AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0876810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0876810 MtrunA17_Chr6g0458071 96.109 257 8 1 1 255 1 257 0.0 511
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0876810 AT3G56510.2 57.674 215 78 2 52 254 43 256 6.81e-86 256
Msa0876810 AT3G56510.5 57.674 215 78 2 52 254 43 256 6.81e-86 256
Msa0876810 AT3G56510.3 57.674 215 78 2 52 254 43 256 6.81e-86 256
Msa0876810 AT3G56510.1 57.674 215 78 2 52 254 43 256 6.81e-86 256
Msa0876810 AT3G56510.4 57.674 215 78 2 52 254 43 256 6.81e-86 256

Find 82 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTGGCAACACATTTAT+TGG 0.115118 6_1:-15200613 None:intergenic
GAGAGAAGAGGATTTGAATT+AGG 0.118268 6_1:-15198696 None:intergenic
TTGTTCACCATTTATGTTAT+AGG 0.161696 6_1:-15200640 None:intergenic
GTTGCCGGAGATTGGGGTTT+AGG 0.218530 6_1:-15198729 None:intergenic
CTTCTGAATAAGATTGGTTT+TGG 0.220354 6_1:-15200445 None:intergenic
ATAGAAATCTCTCTCTTTCT+TGG 0.237380 6_1:-15201440 None:intergenic
TATTGATTGATCTTCCAATA+TGG 0.239686 6_1:+15203547 Msa0876810:three_prime_UTR
TTCGAATTCGGAACCGGAAT+TGG 0.241855 6_1:+15198912 Msa0876810:CDS
GTATTTATTCATTTGAATTC+AGG 0.246483 6_1:+15203587 Msa0876810:three_prime_UTR
AGAGAAGAGGATTTGAATTA+GGG 0.249470 6_1:-15198695 None:intergenic
CTATGACCCTTGCAGGTATT+TGG 0.250217 6_1:+15203508 Msa0876810:intron
ATAATCAAATAACATTATAT+TGG 0.279653 6_1:-15203785 None:intergenic
CGTCAACTTCTTTCGCAATT+CGG 0.290450 6_1:+15199072 Msa0876810:CDS
CTCCCGAGTAGCTCTCTTAA+AGG 0.293569 6_1:-15201389 None:intergenic
CGGTGGTGTTGCCGGAGATT+GGG 0.295844 6_1:-15198736 None:intergenic
TCAGTTTCCGATTCCAATTC+CGG 0.302228 6_1:-15198925 None:intergenic
TTGCCGGAGATTGGGGTTTA+GGG 0.306489 6_1:-15198728 None:intergenic
GCGGTGGTGTTGCCGGAGAT+TGG 0.307571 6_1:-15198737 None:intergenic
GATGAAGAAGAAACTGAAAA+TGG 0.309717 6_1:+15198975 Msa0876810:CDS
CATCTTTCCACTATGACCTT+TGG 0.342853 6_1:+15201233 Msa0876810:CDS
AACATAAATGGTGAACAAAT+AGG 0.354948 6_1:+15200645 Msa0876810:CDS
ATTCTAGACAACAATAGATT+TGG 0.359052 6_1:-15203746 None:intergenic
GAGTCGAATTCCTCCTCATA+TGG 0.364489 6_1:+15199035 Msa0876810:CDS
ATCACCCTTCTGAATAAGAT+TGG 0.375139 6_1:-15200451 None:intergenic
CAGCTATAGGCTTTGTTTGA+GGG 0.381118 6_1:-15203337 None:intergenic
TTGTGCGGCGGTGGTGTTGC+CGG 0.405360 6_1:-15198744 None:intergenic
GAGATTGGGGTTTAGGGTTG+AGG 0.409710 6_1:-15198722 None:intergenic
AGGGTTGCCTATAACATAAA+TGG 0.414330 6_1:+15200633 Msa0876810:CDS
TTAGCATTAGCAGCAGCTAT+AGG 0.414591 6_1:-15203350 None:intergenic
TGAAAATTCGAATTCGGAAC+CGG 0.417888 6_1:+15198906 Msa0876810:CDS
GAATGATGAAAATTCGAATT+CGG 0.431044 6_1:+15198900 Msa0876810:CDS
CGCAATTCGGTGATATTGAA+AGG 0.440698 6_1:+15199085 Msa0876810:CDS
GCAGCTATAGGCTTTGTTTG+AGG 0.446945 6_1:-15203338 None:intergenic
AAGTAATCTGTATACAAAAC+AGG 0.458973 6_1:+15203628 Msa0876810:three_prime_UTR
AAACAGGCAATAATGTCAAA+TGG 0.467273 6_1:+15203644 Msa0876810:three_prime_UTR
GAGTGCAATCTAAGCGAGCC+CGG 0.473835 6_1:+15200417 Msa0876810:CDS
AGTACGCGACTGGTCAACTT+TGG 0.475875 6_1:-15201467 None:intergenic
ATTGATTGATCTTCCAATAT+GGG 0.476351 6_1:+15203548 Msa0876810:three_prime_UTR
AAGGTAGCATCACCCCATAT+TGG 0.484344 6_1:-15203561 None:intergenic
TGACCCTTGCAGGTATTTGG+CGG 0.486470 6_1:+15203511 Msa0876810:intron
TAGAAGATCATCTGACAGTT+CGG 0.489089 6_1:-15203384 None:intergenic
TTCGGAACCGGAATTGGAAT+CGG 0.490595 6_1:+15198918 Msa0876810:CDS
TGAAGAGGAGAATGCGGCGC+TGG 0.497542 6_1:-15198787 None:intergenic
CAACCCTAAACCCCAATCTC+CGG 0.504209 6_1:+15198725 Msa0876810:five_prime_UTR
GGGTTGAGGAGTGAGAGAAG+AGG 0.509291 6_1:-15198708 None:intergenic
CAAAACCAATCTTATTCAGA+AGG 0.513122 6_1:+15200446 Msa0876810:CDS
CAATAAATGTGTTGCCAAGA+GGG 0.521284 6_1:+15200614 Msa0876810:CDS
TATGTTATAGGCAACCCTCT+TGG 0.529763 6_1:-15200628 None:intergenic
GGAGAATGCGGCGCTGGAGA+AGG 0.535155 6_1:-15198781 None:intergenic
GGTGGTGTTGCCGGAGATTG+GGG 0.535880 6_1:-15198735 None:intergenic
CAGCCTTTAAGAGAGCTACT+CGG 0.537546 6_1:+15201386 Msa0876810:intron
ATTGGAATCGGAAACTGAGA+TGG 0.540134 6_1:+15198930 Msa0876810:CDS
AGCCTTTAAGAGAGCTACTC+GGG 0.541936 6_1:+15201387 Msa0876810:intron
AGTGCAATCTAAGCGAGCCC+GGG 0.552088 6_1:+15200418 Msa0876810:CDS
