 30.0% | |
| TACCTGTTAAAGGAAATTTC+AGG | - | chr4_4:4248733-4248752 | Msa0664950:intron | 30.0% | |
| AACCTGAAATTTCCTTTAAC+AGG | + | chr4_4:4248738-4248757 | None:intergenic | 30.0% | |
| AACCAAGACAACATTGAAAA+CGG | + | chr4_4:4248790-4248809 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTCCCTTTCTTCAC+TGG | - | chr4_4:4249029-4249048 | Msa0664950:intron | 30.0% |
| AAGCTGAAACACTGTTTAAT+AGG | - | chr4_4:4249070-4249089 | Msa0664950:intron | 30.0% | |
| !!! | TTTAAATTAGTTTTCTCGGG+TGG | - | chr4_4:4249229-4249248 | Msa0664950:CDS | 30.0% |
| !!! | TTAAATTAGTTTTCTCGGGT+GGG | - | chr4_4:4249230-4249249 | Msa0664950:CDS | 30.0% |
| !! | TTCGTAAAAGCATTAAGGTT+TGG | + | chr4_4:4249268-4249287 | None:intergenic | 30.0% |
| ! | AACCTTAATGCTTTTACGAA+AGG | - | chr4_4:4249268-4249287 | Msa0664950:intron | 30.0% |
| !! | TTCCTTTCGTAAAAGCATTA+AGG | + | chr4_4:4249273-4249292 | None:intergenic | 30.0% |
| ATACTGTATGGACAATATTG+GGG | + | chr4_4:4249325-4249344 | None:intergenic | 30.0% | |
| GTAACTTAATGATGTCTTTC+TGG | - | chr4_4:4249617-4249636 | Msa0664950:intron | 30.0% | |
| ! | ATAATTTACAGGGTGCTTAT+TGG | - | chr4_4:4249829-4249848 | Msa0664950:CDS | 30.0% |
| ! | TAATTTACAGGGTGCTTATT+GGG | - | chr4_4:4249830-4249849 | Msa0664950:CDS | 30.0% |
| !!! | TGGGATCTACATTTTGTTTT+TGG | - | chr4_4:4249849-4249868 | Msa0664950:CDS | 30.0% |
| CATTCCTACAATAACTGTTA+CGG | + | chr4_4:4249877-4249896 | None:intergenic | 30.0% | |
| AGTTATTGTAGGAATGTTGA+TGG | - | chr4_4:4249881-4249900 | Msa0664950:intron | 30.0% | |
| !! | ATTTACCTTGGTTCTTTTAC+AGG | - | chr4_4:4249908-4249927 | Msa0664950:intron | 30.0% |
| AACTTGGGATTTAATGACAT+AGG | - | chr4_4:4249953-4249972 | Msa0664950:intron | 30.0% | |
| ACTTATTCTGTACAAACTAC+TGG | - | chr4_4:4250060-4250079 | Msa0664950:intron | 30.0% | |
| TGCTAGAGTAGAATAAAGAT+AGG | - | chr4_4:4250112-4250131 | Msa0664950:intron | 30.0% | |
| TTAAGCAGGATTGACAAAAT+TGG | - | chr4_4:4250184-4250203 | Msa0664950:intron | 30.0% | |
| AACCTTGATTCATGTAAGAT+TGG | - | chr4_4:4250215-4250234 | Msa0664950:intron | 30.0% | |
| GAAACAAAGCATACAAGAAA+AGG | + | chr4_4:4250293-4250312 | None:intergenic | 30.0% | |
| !! | TCTTGTATGCTTTGTTTCAA+TGG | - | chr4_4:4250295-4250314 | Msa0664950:intron | 30.0% |
| TTTCAATGGAGAAAACGATA+GGG | - | chr4_4:4250309-4250328 | Msa0664950:intron | 30.0% | |
| !!! | AAACGTGGAGAAAAGTTTTT+TGG | - | chr4_4:4250547-4250566 | Msa0664950:intron | 30.0% |
| !!! | AACGTGGAGAAAAGTTTTTT+GGG | - | chr4_4:4250548-4250567 | Msa0664950:intron | 30.0% |
| AAATAGGAATAGAAATGGGT+GGG | + | chr4_4:4250650-4250669 | None:intergenic | 30.0% | |
| GGAAGAAATAGGAATAGAAA+TGG | + | chr4_4:4250655-4250674 | None:intergenic | 30.0% | |
| CACTACCAATACATTATGTT+TGG | + | chr4_4:4250696-4250715 | None:intergenic | 30.0% | |
| TGATCATATGCAAACAATTG+TGG | + | chr4_4:4250791-4250810 | None:intergenic | 30.0% | |
| ATATCCAGAAGTTTCTCTTT+CGG | + | chr4_4:4251001-4251020 | None:intergenic | 30.0% | |
| TATATTCCTTGTGGAATGAA+TGG | - | chr4_4:4251018-4251037 | Msa0664950:intron | 30.0% | |
| ATATTCCTTGTGGAATGAAT+GGG | - | chr4_4:4251019-4251038 | Msa0664950:intron | 30.0% | |
| ! | TGTGAAAGTACATCTCATAA+TGG | + | chr4_4:4251059-4251078 | None:intergenic | 30.0% |
| !! | TCTGATCATTTTTCCTATTG+GGG | - | chr4_4:4251092-4251111 | Msa0664950:intron | 30.0% |
| GGAATAAAGCTAAATTCAAC+AGG | + | chr4_4:4251179-4251198 | None:intergenic | 30.0% | |
| !! | TTTATAATCACAAGTGCTGA+TGG | - | chr4_4:4251206-4251225 | Msa0664950:intron | 30.0% |
| AACTAATCTCTTGAAATGGT+TGG | - | chr4_4:4251237-4251256 | Msa0664950:intron | 30.0% | |
| ! | ACAAGTTCTTTTCATTACTC+AGG | + | chr4_4:4251265-4251284 | None:intergenic | 30.0% |
| AGTAATGAAAAGAACTTGTC+AGG | - | chr4_4:4251266-4251285 | Msa0664950:intron | 30.0% | |
| GTAATGAAAAGAACTTGTCA+GGG | - | chr4_4:4251267-4251286 | Msa0664950:intron | 30.0% | |
| AAGTTAGGTGATTCATACTA+AGG | - | chr4_4:4251317-4251336 | Msa0664950:intron | 30.0% | |
| !! | ATCTCTGAAGTCTCTTAATT+TGG | - | chr4_4:4251489-4251508 | Msa0664950:intron | 30.0% |
| TTATTCCTGTGATAAAGTGT+GGG | + | chr4_4:4252082-4252101 | None:intergenic | 30.0% | |
| TTTATTCCTGTGATAAAGTG+TGG | + | chr4_4:4252083-4252102 | None:intergenic | 30.0% | |
| ! | CTTTGATTTAACCCATATGT+CGG | - | chr4_4:4252777-4252796 | Msa0664950:intron | 30.0% |
| AAACAGAATTCAAGAATCTG+AGG | - | chr4_4:4252839-4252858 | Msa0664950:intron | 30.0% | |
| ! | GTTAATTGCTGGTAATTTTG+TGG | - | chr4_4:4252981-4253000 | Msa0664950:intron | 30.0% |
| TGTTTGTCAAACAAAAATGG+AGG | + | chr4_4:4253008-4253027 | None:intergenic | 30.0% | |
| CCATGTTTGTCAAACAAAAA+TGG | + | chr4_4:4253011-4253030 | None:intergenic | 30.0% | |
| !! | CCATTTTTGTTTGACAAACA+TGG | - | chr4_4:4253008-4253027 | Msa0664950:intron | 30.0% |
| ! | TGACAAACATGGTTTCATTT+TGG | - | chr4_4:4253019-4253038 | Msa0664950:intron | 30.0% |
| ! | TAGGTTTTCAACATGATCAA+GGG | + | chr4_4:4253058-4253077 | None:intergenic | 30.0% |
| ! | TTAGGTTTTCAACATGATCA+AGG | + | chr4_4:4253059-4253078 | None:intergenic | 30.0% |
| !!! | GAAAAAGAAGTTTTAAGGCT+TGG | - | chr4_4:4253097-4253116 | Msa0664950:intron | 30.0% |
| ! | ACTTTTGCTAAGTTCATATG+GGG | + | chr4_4:4253290-4253309 | None:intergenic | 30.0% |
| ! | GACTTTTGCTAAGTTCATAT+GGG | + | chr4_4:4253291-4253310 | None:intergenic | 30.0% |
| ! | TGACTTTTGCTAAGTTCATA+TGG | + | chr4_4:4253292-4253311 | None:intergenic | 30.0% |
| AAAAGTCATCTAAATTGCCA+GGG | - | chr4_4:4253304-4253323 | Msa0664950:exon | 30.0% | |
