Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336050 | XP_003596850.2 | 92.844 | 531 | 16 | 1 | 1 | 509 | 1 | 531 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336050 | sp|Q9XIP2|OTU6_ARATH | 62.727 | 440 | 136 | 5 | 96 | 509 | 68 | 505 | 9.06e-166 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0336050 | 0.831546 | 1.569775e-55 | -8.615850e-47 |
| Msa0003220 | Msa0336050 | 0.828913 | 6.901905e-55 | -8.615850e-47 |
| Msa0003270 | Msa0336050 | 0.827600 | 1.430111e-54 | -8.615850e-47 |
| Msa0010770 | Msa0336050 | 0.834642 | 2.663376e-56 | -8.615850e-47 |
| Msa0026660 | Msa0336050 | 0.804801 | 1.814839e-49 | -8.615850e-47 |
| Msa0031180 | Msa0336050 | 0.809720 | 1.645841e-50 | -8.615850e-47 |
| Msa0037120 | Msa0336050 | 0.813847 | 2.080201e-51 | -8.615850e-47 |
| Msa0038870 | Msa0336050 | 0.812151 | 4.898087e-51 | -8.615850e-47 |
| Msa0041690 | Msa0336050 | 0.800380 | 1.481050e-48 | -8.615850e-47 |
| Msa0055660 | Msa0336050 | 0.806194 | 9.261917e-50 | -8.615850e-47 |
| Msa0064920 | Msa0336050 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0076780 | Msa0336050 | 0.807577 | 4.722080e-50 | -8.615850e-47 |
| Msa0077900 | Msa0336050 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0078480 | Msa0336050 | 0.830703 | 2.529979e-55 | -8.615850e-47 |
| Msa0084340 | Msa0336050 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0097950 | Msa0336050 | 0.807609 | 4.649100e-50 | -8.615850e-47 |
| Msa0127040 | Msa0336050 | 0.827244 | 1.741166e-54 | -8.615850e-47 |
| Msa0131700 | Msa0336050 | 0.808059 | 3.730576e-50 | -8.615850e-47 |
| Msa0138210 | Msa0336050 | 0.809555 | 1.785831e-50 | -8.615850e-47 |
| Msa0143850 | Msa0336050 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0177170 | Msa0336050 | 0.824413 | 8.182430e-54 | -8.615850e-47 |
| Msa0183420 | Msa0336050 | 0.818823 | 1.602739e-52 | -8.615850e-47 |
| Msa0202730 | Msa0336050 | 0.804791 | 1.822880e-49 | -8.615850e-47 |
| Msa0210260 | Msa0336050 | 0.811534 | 6.673983e-51 | -8.615850e-47 |
| Msa0223330 | Msa0336050 | 0.807410 | 5.123842e-50 | -8.615850e-47 |
| Msa0237200 | Msa0336050 | 0.844592 | 6.872753e-59 | -8.615850e-47 |
| Msa0244970 | Msa0336050 | 0.831082 | 2.042386e-55 | -8.615850e-47 |
| Msa0244980 | Msa0336050 | 0.816922 | 4.308469e-52 | -8.615850e-47 |
| Msa0247060 | Msa0336050 | 0.836733 | 7.871659e-57 | -8.615850e-47 |
| Msa0271790 | Msa0336050 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0274970 | Msa0336050 | 0.836946 | 6.946301e-57 | -8.615850e-47 |
| Msa0280110 | Msa0336050 | 0.807670 | 4.513680e-50 | -8.615850e-47 |
| Msa0298300 | Msa0336050 | 0.904066 | 1.808954e-79 | -8.615850e-47 |
| Msa0308440 | Msa0336050 | 0.806772 | 6.994617e-50 | -8.615850e-47 |
| Msa0311720 | Msa0336050 | 0.811647 | 6.305857e-51 | -8.615850e-47 |
| Msa0315680 | Msa0336050 | 0.836336 | 9.933258e-57 | -8.615850e-47 |
| Msa0321690 | Msa0336050 | 0.802911 | 4.480230e-49 | -8.615850e-47 |
| Msa0324240 | Msa0336050 | 0.823517 | 1.327176e-53 | -8.615850e-47 |
| Msa0336050 | Msa0339910 | 0.822764 | 1.989180e-53 | -8.615850e-47 |
| Msa0336050 | Msa0363060 | 0.818291 | 2.116778e-52 | -8.615850e-47 |
| Msa0336050 | Msa0363640 | 0.810361 | 1.197590e-50 | -8.615850e-47 |
| Msa0336050 | Msa0376020 | 0.838442 | 2.869042e-57 | -8.615850e-47 |
| Msa0336050 | Msa0381000 | 0.810104 | 1.360541e-50 | -8.615850e-47 |
| Msa0336050 | Msa0381080 | 0.803649 | 3.151282e-49 | -8.615850e-47 |
| Msa0336050 | Msa0387050 | 0.804520 | 2.076677e-49 | -8.615850e-47 |
| Msa0336050 | Msa0395980 | 0.813435 | 2.562964e-51 | -8.615850e-47 |
| Msa0336050 | Msa0417650 | 0.807564 | 4.752702e-50 | -8.615850e-47 |
| Msa0336050 | Msa0442310 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa0336050 | Msa0458640 | 0.841112 | 5.789181e-58 | -8.615850e-47 |
| Msa0336050 | Msa0491000 | 0.814399 | 1.571621e-51 | -8.615850e-47 |
| Msa0336050 | Msa0516020 | 0.839136 | 1.897994e-57 | -8.615850e-47 |
| Msa0336050 | Msa0555640 | 0.817164 | 3.800095e-52 | -8.615850e-47 |
| Msa0336050 | Msa0580640 | 0.818221 | 2.194597e-52 | -8.615850e-47 |
| Msa0336050 | Msa0614510 | 0.821152 | 4.699678e-53 | -8.615850e-47 |
| Msa0336050 | Msa0628290 | 0.801905 | 7.222613e-49 | -8.615850e-47 |
| Msa0336050 | Msa0679100 | 0.805957 | 1.038630e-49 | -8.615850e-47 |
| Msa0336050 | Msa0687230 | 0.815317 | 9.835437e-52 | -8.615850e-47 |
| Msa0336050 | Msa0698210 | 0.802377 | 5.774784e-49 | -8.615850e-47 |
| Msa0336050 | Msa0705390 | 0.805904 | 1.065731e-49 | -8.615850e-47 |
| Msa0336050 | Msa0752700 | 0.808906 | 2.459686e-50 | -8.615850e-47 |
| Msa0336050 | Msa0756110 | 0.806251 | 9.005321e-50 | -8.615850e-47 |
| Msa0336050 | Msa0781270 | 0.802422 | 5.652856e-49 | -8.615850e-47 |
| Msa0336050 | Msa0789560 | 0.803061 | 4.171707e-49 | -8.615850e-47 |
| Msa0336050 | Msa0795660 | 0.830537 | 2.777242e-55 | -8.615850e-47 |
| Msa0336050 | Msa0820200 | 0.820069 | 8.333703e-53 | -8.615850e-47 |
| Msa0336050 | Msa0831100 | 0.810420 | 1.162872e-50 | -8.615850e-47 |
| Msa0336050 | Msa0869010 | 0.829188 | 5.918974e-55 | -8.615850e-47 |
| Msa0336050 | Msa0870650 | 0.834113 | 3.616502e-56 | -8.615850e-47 |
| Msa0336050 | Msa0883520 | 0.807250 | 5.539900e-50 | -8.615850e-47 |
| Msa0336050 | Msa0898660 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
| Msa0336050 | Msa0937050 | 0.828259 | 9.928822e-55 | -8.615850e-47 |
| Msa0336050 | Msa0958030 | 0.816566 | 5.175748e-52 | -8.615850e-47 |
| Msa0336050 | Msa0980940 | 0.809439 | 1.891113e-50 | -8.615850e-47 |
| Msa0336050 | Msa0985220 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa0336050 | Msa1009750 | 0.809287 | 2.038377e-50 | -8.615850e-47 |
| Msa0336050 | Msa1027250 | 0.809136 | 2.196869e-50 | -8.615850e-47 |
| Msa0336050 | Msa1027300 | 0.807419 | 5.101830e-50 | -8.615850e-47 |
| Msa0336050 | Msa1027360 | 0.809142 | 2.190055e-50 | -8.615850e-47 |
| Msa0336050 | Msa1036740 | 0.833485 | 5.191898e-56 | -8.615850e-47 |
| Msa0336050 | Msa1077070 | 0.822530 | 2.255109e-53 | -8.615850e-47 |
| Msa0336050 | Msa1080150 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0336050 | Msa1080270 | 0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0336050 | Msa1097820 | 0.816996 | 4.144801e-52 | -8.615850e-47 |
| Msa0336050 | Msa1098890 | 0.823678 | 1.217251e-53 | -8.615850e-47 |
| Msa0336050 | Msa1122780 | 0.837302 | 5.631558e-57 | -8.615850e-47 |
| Msa0336050 | Msa1123350 | 0.803491 | 3.399378e-49 | -8.615850e-47 |
| Msa0336050 | Msa1127430 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0336050 | Msa1130530 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0336050 | Msa1163870 | 0.818458 | 1.939689e-52 | -8.615850e-47 |
| Msa0336050 | Msa1174850 | 0.818308 | 2.097409e-52 | -8.615850e-47 |
| Msa0336050 | Msa1176360 | 0.817657 | 2.943783e-52 | -8.615850e-47 |
| Msa0336050 | Msa1199710 | 0.812948 | 3.278842e-51 | -8.615850e-47 |
| Msa0336050 | Msa1201640 | 0.814524 | 1.474929e-51 | -8.615850e-47 |
| Msa0336050 | Msa1201810 | 0.836383 | 9.665821e-57 | -8.615850e-47 |
| Msa0336050 | Msa1202580 | 0.803901 | 2.793453e-49 | -8.615850e-47 |
| Msa0336050 | Msa1205480 | 0.803131 | 4.036394e-49 | -8.615850e-47 |
| Msa0336050 | Msa1211340 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0336050 | Msa1211830 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0336050 | Msa1259640 | 0.819301 | 1.248185e-52 | -8.615850e-47 |
| Msa0336050 | Msa1296300 | 0.808252 | 3.393796e-50 | -8.615850e-47 |
| Msa0336050 | Msa1299700 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0336050 | Msa1320820 | 0.822952 | 1.798716e-53 | -8.615850e-47 |
| Msa0336050 | Msa1329450 | 0.814849 | 1.249163e-51 | -8.615850e-47 |
| Msa0336050 | Msa1329790 | 0.823917 | 1.070104e-53 | -8.615850e-47 |
| Msa0336050 | Msa1332220 | 0.802555 | 5.306585e-49 | -8.615850e-47 |
| Msa0336050 | Msa1336040 | 0.813214 | 2.867034e-51 | -8.615850e-47 |
| Msa0336050 | Msa1341490 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
| Msa0336050 | Msa1356610 | 0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0336050 | Msa1393800 | 0.821642 | 3.622346e-53 | -8.615850e-47 |
| Msa0336050 | Msa1424780 | 0.808789 | 2.606221e-50 | -8.615850e-47 |
| Msa0336050 | Msa1433600 | 0.822569 | 2.208467e-53 | -8.615850e-47 |
| Msa0336050 | Msa1437330 | 0.815583 | 8.583522e-52 | -8.615850e-47 |
| Msa0336050 | Msa1448490 | 0.822283 | 2.573382e-53 | -8.615850e-47 |
| Msa0336050 | Msa1450720 | 0.851077 | 1.122509e-60 | -8.615850e-47 |
| Msa0336050 | Msa1454960 | 0.806375 | 8.482851e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336050 | MtrunA17_Chr2g0321691 | 92.844 | 531 | 16 | 1 | 1 | 509 | 1 | 531 | 0.0 | 998 |
| Msa0336050 | MtrunA17_Chr4g0053171 | 34.127 | 126 | 76 | 3 | 242 | 363 | 40 | 162 | 3.47e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336050 | AT2G27350.1 | 62.727 | 440 | 136 | 5 | 96 | 509 | 68 | 505 | 9.21e-167 | 481 |
