Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691530 | AES89723.2 | 89.869 | 306 | 8 | 3 | 1 | 306 | 1 | 283 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691530 | sp|Q9UTE6|MAK16_SCHPO | 57.812 | 192 | 79 | 1 | 1 | 192 | 1 | 190 | 1.15e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691530 | G7JUY3 | 89.869 | 306 | 8 | 3 | 1 | 306 | 1 | 283 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0691530 | 0.807186 | 5.716840e-50 | -8.615850e-47 |
| Msa0003780 | Msa0691530 | 0.822757 | 1.996571e-53 | -8.615850e-47 |
| Msa0030200 | Msa0691530 | 0.802724 | 4.897784e-49 | -8.615850e-47 |
| Msa0032090 | Msa0691530 | 0.835199 | 1.927815e-56 | -8.615850e-47 |
| Msa0032430 | Msa0691530 | 0.839612 | 1.428236e-57 | -8.615850e-47 |
| Msa0033110 | Msa0691530 | 0.828666 | 7.919435e-55 | -8.615850e-47 |
| Msa0033260 | Msa0691530 | 0.831088 | 2.034983e-55 | -8.615850e-47 |
| Msa0040690 | Msa0691530 | 0.833937 | 4.002315e-56 | -8.615850e-47 |
| Msa0043660 | Msa0691530 | 0.820315 | 7.318657e-53 | -8.615850e-47 |
| Msa0047160 | Msa0691530 | 0.838718 | 2.434546e-57 | -8.615850e-47 |
| Msa0054440 | Msa0691530 | 0.805740 | 1.153891e-49 | -8.615850e-47 |
| Msa0054480 | Msa0691530 | 0.809270 | 2.055487e-50 | -8.615850e-47 |
| Msa0059040 | Msa0691530 | 0.811862 | 5.662632e-51 | -8.615850e-47 |
| Msa0059110 | Msa0691530 | 0.823626 | 1.251655e-53 | -8.615850e-47 |
| Msa0070700 | Msa0691530 | 0.823791 | 1.145030e-53 | -8.615850e-47 |
| Msa0079380 | Msa0691530 | 0.834303 | 3.240897e-56 | -8.615850e-47 |
| Msa0079820 | Msa0691530 | 0.817746 | 2.810267e-52 | -8.615850e-47 |
| Msa0086750 | Msa0691530 | 0.820647 | 6.141279e-53 | -8.615850e-47 |
| Msa0091410 | Msa0691530 | 0.830561 | 2.739422e-55 | -8.615850e-47 |
| Msa0094470 | Msa0691530 | 0.849980 | 2.282084e-60 | -8.615850e-47 |
| Msa0100740 | Msa0691530 | 0.801923 | 7.159175e-49 | -8.615850e-47 |
| Msa0115130 | Msa0691530 | 0.808917 | 2.446637e-50 | -8.615850e-47 |
| Msa0115400 | Msa0691530 | 0.812016 | 5.241520e-51 | -8.615850e-47 |
| Msa0118590 | Msa0691530 | 0.828725 | 7.664344e-55 | -8.615850e-47 |
| Msa0608500 | Msa0691530 | 0.940811 | 1.230893e-100 | -8.615850e-47 |
| Msa0615440 | Msa0691530 | 0.812612 | 3.884386e-51 | -8.615850e-47 |
| Msa0625720 | Msa0691530 | 0.814149 | 1.784952e-51 | -8.615850e-47 |
| Msa0626630 | Msa0691530 | 0.822676 | 2.084940e-53 | -8.615850e-47 |
| Msa0643560 | Msa0691530 | 0.808011 | 3.819814e-50 | -8.615850e-47 |
| Msa0649020 | Msa0691530 | 0.949457 | 1.223311e-107 | -8.615850e-47 |
| Msa0649050 | Msa0691530 | 0.958668 | 1.333399e-116 | -8.615850e-47 |
| Msa0663390 | Msa0691530 | 0.822117 | 2.812055e-53 | -8.615850e-47 |
| Msa0664750 | Msa0691530 | 0.820782 | 5.717480e-53 | -8.615850e-47 |
| Msa0689260 | Msa0691530 | 0.836304 | 1.012406e-56 | -8.615850e-47 |
| Msa0691530 | Msa0698490 | 0.817551 | 3.110368e-52 | -8.615850e-47 |
| Msa0691530 | Msa0698660 | 0.810282 | 1.245614e-50 | -8.615850e-47 |
| Msa0691530 | Msa0698800 | 0.813270 | 2.786058e-51 | -8.615850e-47 |
| Msa0691530 | Msa0707250 | 0.818090 | 2.350549e-52 | -8.615850e-47 |
| Msa0691530 | Msa0711780 | 0.809341 | 1.984947e-50 | -8.615850e-47 |
| Msa0691530 | Msa0788850 | 0.816372 | 5.721426e-52 | -8.615850e-47 |
| Msa0691530 | Msa0794670 | 0.808428 | 3.111795e-50 | -8.615850e-47 |
| Msa0691530 | Msa0831530 | 0.807157 | 5.797699e-50 | -8.615850e-47 |
| Msa0691530 | Msa0876810 | 0.813938 | 1.986930e-51 | -8.615850e-47 |
| Msa0691530 | Msa0902760 | 0.815274 | 1.005511e-51 | -8.615850e-47 |
| Msa0691530 | Msa0989540 | 0.823144 | 1.622528e-53 | -8.615850e-47 |
| Msa0691530 | Msa1006840 | 0.850143 | 2.054816e-60 | -8.615850e-47 |
| Msa0691530 | Msa1012740 | 0.800960 | 1.127902e-48 | -8.615850e-47 |
| Msa0691530 | Msa1013400 | 0.808812 | 2.576702e-50 | -8.615850e-47 |
| Msa0691530 | Msa1043690 | 0.812876 | 3.400560e-51 | -8.615850e-47 |
| Msa0691530 | Msa1093530 | 0.815718 | 8.006730e-52 | -8.615850e-47 |
| Msa0691530 | Msa1104140 | 0.838433 | 2.884948e-57 | -8.615850e-47 |
| Msa0691530 | Msa1106700 | 0.813447 | 2.548557e-51 | -8.615850e-47 |
| Msa0691530 | Msa1121440 | 0.802499 | 5.448912e-49 | -8.615850e-47 |
| Msa0691530 | Msa1135890 | 0.819266 | 1.271376e-52 | -8.615850e-47 |
| Msa0691530 | Msa1160590 | 0.802207 | 6.258835e-49 | -8.615850e-47 |
| Msa0691530 | Msa1181250 | 0.813442 | 2.554204e-51 | -8.615850e-47 |
| Msa0691530 | Msa1181330 | 0.807172 | 5.755453e-50 | -8.615850e-47 |
| Msa0691530 | Msa1181910 | 0.813029 | 3.148195e-51 | -8.615850e-47 |
| Msa0691530 | Msa1208880 | 0.816614 | 5.050939e-52 | -8.615850e-47 |
| Msa0691530 | Msa1209200 | 0.864565 | 1.110012e-64 | -8.615850e-47 |
| Msa0691530 | Msa1245930 | 0.814586 | 1.429042e-51 | -8.615850e-47 |
| Msa0691530 | Msa1254730 | 0.816623 | 5.027405e-52 | -8.615850e-47 |
| Msa0691530 | Msa1259060 | 0.813148 | 2.963106e-51 | -8.615850e-47 |