| ! | TCTTATTCTTTAGGAAAAGG+GGG | - | chr4_4:4253535-4253554 | Msa0664950:intron | 30.0% |
| GAGAGCAAAGATATATAGTT+TGG | + | chr4_4:4253746-4253765 | None:intergenic | 30.0% | |
| ATGTTTATGGTCACAATTTC+AGG | - | chr4_4:4253768-4253787 | Msa0664950:intron | 30.0% | |
| TGTTTATGGTCACAATTTCA+GGG | - | chr4_4:4253769-4253788 | Msa0664950:intron | 30.0% | |
| ! | GAAATTATGAATTTTCTCCG+TGG | - | chr4_4:4254091-4254110 | Msa0664950:five_prime_UTR | 30.0% |
| AAAAAAACACTTCTGTTCCA+CGG | + | chr4_4:4254111-4254130 | None:intergenic | 30.0% | |
| TCATTCTGCTAATTGTATGT+AGG | - | chr4_4:4254140-4254159 | Msa0664950:five_prime_UTR | 30.0% | |
| !! | TCACTTTTCGTTTATGCGTT+TGG | - | chr4_4:4244053-4244072 | Msa0664950:three_prime_UTR | 35.0% |
| !!! | TGTAAATTTTGGAGTCTACG+TGG | - | chr4_4:4244294-4244313 | Msa0664950:intron | 35.0% |
| ! | GATGAAGTTGATTATGCAGT+TGG | - | chr4_4:4244552-4244571 | Msa0664950:intron | 35.0% |
| TCCTGAATGATCGATCAATT+TGG | - | chr4_4:4244604-4244623 | Msa0664950:intron | 35.0% | |
| ! | TAGAATATTTTGTCGATGGG+TGG | - | chr4_4:4244747-4244766 | Msa0664950:intron | 35.0% |
| ! | AATATGAAGTGTCTGGACAA+AGG | + | chr4_4:4244985-4245004 | None:intergenic | 35.0% |
| ! | AGACGAAAATATGAAGTGTC+TGG | + | chr4_4:4244992-4245011 | None:intergenic | 35.0% |
| TTTACCCCTATCATAATACC+TGG | - | chr4_4:4245349-4245368 | Msa0664950:intron | 35.0% | |
| ATTGATCGTATGACTCTGTT+TGG | + | chr4_4:4245547-4245566 | None:intergenic | 35.0% | |
| TATTTGCCAGGATCTATACT+TGG | - | chr4_4:4245620-4245639 | Msa0664950:intron | 35.0% | |
| ATTTGCCAGGATCTATACTT+GGG | - | chr4_4:4245621-4245640 | Msa0664950:intron | 35.0% | |
| TCTATACTTGGGAGAATATG+CGG | - | chr4_4:4245632-4245651 | Msa0664950:intron | 35.0% | |
| TGTGACCAAATTTCAGATCA+TGG | - | chr4_4:4245798-4245817 | Msa0664950:CDS | 35.0% | |
| ATATACAACAAAGAGGCCAA+GGG | + | chr4_4:4245922-4245941 | None:intergenic | 35.0% | |
| AATATACAACAAAGAGGCCA+AGG | + | chr4_4:4245923-4245942 | None:intergenic | 35.0% | |
| !! | AGTCTTTAGGAAGGTATTGA+CGG | + | chr4_4:4246200-4246219 | None:intergenic | 35.0% |
| TCAATACCTTCCTAAAGACT+TGG | - | chr4_4:4246200-4246219 | Msa0664950:intron | 35.0% | |
| AAGTGATGAAAATATGGGAC+TGG | + | chr4_4:4246241-4246260 | None:intergenic | 35.0% | |
| AGGCGAAGTGATGAAAATAT+GGG | + | chr4_4:4246246-4246265 | None:intergenic | 35.0% | |
| AAGGCGAAGTGATGAAAATA+TGG | + | chr4_4:4246247-4246266 | None:intergenic | 35.0% | |
| ! | TTTCTAGAAGTTTAGAAGGG+CGG | + | chr4_4:4246418-4246437 | None:intergenic | 35.0% |
| ! | CGGTTTCTAGAAGTTTAGAA+GGG | + | chr4_4:4246421-4246440 | None:intergenic | 35.0% |
| ACACAAATACCATTGTTGCT+TGG | - | chr4_4:4246449-4246468 | Msa0664950:intron | 35.0% | |
| ! | CACAAATACCATTGTTGCTT+GGG | - | chr4_4:4246450-4246469 | Msa0664950:intron | 35.0% |
| TGGTATTTATAGCCTGCTAT+GGG | + | chr4_4:4246498-4246517 | None:intergenic | 35.0% | |
| ! | CTTGCAAAAAAGTACGGTAA+GGG | + | chr4_4:4246591-4246610 | None:intergenic | 35.0% |
| ! | ACTTGCAAAAAAGTACGGTA+AGG | + | chr4_4:4246592-4246611 | None:intergenic | 35.0% |
| GTATCACCAATTATTTGGGA+TGG | - | chr4_4:4246752-4246771 | Msa0664950:intron | 35.0% | |
| GGATGGTTAATTTCCCAATT+TGG | - | chr4_4:4246769-4246788 | Msa0664950:intron | 35.0% | |
| ACGTCCAAAGAATGAAATTC+TGG | - | chr4_4:4246977-4246996 | Msa0664950:intron | 35.0% | |
| ! | AATTGGATTAATGGATGGGT+AGG | + | chr4_4:4247057-4247076 | None:intergenic | 35.0% |
| ! | TCTTGTTAACTTGGTCAAGT+TGG | - | chr4_4:4247367-4247386 | Msa0664950:intron | 35.0% |
| !! | TAACTTGGTCAAGTTGGATT+TGG | - | chr4_4:4247373-4247392 | Msa0664950:intron | 35.0% |
| ! | CACACAAGCATATCTTTTGA+AGG | + | chr4_4:4247531-4247550 | None:intergenic | 35.0% |
| TGGAATCTCTCAATATGAAG+TGG | - | chr4_4:4247685-4247704 | Msa0664950:intron | 35.0% | |
| ACCTGATAAAGGCTTCATAT+CGG | + | chr4_4:4247730-4247749 | None:intergenic | 35.0% | |
| AGATGCAACAAACCTGATAA+AGG | + | chr4_4:4247741-4247760 | None:intergenic | 35.0% | |
| ! | TGCATCCTTTTGATCACAAT+AGG | - | chr4_4:4247761-4247780 | Msa0664950:intron | 35.0% |
| ! | TTTGGCATCAGTTTTCTAAG+AGG | - | chr4_4:4248238-4248257 | Msa0664950:intron | 35.0% |
| GAAACATCACAATAAGGCAA+AGG | + | chr4_4:4248276-4248295 | None:intergenic | 35.0% | |
| TGCTGTGAAACATCACAATA+AGG | + | chr4_4:4248282-4248301 | None:intergenic | 35.0% | |
| ATAGTTCAGTTGAAGATTCG+GGG | + | chr4_4:4248438-4248457 | None:intergenic | 35.0% | |
| GATAGTTCAGTTGAAGATTC+GGG | + | chr4_4:4248439-4248458 | None:intergenic | 35.0% | |
| GCTTACGCAGTTATAAATTG+AGG | + | chr4_4:4248594-4248613 | None:intergenic | 35.0% | |
| GCCTATTACCTTCAAATCAT+TGG | - | chr4_4:4248686-4248705 | Msa0664950:intron | 35.0% | |
| CATTCACACCAATGATTTGA+AGG | + | chr4_4:4248697-4248716 | None:intergenic | 35.0% | |
| ! | TTCCGTTTTCAATGTTGTCT+TGG | - | chr4_4:4248785-4248804 | Msa0664950:intron | 35.0% |
| TTGCCCTCTTAAATTTGGAA+GGG | - | chr4_4:4248830-4248849 | Msa0664950:intron | 35.0% | |
| ACACCCTTCCAAATTTAAGA+GGG | + | chr4_4:4248836-4248855 | None:intergenic | 35.0% | |
| ! | AAAGCATTCACAGGACAATA+AGG | + | chr4_4:4248998-4249017 | None:intergenic | 35.0% |
| TACTTAAGTTCAACGAGTAG+TGG | + | chr4_4:4249140-4249159 | None:intergenic | 35.0% | |
| TACTGTATGGACAATATTGG+GGG | + | chr4_4:4249324-4249343 | None:intergenic | 35.0% | |
| TAGTAATCGTAATCAGCTGT+TGG | - | chr4_4:4249404-4249423 | Msa0664950:intron | 35.0% | |
| CACTCCTTGAGTCATTAAAA+TGG | - | chr4_4:4249502-4249521 | Msa0664950:intron | 35.0% | |
| !! | CTCTCCATTTTAATGACTCA+AGG | + | chr4_4:4249509-4249528 | None:intergenic | 35.0% |