| Msa0336050 | AT2G27350.2 | 62.727 | 440 | 136 | 5 | 96 | 509 | 68 | 505 | 9.21e-167 | 481 |
| Msa0336050 | AT2G27350.3 | 62.358 | 441 | 137 | 6 | 96 | 509 | 68 | 506 | 3.71e-164 | 475 |
| Msa0336050 | AT2G27350.4 | 62.358 | 441 | 137 | 6 | 96 | 509 | 68 | 506 | 3.71e-164 | 475 |
| Msa0336050 | AT2G27350.6 | 62.358 | 441 | 137 | 6 | 96 | 509 | 68 | 506 | 3.71e-164 | 475 |
| Msa0336050 | AT2G27350.5 | 62.358 | 441 | 137 | 6 | 96 | 509 | 68 | 506 | 3.71e-164 | 475 |
| Msa0336050 | AT5G67170.2 | 33.094 | 139 | 83 | 3 | 242 | 371 | 36 | 173 | 3.42e-16 | 80.9 |
| Msa0336050 | AT5G67170.1 | 33.094 | 139 | 83 | 3 | 242 | 371 | 36 | 173 | 3.42e-16 | 80.9 |
Find 186 sgRNAs with CRISPR-Local
Find 491 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCCTTTCTGGCAGGTTTA+TGG | 0.130034 | 2_4:-55315182 | Msa0336050:intron |
| GATTATTGAAATTAAGAAAT+TGG | 0.166641 | 2_4:+55319927 | None:intergenic |
| ATTGAGGCATACAGCATATT+TGG | 0.176533 | 2_4:-55313995 | Msa0336050:CDS |
| AAATGAAGACTTTCCATTAA+AGG | 0.214610 | 2_4:+55319263 | None:intergenic |
| GGATATTCATTTATTCGATT+TGG | 0.237876 | 2_4:+55313840 | None:intergenic |
| ATTGATATTAGAAGGGTAAA+AGG | 0.272382 | 2_4:-55318215 | Msa0336050:CDS |
| ATTATTGAAATTAAGAAATT+GGG | 0.275489 | 2_4:+55319928 | None:intergenic |
| TTCTTTCCCGCTTTCCATCC+TGG | 0.281897 | 2_4:+55314084 | None:intergenic |
| ACCCTTTCTGGCAGGTTTAT+GGG | 0.298664 | 2_4:-55315181 | Msa0336050:intron |
| GAACACGCGATAAGCTCTTT+TGG | 0.302071 | 2_4:-55319546 | Msa0336050:five_prime_UTR |
| CCCACAATTGGTGCAGGACT+TGG | 0.302410 | 2_4:-55314902 | Msa0336050:CDS |
| AATGAAGACTTTCCATTAAA+GGG | 0.311292 | 2_4:+55319264 | None:intergenic |
| TTGAGGCATACAGCATATTT+GGG | 0.322519 | 2_4:-55313994 | Msa0336050:CDS |
| TCCTTTAGGAAATGAAGTTT+TGG | 0.330217 | 2_4:-55319219 | Msa0336050:CDS |
| AATGATACGCATACTCCTTT+AGG | 0.333180 | 2_4:-55319233 | Msa0336050:CDS |
| CAAATCTATTATACATTGTA+TGG | 0.334605 | 2_4:-55313676 | Msa0336050:three_prime_UTR |
| AGTTTGAAATTGATATTAGA+AGG | 0.344316 | 2_4:-55318223 | Msa0336050:CDS |
| TTCTATGATTTGTTACTTGT+TGG | 0.348240 | 2_4:-55313960 | Msa0336050:CDS |
| GCAGATGAGCGTAGATTATA+TGG | 0.348920 | 2_4:-55318096 | Msa0336050:intron |
| GAGCCTATCAATACATTTCA+TGG | 0.353732 | 2_4:-55315007 | Msa0336050:CDS |
| CATACAATGTATAATAGATT+TGG | 0.356783 | 2_4:+55313677 | None:intergenic |
| TCTTTCCCGCTTTCCATCCT+GGG | 0.361840 | 2_4:+55314085 | None:intergenic |
| AGTATGCTGGGAGTAGTAAT+AGG | 0.363405 | 2_4:-55319301 | Msa0336050:CDS |
| AAAGAGTGATGACCCTTTAA+TGG | 0.366219 | 2_4:-55319276 | Msa0336050:CDS |
| GCAGGTTGCGGTTGCGGAGG+AGG | 0.366993 | 2_4:-55319753 | Msa0336050:intron |
| GAAAGTGGAGAGGAGGAGCT+TGG | 0.377608 | 2_4:-55319350 | Msa0336050:CDS |
| TCGGCTAGGACTTCGCCTGC+TGG | 0.378489 | 2_4:-55318936 | Msa0336050:CDS |
| GACCCACGGCGTCCCACAAT+TGG | 0.381817 | 2_4:-55314914 | Msa0336050:CDS |
| GGTGGAACAGGTGGAGGTGG+AGG | 0.383817 | 2_4:+55319068 | None:intergenic |
| TTATCGCGTGTTCTTGCCTT+GGG | 0.384400 | 2_4:+55319556 | None:intergenic |
| TTGCCGTGATGGAAGCTTCT+CGG | 0.388388 | 2_4:-55314375 | Msa0336050:CDS |
| GGACTCGGAATTGTATGATT+TGG | 0.388972 | 2_4:-55318123 | Msa0336050:CDS |
| GATGATGTTGTGGAGTATGC+TGG | 0.388990 | 2_4:-55319314 | Msa0336050:CDS |
| GAAGAAGACCCAGCACGATT+AGG | 0.394372 | 2_4:+55319422 | None:intergenic |
| AAGAAGACCCAGCACGATTA+GGG | 0.398736 | 2_4:+55319423 | None:intergenic |
| CTTATCGCGTGTTCTTGCCT+TGG | 0.401576 | 2_4:+55319555 | None:intergenic |
| CTTCCATGAAATGTATTGAT+AGG | 0.401908 | 2_4:+55315004 | None:intergenic |
| GTGGTTGCAGGTTGCGGTTG+CGG | 0.403972 | 2_4:-55319759 | Msa0336050:intron |
| TGCCGTGATGGAAGCTTCTC+GGG | 0.407832 | 2_4:-55314374 | Msa0336050:CDS |
| TCTCTTCCTCTTACAGTATG+AGG | 0.408181 | 2_4:+55316788 | None:intergenic |
| GACCCAGCACGATTAGGGTT+AGG | 0.414072 | 2_4:+55319428 | None:intergenic |
| TGTATGCCTCAATCGCTTGT+AGG | 0.415074 | 2_4:+55314005 | None:intergenic |
| AAGTTAGTTGATGAAGGCTT+TGG | 0.423312 | 2_4:+55319044 | None:intergenic |
| ATTTGTTACTTGTTGGAAAC+TGG | 0.424650 | 2_4:-55313953 | Msa0336050:CDS |
| GAAGGCTTTGGAGGTGGAAC+AGG | 0.425435 | 2_4:+55319056 | None:intergenic |
| TCTCGGGCTGAATACCTTGC+CGG | 0.426700 | 2_4:-55314358 | Msa0336050:CDS |
| TTGGGTTCAGCTCTCTTCGT+GGG | 0.428248 | 2_4:-55314883 | Msa0336050:CDS |
| GAGGAGCTTGGATTGGTTGT+TGG | 0.431403 | 2_4:-55319338 | Msa0336050:CDS |
| CCTGTTGTTAGCGGCGGTGG+TGG | 0.434182 | 2_4:-55319098 | Msa0336050:CDS |
| TGCGTGGCCTGTTGTTGTTT+CGG | 0.437622 | 2_4:-55318955 | Msa0336050:CDS |
| CGGAATTGTATGATTTGGTC+AGG | 0.440131 | 2_4:-55318118 | Msa0336050:CDS |
| CCACCACCGCCGCTAACAAC+AGG | 0.442430 | 2_4:+55319098 | None:intergenic |
| TGGAGAGGAGGAGCTTGGAT+TGG | 0.445208 | 2_4:-55319345 | Msa0336050:CDS |
| ATGTGAGTTGCAGGATCGTC+AGG | 0.447330 | 2_4:-55314115 | Msa0336050:intron |
| ACTGCTGAGCCATCTTCCTC+TGG | 0.448459 | 2_4:-55314289 | Msa0336050:CDS |
| GAATTTAAGTTAGTTGATGA+AGG | 0.450932 | 2_4:+55319038 | None:intergenic |
| TATACATTTCACACATGGCT+TGG | 0.451765 | 2_4:+55315144 | None:intergenic |
| CCCAAGTCCTGCACCAATTG+TGG | 0.451802 | 2_4:+55314901 | None:intergenic |
| AATCCTGTTGTTAGCGGCGG+TGG | 0.451884 | 2_4:-55319101 | Msa0336050:CDS |
| ACCCAGCACGATTAGGGTTA+GGG | 0.453125 | 2_4:+55319429 | None:intergenic |
| AATTCAAGAAGGAGTGCATC+GGG | 0.454425 | 2_4:-55319020 | Msa0336050:CDS |
| CGGCTAGGACTTCGCCTGCT+GGG | 0.458808 | 2_4:-55318935 | Msa0336050:CDS |
| GAGTAGGAGTATATATGAAT+AGG | 0.459015 | 2_4:+55315116 | None:intergenic |
| GTTCAACGTGGTTCTTCTGC+TGG | 0.459785 | 2_4:-55319482 | Msa0336050:CDS |
| AACCCTAACCCTAATCGTGC+TGG | 0.461432 | 2_4:-55319431 | Msa0336050:CDS |
| ACTTACTACATCATCATAAG+AGG | 0.463060 | 2_4:+55318833 | None:intergenic |
| GTTGATGAAGGCTTTGGAGG+TGG | 0.469803 | 2_4:+55319050 | None:intergenic |
| GAGAGTGGCACGTGAGATAG+AGG | 0.471351 | 2_4:+55320047 | None:intergenic |
| GATCCTGCATTAACAGCATT+AGG | 0.471649 | 2_4:+55318993 | None:intergenic |
| TAATCGTGCTGGGTCTTCTT+CGG | 0.472975 | 2_4:-55319420 | Msa0336050:CDS |
| ACCAAAACTTCATTTCCTAA+AGG | 0.474508 | 2_4:+55319218 | None:intergenic |
| GGTCTCGACCTTCATCTCCC+CGG | 0.476006 | 2_4:-55318914 | Msa0336050:CDS |
| GTCTCGACCTTCATCTCCCC+GGG | 0.476186 | 2_4:-55318913 | Msa0336050:CDS |
| CACGTCTTTAGGAGCGGGAG+AGG | 0.481120 | 2_4:-55316845 | Msa0336050:intron |
| GGTCTGCAACAGCACGGAAA+AGG | 0.483309 | 2_4:+55318156 | None:intergenic |
| CTGTGTAACGTGCTCCGGCC+GGG | 0.484018 | 2_4:+55319397 | None:intergenic |
| GGAGGTGGAACAGGTGGAGG+TGG | 0.486650 | 2_4:+55319065 | None:intergenic |
| CTTCACTTTCACTATGAGCC+CGG | 0.486820 | 2_4:+55318895 | None:intergenic |
| TGGGTCTTCTTCGGCCCGGC+CGG | 0.487424 | 2_4:-55319411 | Msa0336050:CDS |
| ATCTCTCATATATCAAACTT+AGG | 0.489702 | 2_4:+55313722 | None:intergenic |
| TTAGTTGATGAAGGCTTTGG+AGG | 0.490951 | 2_4:+55319047 | None:intergenic |
| GTATGCTGGGAGTAGTAATA+GGG | 0.491306 | 2_4:-55319300 | Msa0336050:CDS |
| TTTGGAGGTGGAACAGGTGG+AGG | 0.494963 | 2_4:+55319062 | None:intergenic |
| TTCACTTTCACTATGAGCCC+GGG | 0.495969 | 2_4:+55318896 | None:intergenic |
| CCACAATTGGTGCAGGACTT+GGG | 0.496349 | 2_4:-55314901 | Msa0336050:CDS |
| GATGTTAAAGAAGAGGTTGA+GGG | 0.497092 | 2_4:-55319179 | Msa0336050:CDS |
| GGCTTTGGAGGTGGAACAGG+TGG | 0.497303 | 2_4:+55319059 | None:intergenic |
| TGCACCTGTGTAACGTGCTC+CGG | 0.499439 | 2_4:+55319392 | None:intergenic |
| GGAAATTGAACTTGCCGTGA+TGG | 0.500131 | 2_4:-55314386 | Msa0336050:CDS |
| CTTGGGTTCAGCTCTCTTCG+TGG | 0.501925 | 2_4:-55314884 | Msa0336050:CDS |
| TAGTTACCTACAAGCGATTG+AGG | 0.502638 | 2_4:-55314011 | Msa0336050:CDS |
| CCTGTGTAACGTGCTCCGGC+CGG | 0.503618 | 2_4:+55319396 | None:intergenic |
| AAATCGTTCAGCAAAGGCAT+TGG | 0.506180 | 2_4:-55319589 | Msa0336050:five_prime_UTR |
| CATGAATATGTTACTGTCGA+TGG | 0.506460 | 2_4:-55314038 | Msa0336050:CDS |
| TAAGAGGAAGAGAAGAGATA+AGG | 0.507324 | 2_4:-55316778 | Msa0336050:intron |
| GCACCAATTGTGGGACGCCG+TGG | 0.510578 | 2_4:+55314911 | None:intergenic |
| CTATGAGCCCGGGGAGATGA+AGG | 0.510791 | 2_4:+55318906 | None:intergenic |
| CCAAGTCCTGCACCAATTGT+GGG | 0.516638 | 2_4:+55314902 | None:intergenic |
| TGATGAAAACTTAGGCGTAC+TGG | 0.517126 | 2_4:+55314962 | None:intergenic |
| CTGTTGCAGACCAAGTGTAC+GGG | 0.517724 | 2_4:-55318145 | Msa0336050:CDS |
| AGATGTTAAAGAAGAGGTTG+AGG | 0.517829 | 2_4:-55319180 | Msa0336050:CDS |
| ATGATGTTGTGGAGTATGCT+GGG | 0.520937 | 2_4:-55319313 | Msa0336050:CDS |
| GTCCTAGCCGAAACAACAAC+AGG | 0.525011 | 2_4:+55318948 | None:intergenic |
| GTTGCAGGTTGCGGTTGCGG+AGG | 0.527495 | 2_4:-55319756 | Msa0336050:intron |
| ATAAGCTCTACCTGTGGAGT+AGG | 0.529541 | 2_4:+55315100 | None:intergenic |
| TCTCCTAATGCTGTTAATGC+AGG | 0.529824 | 2_4:-55318996 | Msa0336050:CDS |
| AGACCAAGTGTACGGGGACT+CGG | 0.533380 | 2_4:-55318138 | Msa0336050:CDS |
| GGTTGTTGGTGATGATGTTG+TGG | 0.533732 | 2_4:-55319324 | Msa0336050:CDS |