| Msa0691530 | Msa1265630 | 0.841279 | 5.231982e-58 | -8.615850e-47 |
| Msa0691530 | Msa1294820 | 0.815772 | 7.787777e-52 | -8.615850e-47 |
| Msa0691530 | Msa1332590 | 0.834152 | 3.535894e-56 | -8.615850e-47 |
| Msa0691530 | Msa1358250 | 0.836482 | 9.121296e-57 | -8.615850e-47 |
| Msa0691530 | Msa1374120 | 0.834053 | 3.743056e-56 | -8.615850e-47 |
| Msa0691530 | Msa1382560 | 0.805387 | 1.368158e-49 | -8.615850e-47 |
| Msa0691530 | Msa1382620 | 0.814568 | 1.441976e-51 | -8.615850e-47 |
| Msa0691530 | Msa1392780 | 0.820754 | 5.803903e-53 | -8.615850e-47 |
| Msa0691530 | Msa1393570 | 0.815145 | 1.074023e-51 | -8.615850e-47 |
| Msa0691530 | Msa1394290 | 0.865151 | 7.270431e-65 | -8.615850e-47 |
| Msa0691530 | Msa1400580 | 0.821123 | 4.772143e-53 | -8.615850e-47 |
| Msa0691530 | Msa1419870 | 0.803104 | 4.088049e-49 | -8.615850e-47 |
| Msa0691530 | Msa1432700 | 0.829313 | 5.520238e-55 | -8.615850e-47 |
| Msa0691530 | Msa1446950 | 0.804154 | 2.475466e-49 | -8.615850e-47 |
| Msa0691530 | Msa1457920 | 0.851119 | 1.091979e-60 | -8.615850e-47 |
| Msa0137550 | Msa0691530 | 0.831418 | 1.687881e-55 | -8.615850e-47 |
| Msa0144370 | Msa0691530 | 0.833730 | 4.509409e-56 | -8.615850e-47 |
| Msa0150300 | Msa0691530 | 0.803240 | 3.830391e-49 | -8.615850e-47 |
| Msa0159170 | Msa0691530 | 0.802377 | 5.773833e-49 | -8.615850e-47 |
| Msa0165660 | Msa0691530 | 0.825735 | 3.985493e-54 | -8.615850e-47 |
| Msa0172070 | Msa0691530 | 0.840247 | 9.751405e-58 | -8.615850e-47 |
| Msa0189300 | Msa0691530 | 0.843901 | 1.053340e-58 | -8.615850e-47 |
| Msa0220720 | Msa0691530 | 0.833379 | 5.518034e-56 | -8.615850e-47 |
| Msa0231660 | Msa0691530 | 0.816473 | 5.430406e-52 | -8.615850e-47 |
| Msa0232080 | Msa0691530 | 0.802383 | 5.758409e-49 | -8.615850e-47 |
| Msa0366890 | Msa0691530 | 0.806327 | 8.682179e-50 | -8.615850e-47 |
| Msa0385580 | Msa0691530 | 0.812095 | 5.037850e-51 | -8.615850e-47 |
| Msa0388700 | Msa0691530 | 0.800054 | 1.725119e-48 | -8.615850e-47 |
| Msa0395820 | Msa0691530 | 0.803611 | 3.210135e-49 | -8.615850e-47 |
| Msa0402650 | Msa0691530 | 0.821201 | 4.578075e-53 | -8.615850e-47 |
| Msa0481530 | Msa0691530 | 0.821549 | 3.806634e-53 | -8.615850e-47 |
| Msa0482130 | Msa0691530 | 0.807049 | 6.109804e-50 | -8.615850e-47 |
| Msa0258390 | Msa0691530 | 0.839437 | 1.585930e-57 | -8.615850e-47 |
| Msa0279240 | Msa0691530 | 0.828292 | 9.750622e-55 | -8.615850e-47 |
| Msa0297610 | Msa0691530 | 0.826465 | 2.673042e-54 | -8.615850e-47 |
| Msa0299870 | Msa0691530 | 0.823539 | 1.311954e-53 | -8.615850e-47 |
| Msa0309750 | Msa0691530 | 0.815620 | 8.423232e-52 | -8.615850e-47 |
| Msa0318980 | Msa0691530 | 0.815669 | 8.213390e-52 | -8.615850e-47 |
| Msa0327330 | Msa0691530 | 0.802072 | 6.671693e-49 | -8.615850e-47 |
| Msa0335730 | Msa0691530 | 0.835690 | 1.448883e-56 | -8.615850e-47 |
| Msa0337240 | Msa0691530 | 0.807808 | 4.218499e-50 | -8.615850e-47 |
| Msa0340380 | Msa0691530 | 0.809920 | 1.490337e-50 | -8.615850e-47 |
| Msa0357900 | Msa0691530 | 0.832875 | 7.364556e-56 | -8.615850e-47 |
| Msa0497210 | Msa0691530 | 0.815462 | 9.131404e-52 | -8.615850e-47 |
| Msa0529890 | Msa0691530 | 0.812633 | 3.842613e-51 | -8.615850e-47 |
| Msa0542090 | Msa0691530 | 0.804184 | 2.440279e-49 | -8.615850e-47 |
| Msa0542130 | Msa0691530 | 0.804305 | 2.302495e-49 | -8.615850e-47 |
| Msa0554920 | Msa0691530 | 0.970954 | 2.082130e-132 | -8.615850e-47 |
| Msa0561630 | Msa0691530 | 0.801759 | 7.739355e-49 | -8.615850e-47 |
| Msa0581280 | Msa0691530 | 0.854152 | 1.489259e-61 | -8.615850e-47 |
| Msa0585560 | Msa0691530 | 0.822194 | 2.698732e-53 | -8.615850e-47 |
| Msa0588360 | Msa0691530 | 0.809566 | 1.776237e-50 | -8.615850e-47 |
| Msa0601150 | Msa0691530 | 0.801433 | 9.023720e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691530 | MtrunA17_Chr2g0332911 | 71.045 | 335 | 64 | 2 | 1 | 305 | 1 | 332 | 7.64e-156 | 438 |
| Msa0691530 | MtrunA17_Chr4g0040641 | 91.667 | 192 | 13 | 2 | 115 | 306 | 1 | 189 | 2.87e-102 | 297 |
| Msa0691530 | MtrunA17_Chr4g0040651 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 1.15e-83 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691530 | AT1G23280.1 | 74.611 | 193 | 47 | 1 | 1 | 193 | 1 | 191 | 1.34e-105 | 310 |
Find 61 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACGACTAATCAAAATT+TGG | 0.234048 | 4_4:+59690252 | None:intergenic |
| GAAGATGATATAGAAGATTT+TGG | 0.237046 | 4_4:-59692298 | Msa0691530:CDS |
| AAACGACGTTTGCTTCATTC+AGG | 0.288021 | 4_4:+59694459 | None:intergenic |
| GACTTTAGCTTCAAAGAAAC+TGG | 0.316024 | 4_4:-59691090 | Msa0691530:CDS |
| TATCCGCATCTGAGTCATTT+TGG | 0.319490 | 4_4:+59693020 | None:intergenic |
| CAAATTCCGGTGACATTGTA+AGG | 0.322485 | 4_4:+59694246 | None:intergenic |
| AGGTTATATGGCAAGTTATC+AGG | 0.341917 | 4_4:-59694323 | Msa0691530:CDS |