AGCTTAACATGATCCATATG+AGG 0.555099 6_1:-15199048 None:intergenic
TAATATTCCAAAGGTCATAG+TGG 0.556585 6_1:-15201240 None:intergenic
AACACGTGGAAAGAGTGGTT+CGG 0.563570 6_1:+15203309 Msa0876810:CDS
AGTACTTAAGCAAGTTCAAG+TGG 0.565506 6_1:+15201263 Msa0876810:CDS
TCAAATGAATAAATACATCA+AGG 0.570617 6_1:-15203580 None:intergenic
ACGGTGGAATTGTGCGGCGG+TGG 0.571405 6_1:-15198753 None:intergenic
AGGATTTATCTCGCTCCTCA+AGG 0.574764 6_1:+15199105 Msa0876810:CDS
TATAGATGAGAGGTTAAAGA+AGG 0.576388 6_1:+15201498 Msa0876810:CDS
TTAAGTACTTAATATTCCAA+AGG 0.580883 6_1:-15201249 None:intergenic
AAAACCAATCTTATTCAGAA+GGG 0.593711 6_1:+15200447 Msa0876810:CDS
TAGCGTTCAAAGTACGCGAC+TGG 0.594885 6_1:-15201477 None:intergenic
GGTTCAACACGTGGAAAGAG+TGG 0.597276 6_1:+15203304 Msa0876810:CDS
CCAATAAATGTGTTGCCAAG+AGG 0.600706 6_1:+15200613 Msa0876810:CDS
GCTGGAGAAGGTTGCGACGG+TGG 0.611964 6_1:-15198769 None:intergenic
TCGCCTTGCACAGAAGCAGA+AGG 0.613936 6_1:+15203283 Msa0876810:intron
CTTTGAACGCTATAGATGAG+AGG 0.616917 6_1:+15201488 Msa0876810:CDS
GGCTCGCTTAGATTGCACTC+TGG 0.621627 6_1:-15200414 None:intergenic
GATGATCTAACTGAAGAACT+AGG 0.628548 6_1:+15201286 Msa0876810:CDS
GGCGCTGGAGAAGGTTGCGA+CGG 0.635475 6_1:-15198772 None:intergenic
TTTGGTTGAAGAGGAGAATG+CGG 0.636426 6_1:-15198793 None:intergenic
GCGAAGAAAGCTAATATGCG+TGG 0.650560 6_1:+15199000 Msa0876810:CDS
GTTGCGACGGTGGAATTGTG+CGG 0.651840 6_1:-15198759 None:intergenic
GCGACGGTGGAATTGTGCGG+CGG 0.653893 6_1:-15198756 None:intergenic
TTGATTGATCTTCCAATATG+GGG 0.663468 6_1:+15203549 Msa0876810:three_prime_UTR
GTACTTAAGCAAGTTCAAGT+GGG 0.663871 6_1:+15201264 Msa0876810:CDS
TTAACATGATCCATATGAGG+AGG 0.667619 6_1:-15199045 None:intergenic
GAAGCAGAAGGTTCAACACG+TGG 0.694670 6_1:+15203295 Msa0876810:intron
GTAACAGAACATGGAAAACG+AGG 0.694921 6_1:-15203691 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAACAATAAATTCAA+AGG - chr6_1:15199226-15199245 None:intergenic 10.0%
!! ATAAAACTATATTAATATAG+TGG + chr6_1:15200212-15200231 Msa0876810:intron 10.0%
!!! ATTTTAAACATCAAATAAAT+AGG + chr6_1:15200850-15200869 Msa0876810:intron 10.0%
!!! TTTCATTTAGTTATAAATTT+TGG - chr6_1:15201544-15201563 None:intergenic 10.0%
!! ATGTATTAAATTAAGAATAT+TGG + chr6_1:15202682-15202701 Msa0876810:intron 10.0%
!! TGTATTAAATTAAGAATATT+GGG + chr6_1:15202683-15202702 Msa0876810:intron 10.0%
!! ATAATCAAATAACATTATAT+TGG - chr6_1:15203788-15203807 None:intergenic 10.0%
!!! TGTATTTTAGTTTAACAAAT+AGG + chr6_1:15199503-15199522 Msa0876810:intron 15.0%
!!! AATATAGTTTTATTTTCCAT+TGG - chr6_1:15200205-15200224 None:intergenic 15.0%
!! GAAATGATCTTATTAAATAT+TGG + chr6_1:15200242-15200261 Msa0876810:intron 15.0%
!!! TTAAATGTTTAATTTGATCT+TGG + chr6_1:15200486-15200505 Msa0876810:intron 15.0%
!! TATATTATGTGGAAAAAAAA+TGG + chr6_1:15200929-15200948 Msa0876810:intron 15.0%
!!! AATAAAAATAATTCTAGAGT+TGG - chr6_1:15201064-15201083 None:intergenic 15.0%
!! TCAAATGATAAAATAAAGAT+AGG - chr6_1:15201701-15201720 None:intergenic 15.0%
!!! TTATTTTATCATTTGAATGA+AGG + chr6_1:15201705-15201724 Msa0876810:intron 15.0%
!!! TTTTCTGTAAAAAAAAAAGA+AGG + chr6_1:15201732-15201751 Msa0876810:intron 15.0%
!! TGACATATTTACAAAATTAA+AGG - chr6_1:15203447-15203466 None:intergenic 15.0%
!! TATTAGTTGTTAAGCTATAT+TGG + chr6_1:15199288-15199307 Msa0876810:intron 20.0%
!! AAATAGAATCAGAAAATTTG+TGG + chr6_1:15199378-15199397 Msa0876810:intron 20.0%
!! CAAAAAATCTATTCAACAAA+TGG - chr6_1:15199724-15199743 None:intergenic 20.0%
!!! CTAATTTTATAAACTTCCTA+TGG - chr6_1:15200025-15200044 None:intergenic 20.0%
!!! TTTGACTTTTAATTCTTACA+TGG + chr6_1:15200735-15200754 Msa0876810:intron 20.0%
!!! TTTTAATTCTTACATGGAAA+TGG + chr6_1:15200741-15200760 Msa0876810:intron 20.0%
!!! ATTAGTAATTGATAATGTGT+TGG + chr6_1:15200825-15200844 Msa0876810:intron 20.0%
!!! AATTCTATTTTGTTTACCTA+GGG + chr6_1:15201197-15201216 Msa0876810:intron 20.0%
!! TTAAGTACTTAATATTCCAA+AGG - chr6_1:15201252-15201271 None:intergenic 20.0%
!! ATTTGTCGATAAATAAAATC+AGG - chr6_1:15201332-15201351 None:intergenic 20.0%
!!! GATTTTATTTATCGACAAAT+AGG + chr6_1:15201332-15201351 Msa0876810:intron 20.0%
!!! CACAATGTTATTTTCTTAAT+GGG - chr6_1:15201603-15201622 None:intergenic 20.0%
!!! TCACAATGTTATTTTCTTAA+TGG - chr6_1:15201604-15201623 None:intergenic 20.0%