| GCTGTTGCAGACCAAGTGTA+CGG | 0.534570 | 2_4:-55318146 | Msa0336050:CDS |
| GTTTGAAATTGATATTAGAA+GGG | 0.536886 | 2_4:-55318222 | Msa0336050:CDS |
| AAACATACTAGAGTAAATAC+AGG | 0.536953 | 2_4:+55313819 | None:intergenic |
| AAGCCCTCGTTCTCTATCAC+TGG | 0.537120 | 2_4:+55319134 | None:intergenic |
| GGTTACCATGATGAAAACTT+AGG | 0.539612 | 2_4:+55314954 | None:intergenic |
| GGTCAACAAGGGAGTTGTAA+TGG | 0.546094 | 2_4:+55314933 | None:intergenic |
| TGGGACGCCGTGGGTCAACA+AGG | 0.546376 | 2_4:+55314921 | None:intergenic |
| ATGAATATGTTACTGTCGAT+GGG | 0.547760 | 2_4:-55314037 | Msa0336050:CDS |
| TAGGCGTACTGGTGGTGTAT+CGG | 0.549271 | 2_4:+55314973 | None:intergenic |
| GATCGTCAGGTAGTGATCCC+AGG | 0.549376 | 2_4:-55314102 | Msa0336050:CDS |
| TTATTGAAATTAAGAAATTG+GGG | 0.549400 | 2_4:+55319929 | None:intergenic |
| CGGCGTCCCACAATTGGTGC+AGG | 0.549910 | 2_4:-55314908 | Msa0336050:CDS |
| TAACTTGCTCCAGAGGAAGA+TGG | 0.550315 | 2_4:+55314280 | None:intergenic |
| GGCCACGCAGATCCTCTCCT+TGG | 0.551230 | 2_4:+55318969 | None:intergenic |
| ACAGGTGCAATCTGTTGCTA+AGG | 0.553828 | 2_4:-55319378 | Msa0336050:CDS |
| GTGATCCCAGGATGGAAAGC+GGG | 0.554336 | 2_4:-55314090 | Msa0336050:CDS |
| GGCCTGTTGTTGTTTCGGCT+AGG | 0.555957 | 2_4:-55318950 | Msa0336050:CDS |
| TGGGAAAGATGTTAAAGAAG+AGG | 0.556245 | 2_4:-55319186 | Msa0336050:CDS |
| TGGCACGTGAGATAGAGGTT+AGG | 0.559249 | 2_4:+55320052 | None:intergenic |
| ATTCCGAGTCCCCGTACACT+TGG | 0.562410 | 2_4:+55318135 | None:intergenic |
| GGCAGCAGTAGCAGACGTAA+AGG | 0.563278 | 2_4:-55313932 | Msa0336050:CDS |
| ACCCTAACCCTAATCGTGCT+GGG | 0.564355 | 2_4:-55319430 | Msa0336050:CDS |
| CAACTAACTTAAATTCAAGA+AGG | 0.565387 | 2_4:-55319031 | Msa0336050:CDS |
| GAGGGTAATCCTGTTGTTAG+CGG | 0.566231 | 2_4:-55319107 | Msa0336050:CDS |
| ACAACTCCCTTGTTGACCCA+CGG | 0.570726 | 2_4:-55314928 | Msa0336050:CDS |
| CACCAATTGTGGGACGCCGT+GGG | 0.574073 | 2_4:+55314912 | None:intergenic |
| GATGAAGGTCGAGACCCAGC+AGG | 0.574826 | 2_4:+55318921 | None:intergenic |
| GTTGCTAAGGATGAAGAAAG+TGG | 0.575080 | 2_4:-55319365 | Msa0336050:CDS |
| AAATCTATTATACATTGTAT+GGG | 0.576003 | 2_4:-55313675 | Msa0336050:three_prime_UTR |
| TCTTCTTTAACATCTTTCCC+AGG | 0.576255 | 2_4:+55319188 | None:intergenic |
| GGATGAAGAAAGTGGAGAGG+AGG | 0.578913 | 2_4:-55319357 | Msa0336050:CDS |
| GAGATATTAACTTGCTCCAG+AGG | 0.579465 | 2_4:+55314273 | None:intergenic |
| GTTTGCAAGAATCGAGGGAA+AGG | 0.580810 | 2_4:-55319157 | Msa0336050:CDS |
| AAATTCAAGAAGGAGTGCAT+CGG | 0.581706 | 2_4:-55319021 | Msa0336050:CDS |
| CATATATACTCCTACTCCAC+AGG | 0.582359 | 2_4:-55315110 | Msa0336050:intron |
| TCATAAGAGGACACATAGCA+TGG | 0.582849 | 2_4:+55318846 | None:intergenic |
| GGTACATTTAAGCAACAACT+TGG | 0.583320 | 2_4:-55314334 | Msa0336050:CDS |
| TTGTTGCTTAAATGTACCAC+CGG | 0.583828 | 2_4:+55314339 | None:intergenic |
| TGATCTTGAGCTCACAGAGA+AGG | 0.583852 | 2_4:-55314407 | Msa0336050:CDS |
| TGAGGGTTTGCAAGAATCGA+GGG | 0.588811 | 2_4:-55319162 | Msa0336050:CDS |
| CATTGGAATCACTGCTCCCA+AGG | 0.589022 | 2_4:-55319572 | Msa0336050:five_prime_UTR |
| TGGGTTCAGCTCTCTTCGTG+GGG | 0.593495 | 2_4:-55314882 | Msa0336050:intron |
| TAAGGATGAAGAAAGTGGAG+AGG | 0.597056 | 2_4:-55319360 | Msa0336050:CDS |
| ACGTCTTTAGGAGCGGGAGA+GGG | 0.598464 | 2_4:-55316844 | Msa0336050:intron |
| TTGAGGGTTTGCAAGAATCG+AGG | 0.601359 | 2_4:-55319163 | Msa0336050:CDS |
| CAGTAGCAGACGTAAAGGAA+AGG | 0.605981 | 2_4:-55313927 | Msa0336050:CDS |
| AGAGAACGAGGGCTTGTGTG+AGG | 0.609028 | 2_4:-55319126 | Msa0336050:CDS |
| GCTTAAATGTACCACCGGCA+AGG | 0.611381 | 2_4:+55314344 | None:intergenic |
| CTGAAGAAATCGTTCAGCAA+AGG | 0.611706 | 2_4:-55319595 | Msa0336050:five_prime_UTR |
| CGGGCTCATAGTGAAAGTGA+AGG | 0.622688 | 2_4:-55318894 | Msa0336050:CDS |
| GTGCTGGGTCTTCTTCGGCC+CGG | 0.623317 | 2_4:-55319415 | Msa0336050:CDS |
| GAGAACGAGGGCTTGTGTGA+GGG | 0.624656 | 2_4:-55319125 | Msa0336050:CDS |
| GTCAGGTAGTGATCCCAGGA+TGG | 0.629925 | 2_4:-55314098 | Msa0336050:CDS |
| AGCCCGAGAAGCTTCCATCA+CGG | 0.635675 | 2_4:+55314372 | None:intergenic |
| TCGATTATACATTTCACACA+TGG | 0.637286 | 2_4:+55315139 | None:intergenic |
| GGTAATCCTGTTGTTAGCGG+CGG | 0.637838 | 2_4:-55319104 | Msa0336050:CDS |
| TGAGGCATACAGCATATTTG+GGG | 0.641767 | 2_4:-55313993 | Msa0336050:CDS |
| CGGGCTGAATACCTTGCCGG+TGG | 0.647286 | 2_4:-55314355 | Msa0336050:CDS |
| TCACTTTCACTATGAGCCCG+GGG | 0.647451 | 2_4:+55318897 | None:intergenic |
| CCGGCCGGAGCACGTTACAC+AGG | 0.649179 | 2_4:-55319396 | Msa0336050:CDS |
| GGGCTCATAGTGAAAGTGAA+GGG | 0.654153 | 2_4:-55318893 | Msa0336050:CDS |
| GGGACGCCGTGGGTCAACAA+GGG | 0.656673 | 2_4:+55314922 | None:intergenic |
| ACACTTGGTCTGCAACAGCA+CGG | 0.659941 | 2_4:+55318150 | None:intergenic |
| TATTGAAATTAAGAAATTGG+GGG | 0.665766 | 2_4:+55319930 | None:intergenic |
| AGTGATCCCAGGATGGAAAG+CGG | 0.672936 | 2_4:-55314091 | Msa0336050:CDS |
| AGAGGTTAGGTTATGACACG+TGG | 0.676912 | 2_4:+55320065 | None:intergenic |
| GGAGGAGGAAGCTGAATCAA+CGG | 0.676953 | 2_4:-55319738 | Msa0336050:five_prime_UTR |
| AAGGCCAGTGATAGAGAACG+AGG | 0.680419 | 2_4:-55319138 | Msa0336050:CDS |
| TGTTGCAGACCAAGTGTACG+GGG | 0.685558 | 2_4:-55318144 | Msa0336050:CDS |
| AATGCAGGATCACCAAGGAG+AGG | 0.689700 | 2_4:-55318981 | Msa0336050:CDS |
| CTGTTAATGCAGGATCACCA+AGG | 0.695840 | 2_4:-55318986 | Msa0336050:CDS |
| ACGGTGGAAGGAAAAGAGAG+TGG | 0.703175 | 2_4:+55320032 | None:intergenic |
| GGAGGAAGCTGAATCAACGG+TGG | 0.733312 | 2_4:-55319735 | Msa0336050:five_prime_UTR |
| AGGCCAGTGATAGAGAACGA+GGG | 0.741926 | 2_4:-55319137 | Msa0336050:CDS |
| TGAAAACTTAGGCGTACTGG+TGG | 0.744384 | 2_4:+55314965 | None:intergenic |
| ATTCAAGAAGGAGTGCATCG+GGG | 0.750742 | 2_4:-55319019 | Msa0336050:CDS |
| CACCAAGGAGAGGATCTGCG+TGG | 0.755511 | 2_4:-55318971 | Msa0336050:CDS |
| ACTCGTATCTATGTTCAACG+TGG | 0.784709 | 2_4:-55319494 | Msa0336050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGAAATTAAGAAATT+GGG | + | chr2_4:55313800-55313819 | None:intergenic | 10.0% |
| !! | TTATATATTAGTTAATTAGA+AGG | - | chr2_4:55315404-55315423 | Msa0336050:intron | 10.0% |
| !! | TTACAAAAATGATATTATAT+AGG | - | chr2_4:55316676-55316695 | Msa0336050:intron | 10.0% |
| !! | AAACAAATTTCTAAATATTT+AGG | - | chr2_4:55317087-55317106 | Msa0336050:intron | 10.0% |
| !! | TTATTGAAATTAAGAAATTG+GGG | + | chr2_4:55313799-55313818 | None:intergenic | 15.0% |
| !! | GATTATTGAAATTAAGAAAT+TGG | + | chr2_4:55313801-55313820 | None:intergenic | 15.0% |
| !!! | TTTTTTTGATGAAGTTTTTT+TGG | - | chr2_4:55313940-55313959 | Msa0336050:CDS | 15.0% |
| !!! | TTTTTTGATGAAGTTTTTTT+GGG | - | chr2_4:55313941-55313960 | Msa0336050:CDS | 15.0% |
| !! | TTAATTACTTAATGATAACA+AGG | + | chr2_4:55314927-55314946 | None:intergenic | 15.0% |
| !! | GTTATCATTAAGTAATTAAT+TGG | - | chr2_4:55314928-55314947 | Msa0336050:CDS | 15.0% |
| !! | GATAATATCTTATATTGAAA+TGG | - | chr2_4:55315448-55315467 | Msa0336050:intron | 15.0% |
| !!! | ATTTAAGAAGATTTGATTTT+AGG | - | chr2_4:55315919-55315938 | Msa0336050:intron | 15.0% |
| !! | AACAAATTTCAAAATATTTG+TGG | + | chr2_4:55317279-55317298 | None:intergenic | 15.0% |
| !!! | TTTGATTTAAAATAGTTAGT+TGG | - | chr2_4:55317873-55317892 | Msa0336050:intron | 15.0% |
| !!! | ACTTTTTAACTTTTTTGAAT+AGG | - | chr2_4:55318508-55318527 | Msa0336050:intron | 15.0% |
| !! | TTAGTTCATTAAAAAAATCA+CGG | - | chr2_4:55319840-55319859 | Msa0336050:intron | 15.0% |
| !! | AAATCTATTATACATTGTAT+GGG | - | chr2_4:55320050-55320069 | Msa0336050:five_prime_UTR | 15.0% |
| !! | TATTGAAATTAAGAAATTGG+GGG | + | chr2_4:55313798-55313817 | None:intergenic | 20.0% |
| !! | TATATTGGCATGTTAATATT+GGG | - | chr2_4:55315329-55315348 | Msa0336050:intron | 20.0% |
| !!! | AGTTTGAAATTGATATTAGA+AGG | - | chr2_4:55315502-55315521 | Msa0336050:intron | 20.0% |
| !!! | GTTTGAAATTGATATTAGAA+GGG | - | chr2_4:55315503-55315522 | Msa0336050:intron | 20.0% |
| !! | ATTATATGGTATGTTAATGT+TGG | - | chr2_4:55315643-55315662 | Msa0336050:intron | 20.0% |
| !! | TTATATGGTATGTTAATGTT+GGG | - | chr2_4:55315644-55315663 | Msa0336050:intron | 20.0% |
| !! | CGTAATATATTGAACTTATT+AGG | - | chr2_4:55315713-55315732 | Msa0336050:intron | 20.0% |
| !!! | CATGAATTTTTTATTATAGC+TGG | - | chr2_4:55316022-55316041 | Msa0336050:intron | 20.0% |
| !!! | TTCTTTGATTTTGTAACAAA+AGG | + | chr2_4:55316060-55316079 | None:intergenic | 20.0% |
| !! | TACAAAATCAAAGAAATGTT+AGG | - | chr2_4:55316065-55316084 | Msa0336050:intron | 20.0% |
| !! | ACAAAATCAAAGAAATGTTA+GGG | - | chr2_4:55316066-55316085 | Msa0336050:intron | 20.0% |
| !!! | TTTTAAGATGTAAATAAGCA+AGG | - | chr2_4:55316133-55316152 | Msa0336050:intron | 20.0% |
| !! | TAAATTTACATTTATACCAC+AGG | + | chr2_4:55316593-55316612 | None:intergenic | 20.0% |
| !! | TGGTATAAATGTAAATTTAG+CGG | - | chr2_4:55316594-55316613 | Msa0336050:intron | 20.0% |
| !! | AATTCTATTAAAATATTGCC+TGG | - | chr2_4:55316824-55316843 | Msa0336050:CDS | 20.0% |