| TGAACTTCGGTTACAAATTC+CGG | 0.346804 | 4_4:+59694233 | None:intergenic |
| GTCTATTGAGAAAGAGCTAT+TGG | 0.348403 | 4_4:-59692608 | Msa0691530:CDS |
| TTAATCAAAGGAAAGCAAAA+AGG | 0.387263 | 4_4:-59691118 | Msa0691530:CDS |
| TGCAGCACGATGAGGTTATA+TGG | 0.401960 | 4_4:-59694335 | Msa0691530:CDS |
| ATCTTGTGTATAAGAAGCTT+GGG | 0.406860 | 4_4:+59693057 | None:intergenic |
| TACTGCACTGACAGATGTAT+TGG | 0.411812 | 4_4:-59693080 | Msa0691530:intron |
| ACTCTTTCCCACAAATCCTT+TGG | 0.416287 | 4_4:+59693245 | None:intergenic |
| AATGGCAGCGATGATGAAAA+TGG | 0.418107 | 4_4:-59692247 | Msa0691530:intron |
| AAAGGGAATGGTTTCGATGC+AGG | 0.431671 | 4_4:+59694412 | None:intergenic |
| TATCTTGTGTATAAGAAGCT+TGG | 0.432339 | 4_4:+59693056 | None:intergenic |
| TGCATATATCACCTCCTGTC+TGG | 0.447878 | 4_4:+59692563 | None:intergenic |
| TGTTGAAGAAGAGGATGAAA+TGG | 0.458882 | 4_4:-59692485 | Msa0691530:intron |
| CTCATACGCCAAAGGATTTG+TGG | 0.458884 | 4_4:-59693253 | Msa0691530:CDS |
| ATTGAAGAGGAAACAGAAAC+AGG | 0.469123 | 4_4:-59692346 | Msa0691530:CDS |
| AGCTTCAAAGAAACTGGAAA+AGG | 0.487427 | 4_4:-59691084 | Msa0691530:CDS |
| ATCTCAAGCTGTTGAAGAAG+AGG | 0.492311 | 4_4:-59692494 | Msa0691530:CDS |
| AACGACACTGCCAAGAAAAG+AGG | 0.508652 | 4_4:-59692770 | Msa0691530:CDS |
| GCACAACCATTGCAGTTACA+TGG | 0.509010 | 4_4:-59694301 | Msa0691530:CDS |
| TGAAGTCATTGACAAACATC+TGG | 0.510638 | 4_4:-59693192 | Msa0691530:intron |
| CATAGCGACTATTAGCTAAA+GGG | 0.510834 | 4_4:+59694208 | None:intergenic |
| AAAAGCAGCTGTGCTAGAAA+AGG | 0.513340 | 4_4:-59692713 | Msa0691530:intron |
| ATTCACGAGTCACAGGGAAA+TGG | 0.513739 | 4_4:-59692265 | Msa0691530:CDS |
| GCATAGCGACTATTAGCTAA+AGG | 0.516741 | 4_4:+59694207 | None:intergenic |
| CTCAGATGCGGATACGTATG+AGG | 0.518871 | 4_4:-59693011 | Msa0691530:CDS |
| AGAATATGTTGAATTTGAAG+AGG | 0.522267 | 4_4:-59692320 | Msa0691530:CDS |
| AAGGGAATGGTTTCGATGCA+GGG | 0.522545 | 4_4:+59694413 | None:intergenic |
| CAATGACTTCAAGTGCCTGC+TGG | 0.525481 | 4_4:+59693204 | None:intergenic |
| TCATACGCCAAAGGATTTGT+GGG | 0.528939 | 4_4:-59693252 | Msa0691530:CDS |
| AGTGCCTGCTGGTAATTCCT+AGG | 0.529178 | 4_4:+59693215 | None:intergenic |
| GGGAAAGAGTTAAGCTGCCT+AGG | 0.548712 | 4_4:-59693232 | Msa0691530:CDS |
| GGAAACTTTCTTTGAAAACA+AGG | 0.556860 | 4_4:-59692990 | Msa0691530:intron |
| TAGCTAAAGGGCATGAACTT+CGG | 0.561734 | 4_4:+59694220 | None:intergenic |
| TTTCTTTGATTCAGAATCAG+AGG | 0.562522 | 4_4:+59691058 | None:intergenic |
| ACCATTGTCTTCACGAATGG+TGG | 0.572329 | 4_4:+59694185 | None:intergenic |
| CAAAACGGACTTTACCAGAC+AGG | 0.572560 | 4_4:-59692577 | Msa0691530:CDS |
| GTTTGAAAGGAAGCCAGTGT+TGG | 0.577184 | 4_4:-59690145 | Msa0691530:three_prime_UTR |
| AAACTGAAGCACTTAATCAA+AGG | 0.580098 | 4_4:-59691130 | Msa0691530:CDS |
| AGTACCATTGTCTTCACGAA+TGG | 0.580983 | 4_4:+59694182 | None:intergenic |
| AAATTCCGGTGACATTGTAA+GGG | 0.585183 | 4_4:+59694247 | None:intergenic |
| CTATTGGTACGCCTTCAAAA+CGG | 0.597593 | 4_4:-59692592 | Msa0691530:CDS |
| TTCTGAATCAAAGAAAGCGA+AGG | 0.608523 | 4_4:-59691051 | Msa0691530:CDS |
| AGAAACCCTTACAATGTCAC+CGG | 0.609253 | 4_4:-59694252 | Msa0691530:CDS |
| GAAAGCGAAGGTCCTCATTG+AGG | 0.612298 | 4_4:-59691039 | Msa0691530:intron |
| AACACGACGATGCTGTCGAA+AGG | 0.621867 | 4_4:-59690344 | Msa0691530:CDS |
| TTTGCAATTCACGAGTCACA+GGG | 0.623320 | 4_4:-59692271 | Msa0691530:CDS |
| GCTGCCTAGGAATTACCAGC+AGG | 0.624895 | 4_4:-59693219 | Msa0691530:CDS |
| CACAAAGATGCAGCACGATG+AGG | 0.628152 | 4_4:-59694343 | Msa0691530:exon |
| TGAAAGAGCTCATACGCCAA+AGG | 0.633610 | 4_4:-59693261 | Msa0691530:CDS |
| AGTATAAAATTACCTCAATG+AGG | 0.639733 | 4_4:+59691027 | None:intergenic |
| TACATGGCCAAAATTACCAC+CGG | 0.640975 | 4_4:-59694285 | Msa0691530:CDS |
| GCCACCATTCGTGAAGACAA+TGG | 0.656349 | 4_4:-59694186 | Msa0691530:intron |
| TGCTGTCGAAAGGCAAAGAG+CGG | 0.666319 | 4_4:-59690334 | Msa0691530:CDS |
| AACGGACTTTACCAGACAGG+AGG | 0.681084 | 4_4:-59692574 | Msa0691530:CDS |
| TGACCAAAATGACTCAGATG+CGG | 0.687329 | 4_4:-59693023 | Msa0691530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTCATTTTAATCAAAT+GGG | + | chr4_4:59690526-59690545 | None:intergenic | 15.0% |
| !!! | TAAATGTCATTTTAATCAAA+TGG | + | chr4_4:59690527-59690546 | None:intergenic | 15.0% |
| !! | ATTTGATTAAAATGACATTT+AGG | - | chr4_4:59690526-59690545 | Msa0691530:intron | 15.0% |
| !!! | AATAATAAGTTGATAGTTTA+TGG | - | chr4_4:59691194-59691213 | Msa0691530:intron | 15.0% |
| !! | ATACAAAAAAGTTATTGATA+TGG | - | chr4_4:59692024-59692043 | Msa0691530:intron | 15.0% |
| !!! | ATAATGGAAGATAATAAAAT+GGG | + | chr4_4:59693237-59693256 | None:intergenic | 15.0% |
| !!! | ATCTTTGTGATCAAATTTTA+AGG | + | chr4_4:59690194-59690213 | None:intergenic | 20.0% |
| !! | ATATAGTTATGAAATTCTTG+TGG | - | chr4_4:59690440-59690459 | Msa0691530:intron | 20.0% |
| !! | TATAGTTATGAAATTCTTGT+GGG | - | chr4_4:59690441-59690460 | Msa0691530:intron | 20.0% |
