Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812280 | XP_003615503.1 | 87.146 | 529 | 21 | 1 | 1 | 482 | 1 | 529 | 0.0 | 923 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812280 | sp|Q9ZT96|MTEF4_ARATH | 78.870 | 407 | 85 | 1 | 58 | 463 | 113 | 519 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812280 | G7K677 | 87.146 | 529 | 21 | 1 | 1 | 482 | 1 | 529 | 0.0 | 923 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0812280 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0812280 | 0.801154 | 1.029144e-48 | -8.615850e-47 |
| Msa0001460 | Msa0812280 | 0.813380 | 2.635178e-51 | -8.615850e-47 |
| Msa0017120 | Msa0812280 | 0.801220 | 9.977471e-49 | -8.615850e-47 |
| Msa0030400 | Msa0812280 | 0.808206 | 3.469972e-50 | -8.615850e-47 |
| Msa0065690 | Msa0812280 | 0.818130 | 2.301443e-52 | -8.615850e-47 |
| Msa0091480 | Msa0812280 | 0.805156 | 1.529628e-49 | -8.615850e-47 |
| Msa0605230 | Msa0812280 | 0.836732 | 7.876886e-57 | -8.615850e-47 |
| Msa0607300 | Msa0812280 | 0.809295 | 2.030660e-50 | -8.615850e-47 |
| Msa0607440 | Msa0812280 | 0.807122 | 5.897840e-50 | -8.615850e-47 |
| Msa0622390 | Msa0812280 | 0.807241 | 5.564879e-50 | -8.615850e-47 |
| Msa0637850 | Msa0812280 | 0.815872 | 7.400331e-52 | -8.615850e-47 |
| Msa0650360 | Msa0812280 | 0.817524 | 3.153317e-52 | -8.615850e-47 |
| Msa0659040 | Msa0812280 | 0.803555 | 3.296468e-49 | -8.615850e-47 |
| Msa0690350 | Msa0812280 | 0.810494 | 1.121274e-50 | -8.615850e-47 |
| Msa0692910 | Msa0812280 | 0.819393 | 1.189071e-52 | -8.615850e-47 |
| Msa0707780 | Msa0812280 | 0.813216 | 2.864275e-51 | -8.615850e-47 |
| Msa0709480 | Msa0812280 | 0.812421 | 4.276504e-51 | -8.615850e-47 |
| Msa0724050 | Msa0812280 | 0.800285 | 1.548098e-48 | -8.615850e-47 |
| Msa0726610 | Msa0812280 | 0.807513 | 4.871669e-50 | -8.615850e-47 |
| Msa0730180 | Msa0812280 | 0.821982 | 3.022720e-53 | -8.615850e-47 |
| Msa0733000 | Msa0812280 | 0.809777 | 1.599852e-50 | -8.615850e-47 |
| Msa0739610 | Msa0812280 | 0.806273 | 8.912016e-50 | -8.615850e-47 |
| Msa0750380 | Msa0812280 | 0.821203 | 4.573742e-53 | -8.615850e-47 |
| Msa0763880 | Msa0812280 | 0.806696 | 7.255599e-50 | -8.615850e-47 |
| Msa0763910 | Msa0812280 | 0.808574 | 2.896535e-50 | -8.615850e-47 |
| Msa0770430 | Msa0812280 | 0.807259 | 5.517016e-50 | -8.615850e-47 |
| Msa0780140 | Msa0812280 | 0.801421 | 9.074336e-49 | -8.615850e-47 |
| Msa0794460 | Msa0812280 | 0.814330 | 1.627570e-51 | -8.615850e-47 |
| Msa0797220 | Msa0812280 | 0.859385 | 4.290075e-63 | -8.615850e-47 |
| Msa0798950 | Msa0812280 | 0.821865 | 3.217299e-53 | -8.615850e-47 |
| Msa0812280 | Msa0830720 | 0.832011 | 1.205409e-55 | -8.615850e-47 |