| CTTGAGTCATTAAAATGGAG+AGG | - | chr4_4:4249507-4249526 | Msa0664950:intron | 35.0% | |
| GATGAGTGAACTTTGTTGAT+TGG | - | chr4_4:4249583-4249602 | Msa0664950:intron | 35.0% | |
| AATGAGGATGTAATACCCAT+TGG | - | chr4_4:4249653-4249672 | Msa0664950:intron | 35.0% | |
| ! | AGATGCAATATTTCTGACAG+AGG | - | chr4_4:4249742-4249761 | Msa0664950:intron | 35.0% |
| ! | GATGCAATATTTCTGACAGA+GGG | - | chr4_4:4249743-4249762 | Msa0664950:intron | 35.0% |
| !! | GTTGATGGTAACATTTACCT+TGG | - | chr4_4:4249896-4249915 | Msa0664950:intron | 35.0% |
| ! | GCATGTTTAGCTCATTTGAA+AGG | - | chr4_4:4249980-4249999 | Msa0664950:intron | 35.0% |
| TAGCTCATTTGAAAGGTGAT+TGG | - | chr4_4:4249987-4250006 | Msa0664950:intron | 35.0% | |
| CACCAATCTTACATGAATCA+AGG | + | chr4_4:4250220-4250239 | None:intergenic | 35.0% | |
| !! | TCATGTAAGATTGGTGATGA+AGG | - | chr4_4:4250224-4250243 | Msa0664950:intron | 35.0% |
| !! | TAAGATTGGTGATGAAGGAT+TGG | - | chr4_4:4250229-4250248 | Msa0664950:intron | 35.0% |
| GTTTCAATGGAGAAAACGAT+AGG | - | chr4_4:4250308-4250327 | Msa0664950:intron | 35.0% | |
| !! | AGCGTCAGTTTTAACCTTAT+GGG | - | chr4_4:4250464-4250483 | Msa0664950:intron | 35.0% |
| !! | TCAGTTTTAACCTTATGGGA+AGG | - | chr4_4:4250468-4250487 | Msa0664950:intron | 35.0% |
| TCTCCAATTCTCTTTAAACG+TGG | - | chr4_4:4250532-4250551 | Msa0664950:intron | 35.0% | |
| TCTCCACGTTTAAAGAGAAT+TGG | + | chr4_4:4250538-4250557 | None:intergenic | 35.0% | |
| !!! | TGGAGAAAAGTTTTTTGGGT+GGG | - | chr4_4:4250552-4250571 | Msa0664950:intron | 35.0% |
| AGGTACGTATTTCTCTTGTT+TGG | + | chr4_4:4250621-4250640 | None:intergenic | 35.0% | |
| GAAATAGGAATAGAAATGGG+TGG | + | chr4_4:4250651-4250670 | None:intergenic | 35.0% | |
| ! | GATTTGGGATAGGAAGAAAT+AGG | + | chr4_4:4250666-4250685 | None:intergenic | 35.0% |
| !! | TGGATTAATGGATTTGGGAT+AGG | + | chr4_4:4250676-4250695 | None:intergenic | 35.0% |
| !! | TATTGGTAGTGATGACTTCT+TGG | - | chr4_4:4250705-4250724 | Msa0664950:CDS | 35.0% |
| ! | ACTTTCTTCACAACGCTTTT+AGG | - | chr4_4:4250862-4250881 | Msa0664950:intron | 35.0% |
| TCATAAGCAATTGATCTGCT+TGG | - | chr4_4:4250885-4250904 | Msa0664950:intron | 35.0% | |
| GAATTGTCTGATACTGAAGT+TGG | - | chr4_4:4250907-4250926 | Msa0664950:intron | 35.0% | |
| GATACTGAAGTTGGAAACAA+TGG | - | chr4_4:4250916-4250935 | Msa0664950:intron | 35.0% | |
| TCAAACCTGATAAATGCTCT+AGG | + | chr4_4:4250942-4250961 | None:intergenic | 35.0% | |
| ACTTCTGGATATATTCCTTG+TGG | - | chr4_4:4251009-4251028 | Msa0664950:intron | 35.0% | |
| !!! | CTTCTCTCTCTCTGTTTTTT+GGG | - | chr4_4:4251139-4251158 | Msa0664950:intron | 35.0% |
| TTCTTTGAGTCGTAGAAGTT+AGG | - | chr4_4:4251302-4251321 | Msa0664950:intron | 35.0% | |
| CTAGACAATCCTACAAGAAA+TGG | + | chr4_4:4251400-4251419 | None:intergenic | 35.0% | |
| TTGTTAGTGACAGTGGTTTA+AGG | - | chr4_4:4251449-4251468 | Msa0664950:intron | 35.0% | |
| AGTGGTTTAAGGAAATTGTG+TGG | - | chr4_4:4251460-4251479 | Msa0664950:intron | 35.0% | |
| ! | GCAAATCAATCAGATTGGTT+GGG | + | chr4_4:4251773-4251792 | None:intergenic | 35.0% |
| AGCAAATCAATCAGATTGGT+TGG | + | chr4_4:4251774-4251793 | None:intergenic | 35.0% | |
| CAGTAGCAAATCAATCAGAT+TGG | + | chr4_4:4251778-4251797 | None:intergenic | 35.0% | |
| AGGAGCTCAATTGGTATTAT+TGG | + | chr4_4:4251813-4251832 | None:intergenic | 35.0% | |
| TCCTAGAAATCCTATTACAC+AGG | - | chr4_4:4251870-4251889 | Msa0664950:intron | 35.0% | |
| ACCTGTGTAATAGGATTTCT+AGG | + | chr4_4:4251874-4251893 | None:intergenic | 35.0% | |
| TGGTAAAATCAAGTGAGAGT+GGG | - | chr4_4:4251998-4252017 | Msa0664950:intron | 35.0% | |
| TAATTTCCGTTCCCATTGAA+AGG | - | chr4_4:4252049-4252068 | Msa0664950:intron | 35.0% | |
| ATCTAACCTTTCAATGGGAA+CGG | + | chr4_4:4252058-4252077 | None:intergenic | 35.0% | |
| TGGGAATCTAACCTTTCAAT+GGG | + | chr4_4:4252063-4252082 | None:intergenic | 35.0% | |
| CACAGGAATAAAAGAGATTC+TGG | - | chr4_4:4252091-4252110 | Msa0664950:intron | 35.0% | |
| TTCTGGATGAAGTATATTCC+TGG | - | chr4_4:4252108-4252127 | Msa0664950:intron | 35.0% | |
| TCTGGATGAAGTATATTCCT+GGG | - | chr4_4:4252109-4252128 | Msa0664950:intron | 35.0% | |
| !!! | CATTTTGAATTTGCTGATGC+AGG | - | chr4_4:4252209-4252228 | Msa0664950:intron | 35.0% |
| TTCTGCAAAGTGATTATCTG+TGG | - | chr4_4:4252332-4252351 | Msa0664950:CDS | 35.0% | |
| ! | TGTGGTTTTCTTATACCGTT+TGG | - | chr4_4:4252373-4252392 | Msa0664950:CDS | 35.0% |
| !!! | GTCTCTTTTTTTGCAATGCT+TGG | - | chr4_4:4252507-4252526 | Msa0664950:intron | 35.0% |
| TGTCAGTCAGAAGAGATTAA+TGG | + | chr4_4:4252647-4252666 | None:intergenic | 35.0% | |
| !! | TCAAATTAGCACCGACATAT+GGG | + | chr4_4:4252791-4252810 | None:intergenic | 35.0% |
| !! | TTCAAATTAGCACCGACATA+TGG | + | chr4_4:4252792-4252811 | None:intergenic | 35.0% |
| AAAACTGTGGAGTTAATTGC+TGG | - | chr4_4:4252970-4252989 | Msa0664950:intron | 35.0% | |
| !! | TTCTTTTTCACATTCGCACA+TGG | + | chr4_4:4253086-4253105 | None:intergenic | 35.0% |
| TCCTAAATGCGACAATTAGT+TGG | - | chr4_4:4253165-4253184 | Msa0664950:CDS | 35.0% | |
| ACCAACTAATTGTCGCATTT+AGG | + | chr4_4:4253169-4253188 | None:intergenic | 35.0% | |
| !!! | GAATTTTCTGGTTTTGCGAA+AGG | - | chr4_4:4253246-4253265 | Msa0664950:CDS | 35.0% |
| CAAAAGTCATCTAAATTGCC+AGG | - | chr4_4:4253303-4253322 | Msa0664950:exon | 35.0% | |
| CAATGTTACACTTACATTGC+TGG | - | chr4_4:4253500-4253519 | Msa0664950:intron | 35.0% | |
| ATGTAGGGGAAATTTATAGC+CGG | + | chr4_4:4253661-4253680 | None:intergenic | 35.0% | |
| TAGTTTGGCAACTCTACATA+AGG | + | chr4_4:4253731-4253750 | None:intergenic | 35.0% | |