| !!! | TATTACATTTTCCATTCAAA+AGG | + | chr4_4:59691178-59691197 | None:intergenic | 20.0% |
| !! | TTATTGTTAAAAAGAAGCAA+AGG | + | chr4_4:59691600-59691619 | None:intergenic | 20.0% |
| !!! | TCCTTTATCTACTATATTTT+AGG | - | chr4_4:59691665-59691684 | Msa0691530:intron | 20.0% |
| !! | AAATTCTTAGTAACTTAACT+TGG | - | chr4_4:59692140-59692159 | Msa0691530:intron | 20.0% |
| !! | AAAGATAAAAGAAATATACC+AGG | + | chr4_4:59692178-59692197 | None:intergenic | 20.0% |
| !! | TGCTAAAATATATGTGAAAT+AGG | - | chr4_4:59692380-59692399 | Msa0691530:intron | 20.0% |
| !! | AATATATGTGAAATAGGTTA+TGG | - | chr4_4:59692386-59692405 | Msa0691530:intron | 20.0% |
| !! | AACTAAAATACAAAAGATTC+TGG | - | chr4_4:59692465-59692484 | Msa0691530:intron | 20.0% |
| !! | TAAAATAATCATCCATAGTA+TGG | + | chr4_4:59692778-59692797 | None:intergenic | 20.0% |
| !!! | TATTTTATCTTTTCCTTGTT+TGG | - | chr4_4:59692791-59692810 | Msa0691530:intron | 20.0% |
| !! | GTAAATAGATGAGTAAAAAA+TGG | + | chr4_4:59693001-59693020 | None:intergenic | 20.0% |
| !! | CTTGATAAATAAGAATCAAA+AGG | + | chr4_4:59693045-59693064 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTTATTTATCA+AGG | - | chr4_4:59693043-59693062 | Msa0691530:CDS | 20.0% |
| !!! | GTGAATTTTGTCTATTTTTT+GGG | + | chr4_4:59693173-59693192 | None:intergenic | 20.0% |
| !!! | AGTGAATTTTGTCTATTTTT+TGG | + | chr4_4:59693174-59693193 | None:intergenic | 20.0% |
| !!! | GATAATGGAAGATAATAAAA+TGG | + | chr4_4:59693238-59693257 | None:intergenic | 20.0% |
| !! | ATTAAAAAGCAATAACATGA+TGG | - | chr4_4:59693359-59693378 | Msa0691530:intron | 20.0% |
| !! | AACATTCTGTTATAATTTGA+AGG | - | chr4_4:59693688-59693707 | Msa0691530:intron | 20.0% |
| !!! | TTTAGAACTTACGAAATTTT+AGG | + | chr4_4:59694145-59694164 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTCATTGTTTTC+AGG | - | chr4_4:59694178-59694197 | Msa0691530:intron | 20.0% |
| !!! | TTATTTTGCTTTTGTTTGAA+AGG | - | chr4_4:59694390-59694409 | Msa0691530:five_prime_UTR | 20.0% |
| !!! | AATATGAGTTTTGTTTTGTT+TGG | - | chr4_4:59694436-59694455 | Msa0691530:five_prime_UTR | 20.0% |
| ! | ATAGTTATGAAATTCTTGTG+GGG | - | chr4_4:59690442-59690461 | Msa0691530:intron | 25.0% |
| ! | ACTTTGATATCTTAGACATT+TGG | - | chr4_4:59690564-59690583 | Msa0691530:intron | 25.0% |
| ! | CATGTCAATGATTATGATTA+AGG | - | chr4_4:59690630-59690649 | Msa0691530:intron | 25.0% |
| !!! | GCTGTTTTAATAAGTTATCT+TGG | - | chr4_4:59690797-59690816 | Msa0691530:intron | 25.0% |
| !! | GATGTTTTCATAAGTTATCT+TGG | - | chr4_4:59690838-59690857 | Msa0691530:intron | 25.0% |
| !! | TTTTCATAAGTTATCTTGGA+GGG | - | chr4_4:59690842-59690861 | Msa0691530:intron | 25.0% |
| ! | TGGGAGAACTTATAAAAAAA+GGG | + | chr4_4:59691076-59691095 | None:intergenic | 25.0% |
| ! | TTGGGAGAACTTATAAAAAA+AGG | + | chr4_4:59691077-59691096 | None:intergenic | 25.0% |
| !! | TTTCAATAGTTTTCATGTAG+AGG | + | chr4_4:59691272-59691291 | None:intergenic | 25.0% |
| ! | TTGTAAGTAATTGTTGTGAT+TGG | - | chr4_4:59691429-59691448 | Msa0691530:intron | 25.0% |
| ! | GCCTAAAATATAGTAGATAA+AGG | + | chr4_4:59691669-59691688 | None:intergenic | 25.0% |
| ! | ATAACATAATTTAGTACGCA+CGG | + | chr4_4:59691883-59691902 | None:intergenic | 25.0% |
| ! | AATATTCAAAAGAAACAGTG+AGG | + | chr4_4:59691915-59691934 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTATTGATATGG+TGG | - | chr4_4:59692027-59692046 | Msa0691530:intron | 25.0% |
| !! | TTTATCTTTTCAGATTGAAG+AGG | - | chr4_4:59692189-59692208 | Msa0691530:intron | 25.0% |
| ! | AGAATATGTTGAATTTGAAG+AGG | - | chr4_4:59692228-59692247 | Msa0691530:intron | 25.0% |
| !! | GAAGATGATATAGAAGATTT+TGG | - | chr4_4:59692250-59692269 | Msa0691530:CDS | 25.0% |
| ! | AAATATTTCTTCACTCATCA+AGG | - | chr4_4:59692421-59692440 | Msa0691530:intron | 25.0% |
| ! | GAAAATAGTTATCCATACTA+TGG | - | chr4_4:59692763-59692782 | Msa0691530:CDS | 25.0% |
| !!! | AATCTTCTTTTTTGCTTGTT+CGG | + | chr4_4:59693127-59693146 | None:intergenic | 25.0% |
| !! | ATTTTCCAAAATCACTAACA+AGG | + | chr4_4:59693322-59693341 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAGCAAAA+AGG | - | chr4_4:59693430-59693449 | Msa0691530:intron | 25.0% |
| ! | AGTATAAAATTACCTCAATG+AGG | + | chr4_4:59693524-59693543 | None:intergenic | 25.0% |
| ! | CACAATAGCATTTAAAAGAA+CGG | + | chr4_4:59693567-59693586 | None:intergenic | 25.0% |
| ! | GTGTGTTTGACATAATTATT+TGG | + | chr4_4:59693917-59693936 | None:intergenic | 25.0% |
| !!! | ACACTTTTGTTGTAATATTG+CGG | - | chr4_4:59693933-59693952 | Msa0691530:intron | 25.0% |
| ! | AAAATCAAAATTGTGATGTC+AGG | + | chr4_4:59694168-59694187 | None:intergenic | 25.0% |
| !! | ATTTTGTGTTAGTTACTGAT+AGG | - | chr4_4:59694249-59694268 | Msa0691530:CDS | 25.0% |
| ! | AGAAACGACTAATCAAAATT+TGG | + | chr4_4:59694299-59694318 | None:intergenic | 25.0% |