| !!! | TTTTCTCAATTTATAACAGA+AGG | - | chr2_4:55316909-55316928 | Msa0336050:intron | 20.0% |
| !! | TTTAAAAACAATACATGCTA+GGG | + | chr2_4:55317069-55317088 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACAATACATGCT+AGG | + | chr2_4:55317070-55317089 | None:intergenic | 20.0% |
| !! | AAATGGTGTAAACTAAATAT+GGG | + | chr2_4:55317256-55317275 | None:intergenic | 20.0% |
| !! | TTTCAAAATATTTGTGGAAA+TGG | + | chr2_4:55317273-55317292 | None:intergenic | 20.0% |
| !! | CATAAAAAGTTTACACAAAT+GGG | + | chr2_4:55317936-55317955 | None:intergenic | 20.0% |
| !! | ACATAAAAAGTTTACACAAA+TGG | + | chr2_4:55317937-55317956 | None:intergenic | 20.0% |
| !!! | GTAAACTTTTTATGTATACT+TGG | - | chr2_4:55317942-55317961 | Msa0336050:intron | 20.0% |
| !! | GTTTACATGTAATAAACTAA+AGG | + | chr2_4:55318318-55318337 | None:intergenic | 20.0% |
| !! | ATCATTAACAAGAAAATCAA+GGG | + | chr2_4:55318368-55318387 | None:intergenic | 20.0% |
| !! | AATCATTAACAAGAAAATCA+AGG | + | chr2_4:55318369-55318388 | None:intergenic | 20.0% |
| !!! | CTTTCTATTTTATTGTATGA+AGG | - | chr2_4:55318906-55318925 | Msa0336050:CDS | 20.0% |
| !! | AATTTCTGTTCAATGTAATA+TGG | + | chr2_4:55319058-55319077 | None:intergenic | 20.0% |
| !!! | TCTATTGATAGATTTAAGAT+GGG | + | chr2_4:55319514-55319533 | None:intergenic | 20.0% |
| !!! | TTGATGTATTTGTTGAAATT+TGG | - | chr2_4:55319560-55319579 | Msa0336050:five_prime_UTR | 20.0% |
| !!! | ATTATTTGCAACATTTTTCA+AGG | - | chr2_4:55320024-55320043 | Msa0336050:five_prime_UTR | 20.0% |
| !!! | TTATTTGCAACATTTTTCAA+GGG | - | chr2_4:55320025-55320044 | Msa0336050:five_prime_UTR | 20.0% |
| !! | CATACAATGTATAATAGATT+TGG | + | chr2_4:55320051-55320070 | None:intergenic | 20.0% |
| !! | CAAATCTATTATACATTGTA+TGG | - | chr2_4:55320049-55320068 | Msa0336050:five_prime_UTR | 20.0% |
| ! | GAAAACTGAGAAAAAGAAAT+GGG | + | chr2_4:55313743-55313762 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTAAAGTAGTTGA+AGG | - | chr2_4:55314051-55314070 | Msa0336050:CDS | 25.0% |
| !! | TTTAAAGTAGTTGAAGGATT+TGG | - | chr2_4:55314057-55314076 | Msa0336050:CDS | 25.0% |
| ! | TTAAAGTAGTTGAAGGATTT+GGG | - | chr2_4:55314058-55314077 | Msa0336050:CDS | 25.0% |
| ! | AATGAAGACTTTCCATTAAA+GGG | + | chr2_4:55314464-55314483 | None:intergenic | 25.0% |
| ! | AAATGAAGACTTTCCATTAA+AGG | + | chr2_4:55314465-55314484 | None:intergenic | 25.0% |
| !!! | GAATTTAAGTTAGTTGATGA+AGG | + | chr2_4:55314690-55314709 | None:intergenic | 25.0% |
| ! | CAACTAACTTAAATTCAAGA+AGG | - | chr2_4:55314694-55314713 | Msa0336050:intron | 25.0% |
| !!! | TTTTTTTTATATCCCCAGTT+AGG | - | chr2_4:55314980-55314999 | Msa0336050:CDS | 25.0% |
| ! | AAACTATCCTACAATTTAAC+TGG | - | chr2_4:55315185-55315204 | Msa0336050:intron | 25.0% |
| ! | AACTATCCTACAATTTAACT+GGG | - | chr2_4:55315186-55315205 | Msa0336050:intron | 25.0% |
| !!! | TTTTGAAAGAGTTGTTTGTT+AGG | - | chr2_4:55315301-55315320 | Msa0336050:intron | 25.0% |
| ! | CAATATTAACATGCCAATAT+AGG | + | chr2_4:55315330-55315349 | None:intergenic | 25.0% |
| ! | CTATATTGGCATGTTAATAT+TGG | - | chr2_4:55315328-55315347 | Msa0336050:intron | 25.0% |
| !! | TTAATTAGAAGGTTGATTCA+TGG | - | chr2_4:55315415-55315434 | Msa0336050:intron | 25.0% |
| ! | ATAAGATATTATCACAGTGA+AGG | + | chr2_4:55315441-55315460 | None:intergenic | 25.0% |
| ! | ATTGATATTAGAAGGGTAAA+AGG | - | chr2_4:55315510-55315529 | Msa0336050:intron | 25.0% |
| !! | ACTTACTTATTTGATTTCCA+CGG | - | chr2_4:55315758-55315777 | Msa0336050:intron | 25.0% |
| !!! | CATAATAAATACCGCTTTTT+GGG | + | chr2_4:55315800-55315819 | None:intergenic | 25.0% |
| !!! | TCATAATAAATACCGCTTTT+TGG | + | chr2_4:55315801-55315820 | None:intergenic | 25.0% |
| ! | AAAAGCGGTATTTATTATGA+AGG | - | chr2_4:55315801-55315820 | Msa0336050:intron | 25.0% |
| !!! | AATTTTTTATTATAGCTGGC+CGG | - | chr2_4:55316026-55316045 | Msa0336050:intron | 25.0% |
| ! | ATGTAAATAAGCAAGGAATA+AGG | - | chr2_4:55316140-55316159 | Msa0336050:intron | 25.0% |
| ! | TGTAAATAAGCAAGGAATAA+GGG | - | chr2_4:55316141-55316160 | Msa0336050:intron | 25.0% |
| ! | AATTACACTAAAACATGGAA+TGG | + | chr2_4:55316521-55316540 | None:intergenic | 25.0% |
| ! | GCTAAAATTACACTAAAACA+TGG | + | chr2_4:55316526-55316545 | None:intergenic | 25.0% |
| !!! | CATTTTTTCCTTCATATAGT+GGG | + | chr2_4:55316653-55316672 | None:intergenic | 25.0% |
| !!! | ACATTTTTTCCTTCATATAG+TGG | + | chr2_4:55316654-55316673 | None:intergenic | 25.0% |
| ! | GAAATGGTGTAAACTAAATA+TGG | + | chr2_4:55317257-55317276 | None:intergenic | 25.0% |
| !!! | GAAATTTGTTTTGTACTAAC+AGG | - | chr2_4:55317289-55317308 | Msa0336050:intron | 25.0% |
| ! | AATGCGGTTTAAACAAAAAA+GGG | + | chr2_4:55317411-55317430 | None:intergenic | 25.0% |
| ! | ATATCTTGACAAAAACAATG+CGG | + | chr2_4:55317427-55317446 | None:intergenic | 25.0% |
| !!! | GTTTTTTCCTATGAGAAATT+TGG | - | chr2_4:55317611-55317630 | Msa0336050:intron | 25.0% |
| ! | TAACTATAACTGTAACTTCA+CGG | + | chr2_4:55317983-55318002 | None:intergenic | 25.0% |
| ! | ATTACATGTAAACACATTAC+AGG | - | chr2_4:55318325-55318344 | Msa0336050:intron | 25.0% |
| !!! | GACAGTTTTCAAGTTATATA+GGG | + | chr2_4:55319034-55319053 | None:intergenic | 25.0% |
| !!! | AGACAGTTTTCAAGTTATAT+AGG | + | chr2_4:55319035-55319054 | None:intergenic | 25.0% |
| ! | TACATTGAACAGAAATTGAT+TGG | - | chr2_4:55319061-55319080 | Msa0336050:CDS | 25.0% |
| ! | GTTCTTTAAATTGAACTTGA+CGG | - | chr2_4:55319230-55319249 | Msa0336050:CDS | 25.0% |
| ! | ATATCTCTTCTCATACAATT+TGG | - | chr2_4:55319468-55319487 | Msa0336050:CDS | 25.0% |
| ! | GTCTATTGATAGATTTAAGA+TGG | + | chr2_4:55319515-55319534 | None:intergenic | 25.0% |
| ! | TATCAATAGACAGATTCATA+TGG | - | chr2_4:55319524-55319543 | Msa0336050:five_prime_UTR | 25.0% |
| !! | ATGTATTTGTTGAAATTTGG+TGG | - | chr2_4:55319563-55319582 | Msa0336050:five_prime_UTR | 25.0% |
| !!! | TTCTATGATTTGTTACTTGT+TGG | - | chr2_4:55319765-55319784 | Msa0336050:intron | 25.0% |
| ! | GGATATTCATTTATTCGATT+TGG | + | chr2_4:55319888-55319907 | None:intergenic | 25.0% |
| ! | AAACATACTAGAGTAAATAC+AGG | + | chr2_4:55319909-55319928 | None:intergenic | 25.0% |
| ! | ATCTCTCATATATCAAACTT+AGG | + | chr2_4:55320006-55320025 | None:intergenic | 25.0% |
| GGAAAACTGAGAAAAAGAAA+TGG | + | chr2_4:55313744-55313763 | None:intergenic | 30.0% | |
| !! | GAAAAATTAGGGTTTTGTGT+CGG | + | chr2_4:55313776-55313795 | None:intergenic | 30.0% |
| AGAAATTGGGGGAAAAATTA+GGG | + | chr2_4:55313787-55313806 | None:intergenic | 30.0% | |
| AAGAAATTGGGGGAAAAATT+AGG | + | chr2_4:55313788-55313807 | None:intergenic | 30.0% | |
| !!! | TCAATTTTTTCGATTCTCAC+AGG | - | chr2_4:55313826-55313845 | Msa0336050:three_prime_UTR | 30.0% |
| !!! | TTTGATGAAGTTTTTTTGGG+AGG | - | chr2_4:55313944-55313963 | Msa0336050:CDS | 30.0% |
| TAAATTCGACATCTCAAAGA+AGG | - | chr2_4:55314026-55314045 | Msa0336050:CDS | 30.0% | |
| ! | AATGGAAAGTCTTCATTTTG+AGG | - | chr2_4:55314467-55314486 | Msa0336050:intron | 30.0% |
| !! | TCCTTTAGGAAATGAAGTTT+TGG | - | chr2_4:55314506-55314525 | Msa0336050:intron | 30.0% |
| ACCAAAACTTCATTTCCTAA+AGG | + | chr2_4:55314510-55314529 | None:intergenic | 30.0% | |
| ACTTACTACATCATCATAAG+AGG | + | chr2_4:55314895-55314914 | None:intergenic | 30.0% | |
| ! | CGTGTAGGACATAATTTTTA+TGG | - | chr2_4:55315057-55315076 | Msa0336050:intron | 30.0% |
| CAAACAACTCTTTCAAAACT+AGG | + | chr2_4:55315299-55315318 | None:intergenic | 30.0% | |
| ! | GTTTGTTAGGTTTCCTATAT+TGG | - | chr2_4:55315314-55315333 | Msa0336050:intron | 30.0% |
| TGAAGTAAAAAGAATGTCAG+AGG | - | chr2_4:55315536-55315555 | Msa0336050:intron | 30.0% | |
| TAAAAAGAATGTCAGAGGAT+GGG | - | chr2_4:55315541-55315560 | Msa0336050:intron | 30.0% | |
| ! | TATCCATATTTCTGCTCTAT+TGG | - | chr2_4:55315688-55315707 | Msa0336050:intron | 30.0% |
| ! | CTTACTTATTTGATTTCCAC+GGG | - | chr2_4:55315759-55315778 | Msa0336050:intron | 30.0% |
| TATTTATTATGAAGGTCCCT+GGG | - | chr2_4:55315809-55315828 | Msa0336050:intron | 30.0% | |
| AGGTTAGCAATTCATATTGA+AGG | - | chr2_4:55315939-55315958 | Msa0336050:intron | 30.0% | |
| ! | GAAGGTTTTTAAATGCATCT+AGG | - | chr2_4:55315957-55315976 | Msa0336050:intron | 30.0% |
| ATAAAACCTAAGCCAACAAA+TGG | - | chr2_4:55316266-55316285 | Msa0336050:intron | 30.0% | |
| ATTTCCTTCATTCCATTTGT+TGG | + | chr2_4:55316281-55316300 | None:intergenic | 30.0% | |
| GAATGAGCAAATATAATGTC+TGG | + | chr2_4:55316332-55316351 | None:intergenic | 30.0% | |
| GACATTATATTTGCTCATTC+TGG | - | chr2_4:55316332-55316351 | Msa0336050:intron | 30.0% | |
| GATGTAACACAATACATCAA+GGG | + | chr2_4:55316365-55316384 | None:intergenic | 30.0% | |
| TGATGTAACACAATACATCA+AGG | + | chr2_4:55316366-55316385 | None:intergenic | 30.0% | |
| !! | TTTTCTCATTTTTGTTCAGC+TGG | - | chr2_4:55316388-55316407 | Msa0336050:intron | 30.0% |
| TTCTACAAAAATATTGCCTG+TGG | - | chr2_4:55316452-55316471 | Msa0336050:intron | 30.0% | |