| TCTTTGCTCTCACATGTTTA+TGG | - | chr4_4:4253755-4253774 | Msa0664950:intron | 35.0% | |
| AAGATTCAAAGAAACCAACG+CGG | + | chr4_4:4253799-4253818 | None:intergenic | 35.0% | |
| AAACTTGAGATCTCTGACAT+TGG | - | chr4_4:4253869-4253888 | Msa0664950:intron | 35.0% | |
| ATTAATTCACCTCCCAAACT+TGG | - | chr4_4:4253932-4253951 | Msa0664950:intron | 35.0% | |
| TGACATGCTAGAAAAGCAAA+AGG | - | chr4_4:4254019-4254038 | Msa0664950:intron | 35.0% | |
| GACATGCTAGAAAAGCAAAA+GGG | - | chr4_4:4254020-4254039 | Msa0664950:intron | 35.0% | |
| ACATGCTAGAAAAGCAAAAG+GGG | - | chr4_4:4254021-4254040 | Msa0664950:intron | 35.0% | |
| ! | CATAGGCTAATATGGCTTTA+TGG | - | chr4_4:4254060-4254079 | Msa0664950:five_prime_UTR | 35.0% |
| ! | CGCTTCTTGTTGTAAGCAAA+TGG | + | chr4_4:4243943-4243962 | None:intergenic | 40.0% |
| !! | TGCTTACAACAAGAAGCGTT+CGG | - | chr4_4:4243945-4243964 | Msa0664950:three_prime_UTR | 40.0% |
| TTCTTCTTCTGCAACTTCAC+CGG | - | chr4_4:4243999-4244018 | Msa0664950:three_prime_UTR | 40.0% | |
| GCCAAATTGATCGATCATTC+AGG | + | chr4_4:4244608-4244627 | None:intergenic | 40.0% | |
| ! | GGTTATTGAATGGATGATGG+TGG | - | chr4_4:4244688-4244707 | Msa0664950:intron | 40.0% |
| GCAAATGTGGGAGTTTGAAA+TGG | - | chr4_4:4244838-4244857 | Msa0664950:intron | 40.0% | |
| ! | AATGTGGGAGTTTGAAATGG+TGG | - | chr4_4:4244841-4244860 | Msa0664950:intron | 40.0% |
| ! | ATCGTTTTCTTATCCGTCCA+TGG | - | chr4_4:4244869-4244888 | Msa0664950:intron | 40.0% |
| TGTAAGCGTAAATCCATGGA+CGG | + | chr4_4:4244885-4244904 | None:intergenic | 40.0% | |
| GTGTGTCCAGAAAATAAGTG+AGG | - | chr4_4:4244935-4244954 | Msa0664950:intron | 40.0% | |
| CACTGCAATCTTTATTCGAC+AGG | - | chr4_4:4245018-4245037 | Msa0664950:intron | 40.0% | |
| ! | AGACATTTTCTATGCTGCCA+CGG | - | chr4_4:4245056-4245075 | Msa0664950:intron | 40.0% |
| !! | ATTTGCTGACTTATATCCCG+TGG | + | chr4_4:4245076-4245095 | None:intergenic | 40.0% |
| GCTCTCCAGGTAAATCATAT+AGG | - | chr4_4:4245160-4245179 | Msa0664950:CDS | 40.0% | |
| CAGAGCCTATATGATTTACC+TGG | + | chr4_4:4245168-4245187 | None:intergenic | 40.0% | |
| AGGATGAGCTTAGCTTATAG+CGG | + | chr4_4:4245490-4245509 | None:intergenic | 40.0% | |
| ! | GCTGATAAGCTAGCTTAAAG+AGG | + | chr4_4:4245510-4245529 | None:intergenic | 40.0% |
| ATTCTCCCAAGTATAGATCC+TGG | + | chr4_4:4245629-4245648 | None:intergenic | 40.0% | |
| CTATACTTGGGAGAATATGC+GGG | - | chr4_4:4245633-4245652 | Msa0664950:intron | 40.0% | |
| ATGGATGTCATCTCATCTCA+GGG | - | chr4_4:4245672-4245691 | Msa0664950:intron | 40.0% | |
| AGAAAGATCTACCGAGAGTA+AGG | + | chr4_4:4245703-4245722 | None:intergenic | 40.0% | |
| ! | CCAGTCCATGATCTGAAATT+TGG | + | chr4_4:4245806-4245825 | None:intergenic | 40.0% |
| CCAAATTTCAGATCATGGAC+TGG | - | chr4_4:4245803-4245822 | Msa0664950:CDS | 40.0% | |
| ATCTAGCATACTCATGCTGT+TGG | - | chr4_4:4246047-4246066 | Msa0664950:intron | 40.0% | |
| ! | TAAGACCTCTAGAAAGGCTT+AGG | - | chr4_4:4246344-4246363 | Msa0664950:intron | 40.0% |
| ! | GCGGTTTCTAGAAGTTTAGA+AGG | + | chr4_4:4246422-4246441 | None:intergenic | 40.0% |
| GTGGTATTTATAGCCTGCTA+TGG | + | chr4_4:4246499-4246518 | None:intergenic | 40.0% | |
| AAGTACGGTAAGGGATACTA+GGG | + | chr4_4:4246582-4246601 | None:intergenic | 40.0% | |
| AAAGTACGGTAAGGGATACT+AGG | + | chr4_4:4246583-4246602 | None:intergenic | 40.0% | |
| AGAAATAGGTGTGCCAACAA+TGG | + | chr4_4:4246849-4246868 | None:intergenic | 40.0% | |
| AACAAAAAGGCTTTGCAGAG+AGG | + | chr4_4:4247154-4247173 | None:intergenic | 40.0% | |
| CCATCAGTAAAAGCAACCTA+GGG | + | chr4_4:4247242-4247261 | None:intergenic | 40.0% | |
| ACCATCAGTAAAAGCAACCT+AGG | + | chr4_4:4247243-4247262 | None:intergenic | 40.0% | |
| CAAGTTAACAAGACCAGAGA+AGG | + | chr4_4:4247360-4247379 | None:intergenic | 40.0% | |
| !! | CTTCTCTGGTCTTGTTAACT+TGG | - | chr4_4:4247358-4247377 | Msa0664950:intron | 40.0% |
| !! | GCACTGTTCATTTTCAAGGT+TGG | - | chr4_4:4247420-4247439 | Msa0664950:intron | 40.0% |
| TCCGATATGAAGCCTTTATC+AGG | - | chr4_4:4247726-4247745 | Msa0664950:intron | 40.0% | |
| TCTGGCCTATTGTGATCAAA+AGG | + | chr4_4:4247769-4247788 | None:intergenic | 40.0% | |
| AACTTGGGTGGAATATGAGT+GGG | + | chr4_4:4247892-4247911 | None:intergenic | 40.0% | |
| ! | CATATTCCACCCAAGTTGAA+AGG | - | chr4_4:4247895-4247914 | Msa0664950:intron | 40.0% |
| CACTCAATGCCTTTCAACTT+GGG | + | chr4_4:4247907-4247926 | None:intergenic | 40.0% | |
| TCACTCAATGCCTTTCAACT+TGG | + | chr4_4:4247908-4247927 | None:intergenic | 40.0% | |
| CATGCACAGAGACAAGTATA+TGG | + | chr4_4:4247991-4248010 | None:intergenic | 40.0% | |
| CTTGTCAAGCTTGTAAGTTC+TGG | + | chr4_4:4248095-4248114 | None:intergenic | 40.0% | |
| CAAATCATTGGTGTGAATGC+AGG | - | chr4_4:4248698-4248717 | Msa0664950:intron | 40.0% | |
| TGCACCTCTTTACCTGTTAA+AGG | - | chr4_4:4248723-4248742 | Msa0664950:intron | 40.0% | |
| ATGTTGTCTTGGTTCATTCC+AGG | - | chr4_4:4248796-4248815 | Msa0664950:intron | 40.0% | |
| GAAGCTTGCCCTCTTAAATT+TGG | - | chr4_4:4248825-4248844 | Msa0664950:intron | 40.0% | |
| CTTGCCCTCTTAAATTTGGA+AGG | - | chr4_4:4248829-4248848 | Msa0664950:intron | 40.0% | |
| GACACCCTTCCAAATTTAAG+AGG | + | chr4_4:4248837-4248856 | None:intergenic | 40.0% | |
| TCTTGTAACATCTGCATGCT+TGG | - | chr4_4:4248855-4248874 | Msa0664950:intron | 40.0% | |
| ! | AGCAAGCTTAAAGCATTCAC+AGG | + | chr4_4:4249007-4249026 | None:intergenic | 40.0% |
| AGTAAGAAAAATATCGGGGG+AGG | - | chr4_4:4249156-4249175 | Msa0664950:intron | 40.0% | |
| TCGTAATCAGCTGTTGGAAA+TGG | - | chr4_4:4249410-4249429 | Msa0664950:intron | 40.0% | |