| !! | ATTTTTATATTTGCCAACAC+TGG | + | chr4_4:59694419-59694438 | None:intergenic | 25.0% |
| !!! | TTGAGGTTTTAGGGTTTAAA+GGG | + | chr4_4:59690156-59690175 | None:intergenic | 30.0% |
| !!! | TTTGAGGTTTTAGGGTTTAA+AGG | + | chr4_4:59690157-59690176 | None:intergenic | 30.0% |
| !!! | CTTTCAGTTTTGAGGTTTTA+GGG | + | chr4_4:59690165-59690184 | None:intergenic | 30.0% |
| !!! | ACTTTCAGTTTTGAGGTTTT+AGG | + | chr4_4:59690166-59690185 | None:intergenic | 30.0% |
| ! | GGATTTTACTTTCAGTTTTG+AGG | + | chr4_4:59690173-59690192 | None:intergenic | 30.0% |
| ! | AAAAATACCGGTGGTAATTT+TGG | + | chr4_4:59690273-59690292 | None:intergenic | 30.0% |
| AGGGTTTCTACAAAAAATAC+CGG | + | chr4_4:59690285-59690304 | None:intergenic | 30.0% | |
| ATTATGATTAAGGCTCTGTT+TGG | - | chr4_4:59690640-59690659 | Msa0691530:intron | 30.0% | |
| ATTGCAGCTTATATATCATG+AGG | - | chr4_4:59690696-59690715 | Msa0691530:intron | 30.0% | |
| AAGTTATCTTGGAGAGTTTA+TGG | - | chr4_4:59690808-59690827 | Msa0691530:intron | 30.0% | |
| ! | GTTTTCATAAGTTATCTTGG+AGG | - | chr4_4:59690841-59690860 | Msa0691530:intron | 30.0% |
| GGGAGAACTTATAAAAAAAG+GGG | + | chr4_4:59691075-59691094 | None:intergenic | 30.0% | |
| ! | TTGTATCGTATCCTTTTGAA+TGG | - | chr4_4:59691164-59691183 | Msa0691530:intron | 30.0% |
| ATCTTGTGTATAAGAAGCTT+GGG | + | chr4_4:59691494-59691513 | None:intergenic | 30.0% | |
| TATCTTGTGTATAAGAAGCT+TGG | + | chr4_4:59691495-59691514 | None:intergenic | 30.0% | |
| ! | GGAAACTTTCTTTGAAAACA+AGG | - | chr4_4:59691558-59691577 | Msa0691530:intron | 30.0% |
| !!! | TTGGTTGTTGTTGTTTTACA+GGG | - | chr4_4:59691748-59691767 | Msa0691530:intron | 30.0% |
| TAACATAATTTAGTACGCAC+GGG | + | chr4_4:59691882-59691901 | None:intergenic | 30.0% | |
| CTTTGAGCTGTAGTAAATAT+TGG | - | chr4_4:59692566-59692585 | Msa0691530:CDS | 30.0% | |
| ACAATGCAAATGATAGCAAA+TGG | - | chr4_4:59692737-59692756 | Msa0691530:CDS | 30.0% | |
| CAATGCAAATGATAGCAAAT+GGG | - | chr4_4:59692738-59692757 | Msa0691530:CDS | 30.0% | |
| !! | TTATCTTTTCCTTGTTTGGT+TGG | - | chr4_4:59692795-59692814 | Msa0691530:intron | 30.0% |
| !!! | TTTTTTTTCTCATGTCGTGA+TGG | - | chr4_4:59692870-59692889 | Msa0691530:intron | 30.0% |
| ATAAAATGGGCAGAAAGTAA+AGG | + | chr4_4:59693224-59693243 | None:intergenic | 30.0% | |
| CATTTGGATGCAAAAGATAA+TGG | + | chr4_4:59693253-59693272 | None:intergenic | 30.0% | |
| AGTGTTCTTCTCAAATGATA+AGG | + | chr4_4:59693297-59693316 | None:intergenic | 30.0% | |
| ! | AAACTGAAGCACTTAATCAA+AGG | - | chr4_4:59693418-59693437 | Msa0691530:intron | 30.0% |
| TTTCTTTGATTCAGAATCAG+AGG | + | chr4_4:59693493-59693512 | None:intergenic | 30.0% | |
| !! | TGATTTTCATTGTTTTCAGG+TGG | - | chr4_4:59694181-59694200 | Msa0691530:intron | 30.0% |
| !!! | CTTCAAATTAGTTTTTACCC+TGG | - | chr4_4:59694317-59694336 | Msa0691530:CDS | 30.0% |
| !!! | GTTTTAGGGTTTAAAGGGAA+TGG | + | chr4_4:59690151-59690170 | None:intergenic | 35.0% |
| AGGTTATATGGCAAGTTATC+AGG | - | chr4_4:59690225-59690244 | Msa0691530:three_prime_UTR | 35.0% | |
| GTTTCTACAAAAAATACCGG+TGG | + | chr4_4:59690282-59690301 | None:intergenic | 35.0% | |
| AAATTCCGGTGACATTGTAA+GGG | + | chr4_4:59690304-59690323 | None:intergenic | 35.0% | |
| TGAACTTCGGTTACAAATTC+CGG | + | chr4_4:59690318-59690337 | None:intergenic | 35.0% | |
| CATAGCGACTATTAGCTAAA+GGG | + | chr4_4:59690343-59690362 | None:intergenic | 35.0% | |
| GTGGAGAAAACTGCATTATT+TGG | - | chr4_4:59690466-59690485 | Msa0691530:intron | 35.0% | |
| !! | TAGACATTTGGTTCTTCATG+TGG | - | chr4_4:59690576-59690595 | Msa0691530:intron | 35.0% |
| !! | AGACATTTGGTTCTTCATGT+GGG | - | chr4_4:59690577-59690596 | Msa0691530:intron | 35.0% |
| ATGTGGGGTAGGTAATAATT+TGG | - | chr4_4:59690593-59690612 | Msa0691530:intron | 35.0% | |
| !!! | CTTACCCTGTTTTTTTACAC+AGG | + | chr4_4:59690975-59690994 | None:intergenic | 35.0% |
| TACAATACACCCAATATGGT+GGG | - | chr4_4:59691001-59691020 | Msa0691530:intron | 35.0% | |
| ! | GATTATTTGAGTTTGTCTGC+TGG | + | chr4_4:59691121-59691140 | None:intergenic | 35.0% |
| ! | CATTTAGGGTCTGTTTAGAT+AGG | + | chr4_4:59691143-59691162 | None:intergenic | 35.0% |
| CTATCTAAACAGACCCTAAA+TGG | - | chr4_4:59691141-59691160 | Msa0691530:CDS | 35.0% | |
| GGATACGATACAACCATTTA+GGG | + | chr4_4:59691157-59691176 | None:intergenic | 35.0% | |
| AGGATACGATACAACCATTT+AGG | + | chr4_4:59691158-59691177 | None:intergenic | 35.0% | |
| ACAATTGCATTGTGTGATGT+AGG | - | chr4_4:59691237-59691256 | Msa0691530:intron | 35.0% | |
| TGAAGTCATTGACAAACATC+TGG | - | chr4_4:59691356-59691375 | Msa0691530:intron | 35.0% | |
| ! | CTTTTATGGAGAAACTGCTA+TGG | + | chr4_4:59691711-59691730 | None:intergenic | 35.0% |
| TAGCAGTTTCTCCATAAAAG+TGG | - | chr4_4:59691711-59691730 | Msa0691530:intron | 35.0% | |
| AACAACCAACATGATCAATC+AGG | + | chr4_4:59691737-59691756 | None:intergenic | 35.0% | |
| !!! | GTTGGTTGTTGTTGTTTTAC+AGG | - | chr4_4:59691747-59691766 | Msa0691530:intron | 35.0% |