| Msa0812280 | Msa0844100 | 0.815572 | 8.630945e-52 | -8.615850e-47 |
| Msa0812280 | Msa0848760 | 0.803099 | 4.096949e-49 | -8.615850e-47 |
| Msa0812280 | Msa0851740 | 0.809341 | 1.985067e-50 | -8.615850e-47 |
| Msa0812280 | Msa0855020 | 0.806472 | 8.090776e-50 | -8.615850e-47 |
| Msa0812280 | Msa0872660 | 0.826306 | 2.916769e-54 | -8.615850e-47 |
| Msa0812280 | Msa0881050 | 0.821404 | 4.112230e-53 | -8.615850e-47 |
| Msa0812280 | Msa0887070 | 0.819387 | 1.193022e-52 | -8.615850e-47 |
| Msa0812280 | Msa0929400 | 0.805040 | 1.617553e-49 | -8.615850e-47 |
| Msa0812280 | Msa0955260 | 0.800240 | 1.581330e-48 | -8.615850e-47 |
| Msa0812280 | Msa0972730 | 0.809641 | 1.711139e-50 | -8.615850e-47 |
| Msa0812280 | Msa0975080 | 0.848394 | 6.304388e-60 | -8.615850e-47 |
| Msa0812280 | Msa0988790 | 0.804757 | 1.853341e-49 | -8.615850e-47 |
| Msa0812280 | Msa1000470 | 0.831491 | 1.619951e-55 | -8.615850e-47 |
| Msa0812280 | Msa1016110 | 0.824940 | 6.146318e-54 | -8.615850e-47 |
| Msa0812280 | Msa1026720 | 0.804163 | 2.464192e-49 | -8.615850e-47 |
| Msa0812280 | Msa1055360 | 0.818991 | 1.468301e-52 | -8.615850e-47 |
| Msa0812280 | Msa1067710 | 0.822936 | 1.813745e-53 | -8.615850e-47 |
| Msa0812280 | Msa1080840 | 0.803236 | 3.837739e-49 | -8.615850e-47 |
| Msa0812280 | Msa1081700 | 0.808485 | 3.027055e-50 | -8.615850e-47 |
| Msa0812280 | Msa1081850 | 0.810711 | 1.006154e-50 | -8.615850e-47 |
| Msa0812280 | Msa1084490 | 0.818475 | 1.922485e-52 | -8.615850e-47 |
| Msa0812280 | Msa1093390 | 0.801364 | 9.323291e-49 | -8.615850e-47 |
| Msa0812280 | Msa1118980 | 0.803151 | 3.997604e-49 | -8.615850e-47 |
| Msa0812280 | Msa1125780 | 0.806669 | 7.354020e-50 | -8.615850e-47 |
| Msa0812280 | Msa1125950 | 0.808762 | 2.641093e-50 | -8.615850e-47 |
| Msa0812280 | Msa1140010 | 0.813914 | 2.010739e-51 | -8.615850e-47 |
| Msa0812280 | Msa1152280 | 0.801546 | 8.555888e-49 | -8.615850e-47 |
| Msa0812280 | Msa1161760 | 0.808834 | 2.549374e-50 | -8.615850e-47 |
| Msa0812280 | Msa1166180 | 0.802702 | 4.948228e-49 | -8.615850e-47 |
| Msa0812280 | Msa1166280 | 0.802930 | 4.439906e-49 | -8.615850e-47 |
| Msa0812280 | Msa1171340 | 0.801078 | 1.067058e-48 | -8.615850e-47 |
| Msa0812280 | Msa1191390 | 0.828989 | 6.614424e-55 | -8.615850e-47 |
| Msa0812280 | Msa1212740 | 0.806011 | 1.011969e-49 | -8.615850e-47 |
| Msa0812280 | Msa1214900 | 0.844616 | 6.770355e-59 | -8.615850e-47 |
| Msa0812280 | Msa1222390 | 0.822244 | 2.628220e-53 | -8.615850e-47 |
| Msa0812280 | Msa1222580 | 0.829680 | 4.496048e-55 | -8.615850e-47 |
| Msa0812280 | Msa1228880 | 0.808208 | 3.467828e-50 | -8.615850e-47 |
| Msa0812280 | Msa1238370 | 0.840826 | 6.881748e-58 | -8.615850e-47 |