| AATTAGAATCCTACCATGAT+GGG | + | chr2_4:55316498-55316517 | None:intergenic | 30.0% | |
| !! | TTTTCTCACTTTTGCTTAGA+TGG | - | chr2_4:55316761-55316780 | Msa0336050:intron | 30.0% |
| ! | TAGATGGCATATTTTTCTTC+TGG | - | chr2_4:55316777-55316796 | Msa0336050:intron | 30.0% |
| ! | ACAAAATTAGTTTGATCACC+AGG | + | chr2_4:55316845-55316864 | None:intergenic | 30.0% |
| GGTATGTCAGAACATAATTT+AGG | - | chr2_4:55316968-55316987 | Msa0336050:intron | 30.0% | |
| ACATAATTTAGGCTTCTATG+TGG | - | chr2_4:55316979-55316998 | Msa0336050:intron | 30.0% | |
| ! | AATACATGCTAGGGAAATTT+TGG | + | chr2_4:55317060-55317079 | None:intergenic | 30.0% |
| TACAGCTTTCAAAACATTTG+TGG | + | chr2_4:55317122-55317141 | None:intergenic | 30.0% | |
| ! | AAGCTGTACTTTTGTACTTA+TGG | - | chr2_4:55317134-55317153 | Msa0336050:intron | 30.0% |
| ! | GAATGTGAATTTTCAACTAC+CGG | + | chr2_4:55317329-55317348 | None:intergenic | 30.0% |
| ATGCAAAATAATCCAGATGT+GGG | - | chr2_4:55317362-55317381 | Msa0336050:intron | 30.0% | |
| CAATGCGGTTTAAACAAAAA+AGG | + | chr2_4:55317412-55317431 | None:intergenic | 30.0% | |
| GAAAATAACTGAATGAAGAG+CGG | + | chr2_4:55317494-55317513 | None:intergenic | 30.0% | |
| ATAATCGCCAAATTTCTCAT+AGG | + | chr2_4:55317621-55317640 | None:intergenic | 30.0% | |
| TAATTCTCTTTATCACGACA+AGG | + | chr2_4:55317648-55317667 | None:intergenic | 30.0% | |
| GATCGAATAGTCAATAGAAT+TGG | - | chr2_4:55317684-55317703 | Msa0336050:intron | 30.0% | |
| ! | GGGTCTTTGGTATTTAATTT+AGG | - | chr2_4:55317720-55317739 | Msa0336050:intron | 30.0% |
| ! | TTCCTTTAAAGAAGTGTGTT+TGG | - | chr2_4:55317790-55317809 | Msa0336050:intron | 30.0% |
| ATCTCTTTATCGTATGTGAT+GGG | + | chr2_4:55318107-55318126 | None:intergenic | 30.0% | |
| ! | AAACACATTACAGGATTTTC+TGG | - | chr2_4:55318334-55318353 | Msa0336050:intron | 30.0% |
| !! | TTACCTTTCCCTCTAAAATA+AGG | - | chr2_4:55318402-55318421 | Msa0336050:intron | 30.0% |
| !! | TACCTTTCCCTCTAAAATAA+GGG | - | chr2_4:55318403-55318422 | Msa0336050:intron | 30.0% |
| !!! | AAGTGATCCCTTATTTTAGA+GGG | + | chr2_4:55318413-55318432 | None:intergenic | 30.0% |
| !!! | AAAGTGATCCCTTATTTTAG+AGG | + | chr2_4:55318414-55318433 | None:intergenic | 30.0% |
| GTAAATATGTTAACCCTTTC+TGG | - | chr2_4:55318532-55318551 | Msa0336050:intron | 30.0% | |
| TCGATTATACATTTCACACA+TGG | + | chr2_4:55318589-55318608 | None:intergenic | 30.0% | |
| ! | GAGTAGGAGTATATATGAAT+AGG | + | chr2_4:55318612-55318631 | None:intergenic | 30.0% |
| ! | CTTCCATGAAATGTATTGAT+AGG | + | chr2_4:55318724-55318743 | None:intergenic | 30.0% |
| ! | CAAATTTGTGTTTTGTCAGT+TGG | + | chr2_4:55318958-55318977 | None:intergenic | 30.0% |
| AACAGAAATTGATTGGAAGA+TGG | - | chr2_4:55319068-55319087 | Msa0336050:CDS | 30.0% | |
| !! | TACTTGCATTATCGATTTGT+TGG | + | chr2_4:55319173-55319192 | None:intergenic | 30.0% |
| AATAGACAGATTCATATGGT+CGG | - | chr2_4:55319528-55319547 | Msa0336050:five_prime_UTR | 30.0% | |
| ATGAATATGTTACTGTCGAT+GGG | - | chr2_4:55319688-55319707 | Msa0336050:intron | 30.0% | |
| ! | ATTTGTTACTTGTTGGAAAC+TGG | - | chr2_4:55319772-55319791 | Msa0336050:intron | 30.0% |
| ! | ATAGAGTTTTTAACGGTGGA+AGG | + | chr2_4:55313708-55313727 | None:intergenic | 35.0% |
| ! | GAAGGCGATAGAGTTTTTAA+CGG | + | chr2_4:55313715-55313734 | None:intergenic | 35.0% |
| AAAAAGAAATGGGAAGGAGA+AGG | + | chr2_4:55313733-55313752 | None:intergenic | 35.0% | |
| ACTGAGAAAAAGAAATGGGA+AGG | + | chr2_4:55313739-55313758 | None:intergenic | 35.0% | |
| CGAATCGTGAAGATTTAACA+GGG | + | chr2_4:55313876-55313895 | None:intergenic | 35.0% | |
| TCGAATCGTGAAGATTTAAC+AGG | + | chr2_4:55313877-55313896 | None:intergenic | 35.0% | |
| TGGGTCTGATGAGAATTATT+AGG | - | chr2_4:55314077-55314096 | Msa0336050:CDS | 35.0% | |
| GGGTCTGATGAGAATTATTA+GGG | - | chr2_4:55314078-55314097 | Msa0336050:CDS | 35.0% | |
| GGTCTGATGAGAATTATTAG+GGG | - | chr2_4:55314079-55314098 | Msa0336050:CDS | 35.0% | |
| ! | CGATAAGCTCTTTTGGATTA+GGG | - | chr2_4:55314186-55314205 | Msa0336050:intron | 35.0% |
| !! | CTCTTTTGGATTAGGGTTTT+GGG | - | chr2_4:55314193-55314212 | Msa0336050:intron | 35.0% |
| AAAGAGTGATGACCCTTTAA+TGG | - | chr2_4:55314449-55314468 | Msa0336050:intron | 35.0% | |
| AATGATACGCATACTCCTTT+AGG | - | chr2_4:55314492-55314511 | Msa0336050:intron | 35.0% | |
| !!! | AAGTTTTGGTTGATCTTCCT+GGG | - | chr2_4:55314520-55314539 | Msa0336050:intron | 35.0% |
| TCTTCTTTAACATCTTTCCC+AGG | + | chr2_4:55314540-55314559 | None:intergenic | 35.0% | |
| TGGGAAAGATGTTAAAGAAG+AGG | - | chr2_4:55314539-55314558 | Msa0336050:intron | 35.0% | |
| AGATGTTAAAGAAGAGGTTG+AGG | - | chr2_4:55314545-55314564 | Msa0336050:intron | 35.0% | |
| GATGTTAAAGAAGAGGTTGA+GGG | - | chr2_4:55314546-55314565 | Msa0336050:intron | 35.0% | |
| !! | AAGTTAGTTGATGAAGGCTT+TGG | + | chr2_4:55314684-55314703 | None:intergenic | 35.0% |
| ! | AAATTCAAGAAGGAGTGCAT+CGG | - | chr2_4:55314704-55314723 | Msa0336050:intron | 35.0% |
| TATTCTGCCAAAAGACTTGT+AGG | - | chr2_4:55315082-55315101 | Msa0336050:intron | 35.0% | |
| TAGGAATGAGGTGGATAATT+TGG | - | chr2_4:55315101-55315120 | Msa0336050:intron | 35.0% | |
| ! | CTCTTATAGCATTGAAGAGA+AGG | + | chr2_4:55315128-55315147 | None:intergenic | 35.0% |
| AAGTAGCCCAGTTAAATTGT+AGG | + | chr2_4:55315195-55315214 | None:intergenic | 35.0% | |
| GTAAAAAGAATGTCAGAGGA+TGG | - | chr2_4:55315540-55315559 | Msa0336050:intron | 35.0% | |
| AGCAGAAATATGGATACTGA+AGG | + | chr2_4:55315684-55315703 | None:intergenic | 35.0% | |
| GATCCAATAGAGCAGAAATA+TGG | + | chr2_4:55315694-55315713 | None:intergenic | 35.0% | |
| GTATTTATTATGAAGGTCCC+TGG | - | chr2_4:55315808-55315827 | Msa0336050:intron | 35.0% | |
| TAGTGACATACTGCAGAATT+AGG | - | chr2_4:55315852-55315871 | Msa0336050:intron | 35.0% | |
| !!! | CCTAGTTTTAAAACCACCTA+TGG | + | chr2_4:55315899-55315918 | None:intergenic | 35.0% |
| !!! | CCATAGGTGGTTTTAAAACT+AGG | - | chr2_4:55315896-55315915 | Msa0336050:intron | 35.0% |
| GTAACAAAAGGTCATAAGTC+CGG | + | chr2_4:55316048-55316067 | None:intergenic | 35.0% | |
| TGAGAATGAGTTAGTGAGAA+TGG | - | chr2_4:55316099-55316118 | Msa0336050:intron | 35.0% | |
| GAGAATGAGTTAGTGAGAAT+GGG | - | chr2_4:55316100-55316119 | Msa0336050:intron | 35.0% | |
| AATTGAAACATGAACAGCGT+TGG | - | chr2_4:55316187-55316206 | Msa0336050:intron | 35.0% | |
| ACTCTCAGAAGTTAAAGTTC+AGG | + | chr2_4:55316225-55316244 | None:intergenic | 35.0% | |
| !! | TTCATTCCATTTGTTGGCTT+AGG | + | chr2_4:55316275-55316294 | None:intergenic | 35.0% |
| TAAGCCAACAAATGGAATGA+AGG | - | chr2_4:55316274-55316293 | Msa0336050:intron | 35.0% | |
| GAATTAGAATCCTACCATGA+TGG | + | chr2_4:55316499-55316518 | None:intergenic | 35.0% | |
| ! | CTCATTAGATTTGCTCATTC+TGG | - | chr2_4:55316560-55316579 | Msa0336050:intron | 35.0% |
| ACTCATTAGATTGCTCATTC+TGG | - | chr2_4:55316702-55316721 | Msa0336050:intron | 35.0% | |
| CATTCTGATTTCACGTCTTT+AGG | - | chr2_4:55316869-55316888 | Msa0336050:intron | 35.0% | |
| ! | GTTTTACCTCATACTGTAAG+AGG | - | chr2_4:55316931-55316950 | Msa0336050:intron | 35.0% |
| TAAGAGGAAGAGAAGAGATA+AGG | - | chr2_4:55316947-55316966 | Msa0336050:intron | 35.0% | |
| CTTTAGTGTGCCAATTAATC+CGG | - | chr2_4:55317200-55317219 | Msa0336050:intron | 35.0% | |
| GTGTAAACTAAATATGGGCT+GGG | + | chr2_4:55317251-55317270 | None:intergenic | 35.0% | |
| CATGCAAAATAATCCAGATG+TGG | - | chr2_4:55317361-55317380 | Msa0336050:intron | 35.0% | |
| CATCTTAGAAGAGTAAAGCA+TGG | + | chr2_4:55317540-55317559 | None:intergenic | 35.0% | |
| CGAATAGTCAATAGAATTGG+CGG | - | chr2_4:55317687-55317706 | Msa0336050:intron | 35.0% | |
| GAATAGTCAATAGAATTGGC+GGG | - | chr2_4:55317688-55317707 | Msa0336050:intron | 35.0% | |
| AATAGTCAATAGAATTGGCG+GGG | - | chr2_4:55317689-55317708 | Msa0336050:intron | 35.0% | |
| ! | ATTTAATTTAGGTGCAGCAG+TGG | - | chr2_4:55317731-55317750 | Msa0336050:intron | 35.0% |
| ! | ATTTTACTCCCTTATAGCTG+TGG | - | chr2_4:55317760-55317779 | Msa0336050:intron | 35.0% |
| AGCCAAACACACTTCTTTAA+AGG | + | chr2_4:55317795-55317814 | None:intergenic | 35.0% | |
| CATCTCTTTATCGTATGTGA+TGG | + | chr2_4:55318108-55318127 | None:intergenic | 35.0% | |
| TCGTGTATCTCAAATCTCAA+TGG | - | chr2_4:55318157-55318176 | Msa0336050:CDS | 35.0% | |
| CAAATCTCAATGGACATGTT+AGG | - | chr2_4:55318167-55318186 | Msa0336050:CDS | 35.0% | |
| TTGACACATTCAAAACCAAG+TGG | + | chr2_4:55318198-55318217 | None:intergenic | 35.0% | |
| !!! | ATCCCTTATTTTAGAGGGAA+AGG | + | chr2_4:55318408-55318427 | None:intergenic | 35.0% |
| CAACAAACTAAAACTGCATG+TGG | + | chr2_4:55318469-55318488 | None:intergenic | 35.0% | |
| !!! | CACATGCAGTTTTAGTTTGT+TGG | - | chr2_4:55318467-55318486 | Msa0336050:intron | 35.0% |
| !! | TGTTGGCATATGTTGATAGT+TGG | - | chr2_4:55318484-55318503 | Msa0336050:intron | 35.0% |
| TATACATTTCACACATGGCT+TGG | + | chr2_4:55318584-55318603 | None:intergenic | 35.0% | |
| GAGCCTATCAATACATTTCA+TGG | - | chr2_4:55318718-55318737 | Msa0336050:intron | 35.0% | |