!! AAGAAAATAACATTGTGATT+AGG + chr6_1:15201606-15201625 Msa0876810:intron 20.0%
!!! AAGTTTTTGAAAGTTTGTTT+AGG + chr6_1:15201940-15201959 Msa0876810:intron 20.0%
!! TTCATTCTGTAAAAATGATA+AGG + chr6_1:15202314-15202333 Msa0876810:intron 20.0%
!!! ATTGTTTTCAAATATGGTTT+CGG + chr6_1:15202341-15202360 Msa0876810:intron 20.0%
!!! TATCAACAATTTTCATTGTT+AGG - chr6_1:15202628-15202647 None:intergenic 20.0%
!! TAAATTAAGAATATTGGGTT+TGG + chr6_1:15202688-15202707 Msa0876810:intron 20.0%
!! TCAAATGAATAAATACATCA+AGG - chr6_1:15203583-15203602 None:intergenic 20.0%
!! GTATTTATTCATTTGAATTC+AGG + chr6_1:15203587-15203606 Msa0876810:three_prime_UTR 20.0%
!!! ATAGTTCTGATGTGTTTTTT+TGG - chr6_1:15198814-15198833 None:intergenic 25.0%
! ATCAACAAAAATGAAAGTTC+CGG + chr6_1:15198837-15198856 Msa0876810:exon 25.0%
! GAATGATGAAAATTCGAATT+CGG + chr6_1:15198900-15198919 Msa0876810:CDS 25.0%
! TTGTAGCTAGAGATAAAATA+AGG + chr6_1:15199244-15199263 Msa0876810:intron 25.0%
! ATTGGAGAACAATGAAAATA+AGG + chr6_1:15199306-15199325 Msa0876810:intron 25.0%
! TTCAGTGTAATTATATGTGT+TGG + chr6_1:15199633-15199652 Msa0876810:intron 25.0%
! AATCACTTAATCTCATAATC+AGG + chr6_1:15199908-15199927 Msa0876810:intron 25.0%
! ATCACTTAATCTCATAATCA+GGG + chr6_1:15199909-15199928 Msa0876810:intron 25.0%
!! TTTCTTTATATTTGAAACCG+TGG + chr6_1:15200275-15200294 Msa0876810:intron 25.0%
!!! AAAAGTACTCATTTATTCCA+CGG - chr6_1:15200295-15200314 None:intergenic 25.0%
!!! TTCTGAATAAGATTGGTTTT+GGG - chr6_1:15200447-15200466 None:intergenic 25.0%
! AAAACCAATCTTATTCAGAA+GGG + chr6_1:15200447-15200466 Msa0876810:CDS 25.0%
!!! GTTTAATTTGATCTTGGAAT+TGG + chr6_1:15200492-15200511 Msa0876810:intron 25.0%
! GATCAGTATCTAATTTAAGT+TGG + chr6_1:15200519-15200538 Msa0876810:intron 25.0%
! TTGTTCACCATTTATGTTAT+AGG - chr6_1:15200643-15200662 None:intergenic 25.0%
! AACATAAATGGTGAACAAAT+AGG + chr6_1:15200645-15200664 Msa0876810:CDS 25.0%
! TTGTAAATTAGCTGAAGATA+AGG + chr6_1:15200790-15200809 Msa0876810:intron 25.0%
! TTTCTTATTGTAAATGACTC+TGG + chr6_1:15200887-15200906 Msa0876810:intron 25.0%
!! GATTACTTTGCTATATTATG+TGG + chr6_1:15200918-15200937 Msa0876810:intron 25.0%
!! CTTTTCTGTTTGCAATAATT+TGG + chr6_1:15201159-15201178 Msa0876810:intron 25.0%
!!! GAATTCTATTTTGTTTACCT+AGG + chr6_1:15201196-15201215 Msa0876810:intron 25.0%
!!! ATTCTATTTTGTTTACCTAG+GGG + chr6_1:15201198-15201217 Msa0876810:intron 25.0%
!! TAGATTTGTCCTTTAAGAAT+CGG - chr6_1:15202143-15202162 None:intergenic 25.0%
!!! TCATTTTTACAGAATGAATC+TGG - chr6_1:15202312-15202331 None:intergenic 25.0%
!! GGCAAAATTGTTTTCAAATA+TGG + chr6_1:15202335-15202354 Msa0876810:intron 25.0%
! TAATGAGTTCTATCCAAATA+TGG + chr6_1:15202386-15202405 Msa0876810:intron 25.0%
! TACATTGAAGTTCTCAAAAT+TGG - chr6_1:15202667-15202686 None:intergenic 25.0%
!!! TATGAGTTTTATTCCCTTTT+TGG + chr6_1:15202794-15202813 Msa0876810:intron 25.0%
!!! ATGAGTTTTATTCCCTTTTT+GGG + chr6_1:15202795-15202814 Msa0876810:intron 25.0%
!!! TTTCTGATTCCTCTTTATTT+TGG + chr6_1:15202915-15202934 Msa0876810:intron 25.0%
!!! TTCTGATTCCTCTTTATTTT+GGG + chr6_1:15202916-15202935 Msa0876810:intron 25.0%
! AAGATATTAAGAACTTAGAG+TGG - chr6_1:15202944-15202963 None:intergenic 25.0%
! AATGAGTAGTATGTATATTG+AGG + chr6_1:15203249-15203268 Msa0876810:intron 25.0%
!! TATTGATTGATCTTCCAATA+TGG + chr6_1:15203547-15203566 Msa0876810:three_prime_UTR 25.0%
! ATTGATTGATCTTCCAATAT+GGG + chr6_1:15203548-15203567 Msa0876810:three_prime_UTR 25.0%
!!! TTGAATTCAGGTTTTAAAAC+TGG + chr6_1:15203599-15203618 Msa0876810:three_prime_UTR 25.0%
! AAGTAATCTGTATACAAAAC+AGG + chr6_1:15203628-15203647 Msa0876810:three_prime_UTR 25.0%
!! AATGGAGTTGAATTTTGAAT+TGG + chr6_1:15203662-15203681 Msa0876810:three_prime_UTR 25.0%
!! TAACATTTTGTAACAGAACA+TGG - chr6_1:15203703-15203722 None:intergenic 25.0%
! ATTCTAGACAACAATAGATT+TGG - chr6_1:15203749-15203768 None:intergenic 25.0%
AGAGAAGAGGATTTGAATTA+GGG - chr6_1:15198698-15198717 None:intergenic 30.0%
!!! ATGTGTTTTTTTGGTTGAAG+AGG - chr6_1:15198805-15198824 None:intergenic 30.0%
GATGAAGAAGAAACTGAAAA+TGG + chr6_1:15198975-15198994 Msa0876810:CDS 30.0%
AATAAGGTGAAAACAGCTTA+TGG + chr6_1:15199322-15199341 Msa0876810:intron 30.0%
ATAAGGTGAAAACAGCTTAT+GGG + chr6_1:15199323-15199342 Msa0876810:intron 30.0%