| Msa0812280 | Msa1259470 | 0.823474 | 1.358407e-53 | -8.615850e-47 |
| Msa0812280 | Msa1280120 | 0.837080 | 6.420247e-57 | -8.615850e-47 |
| Msa0812280 | Msa1309100 | 0.832765 | 7.841190e-56 | -8.615850e-47 |
| Msa0812280 | Msa1323270 | 0.827240 | 1.745527e-54 | -8.615850e-47 |
| Msa0812280 | Msa1325980 | 0.816408 | 5.615194e-52 | -8.615850e-47 |
| Msa0812280 | Msa1326000 | 0.803713 | 3.057285e-49 | -8.615850e-47 |
| Msa0812280 | Msa1350280 | 0.805980 | 1.027105e-49 | -8.615850e-47 |
| Msa0812280 | Msa1352290 | 0.800867 | 1.178405e-48 | -8.615850e-47 |
| Msa0812280 | Msa1365120 | 0.803846 | 2.869095e-49 | -8.615850e-47 |
| Msa0812280 | Msa1365210 | 0.801969 | 7.006953e-49 | -8.615850e-47 |
| Msa0812280 | Msa1365440 | 0.823170 | 1.599892e-53 | -8.615850e-47 |
| Msa0812280 | Msa1372560 | 0.801812 | 7.546608e-49 | -8.615850e-47 |
| Msa0812280 | Msa1376350 | 0.807159 | 5.793039e-50 | -8.615850e-47 |
| Msa0812280 | Msa1376640 | 0.807298 | 5.411299e-50 | -8.615850e-47 |
| Msa0812280 | Msa1395640 | 0.822359 | 2.470389e-53 | -8.615850e-47 |
| Msa0812280 | Msa1397540 | 0.807897 | 4.038272e-50 | -8.615850e-47 |
| Msa0812280 | Msa1406550 | 0.812782 | 3.564771e-51 | -8.615850e-47 |
| Msa0812280 | Msa1412080 | 0.805849 | 1.094361e-49 | -8.615850e-47 |
| Msa0812280 | Msa1420520 | 0.802107 | 6.563401e-49 | -8.615850e-47 |
| Msa0812280 | Msa1430760 | 0.835092 | 2.052090e-56 | -8.615850e-47 |
| Msa0812280 | Msa1435470 | 0.808855 | 2.522634e-50 | -8.615850e-47 |
| Msa0812280 | Msa1435910 | 0.812396 | 4.331035e-51 | -8.615850e-47 |
| Msa0812280 | Msa1458920 | 0.804589 | 2.008958e-49 | -8.615850e-47 |
| Msa0141550 | Msa0812280 | 0.827885 | 1.221858e-54 | -8.615850e-47 |
| Msa0146180 | Msa0812280 | 0.806587 | 7.652579e-50 | -8.615850e-47 |
| Msa0147990 | Msa0812280 | 0.813278 | 2.774726e-51 | -8.615850e-47 |
| Msa0149500 | Msa0812280 | 0.803267 | 3.782616e-49 | -8.615850e-47 |
| Msa0162030 | Msa0812280 | 0.831606 | 1.517472e-55 | -8.615850e-47 |
| Msa0162050 | Msa0812280 | 0.828754 | 7.539732e-55 | -8.615850e-47 |
| Msa0162070 | Msa0812280 | 0.822422 | 2.389507e-53 | -8.615850e-47 |
| Msa0168900 | Msa0812280 | 0.811140 | 8.125402e-51 | -8.615850e-47 |
| Msa0169960 | Msa0812280 | 0.803062 | 4.170132e-49 | -8.615850e-47 |
| Msa0173760 | Msa0812280 | 0.824885 | 6.334211e-54 | -8.615850e-47 |
| Msa0173850 | Msa0812280 | 0.819702 | 1.011006e-52 | -8.615850e-47 |
| Msa0181290 | Msa0812280 | 0.810536 | 1.097642e-50 | -8.615850e-47 |
| Msa0206940 | Msa0812280 | 0.807311 | 5.378139e-50 | -8.615850e-47 |
| Msa0208930 | Msa0812280 | 0.800208 | 1.605598e-48 | -8.615850e-47 |
| Msa0217470 | Msa0812280 | 0.809511 | 1.825383e-50 | -8.615850e-47 |