| GGTTACCATGATGAAAACTT+AGG | + | chr2_4:55318774-55318793 | None:intergenic | 35.0% | |
| TTATAGAAGCCCCAAAAGAA+AGG | - | chr2_4:55319007-55319026 | Msa0336050:CDS | 35.0% | |
| TATAGAAGCCCCAAAAGAAA+GGG | - | chr2_4:55319008-55319027 | Msa0336050:CDS | 35.0% | |
| ! | TATATAGGGCCCTTTCTTTT+GGG | + | chr2_4:55319020-55319039 | None:intergenic | 35.0% |
| ! | TTATATAGGGCCCTTTCTTT+TGG | + | chr2_4:55319021-55319040 | None:intergenic | 35.0% |
| ATTGATTGGAAGATGGTTGA+CGG | - | chr2_4:55319075-55319094 | Msa0336050:CDS | 35.0% | |
| TGTTGACAAAGATCAAGTCA+AGG | - | chr2_4:55319125-55319144 | Msa0336050:CDS | 35.0% | |
| ! | TTGTTGCTTAAATGTACCAC+CGG | + | chr2_4:55319389-55319408 | None:intergenic | 35.0% |
| GGTACATTTAAGCAACAACT+TGG | - | chr2_4:55319391-55319410 | Msa0336050:CDS | 35.0% | |
| CATGAATATGTTACTGTCGA+TGG | - | chr2_4:55319687-55319706 | Msa0336050:intron | 35.0% | |
| ATTGAGGCATACAGCATATT+TGG | - | chr2_4:55319730-55319749 | Msa0336050:five_prime_UTR | 35.0% | |
| TTGAGGCATACAGCATATTT+GGG | - | chr2_4:55319731-55319750 | Msa0336050:five_prime_UTR | 35.0% | |
| !!! | GATGAAGTTTTTTTGGGAGG+TGG | - | chr2_4:55313947-55313966 | Msa0336050:CDS | 40.0% |
| TCAACGGTGGTGAAAAATCT+CGG | - | chr2_4:55314003-55314022 | Msa0336050:CDS | 40.0% | |
| CTGAAGAAATCGTTCAGCAA+AGG | - | chr2_4:55314130-55314149 | Msa0336050:intron | 40.0% | |
| ! | AAATCGTTCAGCAAAGGCAT+TGG | - | chr2_4:55314136-55314155 | Msa0336050:intron | 40.0% |
| ! | GCGATAAGCTCTTTTGGATT+AGG | - | chr2_4:55314185-55314204 | Msa0336050:intron | 40.0% |
| !! | GCTCTTTTGGATTAGGGTTT+TGG | - | chr2_4:55314192-55314211 | Msa0336050:intron | 40.0% |
| ACTCGTATCTATGTTCAACG+TGG | - | chr2_4:55314231-55314250 | Msa0336050:intron | 40.0% | |
| GTTGCTAAGGATGAAGAAAG+TGG | - | chr2_4:55314360-55314379 | Msa0336050:CDS | 40.0% | |
| TAAGGATGAAGAAAGTGGAG+AGG | - | chr2_4:55314365-55314384 | Msa0336050:CDS | 40.0% | |
| ATGATGTTGTGGAGTATGCT+GGG | - | chr2_4:55314412-55314431 | Msa0336050:CDS | 40.0% | |
| AGTATGCTGGGAGTAGTAAT+AGG | - | chr2_4:55314424-55314443 | Msa0336050:CDS | 40.0% | |
| GTATGCTGGGAGTAGTAATA+GGG | - | chr2_4:55314425-55314444 | Msa0336050:CDS | 40.0% | |
| !!! | GAAGTTTTGGTTGATCTTCC+TGG | - | chr2_4:55314519-55314538 | Msa0336050:intron | 40.0% |
| !! | TTAGTTGATGAAGGCTTTGG+AGG | + | chr2_4:55314681-55314700 | None:intergenic | 40.0% |
| ! | AATTCAAGAAGGAGTGCATC+GGG | - | chr2_4:55314705-55314724 | Msa0336050:intron | 40.0% |
| TCTCCTAATGCTGTTAATGC+AGG | - | chr2_4:55314729-55314748 | Msa0336050:intron | 40.0% | |
| GATCCTGCATTAACAGCATT+AGG | + | chr2_4:55314735-55314754 | None:intergenic | 40.0% | |
| TCATAAGAGGACACATAGCA+TGG | + | chr2_4:55314882-55314901 | None:intergenic | 40.0% | |
| ! | CCTCATTCCTACAAGTCTTT+TGG | + | chr2_4:55315092-55315111 | None:intergenic | 40.0% |
| CCAAAAGACTTGTAGGAATG+AGG | - | chr2_4:55315089-55315108 | Msa0336050:intron | 40.0% | |
| AAAGACTTGTAGGAATGAGG+TGG | - | chr2_4:55315092-55315111 | Msa0336050:intron | 40.0% | |
| ATGGTATTTGCATCCATGTC+AGG | - | chr2_4:55315467-55315486 | Msa0336050:intron | 40.0% | |
| GGACTCGGAATTGTATGATT+TGG | - | chr2_4:55315602-55315621 | Msa0336050:intron | 40.0% | |
| !! | CGGAATTGTATGATTTGGTC+AGG | - | chr2_4:55315607-55315626 | Msa0336050:intron | 40.0% |
| GCAGATGAGCGTAGATTATA+TGG | - | chr2_4:55315629-55315648 | Msa0336050:intron | 40.0% | |
| TTGATTTCCACGGGTTTGAA+CGG | - | chr2_4:55315768-55315787 | Msa0336050:intron | 40.0% | |
| ATTCACAACCACAAAACCCA+GGG | + | chr2_4:55315828-55315847 | None:intergenic | 40.0% | |
| GTTATCATAAGCTAGACCAG+AGG | + | chr2_4:55316423-55316442 | None:intergenic | 40.0% | |
| TAGTTTGATTCACAGTCCAC+AGG | + | chr2_4:55316471-55316490 | None:intergenic | 40.0% | |
| ATCAAACTAACCTCCCATCA+TGG | - | chr2_4:55316482-55316501 | Msa0336050:intron | 40.0% | |
| GTAGTAGTGCAATAAACCAC+AGG | + | chr2_4:55316735-55316754 | None:intergenic | 40.0% | |
| ! | TGATTTCACGTCTTTAGGAG+CGG | - | chr2_4:55316874-55316893 | Msa0336050:intron | 40.0% |
| TCTCTTCCTCTTACAGTATG+AGG | + | chr2_4:55316940-55316959 | None:intergenic | 40.0% | |
| GGTGTAAACTAAATATGGGC+TGG | + | chr2_4:55317252-55317271 | None:intergenic | 40.0% | |
| ACAGGAGTGATTTATGCAAC+CGG | - | chr2_4:55317307-55317326 | Msa0336050:intron | 40.0% | |
| GGTTTAAACAAAAAAGGGCC+GGG | + | chr2_4:55317406-55317425 | None:intergenic | 40.0% | |
| CGGTTTAAACAAAAAAGGGC+CGG | + | chr2_4:55317407-55317426 | None:intergenic | 40.0% | |
| AACTTGTGCCACAGCTATAA+GGG | + | chr2_4:55317771-55317790 | None:intergenic | 40.0% | |
| AAACTTGTGCCACAGCTATA+AGG | + | chr2_4:55317772-55317791 | None:intergenic | 40.0% | |
| !!! | AGTTGGTAACTCGAGTCTTT+TGG | - | chr2_4:55317890-55317909 | Msa0336050:intron | 40.0% |
| ACATGTTAGGAACTTCCACT+TGG | - | chr2_4:55318180-55318199 | Msa0336050:CDS | 40.0% | |
| AGAGAGATCTCGACAACTAA+TGG | - | chr2_4:55318273-55318292 | Msa0336050:intron | 40.0% | |
| ! | ATATGTTAACCCTTTCTGGC+AGG | - | chr2_4:55318536-55318555 | Msa0336050:intron | 40.0% |
| CATATATACTCCTACTCCAC+AGG | - | chr2_4:55318615-55318634 | Msa0336050:intron | 40.0% | |
| TGTAAGATAAGCTCTACCTG+TGG | + | chr2_4:55318634-55318653 | None:intergenic | 40.0% | |
| TGATGAAAACTTAGGCGTAC+TGG | + | chr2_4:55318766-55318785 | None:intergenic | 40.0% | |
| ! | GTACGCCTAAGTTTTCATCA+TGG | - | chr2_4:55318766-55318785 | Msa0336050:intron | 40.0% |
| ! | ATATAGGGCCCTTTCTTTTG+GGG | + | chr2_4:55319019-55319038 | None:intergenic | 40.0% |
| TAAATTGAACTTGACGGCTG+AGG | - | chr2_4:55319236-55319255 | Msa0336050:CDS | 40.0% | |
| ! | TTTTACAACTCCCTTCTGAC+AGG | - | chr2_4:55319267-55319286 | Msa0336050:CDS | 40.0% |
| !! | GAGATATTAACTTGCTCCAG+AGG | + | chr2_4:55319455-55319474 | None:intergenic | 40.0% |
| ! | AGATTCATATGGTCGGTTCT+TGG | - | chr2_4:55319535-55319554 | Msa0336050:five_prime_UTR | 40.0% |
| !! | TGGTGGACTATAAGCTAACT+TGG | - | chr2_4:55319580-55319599 | Msa0336050:five_prime_UTR | 40.0% |
| GGTGTATTAATGTGAGTTGC+AGG | - | chr2_4:55319601-55319620 | Msa0336050:five_prime_UTR | 40.0% | |
| TAGTTACCTACAAGCGATTG+AGG | - | chr2_4:55319714-55319733 | Msa0336050:intron | 40.0% | |
| TGAGGCATACAGCATATTTG+GGG | - | chr2_4:55319732-55319751 | Msa0336050:five_prime_UTR | 40.0% | |
| AGAGGTTAGGTTATGACACG+TGG | + | chr2_4:55313663-55313682 | None:intergenic | 45.0% | |
| ! | GGCGATAGAGTTTTTAACGG+TGG | + | chr2_4:55313712-55313731 | None:intergenic | 45.0% |
| ! | GTTTTGTGTCGGAGAAAGAG+GGG | + | chr2_4:55313765-55313784 | None:intergenic | 45.0% |
| !! | GGTTTTGTGTCGGAGAAAGA+GGG | + | chr2_4:55313766-55313785 | None:intergenic | 45.0% |
| TTCGTAACAAGAATCGCACG+CGG | + | chr2_4:55313905-55313924 | None:intergenic | 45.0% | |
| !!! | TTTTTTTGGGAGGTGGTTGC+AGG | - | chr2_4:55313954-55313973 | Msa0336050:CDS | 45.0% |
| TTATCGCGTGTTCTTGCCTT+GGG | + | chr2_4:55314172-55314191 | None:intergenic | 45.0% | |
| ! | GAACACGCGATAAGCTCTTT+TGG | - | chr2_4:55314179-55314198 | Msa0336050:intron | 45.0% |
| AAGAAGACCCAGCACGATTA+GGG | + | chr2_4:55314305-55314324 | None:intergenic | 45.0% | |
| TAATCGTGCTGGGTCTTCTT+CGG | - | chr2_4:55314305-55314324 | Msa0336050:CDS | 45.0% | |
| ACAGGTGCAATCTGTTGCTA+AGG | - | chr2_4:55314347-55314366 | Msa0336050:CDS | 45.0% | |
| !! | GGTTGTTGGTGATGATGTTG+TGG | - | chr2_4:55314401-55314420 | Msa0336050:CDS | 45.0% |
| GATGATGTTGTGGAGTATGC+TGG | - | chr2_4:55314411-55314430 | Msa0336050:CDS | 45.0% | |
| TTGAGGGTTTGCAAGAATCG+AGG | - | chr2_4:55314562-55314581 | Msa0336050:intron | 45.0% | |
| TGAGGGTTTGCAAGAATCGA+GGG | - | chr2_4:55314563-55314582 | Msa0336050:intron | 45.0% | |
| GTTTGCAAGAATCGAGGGAA+AGG | - | chr2_4:55314568-55314587 | Msa0336050:intron | 45.0% | |
| GAGGGTAATCCTGTTGTTAG+CGG | - | chr2_4:55314618-55314637 | Msa0336050:intron | 45.0% | |
| ! | ATTCAAGAAGGAGTGCATCG+GGG | - | chr2_4:55314706-55314725 | Msa0336050:intron | 45.0% |
| CTGTTAATGCAGGATCACCA+AGG | - | chr2_4:55314739-55314758 | Msa0336050:intron | 45.0% | |
| TTCACTTTCACTATGAGCCC+GGG | + | chr2_4:55314832-55314851 | None:intergenic | 45.0% | |
| CTTCACTTTCACTATGAGCC+CGG | + | chr2_4:55314833-55314852 | None:intergenic | 45.0% | |
| GGGCTCATAGTGAAAGTGAA+GGG | - | chr2_4:55314832-55314851 | Msa0336050:intron | 45.0% | |
| TTTATATCCCCAGTTAGGCG+AGG | - | chr2_4:55314985-55315004 | Msa0336050:CDS | 45.0% | |
| TTATATCCCCAGTTAGGCGA+GGG | - | chr2_4:55314986-55315005 | Msa0336050:CDS | 45.0% | |
| CGTATCGTGAACAAGGTCAT+TGG | + | chr2_4:55315039-55315058 | None:intergenic | 45.0% | |
| ACCTTGTTCACGATACGTGT+AGG | - | chr2_4:55315042-55315061 | Msa0336050:intron | 45.0% | |
| TCCTACACGTATCGTGAACA+AGG | + | chr2_4:55315046-55315065 | None:intergenic | 45.0% | |
| TAAACTCGCTTGCATCATCG+CGG | - | chr2_4:55315273-55315292 | Msa0336050:intron | 45.0% | |
| AACGGTCTTCTCCCAAAAAG+CGG | - | chr2_4:55315786-55315805 | Msa0336050:intron | 45.0% | |