! GTGATTTTCTCAAATTGTGT+TGG - chr6_1:15199609-15199628 None:intergenic 30.0%
! GTAATTATATGTGTTGGTGT+CGG + chr6_1:15199639-15199658 Msa0876810:intron 30.0%
TTATCATATCCTATGAAGCA+CGG - chr6_1:15199695-15199714 None:intergenic 30.0%
ATACAACATAGTACTCACTT+GGG + chr6_1:15199751-15199770 Msa0876810:intron 30.0%
AAGTATCTAAGCTCATACTT+CGG + chr6_1:15199790-15199809 Msa0876810:intron 30.0%
!! ATAAGTTGATTATCCAAGCA+TGG + chr6_1:15200060-15200079 Msa0876810:intron 30.0%
TTTCTTGATAAAACCATGCT+TGG - chr6_1:15200076-15200095 None:intergenic 30.0%
ATCAGATAAAGAAGATTAGC+TGG - chr6_1:15200110-15200129 None:intergenic 30.0%
ATATATCACTCTCTATTGTC+TGG - chr6_1:15200329-15200348 None:intergenic 30.0%
GAGAGTGATATATTACTACT+TGG + chr6_1:15200336-15200355 Msa0876810:intron 30.0%
!! TACTTGGTTAGTTCTAAAGT+TGG + chr6_1:15200352-15200371 Msa0876810:intron 30.0%
!!! CTTCTGAATAAGATTGGTTT+TGG - chr6_1:15200448-15200467 None:intergenic 30.0%
CAAAACCAATCTTATTCAGA+AGG + chr6_1:15200446-15200465 Msa0876810:CDS 30.0%
ATTTGATCTTGGAATTGGAT+TGG + chr6_1:15200497-15200516 Msa0876810:intron 30.0%
TATTGTAAATGACTCTGGTA+TGG + chr6_1:15200892-15200911 Msa0876810:intron 30.0%
!! TTCTATTTTGTTTACCTAGG+GGG + chr6_1:15201199-15201218 Msa0876810:intron 30.0%
TAATATTCCAAAGGTCATAG+TGG - chr6_1:15201243-15201262 None:intergenic 30.0%
CGATAAATAAAATCAGGAAC+TGG - chr6_1:15201326-15201345 None:intergenic 30.0%
ATAGAAATCTCTCTCTTTCT+TGG - chr6_1:15201443-15201462 None:intergenic 30.0%
TATAGATGAGAGGTTAAAGA+AGG + chr6_1:15201498-15201517 Msa0876810:CDS 30.0%
GCTGAAATTGAATTAAGTCA+TGG - chr6_1:15201575-15201594 None:intergenic 30.0%
TAGAAGATAGTAGAAGTAGA+AGG + chr6_1:15201826-15201845 Msa0876810:intron 30.0%
! TAGCACTTTCCTTGATTTTA+CGG + chr6_1:15201868-15201887 Msa0876810:intron 30.0%
CAGAATATTCCGTAAAATCA+AGG - chr6_1:15201880-15201899 None:intergenic 30.0%
ACGGAATATTCTGTTAGAAA+AGG + chr6_1:15201887-15201906 Msa0876810:intron 30.0%
CGGAATATTCTGTTAGAAAA+GGG + chr6_1:15201888-15201907 Msa0876810:intron 30.0%
AATATTCTGTTAGAAAAGGG+AGG + chr6_1:15201891-15201910 Msa0876810:intron 30.0%
ATATTCTGTTAGAAAAGGGA+GGG + chr6_1:15201892-15201911 Msa0876810:intron 30.0%
! CAGTTCGTTTCTTGATTTTT+CGG + chr6_1:15202098-15202117 Msa0876810:intron 30.0%
! AGTTCGTTTCTTGATTTTTC+GGG + chr6_1:15202099-15202118 Msa0876810:intron 30.0%
!!! GTTTCCTTTTGGTTTTCATA+TGG + chr6_1:15202208-15202227 Msa0876810:intron 30.0%
GCAGTAAAAACACTATCATA+TGG - chr6_1:15202260-15202279 None:intergenic 30.0%
CAAATATGGTTTCGGATATT+AGG + chr6_1:15202349-15202368 Msa0876810:intron 30.0%
GGATATTAGGAAAGATTTAG+AGG + chr6_1:15202362-15202381 Msa0876810:intron 30.0%
GTTCTATCCAAATATGGTTT+CGG + chr6_1:15202392-15202411 Msa0876810:intron 30.0%
! TACAGAGAGAACATTTTCAT+TGG - chr6_1:15202507-15202526 None:intergenic 30.0%
TGAAAATGTTCTCTCTGTAA+TGG + chr6_1:15202508-15202527 Msa0876810:intron 30.0%
! TTGCTGCAAATTTAAGATGT+TGG + chr6_1:15202714-15202733 Msa0876810:intron 30.0%
! ATGAGTTTTTGACCCAAAAA+GGG - chr6_1:15202810-15202829 None:intergenic 30.0%
! AATGAGTTTTTGACCCAAAA+AGG - chr6_1:15202811-15202830 None:intergenic 30.0%
TAGAATCAAACATCATCAAG+CGG - chr6_1:15202838-15202857 None:intergenic 30.0%
! CAGAATGCACAAATTTTCTA+TGG - chr6_1:15202893-15202912 None:intergenic 30.0%
!!! TCTGATTCCTCTTTATTTTG+GGG + chr6_1:15202917-15202936 Msa0876810:intron 30.0%
TAAATTGTCGCAAATTCTAG+TGG - chr6_1:15203109-15203128 None:intergenic 30.0%
TTGATTGATCTTCCAATATG+GGG + chr6_1:15203549-15203568 Msa0876810:three_prime_UTR 30.0%
AAACAGGCAATAATGTCAAA+TGG + chr6_1:15203644-15203663 Msa0876810:three_prime_UTR 30.0%
GAGAGAAGAGGATTTGAATT+AGG - chr6_1:15198699-15198718 None:intergenic 35.0%
AACAAAAATGAAAGTTCCGG+AGG + chr6_1:15198840-15198859 Msa0876810:exon 35.0%
TGAAAATTCGAATTCGGAAC+CGG + chr6_1:15198906-15198925 Msa0876810:CDS 35.0%
TTAACATGATCCATATGAGG+AGG - chr6_1:15199048-15199067 None:intergenic 35.0%
AGCTTAACATGATCCATATG+AGG - chr6_1:15199051-15199070 None:intergenic 35.0%
ACATGAATATAGAGCTCGTT+TGG - chr6_1:15199430-15199449 None:intergenic 35.0%
AGTTTAACAAATAGGCTCGT+AGG + chr6_1:15199511-15199530 Msa0876810:intron 35.0%
AGGATATGATCTATGAAGCA+TGG + chr6_1:15199536-15199555 Msa0876810:intron 35.0%