| GGGTTGGAGAAATAAAAGGT+TGG | + | chr4_4:4249455-4249474 | None:intergenic | 40.0% | |
| GCAAGGGTTGGAGAAATAAA+AGG | + | chr4_4:4249459-4249478 | None:intergenic | 40.0% | |
| ! | GATTCAAGTTTGACAGTGCA+GGG | + | chr4_4:4249717-4249736 | None:intergenic | 40.0% |
| ! | AGATTCAAGTTTGACAGTGC+AGG | + | chr4_4:4249718-4249737 | None:intergenic | 40.0% |
| ! | TGATGAAGGATTGGTGAACT+TGG | - | chr4_4:4250238-4250257 | Msa0664950:intron | 40.0% |
| ACTCTGCTTGTTTGGATGAA+TGG | - | chr4_4:4250409-4250428 | Msa0664950:intron | 40.0% | |
| !! | GAGCGTCAGTTTTAACCTTA+TGG | - | chr4_4:4250463-4250482 | Msa0664950:intron | 40.0% |
| TCTTCTTTCTCCTTCCCATA+AGG | + | chr4_4:4250481-4250500 | None:intergenic | 40.0% | |
| !!! | GTGGAGAAAAGTTTTTTGGG+TGG | - | chr4_4:4250551-4250570 | Msa0664950:intron | 40.0% |
| TAGAAATGGGTGGGAAATAG+AGG | + | chr4_4:4250641-4250660 | None:intergenic | 40.0% | |
| TGTCATTGCAAGTGAAAGTG+TGG | - | chr4_4:4250834-4250853 | Msa0664950:intron | 40.0% | |
| ! | AATGGCCTAGAGCATTTATC+AGG | - | chr4_4:4250934-4250953 | Msa0664950:intron | 40.0% |
| AAGCAGACATCAATGCCAAA+TGG | + | chr4_4:4251122-4251141 | None:intergenic | 40.0% | |
| !!! | GCTTCTCTCTCTCTGTTTTT+TGG | - | chr4_4:4251138-4251157 | Msa0664950:intron | 40.0% |
| TCTTGTAGGATTGTCTAGTC+TGG | - | chr4_4:4251402-4251421 | Msa0664950:intron | 40.0% | |
| ACTGTCACTAACAACAGTGA+AGG | + | chr4_4:4251443-4251462 | None:intergenic | 40.0% | |
| TTCACTGTTGTTAGTGACAG+TGG | - | chr4_4:4251442-4251461 | Msa0664950:intron | 40.0% | |
| GCTTACCAAATTACTGATGC+TGG | - | chr4_4:4251514-4251533 | Msa0664950:intron | 40.0% | |
| ATGGGAACACATACTTGCAA+GGG | + | chr4_4:4251548-4251567 | None:intergenic | 40.0% | |
| ! | TTGGTTTGAGCTAAGGCTTA+AGG | + | chr4_4:4251742-4251761 | None:intergenic | 40.0% |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | + | chr4_4:4251749-4251768 | None:intergenic | 40.0% |
| GTGGTAAAATCAAGTGAGAG+TGG | - | chr4_4:4251997-4252016 | Msa0664950:intron | 40.0% | |
| AGAGTGGGAGAAGTTATAGT+TGG | - | chr4_4:4252013-4252032 | Msa0664950:intron | 40.0% | |
| GTGGGAATCTAACCTTTCAA+TGG | + | chr4_4:4252064-4252083 | None:intergenic | 40.0% | |
| AGATTCCCACACTTTATCAC+AGG | - | chr4_4:4252074-4252093 | Msa0664950:intron | 40.0% | |
| AGCATAAATTGTTCAGCCTC+TGG | - | chr4_4:4252151-4252170 | Msa0664950:intron | 40.0% | |
| CAAACAAATCAAGGTCAGTG+AGG | + | chr4_4:4252244-4252263 | None:intergenic | 40.0% | |
| !! | CTCACTGACCTTGATTTGTT+TGG | - | chr4_4:4252242-4252261 | Msa0664950:CDS | 40.0% |
| ACAAATTTGACTGGGACAGA+GGG | + | chr4_4:4252609-4252628 | None:intergenic | 40.0% | |
| TGAGACGGACAAATTTGACT+GGG | + | chr4_4:4252617-4252636 | None:intergenic | 40.0% | |
| ATGAGACGGACAAATTTGAC+TGG | + | chr4_4:4252618-4252637 | None:intergenic | 40.0% | |
| AATTAACTGCATGCTACAGC+TGG | - | chr4_4:4252752-4252771 | Msa0664950:intron | 40.0% | |
| ! | ATTCAAGAATCTGAGGTCCT+TGG | - | chr4_4:4252846-4252865 | Msa0664950:intron | 40.0% |
| ATCACAGAACAGCAACCTTA+CGG | - | chr4_4:4252945-4252964 | Msa0664950:intron | 40.0% | |
| ACATTCGCACATGGCTATTT+AGG | + | chr4_4:4253077-4253096 | None:intergenic | 40.0% | |
| ! | TAGTCGGGATGTGAATTTTC+TGG | - | chr4_4:4253234-4253253 | Msa0664950:CDS | 40.0% |
| CTAAGTTCATATGGGGTAGT+TGG | + | chr4_4:4253283-4253302 | None:intergenic | 40.0% | |
| AAAGGACTTGGAAACAACTC+AGG | + | chr4_4:4253421-4253440 | None:intergenic | 40.0% | |
| CAACTCAGCTAAAAAGGACT+TGG | + | chr4_4:4253433-4253452 | None:intergenic | 40.0% | |
| GTTACACTTACATTGCTGGA+TGG | - | chr4_4:4253504-4253523 | Msa0664950:intron | 40.0% | |
| GAAAAGGGGGACTATCTAAA+TGG | - | chr4_4:4253548-4253567 | Msa0664950:intron | 40.0% | |
| AATACTTGCATCACCTCTAC+TGG | - | chr4_4:4253822-4253841 | Msa0664950:intron | 40.0% | |
| TCTGACATTGGAGTCATGTA+AGG | - | chr4_4:4253881-4253900 | Msa0664950:intron | 40.0% | |
| TCCCAAACTTGGTAAGCTTT+CGG | - | chr4_4:4253943-4253962 | Msa0664950:intron | 40.0% | |
| !! | GGCTAATATGGCTTTATGGA+AGG | - | chr4_4:4254064-4254083 | Msa0664950:five_prime_UTR | 40.0% |
| GTAATAAGAGTGGCGTGAAG+TGG | + | chr4_4:4243872-4243891 | None:intergenic | 45.0% | |
| !! | AACAAGAAGCGTTCGGTGAT+CGG | - | chr4_4:4243952-4243971 | Msa0664950:three_prime_UTR | 45.0% |
| AACTGTTACCGTGACATGAC+CGG | + | chr4_4:4244021-4244040 | None:intergenic | 45.0% | |
| ACACACAAGTCCAACAGTGA+CGG | + | chr4_4:4244921-4244940 | None:intergenic | 45.0% | |
| ! | GACATTTTCTATGCTGCCAC+GGG | - | chr4_4:4245057-4245076 | Msa0664950:intron | 45.0% |
| ATTTCGAGATTGTGCTCTCC+AGG | - | chr4_4:4245147-4245166 | Msa0664950:CDS | 45.0% | |
| !! | ATGCGGGTGTTGATGATTCT+TGG | - | chr4_4:4245649-4245668 | Msa0664950:intron | 45.0% |
| !! | GGGTGTTGATGATTCTTGGA+TGG | - | chr4_4:4245653-4245672 | Msa0664950:intron | 45.0% |
| GATGGATGTCATCTCATCTC+AGG | - | chr4_4:4245671-4245690 | Msa0664950:intron | 45.0% | |
| TCAGGGTTCATCCTTACTCT+CGG | - | chr4_4:4245689-4245708 | Msa0664950:intron | 45.0% | |
| !!! | GCGTCTGATGTCACTGATTT+TGG | - | chr4_4:4245723-4245742 | Msa0664950:intron | 45.0% |
| TAGAGGTCTTAGAGCCTTTC+TGG | + | chr4_4:4246335-4246354 | None:intergenic | 45.0% | |
| !! | AGGCTCTAAGACCTCTAGAA+AGG | - | chr4_4:4246338-4246357 | Msa0664950:intron | 45.0% |
| TTATAGCCTGCTATGGGCTT+GGG | + | chr4_4:4246492-4246511 | None:intergenic | 45.0% | |
| TTTATAGCCTGCTATGGGCT+TGG | + | chr4_4:4246493-4246512 | None:intergenic | 45.0% | |
| CTTGAGAATGCTCTCAAGAG+TGG | + | chr4_4:4246518-4246537 | None:intergenic | 45.0% | |