| GATTCACAACCACAAAACCC+AGG | + | chr2_4:55315829-55315848 | None:intergenic | 45.0% | |
| TAAAACCACCTATGGCAGAC+TGG | + | chr2_4:55315891-55315910 | None:intergenic | 45.0% | |
| TTCACTAAGTCTATGCACGC+CGG | - | chr2_4:55315981-55316000 | Msa0336050:intron | 45.0% | |
| ! | CATGAACAGCGTTGGAGATA+AGG | - | chr2_4:55316195-55316214 | Msa0336050:intron | 45.0% |
| AGCTAGACCAGAGGAGAAAT+GGG | + | chr2_4:55316414-55316433 | None:intergenic | 45.0% | |
| AAGCTAGACCAGAGGAGAAA+TGG | + | chr2_4:55316415-55316434 | None:intergenic | 45.0% | |
| AACTAACCTCCCATCATGGT+AGG | - | chr2_4:55316486-55316505 | Msa0336050:intron | 45.0% | |
| ! | TAGAATCCTACCATGATGGG+AGG | + | chr2_4:55316495-55316514 | None:intergenic | 45.0% |
| GCGGTATAAATGCAACCTCA+TGG | - | chr2_4:55316613-55316632 | Msa0336050:intron | 45.0% | |
| CTTGCTCACCCACTATATGA+AGG | - | chr2_4:55316642-55316661 | Msa0336050:intron | 45.0% | |
| ! | TCATTCTGGTTACACTCCTG+TGG | - | chr2_4:55316716-55316735 | Msa0336050:intron | 45.0% |
| ! | GATTTCACGTCTTTAGGAGC+GGG | - | chr2_4:55316875-55316894 | Msa0336050:intron | 45.0% |
| GAACAATCACAACCCACATC+TGG | + | chr2_4:55317377-55317396 | None:intergenic | 45.0% | |
| TTGTGATTGTTCCCTTCTCC+CGG | - | chr2_4:55317385-55317404 | Msa0336050:intron | 45.0% | |
| ACTGAATGAAGAGCGGAAAG+TGG | + | chr2_4:55317487-55317506 | None:intergenic | 45.0% | |
| CATGGCACAATGTAACTAGC+AGG | + | chr2_4:55317522-55317541 | None:intergenic | 45.0% | |
| AGAATTGGCGGGGATATACT+TGG | - | chr2_4:55317699-55317718 | Msa0336050:intron | 45.0% | |
| GAATTGGCGGGGATATACTT+GGG | - | chr2_4:55317700-55317719 | Msa0336050:intron | 45.0% | |
| ! | AACCCTTTCTGGCAGGTTTA+TGG | - | chr2_4:55318543-55318562 | Msa0336050:intron | 45.0% |
| ! | ACCCTTTCTGGCAGGTTTAT+GGG | - | chr2_4:55318544-55318563 | Msa0336050:intron | 45.0% |
| TCCCATAAACCTGCCAGAAA+GGG | + | chr2_4:55318548-55318567 | None:intergenic | 45.0% | |
| TTCCCATAAACCTGCCAGAA+AGG | + | chr2_4:55318549-55318568 | None:intergenic | 45.0% | |
| ATAAGCTCTACCTGTGGAGT+AGG | + | chr2_4:55318628-55318647 | None:intergenic | 45.0% | |
| TGAAAACTTAGGCGTACTGG+TGG | + | chr2_4:55318763-55318782 | None:intergenic | 45.0% | |
| GGTCAACAAGGGAGTTGTAA+TGG | + | chr2_4:55318795-55318814 | None:intergenic | 45.0% | |
| !! | GCTAAAAGTGCCTGTCAGAA+GGG | + | chr2_4:55319280-55319299 | None:intergenic | 45.0% |
| !! | AGCTAAAAGTGCCTGTCAGA+AGG | + | chr2_4:55319281-55319300 | None:intergenic | 45.0% |
| !! | TGACAGGCACTTTTAGCTGA+GGG | - | chr2_4:55319283-55319302 | Msa0336050:CDS | 45.0% |
| TGATCTTGAGCTCACAGAGA+AGG | - | chr2_4:55319318-55319337 | Msa0336050:CDS | 45.0% | |
| GGAAATTGAACTTGCCGTGA+TGG | - | chr2_4:55319339-55319358 | Msa0336050:CDS | 45.0% | |
| !! | TAACTTGCTCCAGAGGAAGA+TGG | + | chr2_4:55319448-55319467 | None:intergenic | 45.0% |
| TGTATGCCTCAATCGCTTGT+AGG | + | chr2_4:55319723-55319742 | None:intergenic | 45.0% | |
| CAGTAGCAGACGTAAAGGAA+AGG | - | chr2_4:55319798-55319817 | Msa0336050:intron | 45.0% | |
| !!! | AATATTTTAATAGAATTAAA+AGG | + | chr2_4:55316821-55316840 | None:intergenic | 5.0% |
| TGGCACGTGAGATAGAGGTT+AGG | + | chr2_4:55313676-55313695 | None:intergenic | 50.0% | |
| ACGGTGGAAGGAAAAGAGAG+TGG | + | chr2_4:55313696-55313715 | None:intergenic | 50.0% | |
| !! | GGGTTTTGTGTCGGAGAAAG+AGG | + | chr2_4:55313767-55313786 | None:intergenic | 50.0% |
| GGAGGAGGAAGCTGAATCAA+CGG | - | chr2_4:55313987-55314006 | Msa0336050:CDS | 50.0% | |
| !! | GCAGAGAACGTTTTGTTGCG+AGG | - | chr2_4:55314105-55314124 | Msa0336050:CDS | 50.0% |
| CATTGGAATCACTGCTCCCA+AGG | - | chr2_4:55314153-55314172 | Msa0336050:intron | 50.0% | |
| CTTATCGCGTGTTCTTGCCT+TGG | + | chr2_4:55314173-55314192 | None:intergenic | 50.0% | |
| GTTCAACGTGGTTCTTCTGC+TGG | - | chr2_4:55314243-55314262 | Msa0336050:intron | 50.0% | |
| AACCCTAACCCTAATCGTGC+TGG | - | chr2_4:55314294-55314313 | Msa0336050:CDS | 50.0% | |
| ACCCTAACCCTAATCGTGCT+GGG | - | chr2_4:55314295-55314314 | Msa0336050:CDS | 50.0% | |
| ACCCAGCACGATTAGGGTTA+GGG | + | chr2_4:55314299-55314318 | None:intergenic | 50.0% | |
| GAAGAAGACCCAGCACGATT+AGG | + | chr2_4:55314306-55314325 | None:intergenic | 50.0% | |
| GGATGAAGAAAGTGGAGAGG+AGG | - | chr2_4:55314368-55314387 | Msa0336050:CDS | 50.0% | |
| !! | GAGGAGCTTGGATTGGTTGT+TGG | - | chr2_4:55314387-55314406 | Msa0336050:CDS | 50.0% |
| AAGGCCAGTGATAGAGAACG+AGG | - | chr2_4:55314587-55314606 | Msa0336050:intron | 50.0% | |
| AGGCCAGTGATAGAGAACGA+GGG | - | chr2_4:55314588-55314607 | Msa0336050:intron | 50.0% | |
| AAGCCCTCGTTCTCTATCAC+TGG | + | chr2_4:55314594-55314613 | None:intergenic | 50.0% | |
| GGTAATCCTGTTGTTAGCGG+CGG | - | chr2_4:55314621-55314640 | Msa0336050:intron | 50.0% | |
| !! | GTTGATGAAGGCTTTGGAGG+TGG | + | chr2_4:55314678-55314697 | None:intergenic | 50.0% |
| AATGCAGGATCACCAAGGAG+AGG | - | chr2_4:55314744-55314763 | Msa0336050:intron | 50.0% | |
| !! | TGCGTGGCCTGTTGTTGTTT+CGG | - | chr2_4:55314770-55314789 | Msa0336050:intron | 50.0% |
| GTCCTAGCCGAAACAACAAC+AGG | + | chr2_4:55314780-55314799 | None:intergenic | 50.0% | |
| TCACTTTCACTATGAGCCCG+GGG | + | chr2_4:55314831-55314850 | None:intergenic | 50.0% | |
| CGGGCTCATAGTGAAAGTGA+AGG | - | chr2_4:55314831-55314850 | Msa0336050:intron | 50.0% | |
| AACAACTCCCTCGCCTAACT+GGG | + | chr2_4:55314996-55315015 | None:intergenic | 50.0% | |
| TAACAACTCCCTCGCCTAAC+TGG | + | chr2_4:55314997-55315016 | None:intergenic | 50.0% | |
| AGTTAGGCGAGGGAGTTGTT+AGG | - | chr2_4:55314996-55315015 | Msa0336050:CDS | 50.0% | |
| TGTCGCTCTCTTTCCTGACA+TGG | + | chr2_4:55315483-55315502 | None:intergenic | 50.0% | |
| ACACTTGGTCTGCAACAGCA+CGG | + | chr2_4:55315578-55315597 | None:intergenic | 50.0% | |
| GCTGTTGCAGACCAAGTGTA+CGG | - | chr2_4:55315579-55315598 | Msa0336050:intron | 50.0% | |
| CTGTTGCAGACCAAGTGTAC+GGG | - | chr2_4:55315580-55315599 | Msa0336050:intron | 50.0% | |
| TGTTGCAGACCAAGTGTACG+GGG | - | chr2_4:55315581-55315600 | Msa0336050:intron | 50.0% | |
| ! | ATGAAGGTCCCTGGGTTTTG+TGG | - | chr2_4:55315817-55315836 | Msa0336050:intron | 50.0% |
| TCATTCTGGTCACACTCCTG+TGG | - | chr2_4:55316574-55316593 | Msa0336050:intron | 50.0% | |
| GTGAGCAAGAAACGTCCATG+AGG | + | chr2_4:55316631-55316650 | None:intergenic | 50.0% | |
| AAACCTACGCCTGCATTTGC+TGG | - | chr2_4:55317008-55317027 | Msa0336050:intron | 50.0% | |
| AACCTACGCCTGCATTTGCT+GGG | - | chr2_4:55317009-55317028 | Msa0336050:intron | 50.0% | |
| CCTAAAAGCCCAGCAAATGC+AGG | + | chr2_4:55317020-55317039 | None:intergenic | 50.0% | |
| !! | CCTGCATTTGCTGGGCTTTT+AGG | - | chr2_4:55317017-55317036 | Msa0336050:intron | 50.0% |
| TGTGCCAATTAATCCGGCTG+TGG | - | chr2_4:55317206-55317225 | Msa0336050:intron | 50.0% | |
| GTGCCAATTAATCCGGCTGT+GGG | - | chr2_4:55317207-55317226 | Msa0336050:intron | 50.0% | |
| GAACCCACAGCCGGATTAAT+TGG | + | chr2_4:55317213-55317232 | None:intergenic | 50.0% | |
| GAACAATCAGAACCCACAGC+CGG | + | chr2_4:55317222-55317241 | None:intergenic | 50.0% | |
| !! | ACTAAATATGGGCTGGGCGA+GGG | + | chr2_4:55317245-55317264 | None:intergenic | 50.0% |
| !! | AACTAAATATGGGCTGGGCG+AGG | + | chr2_4:55317246-55317265 | None:intergenic | 50.0% |
| ACAAAAAAGGGCCGGGAGAA+GGG | + | chr2_4:55317399-55317418 | None:intergenic | 50.0% | |
| AACAAAAAAGGGCCGGGAGA+AGG | + | chr2_4:55317400-55317419 | None:intergenic | 50.0% | |
| CGGGGATATACTTGGGTCTT+TGG | - | chr2_4:55317707-55317726 | Msa0336050:intron | 50.0% | |
| ! | TAGGCGTACTGGTGGTGTAT+CGG | + | chr2_4:55318755-55318774 | None:intergenic | 50.0% |
| ACAACTCCCTTGTTGACCCA+CGG | - | chr2_4:55318797-55318816 | Msa0336050:intron | 50.0% | |
| CCAAGTCCTGCACCAATTGT+GGG | + | chr2_4:55318826-55318845 | None:intergenic | 50.0% | |
| CCACAATTGGTGCAGGACTT+GGG | - | chr2_4:55318824-55318843 | Msa0336050:intron | 50.0% | |
| TTGGGTTCAGCTCTCTTCGT+GGG | - | chr2_4:55318842-55318861 | Msa0336050:CDS | 50.0% | |
| !! | CTGACAGGCACTTTTAGCTG+AGG | - | chr2_4:55319282-55319301 | Msa0336050:CDS | 50.0% |
| !! | GACAGGCACTTTTAGCTGAG+GGG | - | chr2_4:55319284-55319303 | Msa0336050:CDS | 50.0% |
| ! | TTGCCGTGATGGAAGCTTCT+CGG | - | chr2_4:55319350-55319369 | Msa0336050:CDS | 50.0% |
| GCTTAAATGTACCACCGGCA+AGG | + | chr2_4:55319384-55319403 | None:intergenic | 50.0% | |
| ATGTGAGTTGCAGGATCGTC+AGG | - | chr2_4:55319610-55319629 | Msa0336050:five_prime_UTR | 50.0% | |
| AGTGATCCCAGGATGGAAAG+CGG | - | chr2_4:55319634-55319653 | Msa0336050:intron | 50.0% | |
| TCTTTCCCGCTTTCCATCCT+GGG | + | chr2_4:55319643-55319662 | None:intergenic | 50.0% | |
| TTCTTTCCCGCTTTCCATCC+TGG | + | chr2_4:55319644-55319663 | None:intergenic | 50.0% | |
| GAGAGTGGCACGTGAGATAG+AGG | + | chr2_4:55313681-55313700 | None:intergenic | 55.0% | |
| GGAGGAAGCTGAATCAACGG+TGG | - | chr2_4:55313990-55314009 | Msa0336050:CDS | 55.0% | |
| GACCCAGCACGATTAGGGTT+AGG | + | chr2_4:55314300-55314319 | None:intergenic | 55.0% | |