TGATCTATGAAGCATGGATA+TGG + chr6_1:15199542-15199561 Msa0876810:intron 35.0%
TATCATATCCTATGAAGCAC+GGG - chr6_1:15199694-15199713 None:intergenic 35.0%
CATACAACATAGTACTCACT+TGG + chr6_1:15199750-15199769 Msa0876810:intron 35.0%
TACAACATAGTACTCACTTG+GGG + chr6_1:15199752-15199771 Msa0876810:intron 35.0%
AGTATCTAAGCTCATACTTC+GGG + chr6_1:15199791-15199810 Msa0876810:intron 35.0%
CATAAAATAAGTTCACGCAC+AGG - chr6_1:15200168-15200187 None:intergenic 35.0%
TGAAACTCTTAAAGAGCCAA+TGG + chr6_1:15200186-15200205 Msa0876810:intron 35.0%
!! TGGTTAGTTCTAAAGTTGGT+TGG + chr6_1:15200356-15200375 Msa0876810:intron 35.0%
ATCACCCTTCTGAATAAGAT+TGG - chr6_1:15200454-15200473 None:intergenic 35.0%
TTGCTTTGTGATTGTGTAGA+TGG + chr6_1:15200580-15200599 Msa0876810:intron 35.0%
TGCTTTGTGATTGTGTAGAT+GGG + chr6_1:15200581-15200600 Msa0876810:intron 35.0%
CAATAAATGTGTTGCCAAGA+GGG + chr6_1:15200614-15200633 Msa0876810:CDS 35.0%
AGGGTTGCCTATAACATAAA+TGG + chr6_1:15200633-15200652 Msa0876810:CDS 35.0%
! GGAAAAAAAATGGTGTTAGC+AGG + chr6_1:15200939-15200958 Msa0876810:intron 35.0%
!!! GGGGATATACATGTTTTTTC+CGG + chr6_1:15200976-15200995 Msa0876810:intron 35.0%
AGTACTTAAGCAAGTTCAAG+TGG + chr6_1:15201263-15201282 Msa0876810:CDS 35.0%
GTACTTAAGCAAGTTCAAGT+GGG + chr6_1:15201264-15201283 Msa0876810:CDS 35.0%
GATGATCTAACTGAAGAACT+AGG + chr6_1:15201286-15201305 Msa0876810:CDS 35.0%
! TGAAAGTTTGTTTAGGCCTT+AGG + chr6_1:15201947-15201966 Msa0876810:intron 35.0%
! GAAAGTTTGTTTAGGCCTTA+GGG + chr6_1:15201948-15201967 Msa0876810:intron 35.0%
! AAAGTTTGTTTAGGCCTTAG+GGG + chr6_1:15201949-15201968 Msa0876810:intron 35.0%
!! TGTAGTAACTTAGCTCTGAT+AGG + chr6_1:15201987-15202006 Msa0876810:intron 35.0%
! AGCTTTACAATGGTGGAAAT+AGG - chr6_1:15202045-15202064 None:intergenic 35.0%
AAACCTTCTCCGATTCTTAA+AGG + chr6_1:15202131-15202150 Msa0876810:intron 35.0%
!!! GTCTTGATGTTGTTTCCTTT+TGG + chr6_1:15202197-15202216 Msa0876810:intron 35.0%
ACAGCCATATGAAAACCAAA+AGG - chr6_1:15202215-15202234 None:intergenic 35.0%
GTTCTATCCGAAACCATATT+TGG - chr6_1:15202402-15202421 None:intergenic 35.0%
TGGTTTCGGATAGAACATTA+TGG + chr6_1:15202406-15202425 Msa0876810:intron 35.0%
AAATGTTCTCTCTGTAATGG+TGG + chr6_1:15202511-15202530 Msa0876810:intron 35.0%
!! ATGTTGGTTTGTGATTTGCT+AGG + chr6_1:15202730-15202749 Msa0876810:intron 35.0%
!! TGTTGGTTTGTGATTTGCTA+GGG + chr6_1:15202731-15202750 Msa0876810:intron 35.0%
!! TTTGTGATTTGCTAGGGATA+GGG + chr6_1:15202737-15202756 Msa0876810:intron 35.0%
AGAATCAAACATCATCAAGC+GGG - chr6_1:15202837-15202856 None:intergenic 35.0%
TCCTTAAAGCCAGAATAGAT+TGG + chr6_1:15202999-15203018 Msa0876810:intron 35.0%
TAGAAGATCATCTGACAGTT+CGG - chr6_1:15203387-15203406 None:intergenic 35.0%
GTCAACATGTGTGAAATCAT+TGG + chr6_1:15203463-15203482 Msa0876810:intron 35.0%
TTTGGTTGAAGAGGAGAATG+CGG - chr6_1:15198796-15198815 None:intergenic 40.0%
!! ATCTCGTTGTTTTCTTCCTC+CGG - chr6_1:15198859-15198878 None:intergenic 40.0%
TCAGTTTCCGATTCCAATTC+CGG - chr6_1:15198928-15198947 None:intergenic 40.0%
ATTGGAATCGGAAACTGAGA+TGG + chr6_1:15198930-15198949 Msa0876810:CDS 40.0%
CGTCAACTTCTTTCGCAATT+CGG + chr6_1:15199072-15199091 Msa0876810:CDS 40.0%
! CGCAATTCGGTGATATTGAA+AGG + chr6_1:15199085-15199104 Msa0876810:CDS 40.0%
!! TCAGAAGTGTCAGCGTTATA+GGG - chr6_1:15199142-15199161 None:intergenic 40.0%
!! ATCAGAAGTGTCAGCGTTAT+AGG - chr6_1:15199143-15199162 None:intergenic 40.0%
AACAAATAGGCTCGTAGGAT+AGG + chr6_1:15199516-15199535 Msa0876810:intron 40.0%
ATGGACACAGACATAGATAC+CGG + chr6_1:15199561-15199580 Msa0876810:intron 40.0%
! CTCAAATTGTGTTGGCATGT+AGG - chr6_1:15199601-15199620 None:intergenic 40.0%
GTATCTAAGCTCATACTTCG+GGG + chr6_1:15199792-15199811 Msa0876810:intron 40.0%
AAACGTCCGATAGTGTCAAA+CGG - chr6_1:15199862-15199881 None:intergenic 40.0%
AGCTATCTCAAGCAATCTCA+TGG - chr6_1:15199979-15199998 None:intergenic 40.0%
GCAGCTTATGATATGTCCAT+AGG + chr6_1:15200006-15200025 Msa0876810:intron 40.0%
CCTCTTGGCAACACATTTAT+TGG - chr6_1:15200616-15200635 None:intergenic 40.0%
CCAATAAATGTGTTGCCAAG+AGG + chr6_1:15200613-15200632 Msa0876810:CDS 40.0%
TATGTTATAGGCAACCCTCT+TGG - chr6_1:15200631-15200650 None:intergenic 40.0%
GTAAATGACTCTGGTATGGA+CGG + chr6_1:15200896-15200915 Msa0876810:intron 40.0%