| !! | CACTCTTGAGAGCATTCTCA+AGG | - | chr4_4:4246516-4246535 | Msa0664950:intron | 45.0% |
| TGACCTTGCCTTGTGAGAAA+AGG | - | chr4_4:4246704-4246723 | Msa0664950:intron | 45.0% | |
| ! | AAGCCTTTTCTCACAAGGCA+AGG | + | chr4_4:4246710-4246729 | None:intergenic | 45.0% |
| ! | CAACGAAGCCTTTTCTCACA+AGG | + | chr4_4:4246715-4246734 | None:intergenic | 45.0% |
| !! | CGAAAGCACCTTCGTGATAA+TGG | + | chr4_4:4247029-4247048 | None:intergenic | 45.0% |
| ! | TGTCTAGAAGCTTTGTCCCT+AGG | - | chr4_4:4247223-4247242 | Msa0664950:intron | 45.0% |
| !!! | CCCTAGGTTGCTTTTACTGA+TGG | - | chr4_4:4247239-4247258 | Msa0664950:intron | 45.0% |
| CTTGTCAAGTTTGACAGACC+TGG | + | chr4_4:4247290-4247309 | None:intergenic | 45.0% | |
| TTGGATTTGGAGAGATGTCC+TGG | - | chr4_4:4247386-4247405 | Msa0664950:intron | 45.0% | |
| TGGATTTGGAGAGATGTCCT+GGG | - | chr4_4:4247387-4247406 | Msa0664950:intron | 45.0% | |
| !!! | GGAGGCACTGTTCATTTTCA+AGG | - | chr4_4:4247416-4247435 | Msa0664950:intron | 45.0% |
| CAACTTGGGTGGAATATGAG+TGG | + | chr4_4:4247893-4247912 | None:intergenic | 45.0% | |
| TCAATGCCTTTCAACTTGGG+TGG | + | chr4_4:4247904-4247923 | None:intergenic | 45.0% | |
| CTTGTCAAGCTTGCAAGTTC+TGG | + | chr4_4:4248187-4248206 | None:intergenic | 45.0% | |
| GCATGCTTGGATTCACTTTC+AGG | - | chr4_4:4248868-4248887 | Msa0664950:intron | 45.0% | |
| GCACTCAACCAGTGAAGAAA+GGG | + | chr4_4:4249040-4249059 | None:intergenic | 45.0% | |
| AGCACTCAACCAGTGAAGAA+AGG | + | chr4_4:4249041-4249060 | None:intergenic | 45.0% | |
| CAGCTGTTGGAAATGGTAGT+CGG | - | chr4_4:4249417-4249436 | Msa0664950:intron | 45.0% | |
| AGCTGTTGGAAATGGTAGTC+GGG | - | chr4_4:4249418-4249437 | Msa0664950:intron | 45.0% | |
| GGAGTGACAAGACAGTTTGA+GGG | + | chr4_4:4249488-4249507 | None:intergenic | 45.0% | |
| AGGAGTGACAAGACAGTTTG+AGG | + | chr4_4:4249489-4249508 | None:intergenic | 45.0% | |
| ! | TTTCTGACAGAGGGTGTGAT+AGG | - | chr4_4:4249752-4249771 | Msa0664950:intron | 45.0% |
| GGCTCCGTAACAGTTATTGT+AGG | - | chr4_4:4249870-4249889 | Msa0664950:CDS | 45.0% | |
| CCAGTCCTGTAAAAGAACCA+AGG | + | chr4_4:4249916-4249935 | None:intergenic | 45.0% | |
| !! | CCTTGGTTCTTTTACAGGAC+TGG | - | chr4_4:4249913-4249932 | Msa0664950:intron | 45.0% |
| TAGGTCGAGATTGCATGTGT+TGG | - | chr4_4:4250351-4250370 | Msa0664950:CDS | 45.0% | |
| AGGTCGAGATTGCATGTGTT+GGG | - | chr4_4:4250352-4250371 | Msa0664950:CDS | 45.0% | |
| TTGCATGTGTTGGGATGGAT+AGG | - | chr4_4:4250361-4250380 | Msa0664950:CDS | 45.0% | |
| TGTTGGGATGGATAGGCATA+AGG | - | chr4_4:4250368-4250387 | Msa0664950:CDS | 45.0% | |
| TTCTCTCGACTCTGCTTGTT+TGG | - | chr4_4:4250401-4250420 | Msa0664950:intron | 45.0% | |
| AGCTGGCACATTATCGTACT+TGG | - | chr4_4:4250759-4250778 | Msa0664950:CDS | 45.0% | |
| TGCTCCGAAAGAGAAACTTC+TGG | - | chr4_4:4250994-4251013 | Msa0664950:intron | 45.0% | |
| CCAAACCCATTCATTCCACA+AGG | + | chr4_4:4251027-4251046 | None:intergenic | 45.0% | |
| ! | CCTTGTGGAATGAATGGGTT+TGG | - | chr4_4:4251024-4251043 | Msa0664950:intron | 45.0% |
| AAGAACTTGTCAGGGAGAGA+TGG | - | chr4_4:4251275-4251294 | Msa0664950:intron | 45.0% | |
| CCAGTCCAGCATCAGTAATT+TGG | + | chr4_4:4251522-4251541 | None:intergenic | 45.0% | |
| CCAAATTACTGATGCTGGAC+TGG | - | chr4_4:4251519-4251538 | Msa0664950:intron | 45.0% | |
| CATGGGAACACATACTTGCA+AGG | + | chr4_4:4251549-4251568 | None:intergenic | 45.0% | |
| TGAGCTAAGGCTTAAGGAGT+TGG | + | chr4_4:4251736-4251755 | None:intergenic | 45.0% | |
| ! | GATTGGTTGGGTAGCTCAAT+TGG | + | chr4_4:4251761-4251780 | None:intergenic | 45.0% |
| CCTTGAAACAGGAGCTCAAT+TGG | + | chr4_4:4251822-4251841 | None:intergenic | 45.0% | |
| CCAATTGAGCTCCTGTTTCA+AGG | - | chr4_4:4251819-4251838 | Msa0664950:intron | 45.0% | |
| !!! | TGTTCAGCCTCTGGTTTTCT+AGG | - | chr4_4:4252160-4252179 | Msa0664950:intron | 45.0% |
| TTTGCTGATGCAGGTTTGAC+TGG | - | chr4_4:4252218-4252237 | Msa0664950:intron | 45.0% | |
| !! | ACCTTGATTTGTTTGGCGCT+AGG | - | chr4_4:4252249-4252268 | Msa0664950:CDS | 45.0% |
| TCCTAGCGCCAAACAAATCA+AGG | + | chr4_4:4252253-4252272 | None:intergenic | 45.0% | |
| GACAAATTTGACTGGGACAG+AGG | + | chr4_4:4252610-4252629 | None:intergenic | 45.0% | |
| AGGTCCTTGGAAATATGCAG+CGG | - | chr4_4:4252859-4252878 | Msa0664950:intron | 45.0% | |
| CAACCTTACGGACAAAACTG+TGG | - | chr4_4:4252957-4252976 | Msa0664950:intron | 45.0% | |
| !! | ACTCCACAGTTTTGTCCGTA+AGG | + | chr4_4:4252963-4252982 | None:intergenic | 45.0% |
| GTCATCTAAATTGCCAGGGT+TGG | - | chr4_4:4253308-4253327 | Msa0664950:exon | 45.0% | |
| AGACAATCACAAACCAACCC+TGG | + | chr4_4:4253324-4253343 | None:intergenic | 45.0% | |
| GTTTCTCCGGTACTTTGTGT+AGG | - | chr4_4:4253464-4253483 | Msa0664950:intron | 45.0% | |
| CAACTGCCTACACAAAGTAC+CGG | + | chr4_4:4253473-4253492 | None:intergenic | 45.0% | |
| TAGGTCCTGGAGAATCATAC+CGG | - | chr4_4:4253639-4253658 | Msa0664950:intron | 45.0% | |
| TATAGCCGGTATGATTCTCC+AGG | + | chr4_4:4253647-4253666 | None:intergenic | 45.0% | |
| GAAAGCTTACCAAGTTTGGG+AGG | + | chr4_4:4253944-4253963 | None:intergenic | 45.0% | |
| GCCGAAAGCTTACCAAGTTT+GGG | + | chr4_4:4253947-4253966 | None:intergenic | 45.0% | |
| !!! | TAAAATTAATGTTTAAATTT+TGG | - | chr4_4:4244193-4244212 | Msa0664950:CDS | 5.0% |
| !! | GAATATAAAAAATAAAAAAA+AGG | + | chr4_4:4251378-4251397 | None:intergenic | 5.0% |
| !!! | TTTTCATAATAAAAAATTAA+CGG | - | chr4_4:4253692-4253711 | Msa0664950:intron | 5.0% |
| GAAAAACCGCGAATGTGACG+TGG | + | chr4_4:4243829-4243848 | None:intergenic | 50.0% | |
| CAACTTCACCGGTCATGTCA+CGG | - | chr4_4:4244010-4244029 | Msa0664950:three_prime_UTR | 50.0% | |