| ! | TCTCTCTTAACCTCTTTTCT+TGG | + | chr4_4:59691791-59691810 | None:intergenic | 35.0% |
| GTCTATTGAGAAAGAGCTAT+TGG | - | chr4_4:59691940-59691959 | Msa0691530:intron | 35.0% | |
| TGTTGAAGAAGAGGATGAAA+TGG | - | chr4_4:59692063-59692082 | Msa0691530:intron | 35.0% | |
| ATTGAAGAGGAAACAGAAAC+AGG | - | chr4_4:59692202-59692221 | Msa0691530:intron | 35.0% | |
| TAGAAGCTTTGCAATATGCA+TGG | - | chr4_4:59692336-59692355 | Msa0691530:CDS | 35.0% | |
| ! | GATTCTGGATTAGATATGCA+TGG | - | chr4_4:59692480-59692499 | Msa0691530:intron | 35.0% |
| !! | TTTTCCTTGTTTGGTTGGTT+GGG | - | chr4_4:59692800-59692819 | Msa0691530:intron | 35.0% |
| ! | AGGGAAATTTTGCTAATCAG+AGG | - | chr4_4:59692837-59692856 | Msa0691530:intron | 35.0% |
| ATAAGAATCAAAAGGATCCC+AGG | + | chr4_4:59693037-59693056 | None:intergenic | 35.0% | |
| !!! | TTCTTTTTTGCTTGTTCGGT+TGG | + | chr4_4:59693123-59693142 | None:intergenic | 35.0% |
| ! | ACTCTCCTTGTTAGTGATTT+TGG | - | chr4_4:59693314-59693333 | Msa0691530:intron | 35.0% |
| ATGGCATTTACTAATGCAGA+TGG | - | chr4_4:59693378-59693397 | Msa0691530:intron | 35.0% | |
| ! | GACTTTAGCTTCAAAGAAAC+TGG | - | chr4_4:59693458-59693477 | Msa0691530:intron | 35.0% |
| AGCTTCAAAGAAACTGGAAA+AGG | - | chr4_4:59693464-59693483 | Msa0691530:intron | 35.0% | |
| TTCTGAATCAAAGAAAGCGA+AGG | - | chr4_4:59693497-59693516 | Msa0691530:intron | 35.0% | |
| ! | AACAACTCAACCACTTCTTT+TGG | - | chr4_4:59693626-59693645 | Msa0691530:intron | 35.0% |
| ! | ACAACTCAACCACTTCTTTT+GGG | - | chr4_4:59693627-59693646 | Msa0691530:intron | 35.0% |
| !! | ACCACTTCTTTTGGGAATTT+TGG | - | chr4_4:59693635-59693654 | Msa0691530:intron | 35.0% |
| ACCAAAATTCCCAAAAGAAG+TGG | + | chr4_4:59693639-59693658 | None:intergenic | 35.0% | |
| TAAATGATGCTGCTACAAAC+TGG | - | chr4_4:59693731-59693750 | Msa0691530:intron | 35.0% | |
| TCTCGTGTTCGAAACAATTA+AGG | - | chr4_4:59693963-59693982 | Msa0691530:intron | 35.0% | |
| CTCGTGTTCGAAACAATTAA+GGG | - | chr4_4:59693964-59693983 | Msa0691530:intron | 35.0% | |
| ! | ATCAGATCTCTTTTGTTCCA+GGG | + | chr4_4:59694337-59694356 | None:intergenic | 35.0% |
| ! | AATCAGATCTCTTTTGTTCC+AGG | + | chr4_4:59694338-59694357 | None:intergenic | 35.0% |
| !! | GGTTTTGTATTACGTTCTTC+AGG | - | chr4_4:59694457-59694476 | Msa0691530:five_prime_UTR | 35.0% |
| ! | TTTTGGCCATGTAACTGCAA+TGG | + | chr4_4:59690256-59690275 | None:intergenic | 40.0% |
| TACATGGCCAAAATTACCAC+CGG | - | chr4_4:59690263-59690282 | Msa0691530:three_prime_UTR | 40.0% | |
| AGAAACCCTTACAATGTCAC+CGG | - | chr4_4:59690296-59690315 | Msa0691530:three_prime_UTR | 40.0% | |
| CAAATTCCGGTGACATTGTA+AGG | + | chr4_4:59690305-59690324 | None:intergenic | 40.0% | |
| ! | TAGCTAAAGGGCATGAACTT+CGG | + | chr4_4:59690331-59690350 | None:intergenic | 40.0% |
| GCATAGCGACTATTAGCTAA+AGG | + | chr4_4:59690344-59690363 | None:intergenic | 40.0% | |
| AGTACCATTGTCTTCACGAA+TGG | + | chr4_4:59690369-59690388 | None:intergenic | 40.0% | |
| TATGAAATTCTTGTGGGGTG+TGG | - | chr4_4:59690447-59690466 | Msa0691530:intron | 40.0% | |
| !! | GACATTTGGTTCTTCATGTG+GGG | - | chr4_4:59690578-59690597 | Msa0691530:intron | 40.0% |
| AAGTTATCTTGGAGGGCTTA+TGG | - | chr4_4:59690849-59690868 | Msa0691530:intron | 40.0% | |
| GTTGTTGTCACATCACTGAA+AGG | - | chr4_4:59690921-59690940 | Msa0691530:intron | 40.0% | |
| AGCCTCCTGTGTAAAAAAAC+AGG | - | chr4_4:59690967-59690986 | Msa0691530:intron | 40.0% | |
| GCCTCCTGTGTAAAAAAACA+GGG | - | chr4_4:59690968-59690987 | Msa0691530:intron | 40.0% | |
| !!! | ACCCTGTTTTTTTACACAGG+AGG | + | chr4_4:59690972-59690991 | None:intergenic | 40.0% |
| TGCGTACAATACACCCAATA+TGG | - | chr4_4:59690997-59691016 | Msa0691530:intron | 40.0% | |
| GTACAATACACCCAATATGG+TGG | - | chr4_4:59691000-59691019 | Msa0691530:intron | 40.0% | |
| TTATAAAAAAAGGGGCAGCC+CGG | + | chr4_4:59691067-59691086 | None:intergenic | 40.0% | |
| TCATACGCCAAAGGATTTGT+GGG | - | chr4_4:59691296-59691315 | Msa0691530:intron | 40.0% | |
| ACTCTTTCCCACAAATCCTT+TGG | + | chr4_4:59691306-59691325 | None:intergenic | 40.0% | |
| TACATCTGTCAGTGCAGTAA+AGG | + | chr4_4:59691467-59691486 | None:intergenic | 40.0% | |
| ! | TACTGCACTGACAGATGTAT+TGG | - | chr4_4:59691468-59691487 | Msa0691530:intron | 40.0% |
| TGACCAAAATGACTCAGATG+CGG | - | chr4_4:59691525-59691544 | Msa0691530:intron | 40.0% | |
| ! | TATCCGCATCTGAGTCATTT+TGG | + | chr4_4:59691531-59691550 | None:intergenic | 40.0% |
| !!! | GATCAATCAGGCCACTTTTA+TGG | + | chr4_4:59691725-59691744 | None:intergenic | 40.0% |
| AAAAGCAGCTGTGCTAGAAA+AGG | - | chr4_4:59691835-59691854 | Msa0691530:intron | 40.0% | |
| CTATTGGTACGCCTTCAAAA+CGG | - | chr4_4:59691956-59691975 | Msa0691530:intron | 40.0% | |
| ! | TCTGGTAAAGTCCGTTTTGA+AGG | + | chr4_4:59691970-59691989 | None:intergenic | 40.0% |