TAGCAGGATTATGCACTTCT+AGG + chr6_1:15200955-15200974 Msa0876810:intron 40.0%
AGCAGGATTATGCACTTCTA+GGG + chr6_1:15200956-15200975 Msa0876810:intron 40.0%
! TAACAGTGTTTTCTTGTCGC+TGG + chr6_1:15201125-15201144 Msa0876810:intron 40.0%
CATCTTTCCACTATGACCTT+TGG + chr6_1:15201233-15201252 Msa0876810:CDS 40.0%
CTTTGAACGCTATAGATGAG+AGG + chr6_1:15201488-15201507 Msa0876810:CDS 40.0%
AATTGGGCCAACTAGCATAT+TGG - chr6_1:15201776-15201795 None:intergenic 40.0%
ATGCTAGTTGGCCCAATTAT+TGG + chr6_1:15201778-15201797 Msa0876810:intron 40.0%
TGCTAGTTGGCCCAATTATT+GGG + chr6_1:15201779-15201798 Msa0876810:intron 40.0%
GTAAAGTGGGCCCAATAATT+GGG - chr6_1:15201792-15201811 None:intergenic 40.0%
TGTAAAGTGGGCCCAATAAT+TGG - chr6_1:15201793-15201812 None:intergenic 40.0%
!! AAAGAGCGCTCATGTAAAGT+GGG - chr6_1:15201805-15201824 None:intergenic 40.0%
TGAGCTCAAGAGCTTTACAA+TGG - chr6_1:15202055-15202074 None:intergenic 40.0%
! TGTCCTTTAAGAATCGGAGA+AGG - chr6_1:15202137-15202156 None:intergenic 40.0%
GACAAATCTAGCAAAGACTC+TGG + chr6_1:15202153-15202172 Msa0876810:intron 40.0%
AACATCAAGACTCGACAATG+AGG - chr6_1:15202188-15202207 None:intergenic 40.0%
! TGGTTTTCATATGGCTGTCA+TGG + chr6_1:15202217-15202236 Msa0876810:intron 40.0%
TTTCATATGGCTGTCATGGT+TGG + chr6_1:15202221-15202240 Msa0876810:intron 40.0%
TTCTCTCTGTAATGGTGGTA+AGG + chr6_1:15202516-15202535 Msa0876810:intron 40.0%
GGAAGAAAGTCTTCAACAGT+TGG - chr6_1:15202580-15202599 None:intergenic 40.0%
CTTCCTATATATTCCTGCTC+AGG + chr6_1:15202595-15202614 Msa0876810:intron 40.0%
AGTCCTGAGCAGGAATATAT+AGG - chr6_1:15202601-15202620 None:intergenic 40.0%
!! GTTTGTGATTTGCTAGGGAT+AGG + chr6_1:15202736-15202755 Msa0876810:intron 40.0%
!! GCCAATCTATTCTGGCTTTA+AGG - chr6_1:15203003-15203022 None:intergenic 40.0%
GTTAAGATTGTGTCGTGGAA+TGG + chr6_1:15203033-15203052 Msa0876810:intron 40.0%
!! CGCAAATTCTAGTGGATTGA+AGG - chr6_1:15203101-15203120 None:intergenic 40.0%
!! CAGCTATAGGCTTTGTTTGA+GGG - chr6_1:15203340-15203359 None:intergenic 40.0%
TTAGCATTAGCAGCAGCTAT+AGG - chr6_1:15203353-15203372 None:intergenic 40.0%
GTAACAGAACATGGAAAACG+AGG - chr6_1:15203694-15203713 None:intergenic 40.0%
TTCGAATTCGGAACCGGAAT+TGG + chr6_1:15198912-15198931 Msa0876810:CDS 45.0%
TTCGGAACCGGAATTGGAAT+CGG + chr6_1:15198918-15198937 Msa0876810:CDS 45.0%
GCGAAGAAAGCTAATATGCG+TGG + chr6_1:15199000-15199019 Msa0876810:CDS 45.0%
GAGTCGAATTCCTCCTCATA+TGG + chr6_1:15199035-15199054 Msa0876810:CDS 45.0%
AGGATTTATCTCGCTCCTCA+AGG + chr6_1:15199105-15199124 Msa0876810:CDS 45.0%
AGGGAGAAAGAATGACCTTG+AGG - chr6_1:15199123-15199142 None:intergenic 45.0%
ACAGACATAGATACCGGACA+CGG + chr6_1:15199567-15199586 Msa0876810:intron 45.0%
ACATAGTACTCACTTGGGGT+TGG + chr6_1:15199756-15199775 Msa0876810:intron 45.0%
CATAGTACTCACTTGGGGTT+GGG + chr6_1:15199757-15199776 Msa0876810:intron 45.0%
TAGTGTCAAACGGGCACTTA+TGG - chr6_1:15199852-15199871 None:intergenic 45.0%
AAGTGCCCGTTTGACACTAT+CGG + chr6_1:15199853-15199872 Msa0876810:intron 45.0%
AACGTCCGATAGTGTCAAAC+GGG - chr6_1:15199861-15199880 None:intergenic 45.0%
TGCACTCTGGCATTAGAATC+TGG - chr6_1:15200404-15200423 None:intergenic 45.0%
!!! AAGATTGGTTTTGGGATGCC+CGG - chr6_1:15200439-15200458 None:intergenic 45.0%
GCAGGATTATGCACTTCTAG+GGG + chr6_1:15200957-15200976 Msa0876810:intron 45.0%
TTTACCTAGGGGGAAGAAAG+AGG + chr6_1:15201209-15201228 Msa0876810:intron 45.0%
! CAGCCTTTAAGAGAGCTACT+CGG + chr6_1:15201386-15201405 Msa0876810:intron 45.0%
! AGCCTTTAAGAGAGCTACTC+GGG + chr6_1:15201387-15201406 Msa0876810:intron 45.0%
CCAACTAGCATATTGGACCT+TGG - chr6_1:15201769-15201788 None:intergenic 45.0%
CCAAGGTCCAATATGCTAGT+TGG + chr6_1:15201766-15201785 Msa0876810:intron 45.0%
!! GAAAGAGCGCTCATGTAAAG+TGG - chr6_1:15201806-15201825 None:intergenic 45.0%
TCTGTTAGAAAAGGGAGGGA+AGG + chr6_1:15201896-15201915 Msa0876810:intron 45.0%
CTGTTAGAAAAGGGAGGGAA+GGG + chr6_1:15201897-15201916 Msa0876810:intron 45.0%
CAGAGAGAACTTATCCCCTA+AGG - chr6_1:15201966-15201985 None:intergenic 45.0%
CTTAGGGGATAAGTTCTCTC+TGG + chr6_1:15201964-15201983 Msa0876810:intron 45.0%
GCTCAAGAGCTTTACAATGG+TGG - chr6_1:15202052-15202071 None:intergenic 45.0%
TCTAGCAAAGACTCTGGCAA+TGG + chr6_1:15202159-15202178 Msa0876810:intron 45.0%