| TGGACAATGTCCGTCACTGT+TGG | - | chr4_4:4244908-4244927 | Msa0664950:intron | 50.0% | |
| !! | CATGGACTGGAGTGTATCAG+TGG | - | chr4_4:4245816-4245835 | Msa0664950:CDS | 50.0% |
| GCACTTGTGTTTCAGTCCCT+TGG | - | chr4_4:4245903-4245922 | Msa0664950:intron | 50.0% | |
| ! | AGGGCACCAAGTCTTTAGGA+AGG | + | chr4_4:4246209-4246228 | None:intergenic | 50.0% |
| !! | AAATATGGGACTGGCCCTTC+TGG | + | chr4_4:4246232-4246251 | None:intergenic | 50.0% |
| TAAGCACGAGTCTTGGGACA+AGG | + | chr4_4:4246266-4246285 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | - | chr4_4:4246265-4246284 | Msa0664950:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | - | chr4_4:4246266-4246285 | Msa0664950:intron | 50.0% | |
| ! | GGAGGGCTTCTATGCCTTTT+AGG | + | chr4_4:4246314-4246333 | None:intergenic | 50.0% |
| GGTCTTAGAGCCTTTCTGGA+GGG | + | chr4_4:4246331-4246350 | None:intergenic | 50.0% | |
| AGGTCTTAGAGCCTTTCTGG+AGG | + | chr4_4:4246332-4246351 | None:intergenic | 50.0% | |
| GCTTGGTTCCCAAGCAACAA+TGG | + | chr4_4:4246461-4246480 | None:intergenic | 50.0% | |
| CAAGGAATGAGTGCCTTCTC+TGG | - | chr4_4:4247344-4247363 | Msa0664950:intron | 50.0% | |
| GAGAGATGTCCTGGGATTCA+TGG | - | chr4_4:4247395-4247414 | Msa0664950:intron | 50.0% | |
| AGATGTCCTGGGATTCATGG+AGG | - | chr4_4:4247398-4247417 | Msa0664950:intron | 50.0% | |
| AGGGCAAGCTTCTGTAATCC+TGG | + | chr4_4:4248817-4248836 | None:intergenic | 50.0% | |
| GCTGTTGGAAATGGTAGTCG+GGG | - | chr4_4:4249419-4249438 | Msa0664950:intron | 50.0% | |
| ! | AGTTTGAGGGAGGAGTGCAA+GGG | + | chr4_4:4249475-4249494 | None:intergenic | 50.0% |
| GTGACAAGACAGTTTGAGGG+AGG | + | chr4_4:4249485-4249504 | None:intergenic | 50.0% | |
| ! | GAAGGATTGGTGAACTTGGC+AGG | - | chr4_4:4250242-4250261 | Msa0664950:intron | 50.0% |
| CGAGATTGCATGTGTTGGGA+TGG | - | chr4_4:4250356-4250375 | Msa0664950:CDS | 50.0% | |
| TCCTATTGGGGCTCACCATT+TGG | - | chr4_4:4251104-4251123 | Msa0664950:intron | 50.0% | |
| CTTAAGGAGTTGGAGGTCCT+GGG | + | chr4_4:4251726-4251745 | None:intergenic | 50.0% | |
| GCTAAGGCTTAAGGAGTTGG+AGG | + | chr4_4:4251733-4251752 | None:intergenic | 50.0% | |
| GCAGAAGCCTAGAAAACCAG+AGG | + | chr4_4:4252170-4252189 | None:intergenic | 50.0% | |
| GCGCTAGGATCACAGATGTT+GGG | - | chr4_4:4252264-4252283 | Msa0664950:CDS | 50.0% | |
| TCCTTGGAAATATGCAGCGG+TGG | - | chr4_4:4252862-4252881 | Msa0664950:intron | 50.0% | |
| TCCACCGCTGCATATTTCCA+AGG | + | chr4_4:4252866-4252885 | None:intergenic | 50.0% | |
| GCATGCAACGACAATGTGTC+AGG | - | chr4_4:4253360-4253379 | Msa0664950:five_prime_UTR | 50.0% | |
| AAACACCAGCAGAAAGCAGG+CGG | + | chr4_4:4253397-4253416 | None:intergenic | 50.0% | |
| GGTAAACACCAGCAGAAAGC+AGG | + | chr4_4:4253400-4253419 | None:intergenic | 50.0% | |
| CAAATGCTGCAGTCCAGTAG+AGG | + | chr4_4:4253838-4253857 | None:intergenic | 50.0% | |
| GGCCGAAAGCTTACCAAGTT+TGG | + | chr4_4:4253948-4253967 | None:intergenic | 50.0% | |
| AAGCTTTCGGCCAGAGTAGT+TGG | - | chr4_4:4253956-4253975 | Msa0664950:intron | 50.0% | |
| TTCGGCCAGAGTAGTTGGTT+TGG | - | chr4_4:4253961-4253980 | Msa0664950:intron | 50.0% | |
| ! | TCGGCCAGAGTAGTTGGTTT+GGG | - | chr4_4:4253962-4253981 | Msa0664950:intron | 50.0% |
| AACGAGCCACGTCACATTCG+CGG | - | chr4_4:4243820-4243839 | Msa0664950:three_prime_UTR | 55.0% | |
| CGTGTTCGAGGAAGCAAGAG+CGG | - | chr4_4:4244772-4244791 | Msa0664950:intron | 55.0% | |
| GTGTTCGAGGAAGCAAGAGC+GGG | - | chr4_4:4244773-4244792 | Msa0664950:intron | 55.0% | |
| !! | CTGGAGGGCACCAAGTCTTT+AGG | + | chr4_4:4246213-4246232 | None:intergenic | 55.0% |
| !! | AAGACTTGGTGCCCTCCAGA+AGG | - | chr4_4:4246214-4246233 | Msa0664950:intron | 55.0% |
| !! | AGACTTGGTGCCCTCCAGAA+GGG | - | chr4_4:4246215-4246234 | Msa0664950:intron | 55.0% |
| GTCCCAAGACTCGTGCTTAG+GGG | - | chr4_4:4246267-4246286 | Msa0664950:intron | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | - | chr4_4:4246268-4246287 | Msa0664950:intron | 55.0% | |
| GGCATAGAAGCCCTCCAGAA+AGG | - | chr4_4:4246318-4246337 | Msa0664950:intron | 55.0% | |
| GGGAGCCTAAGCCTTTCTAG+AGG | + | chr4_4:4246352-4246371 | None:intergenic | 55.0% | |
| CCTGCTATGGGCTTGGGTTT+CGG | + | chr4_4:4246486-4246505 | None:intergenic | 55.0% | |
| ACAGTGCCTCCATGAATCCC+AGG | + | chr4_4:4247407-4247426 | None:intergenic | 55.0% | |
| TTTCTCGGGTGGGAGAGTAG+TGG | - | chr4_4:4249240-4249259 | Msa0664950:CDS | 55.0% | |
| TTCTCGGGTGGGAGAGTAGT+GGG | - | chr4_4:4249241-4249260 | Msa0664950:CDS | 55.0% | |
| !! | TATTGGGGGCGCCCCAATAT+TGG | + | chr4_4:4249310-4249329 | None:intergenic | 55.0% |
| ! | CAGTTTGAGGGAGGAGTGCA+AGG | + | chr4_4:4249476-4249495 | None:intergenic | 55.0% |
| TTTGACAGTGCAGGGAGCTC+TGG | + | chr4_4:4249709-4249728 | None:intergenic | 55.0% | |
| GCCAAATGGTGAGCCCCAAT+AGG | + | chr4_4:4251108-4251127 | None:intergenic | 55.0% | |
| CCTGGGTTCAAACCCGGAAA+AGG | + | chr4_4:4251709-4251728 | None:intergenic | 55.0% | |
| ! | CCTTTTCCGGGTTTGAACCC+AGG | - | chr4_4:4251706-4251725 | Msa0664950:intron | 55.0% |
| GCTTAAGGAGTTGGAGGTCC+TGG | + | chr4_4:4251727-4251746 | None:intergenic | 55.0% | |
| GGCGCTAGGATCACAGATGT+TGG | - | chr4_4:4252263-4252282 | Msa0664950:CDS | 55.0% | |
| !! | AGCGGTGGATTGACTGATGC+TGG | - | chr4_4:4252877-4252896 | Msa0664950:intron | 55.0% |
| AATTTCAGGGCTCACCGCGT+TGG | - | chr4_4:4253782-4253801 | Msa0664950:intron | 55.0% | |
| GCGACCCAAACCAACTACTC+TGG | + | chr4_4:4253969-4253988 | None:intergenic | 55.0% | |