| Msa0223960 | Msa0812280 | 0.800691 | 1.279655e-48 | -8.615850e-47 |
| Msa0226800 | Msa0812280 | 0.815169 | 1.060942e-51 | -8.615850e-47 |
| Msa0380430 | Msa0812280 | 0.836278 | 1.027815e-56 | -8.615850e-47 |
| Msa0427050 | Msa0812280 | 0.800098 | 1.690342e-48 | -8.615850e-47 |
| Msa0440110 | Msa0812280 | 0.830452 | 2.913832e-55 | -8.615850e-47 |
| Msa0458790 | Msa0812280 | 0.829542 | 4.857428e-55 | -8.615850e-47 |
| Msa0476180 | Msa0812280 | 0.828599 | 8.219867e-55 | -8.615850e-47 |
| Msa0253980 | Msa0812280 | 0.803619 | 3.196658e-49 | -8.615850e-47 |
| Msa0277250 | Msa0812280 | 0.801710 | 7.917973e-49 | -8.615850e-47 |
| Msa0288380 | Msa0812280 | 0.821622 | 3.662001e-53 | -8.615850e-47 |
| Msa0524050 | Msa0812280 | 0.822388 | 2.432418e-53 | -8.615850e-47 |
| Msa0524510 | Msa0812280 | 0.802534 | 5.361197e-49 | -8.615850e-47 |
| Msa0528740 | Msa0812280 | 0.817908 | 2.582873e-52 | -8.615850e-47 |
| Msa0542040 | Msa0812280 | 0.822488 | 2.306336e-53 | -8.615850e-47 |
| Msa0554170 | Msa0812280 | 0.823297 | 1.494630e-53 | -8.615850e-47 |
| Msa0555980 | Msa0812280 | 0.824647 | 7.206390e-54 | -8.615850e-47 |
| Msa0558890 | Msa0812280 | 0.800097 | 1.690841e-48 | -8.615850e-47 |
| Msa0575460 | Msa0812280 | 0.815570 | 8.640996e-52 | -8.615850e-47 |
| Msa0576420 | Msa0812280 | 0.822538 | 2.244812e-53 | -8.615850e-47 |
| Msa0577230 | Msa0812280 | 0.831808 | 1.352907e-55 | -8.615850e-47 |
| Msa0579610 | Msa0812280 | 0.802156 | 6.413236e-49 | -8.615850e-47 |
| Msa0583930 | Msa0812280 | 0.825666 | 4.139929e-54 | -8.615850e-47 |
| Msa0583940 | Msa0812280 | 0.806812 | 6.857082e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812280 | MtrunA17_Chr5g0428941 | 87.146 | 529 | 21 | 1 | 1 | 482 | 1 | 529 | 0.0 | 923 |
| Msa0812280 | MtrunA17_Chr1g0212691 | 53.518 | 398 | 183 | 1 | 58 | 455 | 73 | 468 | 1.35e-155 | 451 |
| Msa0812280 | MtrunA17_Chr8g0391881 | 47.887 | 355 | 154 | 1 | 58 | 412 | 51 | 374 | 9.03e-114 | 340 |
| Msa0812280 | MtrunA17_Chr4g0034981 | 27.273 | 352 | 250 | 3 | 89 | 435 | 235 | 585 | 3.93e-37 | 144 |
| Msa0812280 | MtrunA17_Chr4g0043941 | 22.581 | 310 | 202 | 3 | 129 | 436 | 46 | 319 | 9.03e-33 | 127 |
| Msa0812280 | MtrunA17_Chr4g0043941 | 23.182 | 220 | 160 | 3 | 94 | 304 | 43 | 262 | 4.11e-17 | 82.4 |
| Msa0812280 | MtrunA17_Chr2g0294671 | 27.740 | 292 | 201 | 6 | 159 | 447 | 210 | 494 | 3.18e-30 | 123 |
| Msa0812280 | MtrunA17_Chr2g0294671 | 22.340 | 282 | 170 | 7 | 92 | 328 | 211 | 488 | 4.25e-14 | 74.3 |
| Msa0812280 | MtrunA17_Chr5g0445491 | 26.214 | 309 | 216 | 9 | 146 | 445 | 176 | 481 | 7.81e-26 | 110 |
| Msa0812280 | MtrunA17_Chr5g0445491 | 24.153 | 236 | 166 | 5 | 87 | 314 | 221 | 451 | 5.68e-13 | 70.9 |