! AAGCCTTATCCCACTAAGAG+GGG - chr6_1:15202455-15202474 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGA+GGG - chr6_1:15202456-15202475 None:intergenic 45.0%
TTGCTAGGGATAGGGTTTAG+AGG + chr6_1:15202745-15202764 Msa0876810:intron 45.0%
GGTTTAGAGGAGTTCAGAAC+TGG + chr6_1:15202758-15202777 Msa0876810:intron 45.0%
GAGTGGACCCCAAAATAAAG+AGG - chr6_1:15202927-15202946 None:intergenic 45.0%
CAGAGCTTGCCAATCTATTC+TGG - chr6_1:15203011-15203030 None:intergenic 45.0%
GAATAGATTGGCAAGCTCTG+TGG + chr6_1:15203011-15203030 Msa0876810:intron 45.0%
CTGTGGTTAAGATTGTGTCG+TGG + chr6_1:15203028-15203047 Msa0876810:intron 45.0%
TAGCTGACGCTTTATCGCAT+TGG + chr6_1:15203136-15203155 Msa0876810:intron 45.0%
AACACGTGGAAAGAGTGGTT+CGG + chr6_1:15203309-15203328 Msa0876810:CDS 45.0%
!! GCAGCTATAGGCTTTGTTTG+AGG - chr6_1:15203341-15203360 None:intergenic 45.0%
ATACCTGCAAGGGTCATAGT+GGG - chr6_1:15203507-15203526 None:intergenic 45.0%
AATACCTGCAAGGGTCATAG+TGG - chr6_1:15203508-15203527 None:intergenic 45.0%
CTATGACCCTTGCAGGTATT+TGG + chr6_1:15203508-15203527 Msa0876810:intron 45.0%
AAGGTAGCATCACCCCATAT+TGG - chr6_1:15203564-15203583 None:intergenic 45.0%
!!! TTATTTTTATTCTTTATATT+TGG + chr6_1:15201073-15201092 Msa0876810:intron 5.0%
! GAGATTGGGGTTTAGGGTTG+AGG - chr6_1:15198725-15198744 None:intergenic 50.0%
CAACCCTAAACCCCAATCTC+CGG + chr6_1:15198725-15198744 Msa0876810:five_prime_UTR 50.0%
TTGCCGGAGATTGGGGTTTA+GGG - chr6_1:15198731-15198750 None:intergenic 50.0%
ATAGATACCGGACACGGCAT+GGG + chr6_1:15199573-15199592 Msa0876810:intron 50.0%
!! TATGTGTTGGTGTCGGACAC+CGG + chr6_1:15199646-15199665 Msa0876810:intron 50.0%
! TCCTTGGATTAGGCATGTCC+CGG - chr6_1:15199668-15199687 None:intergenic 50.0%
CTCTGGCATTAGAATCTGGC+AGG - chr6_1:15200400-15200419 None:intergenic 50.0%
!!! AGATTGGTTTTGGGATGCCC+GGG - chr6_1:15200438-15200457 None:intergenic 50.0%
GAAACAGCAGCACACATTGC+CGG - chr6_1:15200998-15201017 None:intergenic 50.0%
ATGACCTCTTTCTTCCCCCT+AGG - chr6_1:15201216-15201235 None:intergenic 50.0%
CTCCCGAGTAGCTCTCTTAA+AGG - chr6_1:15201392-15201411 None:intergenic 50.0%
AGCTACTCGGGAGCAAAAAC+TGG + chr6_1:15201399-15201418 Msa0876810:CDS 50.0%
! AGTACGCGACTGGTCAACTT+TGG - chr6_1:15201470-15201489 None:intergenic 50.0%
TAGCGTTCAAAGTACGCGAC+TGG - chr6_1:15201480-15201499 None:intergenic 50.0%
AGAAGGCTGATAGAACGCCA+AGG + chr6_1:15201749-15201768 Msa0876810:intron 50.0%
GCTGTCATGGTTGGCAATTC+TGG + chr6_1:15202230-15202249 Msa0876810:intron 50.0%
ACTAAGAGGGGTCGACTACA+TGG - chr6_1:15202443-15202462 None:intergenic 50.0%
ATGTAGTCGACCCCTCTTAG+TGG + chr6_1:15202442-15202461 Msa0876810:intron 50.0%
TGTAGTCGACCCCTCTTAGT+GGG + chr6_1:15202443-15202462 Msa0876810:intron 50.0%
! CCAAGCCTTATCCCACTAAG+AGG - chr6_1:15202457-15202476 None:intergenic 50.0%
CCTCTTAGTGGGATAAGGCT+TGG + chr6_1:15202454-15202473 Msa0876810:intron 50.0%
GTGTCGTGGAATGGAAGAAC+TGG + chr6_1:15203042-15203061 Msa0876810:intron 50.0%
GAACCTTCTGCTTCTGTGCA+AGG - chr6_1:15203289-15203308 None:intergenic 50.0%
GAAGCAGAAGGTTCAACACG+TGG + chr6_1:15203295-15203314 Msa0876810:intron 50.0%
GGTTCAACACGTGGAAAGAG+TGG + chr6_1:15203304-15203323 Msa0876810:CDS 50.0%
TTTCCCACTATGACCCTTGC+AGG + chr6_1:15203501-15203520 Msa0876810:intron 50.0%
TGACCCTTGCAGGTATTTGG+CGG + chr6_1:15203511-15203530 Msa0876810:intron 50.0%
AAGCCGCCAAATACCTGCAA+GGG - chr6_1:15203517-15203536 None:intergenic 50.0%
GGGTTGAGGAGTGAGAGAAG+AGG - chr6_1:15198711-15198730 None:intergenic 55.0%
GTTGCCGGAGATTGGGGTTT+AGG - chr6_1:15198732-15198751 None:intergenic 55.0%
GTTGCGACGGTGGAATTGTG+CGG - chr6_1:15198762-15198781 None:intergenic 55.0%
CATAGATACCGGACACGGCA+TGG + chr6_1:15199572-15199591 Msa0876810:intron 55.0%
!! ATGTGTTGGTGTCGGACACC+GGG + chr6_1:15199647-15199666 Msa0876810:intron 55.0%
ACCGGGACATGCCTAATCCA+AGG + chr6_1:15199664-15199683 Msa0876810:intron 55.0%
TATGAAGCACGGGCACTCCT+TGG - chr6_1:15199684-15199703 None:intergenic 55.0%
!! AAGGAGTGCCCGTGCTTCAT+AGG + chr6_1:15199683-15199702 Msa0876810:intron 55.0%
CTATCGGACGTTTCACGCTC+AGG + chr6_1:15199869-15199888 Msa0876810:intron 55.0%
GGACGTTTCACGCTCAGGTT+TGG + chr6_1:15199874-15199893 Msa0876810:intron 55.0%
GGCTCGCTTAGATTGCACTC+TGG - chr6_1:15200417-15200436 None:intergenic 55.0%