| ATCTCAAGCTGTTGAAGAAG+AGG | - | chr4_4:59692054-59692073 | Msa0691530:intron | 40.0% | |
| ! | ACTTGGTAATATGTTGAGCC+TGG | - | chr4_4:59692157-59692176 | Msa0691530:intron | 40.0% |
| ! | TTTTGCAATTCACGAGTCAC+AGG | - | chr4_4:59692276-59692295 | Msa0691530:CDS | 40.0% |
| TTTGCAATTCACGAGTCACA+GGG | - | chr4_4:59692277-59692296 | Msa0691530:CDS | 40.0% | |
| AATGGCAGCGATGATGAAAA+TGG | - | chr4_4:59692301-59692320 | Msa0691530:CDS | 40.0% | |
| GATATGACTGCAGTATCTAG+AGG | + | chr4_4:59692650-59692669 | None:intergenic | 40.0% | |
| !! | CTTTTCCTTGTTTGGTTGGT+TGG | - | chr4_4:59692799-59692818 | Msa0691530:intron | 40.0% |
| ! | TTGGTTGGTTGGGTAGAAAA+CGG | - | chr4_4:59692810-59692829 | Msa0691530:intron | 40.0% |
| ! | TTTTTCTCATGTCGTGATGG+AGG | - | chr4_4:59692873-59692892 | Msa0691530:intron | 40.0% |
| !! | TTTTCTCATGTCGTGATGGA+GGG | - | chr4_4:59692874-59692893 | Msa0691530:intron | 40.0% |
| ATGGAGGGACGAAATATCAA+GGG | - | chr4_4:59692889-59692908 | Msa0691530:intron | 40.0% | |
| AGTTGTCTCTTCACTTGAGA+GGG | + | chr4_4:59692948-59692967 | None:intergenic | 40.0% | |
| TAGTTGTCTCTTCACTTGAG+AGG | + | chr4_4:59692949-59692968 | None:intergenic | 40.0% | |
| CATCCAAATGAGACATATGC+TGG | - | chr4_4:59693263-59693282 | Msa0691530:CDS | 40.0% | |
| GTGACTGCTTGAGTTCTATA+TGG | - | chr4_4:59694041-59694060 | Msa0691530:intron | 40.0% | |
| AAGGGAATGGTTTCGATGCA+GGG | + | chr4_4:59690138-59690157 | None:intergenic | 45.0% | |
| AAAGGGAATGGTTTCGATGC+AGG | + | chr4_4:59690139-59690158 | None:intergenic | 45.0% | |
| TGCAGCACGATGAGGTTATA+TGG | - | chr4_4:59690213-59690232 | Msa0691530:three_prime_UTR | 45.0% | |
| GCACAACCATTGCAGTTACA+TGG | - | chr4_4:59690247-59690266 | Msa0691530:three_prime_UTR | 45.0% | |
| ACCATTGTCTTCACGAATGG+TGG | + | chr4_4:59690366-59690385 | None:intergenic | 45.0% | |
| !! | TTTGGTTCTTCATGTGGGGT+AGG | - | chr4_4:59690582-59690601 | Msa0691530:intron | 45.0% |
| TGTAAATTCTCCCAACGCCT+TGG | - | chr4_4:59690886-59690905 | Msa0691530:intron | 45.0% | |
| AAGGTCACACGTTCAAGTCT+TGG | - | chr4_4:59690940-59690959 | Msa0691530:intron | 45.0% | |
| ! | TGGCATAAGCACTTCTGAGA+CGG | + | chr4_4:59691101-59691120 | None:intergenic | 45.0% |
| TGAAAGAGCTCATACGCCAA+AGG | - | chr4_4:59691287-59691306 | Msa0691530:intron | 45.0% | |
| CTCATACGCCAAAGGATTTG+TGG | - | chr4_4:59691295-59691314 | Msa0691530:intron | 45.0% | |
| AGTGGCCTGATTGATCATGT+TGG | - | chr4_4:59691729-59691748 | Msa0691530:intron | 45.0% | |
| AACGACACTGCCAAGAAAAG+AGG | - | chr4_4:59691778-59691797 | Msa0691530:intron | 45.0% | |
| TAGTACGCACGGGTAACATT+CGG | + | chr4_4:59691872-59691891 | None:intergenic | 45.0% | |
| ! | CAAAACGGACTTTACCAGAC+AGG | - | chr4_4:59691971-59691990 | Msa0691530:intron | 45.0% |
| TGCATATATCACCTCCTGTC+TGG | + | chr4_4:59691988-59692007 | None:intergenic | 45.0% | |
| ATTCACGAGTCACAGGGAAA+TGG | - | chr4_4:59692283-59692302 | Msa0691530:CDS | 45.0% | |
| TCTACCCAACCAACCAAACA+AGG | + | chr4_4:59692807-59692826 | None:intergenic | 45.0% | |
| ! | TGGTTGGTTGGGTAGAAAAC+GGG | - | chr4_4:59692811-59692830 | Msa0691530:intron | 45.0% |
| TTGGGTAGAAAACGGGAGAA+GGG | - | chr4_4:59692818-59692837 | Msa0691530:intron | 45.0% | |
| GATGGAGGGACGAAATATCA+AGG | - | chr4_4:59692888-59692907 | Msa0691530:intron | 45.0% | |
| TGGAGGGACGAAATATCAAG+GGG | - | chr4_4:59692890-59692909 | Msa0691530:intron | 45.0% | |
| CAAGGGGGAGAAATAATGTG+AGG | - | chr4_4:59692906-59692925 | Msa0691530:intron | 45.0% | |
| CCTCCAGCATATGTCTCATT+TGG | + | chr4_4:59693269-59693288 | None:intergenic | 45.0% | |
| CCAAATGAGACATATGCTGG+AGG | - | chr4_4:59693266-59693285 | Msa0691530:CDS | 45.0% | |
| AATGAGACATATGCTGGAGG+CGG | - | chr4_4:59693269-59693288 | Msa0691530:CDS | 45.0% | |
| AGAACGGATCGCTTTATACG+AGG | + | chr4_4:59693551-59693570 | None:intergenic | 45.0% | |
| AGGTCAGCATGCAAAAATGG+AGG | + | chr4_4:59693843-59693862 | None:intergenic | 45.0% | |
| GTGAGGTCAGCATGCAAAAA+TGG | + | chr4_4:59693846-59693865 | None:intergenic | 45.0% | |
| !! | AAGTCGTAGGTAGCTTTGTG+AGG | + | chr4_4:59693863-59693882 | None:intergenic | 45.0% |
| GCAAGACAAAGAGAAGTCGT+AGG | + | chr4_4:59693876-59693895 | None:intergenic | 45.0% | |
| CGACTTCTCTTTGTCTTGCT+TGG | - | chr4_4:59693877-59693896 | Msa0691530:intron | 45.0% | |
| GTTTGAAAGGAAGCCAGTGT+TGG | - | chr4_4:59694403-59694422 | Msa0691530:five_prime_UTR | 45.0% | |
| CACAAAGATGCAGCACGATG+AGG | - | chr4_4:59690205-59690224 | Msa0691530:three_prime_UTR | 50.0% | |
| GCCACCATTCGTGAAGACAA+TGG | - | chr4_4:59690362-59690381 | Msa0691530:intron | 50.0% | |
| ACAACTTTCCCGTTACGCCA+AGG | + | chr4_4:59690906-59690925 | None:intergenic | 50.0% | |
| AGAAGGGGTCCCACCATATT+GGG | + | chr4_4:59691013-59691032 | None:intergenic | 50.0% | |
| ! | AATATGGTGGGACCCCTTCT+CGG | - | chr4_4:59691013-59691032 | Msa0691530:intron | 50.0% |
| !! | AAGCACTTCTGAGACGGGTT+GGG | + | chr4_4:59691095-59691114 | None:intergenic | 50.0% |