| !! | ATGGGACTGGCCCTTCTGGA+GGG | + | chr4_4:4246228-4246247 | None:intergenic | 60.0% |
| !! | TATGGGACTGGCCCTTCTGG+AGG | + | chr4_4:4246229-4246248 | None:intergenic | 60.0% |
| GCCCCCTAAGCACGAGTCTT+GGG | + | chr4_4:4246272-4246291 | None:intergenic | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | + | chr4_4:4246273-4246292 | None:intergenic | 60.0% | |
| AGGCTTAGGCTCCCTCCAGA+AGG | - | chr4_4:4246358-4246377 | Msa0664950:intron | 60.0% | |
| GGCTTAGGCTCCCTCCAGAA+GGG | - | chr4_4:4246359-4246378 | Msa0664950:intron | 60.0% | |
| CAAAGCCTCAGGAGCCCTTC+TGG | + | chr4_4:4246376-4246395 | None:intergenic | 60.0% | |
| CAGAAGGGCTCCTGAGGCTT+TGG | - | chr4_4:4246374-4246393 | Msa0664950:intron | 60.0% | |
| TTTAGAAGGGCGGCGCCCTA+AGG | + | chr4_4:4246408-4246427 | None:intergenic | 60.0% | |
| GGGCTTGGGTTTCGGTTGCT+TGG | + | chr4_4:4246478-4246497 | None:intergenic | 60.0% | |
| CCGAAACCCAAGCCCATAGC+AGG | - | chr4_4:4246483-4246502 | Msa0664950:intron | 60.0% | |
| ! | TGAGGGAGGAGTGCAAGGGT+TGG | + | chr4_4:4249471-4249490 | None:intergenic | 60.0% |
| GGAGGTCCTGGGTTCAAACC+CGG | + | chr4_4:4251715-4251734 | None:intergenic | 60.0% | |
| GCAGAAAGCAGGCGGCTCAA+TGG | + | chr4_4:4253389-4253408 | None:intergenic | 60.0% | |
| TTGAGCCGCCTGCTTTCTGC+TGG | - | chr4_4:4253389-4253408 | Msa0664950:five_prime_UTR | 60.0% | |
| CGATGGGTGGTGCGTGTTCG+AGG | - | chr4_4:4244760-4244779 | Msa0664950:intron | 65.0% | |
| TCCCTCCAGAAGGGCTCCTG+AGG | - | chr4_4:4246368-4246387 | Msa0664950:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | chr4_4:4246372-4246391 | None:intergenic | 65.0% | |
| AGCCTCAGGAGCCCTTCTGG+AGG | + | chr4_4:4246373-4246392 | None:intergenic | 65.0% | |
| GCTTTGGCGCGCTCGCCTTA+GGG | - | chr4_4:4246390-4246409 | Msa0664950:intron | 65.0% | |
| ! | GGCTTTGGCGCGCTCGCCTT+AGG | - | chr4_4:4246389-4246408 | Msa0664950:intron | 70.0% |
| GGCGAGCGCGCCAAAGCCTC+AGG | + | chr4_4:4246387-4246406 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 4243817 | 4254262 | 4243817 | ID=Msa0664950;Name=Msa0664950 |
| chr4_4 | mRNA | 4243817 | 4254262 | 4243817 | ID=Msa0664950-mRNA-1;Parent=Msa0664950;Name=Msa0664950-mRNA-1;_AED=0.26;_eAED=0.26;_QI=318|0.92|1|1|0.92|0.86|15|288|534 |
| chr4_4 | exon | 4243817 | 4244289 | 4243817 | ID=Msa0664950-mRNA-1:exon:1428;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4245088 | 4245234 | 4245088 | ID=Msa0664950-mRNA-1:exon:1427;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4245777 | 4245848 | 4245777 | ID=Msa0664950-mRNA-1:exon:1426;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4246526 | 4246669 | 4246526 | ID=Msa0664950-mRNA-1:exon:1425;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4247124 | 4247195 | 4247124 | ID=Msa0664950-mRNA-1:exon:1424;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4247816 | 4247887 | 4247816 | ID=Msa0664950-mRNA-1:exon:1423;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4248078 | 4248149 | 4248078 | ID=Msa0664950-mRNA-1:exon:1422;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4248298 | 4248369 | 4248298 | ID=Msa0664950-mRNA-1:exon:1421;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4249190 | 4249261 | 4249190 | ID=Msa0664950-mRNA-1:exon:1420;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4249820 | 4249891 | 4249820 | ID=Msa0664950-mRNA-1:exon:1419;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4250332 | 4250406 | 4250332 | ID=Msa0664950-mRNA-1:exon:1418;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4250642 | 4250788 | 4250642 | ID=Msa0664950-mRNA-1:exon:1417;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4252242 | 4252449 | 4252242 | ID=Msa0664950-mRNA-1:exon:1416;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4253123 | 4253420 | 4253123 | ID=Msa0664950-mRNA-1:exon:1415;Parent=Msa0664950-mRNA-1 |
| chr4_4 | exon | 4254048 | 4254262 | 4254048 | ID=Msa0664950-mRNA-1:exon:1414;Parent=Msa0664950-mRNA-1 |
| chr4_4 | five_prime_UTR | 4254048 | 4254262 | 4254048 | ID=Msa0664950-mRNA-1:five_prime_utr;Parent=Msa0664950-mRNA-1 |
| chr4_4 | five_prime_UTR | 4253318 | 4253420 | 4253318 | ID=Msa0664950-mRNA-1:five_prime_utr;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4253123 | 4253317 | 4253123 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4252242 | 4252449 | 4252242 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4250642 | 4250788 | 4250642 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4250332 | 4250406 | 4250332 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4249820 | 4249891 | 4249820 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4249190 | 4249261 | 4249190 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4248298 | 4248369 | 4248298 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4248078 | 4248149 | 4248078 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4247816 | 4247887 | 4247816 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4247124 | 4247195 | 4247124 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4246526 | 4246669 | 4246526 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4245777 | 4245848 | 4245777 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4245088 | 4245234 | 4245088 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | CDS | 4244105 | 4244289 | 4244105 | ID=Msa0664950-mRNA-1:cds;Parent=Msa0664950-mRNA-1 |
| chr4_4 | three_prime_UTR | 4243817 | 4244104 | 4243817 | ID=Msa0664950-mRNA-1:three_prime_utr;Parent=Msa0664950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