GAGTGCAATCTAAGCGAGCC+CGG + chr6_1:15200417-15200436 Msa0876810:CDS 55.0%
AGTGCAATCTAAGCGAGCCC+GGG + chr6_1:15200418-15200437 Msa0876810:CDS 55.0%
CGACCCCTCTTAGTGGGATA+AGG + chr6_1:15202449-15202468 Msa0876810:intron 55.0%
GTTAGGTGTGAGTCCTGAGC+AGG - chr6_1:15202611-15202630 None:intergenic 55.0%
TCGCCTTGCACAGAAGCAGA+AGG + chr6_1:15203283-15203302 Msa0876810:intron 55.0%
CAAGCCGCCAAATACCTGCA+AGG - chr6_1:15203518-15203537 None:intergenic 55.0%
!! GGTGGTGTTGCCGGAGATTG+GGG - chr6_1:15198738-15198757 None:intergenic 60.0%
!! CGGTGGTGTTGCCGGAGATT+GGG - chr6_1:15198739-15198758 None:intergenic 60.0%
TGAAGAGGAGAATGCGGCGC+TGG - chr6_1:15198790-15198809 None:intergenic 60.0%
GCACGGGCACTCCTTGGATT+AGG - chr6_1:15199678-15199697 None:intergenic 60.0%
!! GCGGTGGTGTTGCCGGAGAT+TGG - chr6_1:15198740-15198759 None:intergenic 65.0%
!! TTGTGCGGCGGTGGTGTTGC+CGG - chr6_1:15198747-15198766 None:intergenic 65.0%
ACGGTGGAATTGTGCGGCGG+TGG - chr6_1:15198756-15198775 None:intergenic 65.0%
GCGACGGTGGAATTGTGCGG+CGG - chr6_1:15198759-15198778 None:intergenic 65.0%
GCTGGAGAAGGTTGCGACGG+TGG - chr6_1:15198772-15198791 None:intergenic 65.0%
! GGCGCTGGAGAAGGTTGCGA+CGG - chr6_1:15198775-15198794 None:intergenic 65.0%
! GGAGAATGCGGCGCTGGAGA+AGG - chr6_1:15198784-15198803 None:intergenic 65.0%
GTAGGTGCCCATGCCGTGTC+CGG - chr6_1:15199583-15199602 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 15198688 15203808 15198688 ID=Msa0876810;Name=Msa0876810
chr6_1 mRNA 15198688 15203808 15198688 ID=Msa0876810-mRNA-1;Parent=Msa0876810;Name=Msa0876810-mRNA-1;_AED=0.26;_eAED=0.26;_QI=159|1|1|1|1|1|7|268|255
chr6_1 exon 15198688 15199126 15198688 ID=Msa0876810-mRNA-1:exon:4424;Parent=Msa0876810-mRNA-1
chr6_1 exon 15200405 15200468 15200405 ID=Msa0876810-mRNA-1:exon:4425;Parent=Msa0876810-mRNA-1
chr6_1 exon 15200599 15200666 15200599 ID=Msa0876810-mRNA-1:exon:4426;Parent=Msa0876810-mRNA-1
chr6_1 exon 15201218 15201307 15201218 ID=Msa0876810-mRNA-1:exon:4427;Parent=Msa0876810-mRNA-1
chr6_1 exon 15201389 15201519 15201389 ID=Msa0876810-mRNA-1:exon:4428;Parent=Msa0876810-mRNA-1
chr6_1 exon 15203296 15203412 15203296 ID=Msa0876810-mRNA-1:exon:4429;Parent=Msa0876810-mRNA-1
chr6_1 exon 15203523 15203808 15203523 ID=Msa0876810-mRNA-1:exon:4430;Parent=Msa0876810-mRNA-1
chr6_1 five_prime_UTR 15198688 15198846 15198688 ID=Msa0876810-mRNA-1:five_prime_utr;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15198847 15199126 15198847 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15200405 15200468 15200405 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15200599 15200666 15200599 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15201218 15201307 15201218 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15201389 15201519 15201389 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15203296 15203412 15203296 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 CDS 15203523 15203540 15203523 ID=Msa0876810-mRNA-1:cds;Parent=Msa0876810-mRNA-1
chr6_1 three_prime_UTR 15203541 15203808 15203541 ID=Msa0876810-mRNA-1:three_prime_utr;Parent=Msa0876810-mRNA-1
Gene Sequence

>Msa0876810

ATGAAAGTTCCGGAGGAAGAAAACAACGAGATTAACGCTACAACAATATCATCGAATGATGAAAATTCGAATTCGGAACCGGAATTGGAATCGGAAACTGAGATGGAATTGAGATTGAAGAAATTGAAGATGAAGAAGAAACTGAAAATGGAAGCGAAGAAAGCTAATATGCGTGGTGTTTGTTATTTGAGTCGAATTCCTCCTCATATGGATCATGTTAAGCTTCGTCAACTTCTTTCGCAATTCGGTGATATTGAAAGGATTTATCTCGCTCCTCAAGATTCTAATGCCAGAGTGCAATCTAAGCGAGCCCGGGCATCCCAAAACCAATCTTATTCAGAAGGATGGGTTGAATTCGCCAATAAATGTGTTGCCAAGAGGGTTGCCTATAACATAAATGGTGAACAAATAGGGGGAAGAAAGAGGTCATCTTTCCACTATGACCTTTGGAATATTAAGTACTTAAGCAAGTTCAAGTGGGATGATCTAACTGAAGAACTAGCCTTTAAGAGAGCTACTCGGGAGCAAAAACTGGCATTAGAACTTTCTGCTGCCAAGAAAGAGAGAGATTTCTATATGTCCAAAGTTGACCAGTCGCGTACTTTGAACGCTATAGATGAGAGGTTAAAGAAGAAGCAGAAGGTTCAACACGTGGAAAGAGTGGTTCGGCATTTCCCTCAAACAAAGCCTATAGCTGCTGCTAATGCTAAAAAAAGTAAAACCGAACTGTCAGATGATCTTCTAGATGCAGTATTTGGCGGCTTGTAA

Protein sequence

>Msa0876810

MKVPEEENNEINATTISSNDENSNSEPELESETEMELRLKKLKMKKKLKMEAKKANMRGVCYLSRIPPHMDHVKLRQLLSQFGDIERIYLAPQDSNARVQSKRARASQNQSYSEGWVEFANKCVAKRVAYNINGEQIGGRKRSSFHYDLWNIKYLSKFKWDDLTEELAFKRATREQKLALELSAAKKERDFYMSKVDQSRTLNAIDERLKKKQKVQHVERVVRHFPQTKPIAAANAKKSKTELSDDLLDAVFGGL*