| TGCACCTGTGTAACGTGCTC+CGG | + | chr2_4:55314336-55314355 | None:intergenic | 55.0% | |
| GAAAGTGGAGAGGAGGAGCT+TGG | - | chr2_4:55314375-55314394 | Msa0336050:CDS | 55.0% | |
| TGGAGAGGAGGAGCTTGGAT+TGG | - | chr2_4:55314380-55314399 | Msa0336050:CDS | 55.0% | |
| AGAGAACGAGGGCTTGTGTG+AGG | - | chr2_4:55314599-55314618 | Msa0336050:intron | 55.0% | |
| GAGAACGAGGGCTTGTGTGA+GGG | - | chr2_4:55314600-55314619 | Msa0336050:intron | 55.0% | |
| AATCCTGTTGTTAGCGGCGG+TGG | - | chr2_4:55314624-55314643 | Msa0336050:intron | 55.0% | |
| TTTGGAGGTGGAACAGGTGG+AGG | + | chr2_4:55314666-55314685 | None:intergenic | 55.0% | |
| !! | GAAGGCTTTGGAGGTGGAAC+AGG | + | chr2_4:55314672-55314691 | None:intergenic | 55.0% |
| !! | GGCCTGTTGTTGTTTCGGCT+AGG | - | chr2_4:55314775-55314794 | Msa0336050:intron | 55.0% |
| ACAACTCCCTCGCCTAACTG+GGG | + | chr2_4:55314995-55315014 | None:intergenic | 55.0% | |
| GGTCTGCAACAGCACGGAAA+AGG | + | chr2_4:55315572-55315591 | None:intergenic | 55.0% | |
| AGACCAAGTGTACGGGGACT+CGG | - | chr2_4:55315587-55315606 | Msa0336050:intron | 55.0% | |
| ATTCCGAGTCCCCGTACACT+TGG | + | chr2_4:55315593-55315612 | None:intergenic | 55.0% | |
| GAGAAGACCGTTCAAACCCG+TGG | + | chr2_4:55315778-55315797 | None:intergenic | 55.0% | |
| TGCCACTACCAGTCTGCCAT+AGG | - | chr2_4:55315880-55315899 | Msa0336050:intron | 55.0% | |
| CACCTATGGCAGACTGGTAG+TGG | + | chr2_4:55315885-55315904 | None:intergenic | 55.0% | |
| CACTACCAGTCTGCCATAGG+TGG | - | chr2_4:55315883-55315902 | Msa0336050:intron | 55.0% | |
| AAATTCATGCTGCCAGCCCC+AGG | + | chr2_4:55316011-55316030 | None:intergenic | 55.0% | |
| ! | ACGTCTTTAGGAGCGGGAGA+GGG | - | chr2_4:55316881-55316900 | Msa0336050:intron | 55.0% |
| !! | CTAAATATGGGCTGGGCGAG+GGG | + | chr2_4:55317244-55317263 | None:intergenic | 55.0% |
| CCCACAATTGGTGCAGGACT+TGG | - | chr2_4:55318823-55318842 | Msa0336050:intron | 55.0% | |
| CCCAAGTCCTGCACCAATTG+TGG | + | chr2_4:55318827-55318846 | None:intergenic | 55.0% | |
| CTTGGGTTCAGCTCTCTTCG+TGG | - | chr2_4:55318841-55318860 | Msa0336050:CDS | 55.0% | |
| TGGGTTCAGCTCTCTTCGTG+GGG | - | chr2_4:55318843-55318862 | Msa0336050:CDS | 55.0% | |
| !! | AGGCACTTTTAGCTGAGGGG+CGG | - | chr2_4:55319287-55319306 | Msa0336050:CDS | 55.0% |
| ! | TGCCGTGATGGAAGCTTCTC+GGG | - | chr2_4:55319351-55319370 | Msa0336050:CDS | 55.0% |
| AGCCCGAGAAGCTTCCATCA+CGG | + | chr2_4:55319356-55319375 | None:intergenic | 55.0% | |
| TCTCGGGCTGAATACCTTGC+CGG | - | chr2_4:55319367-55319386 | Msa0336050:CDS | 55.0% | |
| ACTGCTGAGCCATCTTCCTC+TGG | - | chr2_4:55319436-55319455 | Msa0336050:CDS | 55.0% | |
| GATCGTCAGGTAGTGATCCC+AGG | - | chr2_4:55319623-55319642 | Msa0336050:intron | 55.0% | |
| GTCAGGTAGTGATCCCAGGA+TGG | - | chr2_4:55319627-55319646 | Msa0336050:intron | 55.0% | |
| GTGATCCCAGGATGGAAAGC+GGG | - | chr2_4:55319635-55319654 | Msa0336050:intron | 55.0% | |
| GGCAGCAGTAGCAGACGTAA+AGG | - | chr2_4:55319793-55319812 | Msa0336050:intron | 55.0% | |
| TGGGAGGTGGTTGCAGGTTG+CGG | - | chr2_4:55313960-55313979 | Msa0336050:CDS | 60.0% | |
| GTGGTTGCAGGTTGCGGTTG+CGG | - | chr2_4:55313966-55313985 | Msa0336050:CDS | 60.0% | |
| !! | GGCTTTGGAGGTGGAACAGG+TGG | + | chr2_4:55314669-55314688 | None:intergenic | 60.0% |
| CACCAAGGAGAGGATCTGCG+TGG | - | chr2_4:55314754-55314773 | Msa0336050:intron | 60.0% | |
| GATGAAGGTCGAGACCCAGC+AGG | + | chr2_4:55314807-55314826 | None:intergenic | 60.0% | |
| GGTCTCGACCTTCATCTCCC+CGG | - | chr2_4:55314811-55314830 | Msa0336050:intron | 60.0% | |
| GTCTCGACCTTCATCTCCCC+GGG | - | chr2_4:55314812-55314831 | Msa0336050:intron | 60.0% | |
| CTATGAGCCCGGGGAGATGA+AGG | + | chr2_4:55314822-55314841 | None:intergenic | 60.0% | |
| TCTATGCACGCCGGAATGCC+TGG | - | chr2_4:55315990-55316009 | Msa0336050:intron | 60.0% | |
| CTATGCACGCCGGAATGCCT+GGG | - | chr2_4:55315991-55316010 | Msa0336050:intron | 60.0% | |
| TATGCACGCCGGAATGCCTG+GGG | - | chr2_4:55315992-55316011 | Msa0336050:intron | 60.0% | |
| CAGCTGGCCCATTTCTCCTC+TGG | - | chr2_4:55316404-55316423 | Msa0336050:intron | 60.0% | |
| ! | CACGTCTTTAGGAGCGGGAG+AGG | - | chr2_4:55316880-55316899 | Msa0336050:intron | 60.0% |
| AGCCCAGCAAATGCAGGCGT+AGG | + | chr2_4:55317014-55317033 | None:intergenic | 60.0% | |
| CACCAATTGTGGGACGCCGT+GGG | + | chr2_4:55318816-55318835 | None:intergenic | 60.0% | |
| AACTTGACGGCTGAGGCTGC+TGG | - | chr2_4:55319243-55319262 | Msa0336050:CDS | 60.0% | |
| GTTGCAGGTTGCGGTTGCGG+AGG | - | chr2_4:55313969-55313988 | Msa0336050:CDS | 65.0% | |
| GTGCTGGGTCTTCTTCGGCC+CGG | - | chr2_4:55314310-55314329 | Msa0336050:CDS | 65.0% | |
| CTGTGTAACGTGCTCCGGCC+GGG | + | chr2_4:55314331-55314350 | None:intergenic | 65.0% | |
| CCTGTGTAACGTGCTCCGGC+CGG | + | chr2_4:55314332-55314351 | None:intergenic | 65.0% | |
| CCACCACCGCCGCTAACAAC+AGG | + | chr2_4:55314630-55314649 | None:intergenic | 65.0% | |
| CCTGTTGTTAGCGGCGGTGG+TGG | - | chr2_4:55314627-55314646 | Msa0336050:intron | 65.0% | |
| GGTGGAACAGGTGGAGGTGG+AGG | + | chr2_4:55314660-55314679 | None:intergenic | 65.0% | |
| GGAGGTGGAACAGGTGGAGG+TGG | + | chr2_4:55314663-55314682 | None:intergenic | 65.0% | |
| GGCCACGCAGATCCTCTCCT+TGG | + | chr2_4:55314759-55314778 | None:intergenic | 65.0% | |
| TCGGCTAGGACTTCGCCTGC+TGG | - | chr2_4:55314789-55314808 | Msa0336050:intron | 65.0% | |
| CGGCTAGGACTTCGCCTGCT+GGG | - | chr2_4:55314790-55314809 | Msa0336050:intron | 65.0% | |
| GGGACGCCGTGGGTCAACAA+GGG | + | chr2_4:55318806-55318825 | None:intergenic | 65.0% | |
| TGGGACGCCGTGGGTCAACA+AGG | + | chr2_4:55318807-55318826 | None:intergenic | 65.0% | |
| GACCCACGGCGTCCCACAAT+TGG | - | chr2_4:55318811-55318830 | Msa0336050:intron | 65.0% | |
| GCACCAATTGTGGGACGCCG+TGG | + | chr2_4:55318817-55318836 | None:intergenic | 65.0% | |
| CGGCGTCCCACAATTGGTGC+AGG | - | chr2_4:55318817-55318836 | Msa0336050:intron | 65.0% | |
| CGGGCTGAATACCTTGCCGG+TGG | - | chr2_4:55319370-55319389 | Msa0336050:CDS | 65.0% | |
| GCAGGTTGCGGTTGCGGAGG+AGG | - | chr2_4:55313972-55313991 | Msa0336050:CDS | 70.0% | |
| TGGGTCTTCTTCGGCCCGGC+CGG | - | chr2_4:55314314-55314333 | Msa0336050:CDS | 70.0% | |
| CCGGCCGGAGCACGTTACAC+AGG | - | chr2_4:55314329-55314348 | Msa0336050:CDS | 70.0% | |
| GCTGCCAGCCCCAGGCATTC+CGG | + | chr2_4:55316003-55316022 | None:intergenic | 70.0% | |
| CACGCCGGAATGCCTGGGGC+TGG | - | chr2_4:55315996-55316015 | Msa0336050:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 55313645 | 55320102 | 55313645 | ID=Msa0336050;Name=Msa0336050 |
| chr2_4 | mRNA | 55313645 | 55320102 | 55313645 | ID=Msa0336050-mRNA-1;Parent=Msa0336050;Name=Msa0336050-mRNA-1;_AED=0.14;_eAED=0.14;_QI=371|0.87|1|1|0.75|0.66|9|271|509 |
| chr2_4 | exon | 55313645 | 55314124 | 55313645 | ID=Msa0336050-mRNA-1:exon:16803;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55314284 | 55314458 | 55314284 | ID=Msa0336050-mRNA-1:exon:16802;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55314883 | 55315028 | 55314883 | ID=Msa0336050-mRNA-1:exon:16801;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55315111 | 55315189 | 55315111 | ID=Msa0336050-mRNA-1:exon:16800;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55316779 | 55316856 | 55316779 | ID=Msa0336050-mRNA-1:exon:16799;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55318097 | 55318258 | 55318097 | ID=Msa0336050-mRNA-1:exon:16798;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55318839 | 55319638 | 55318839 | ID=Msa0336050-mRNA-1:exon:16797;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55319723 | 55319771 | 55319723 | ID=Msa0336050-mRNA-1:exon:16796;Parent=Msa0336050-mRNA-1 |
| chr2_4 | exon | 55319900 | 55320102 | 55319900 | ID=Msa0336050-mRNA-1:exon:16795;Parent=Msa0336050-mRNA-1 |
| chr2_4 | five_prime_UTR | 55319900 | 55320102 | 55319900 | ID=Msa0336050-mRNA-1:five_prime_utr;Parent=Msa0336050-mRNA-1 |
| chr2_4 | five_prime_UTR | 55319723 | 55319771 | 55319723 | ID=Msa0336050-mRNA-1:five_prime_utr;Parent=Msa0336050-mRNA-1 |
| chr2_4 | five_prime_UTR | 55319520 | 55319638 | 55319520 | ID=Msa0336050-mRNA-1:five_prime_utr;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55318839 | 55319519 | 55318839 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55318097 | 55318258 | 55318097 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55316779 | 55316856 | 55316779 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55315111 | 55315189 | 55315111 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55314883 | 55315028 | 55314883 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55314284 | 55314458 | 55314284 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | CDS | 55313916 | 55314124 | 55313916 | ID=Msa0336050-mRNA-1:cds;Parent=Msa0336050-mRNA-1 |
| chr2_4 | three_prime_UTR | 55313645 | 55313915 | 55313645 | ID=Msa0336050-mRNA-1:three_prime_utr;Parent=Msa0336050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