| !! | TAAGCACTTCTGAGACGGGT+TGG | + | chr4_4:59691096-59691115 | None:intergenic | 50.0% |
| !! | GGCATAAGCACTTCTGAGAC+GGG | + | chr4_4:59691100-59691119 | None:intergenic | 50.0% |
| GGGAAAGAGTTAAGCTGCCT+AGG | - | chr4_4:59691316-59691335 | Msa0691530:intron | 50.0% | |
| AGTGCCTGCTGGTAATTCCT+AGG | + | chr4_4:59691336-59691355 | None:intergenic | 50.0% | |
| CAATGACTTCAAGTGCCTGC+TGG | + | chr4_4:59691347-59691366 | None:intergenic | 50.0% | |
| CTGTCAGTGCAGTAAAGGTC+AGG | + | chr4_4:59691462-59691481 | None:intergenic | 50.0% | |
| CTCAGATGCGGATACGTATG+AGG | - | chr4_4:59691537-59691556 | Msa0691530:intron | 50.0% | |
| ! | AACGGACTTTACCAGACAGG+AGG | - | chr4_4:59691974-59691993 | Msa0691530:intron | 50.0% |
| GTTGGGTAGAAAACGGGAGA+AGG | - | chr4_4:59692817-59692836 | Msa0691530:intron | 50.0% | |
| GGAGGGACGAAATATCAAGG+GGG | - | chr4_4:59692891-59692910 | Msa0691530:intron | 50.0% | |
| TTTACCTCGCTCATCTAGCC+TGG | - | chr4_4:59693016-59693035 | Msa0691530:CDS | 50.0% | |
| TTACCTCGCTCATCTAGCCT+GGG | - | chr4_4:59693017-59693036 | Msa0691530:CDS | 50.0% | |
| ATGAGACATATGCTGGAGGC+GGG | - | chr4_4:59693270-59693289 | Msa0691530:CDS | 50.0% | |
| GAAAGCGAAGGTCCTCATTG+AGG | - | chr4_4:59693509-59693528 | Msa0691530:intron | 50.0% | |
| AACACGACGATGCTGTCGAA+AGG | - | chr4_4:59694204-59694223 | Msa0691530:CDS | 50.0% | |
| TGCTGTCGAAAGGCAAAGAG+CGG | - | chr4_4:59694214-59694233 | Msa0691530:CDS | 50.0% | |
| GAGAAGGGGTCCCACCATAT+TGG | + | chr4_4:59691014-59691033 | None:intergenic | 55.0% | |
| ! | ACGCAGGAGCTTTAGTGCAC+CGG | - | chr4_4:59691045-59691064 | Msa0691530:CDS | 55.0% |
| GCTGCCTAGGAATTACCAGC+AGG | - | chr4_4:59691329-59691348 | Msa0691530:intron | 55.0% | |
| CTCCCAACGCCTTGGCGTAA+CGG | - | chr4_4:59690894-59690913 | Msa0691530:intron | 60.0% | |
| TCCCAACGCCTTGGCGTAAC+GGG | - | chr4_4:59690895-59690914 | Msa0691530:intron | 60.0% | |
| ! | TCCCGTTACGCCAAGGCGTT+GGG | + | chr4_4:59690899-59690918 | None:intergenic | 60.0% |
| TTCCCGTTACGCCAAGGCGT+TGG | + | chr4_4:59690900-59690919 | None:intergenic | 60.0% | |
| CGTGTGCAGAGTCCGAGAAG+GGG | + | chr4_4:59691028-59691047 | None:intergenic | 60.0% | |
| GCGTGTGCAGAGTCCGAGAA+GGG | + | chr4_4:59691029-59691048 | None:intergenic | 60.0% | |
| TGCGTGTGCAGAGTCCGAGA+AGG | + | chr4_4:59691030-59691049 | None:intergenic | 60.0% | |
| TTCTCGGACTCTGCACACGC+AGG | - | chr4_4:59691029-59691048 | Msa0691530:intron | 60.0% | |
| ! | CGCAGGAGCTTTAGTGCACC+GGG | - | chr4_4:59691046-59691065 | Msa0691530:CDS | 60.0% |
| GATCCCAGGCTAGATGAGCG+AGG | + | chr4_4:59693023-59693042 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 59690090 | 59694480 | 59690090 | ID=Msa0691530;Name=Msa0691530 |
| chr4_4 | mRNA | 59690090 | 59694480 | 59690090 | ID=Msa0691530-mRNA-1;Parent=Msa0691530;Name=Msa0691530-mRNA-1;_AED=0.08;_eAED=0.08;_QI=122|1|1|1|1|1|8|236|306 |
| chr4_4 | exon | 59690090 | 59690370 | 59690090 | ID=Msa0691530-mRNA-1:exon:16300;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59691040 | 59691173 | 59691040 | ID=Msa0691530-mRNA-1:exon:16299;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59692248 | 59692368 | 59692248 | ID=Msa0691530-mRNA-1:exon:16298;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59692486 | 59692629 | 59692486 | ID=Msa0691530-mRNA-1:exon:16297;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59692714 | 59692801 | 59692714 | ID=Msa0691530-mRNA-1:exon:16296;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59692991 | 59693088 | 59692991 | ID=Msa0691530-mRNA-1:exon:16295;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59693193 | 59693311 | 59693193 | ID=Msa0691530-mRNA-1:exon:16294;Parent=Msa0691530-mRNA-1 |
| chr4_4 | exon | 59694187 | 59694480 | 59694187 | ID=Msa0691530-mRNA-1:exon:16293;Parent=Msa0691530-mRNA-1 |
| chr4_4 | five_prime_UTR | 59694359 | 59694480 | 59694359 | ID=Msa0691530-mRNA-1:five_prime_utr;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59694187 | 59694358 | 59694187 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59693193 | 59693311 | 59693193 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59692991 | 59693088 | 59692991 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59692714 | 59692801 | 59692714 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59692486 | 59692629 | 59692486 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59692248 | 59692368 | 59692248 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59691040 | 59691173 | 59691040 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | CDS | 59690326 | 59690370 | 59690326 | ID=Msa0691530-mRNA-1:cds;Parent=Msa0691530-mRNA-1 |
| chr4_4 | three_prime_UTR | 59690090 | 59690325 | 59690090 | ID=Msa0691530-mRNA-1:three_prime_utr;Parent=Msa0691530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