| Msa0812280 | MtrunA17_Chr6g0448821 | 24.620 | 329 | 242 | 6 | 109 | 435 | 32 | 356 | 1.08e-24 | 105 |
| Msa0812280 | MtrunA17_Chr8g0391861 | 51.852 | 81 | 35 | 2 | 375 | 455 | 1 | 77 | 2.21e-19 | 84.3 |
| Msa0812280 | MtrunA17_Chr2g0304101 | 25.758 | 264 | 155 | 7 | 176 | 437 | 82 | 306 | 2.10e-18 | 85.9 |
| Msa0812280 | MtrunA17_Chr5g0417641 | 25.091 | 275 | 162 | 6 | 164 | 436 | 61 | 293 | 9.65e-16 | 77.8 |
| Msa0812280 | MtrunA17_Chr2g0311181 | 21.942 | 278 | 170 | 5 | 164 | 440 | 73 | 304 | 3.80e-15 | 76.6 |
| Msa0812280 | MtrunA17_Chr3g0127891 | 22.850 | 407 | 265 | 14 | 72 | 435 | 91 | 491 | 1.94e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0812280 | AT4G02990.2 | 78.870 | 407 | 85 | 1 | 58 | 463 | 113 | 519 | 0.0 | 661 |
| Msa0812280 | AT4G02990.1 | 78.870 | 407 | 85 | 1 | 58 | 463 | 113 | 519 | 0.0 | 661 |
| Msa0812280 | AT2G44020.1 | 46.325 | 449 | 233 | 3 | 10 | 458 | 36 | 476 | 8.78e-145 | 424 |
| Msa0812280 | AT2G21710.1 | 27.366 | 391 | 274 | 7 | 88 | 473 | 241 | 626 | 1.69e-41 | 157 |
| Msa0812280 | AT2G21710.1 | 25.091 | 275 | 190 | 6 | 58 | 317 | 277 | 550 | 5.25e-18 | 87.4 |
| Msa0812280 | AT4G38160.4 | 24.638 | 276 | 205 | 3 | 172 | 444 | 54 | 329 | 1.36e-32 | 127 |
| Msa0812280 | AT4G38160.4 | 21.145 | 227 | 166 | 5 | 90 | 304 | 39 | 264 | 1.00e-15 | 78.6 |
| Msa0812280 | AT4G38160.1 | 24.638 | 276 | 205 | 3 | 172 | 444 | 54 | 329 | 1.36e-32 | 127 |
| Msa0812280 | AT4G38160.1 | 21.145 | 227 | 166 | 5 | 90 | 304 | 39 | 264 | 1.00e-15 | 78.6 |
| Msa0812280 | AT4G38160.2 | 24.638 | 276 | 205 | 3 | 172 | 444 | 54 | 329 | 2.89e-32 | 127 |
| Msa0812280 | AT4G38160.2 | 21.145 | 227 | 166 | 5 | 90 | 304 | 39 | 264 | 1.13e-15 | 79.0 |
| Msa0812280 | AT4G38160.3 | 24.638 | 276 | 205 | 3 | 172 | 444 | 54 | 329 | 4.24e-32 | 127 |
| Msa0812280 | AT4G38160.3 | 21.145 | 227 | 166 | 5 | 90 | 304 | 39 | 264 | 1.81e-15 | 78.6 |
| Msa0812280 | AT2G21710.2 | 24.606 | 317 | 233 | 3 | 88 | 399 | 241 | 556 | 6.23e-28 | 117 |
| Msa0812280 | AT2G21710.2 | 25.091 | 275 | 190 | 6 | 58 | 317 | 277 | 550 | 4.80e-18 | 87.4 |
| Msa0812280 | AT2G21710.3 | 25.540 | 278 | 205 | 2 | 121 | 397 | 278 | 554 | 1.37e-27 | 116 |
| Msa0812280 | AT2G21710.3 | 25.091 | 275 | 190 | 6 | 58 | 317 | 277 | 550 | 5.13e-18 | 87.4 |
| Msa0812280 | AT4G14605.2 | 26.757 | 370 | 250 | 8 | 75 | 436 | 112 | 468 | 4.61e-26 | 111 |
| Msa0812280 | AT4G14605.1 | 26.757 | 370 | 250 | 8 | 75 | 436 | 112 | 468 | 4.61e-26 | 111 |
| Msa0812280 | AT1G78930.1 | 23.404 | 329 | 247 | 5 | 109 | 435 | 249 | 574 | 2.79e-24 | 106 |
| Msa0812280 | AT5G55580.2 | 23.529 | 306 | 223 | 7 | 117 | 417 | 38 | 337 | 1.78e-21 | 96.7 |
| Msa0812280 | AT5G55580.2 | 24.359 | 234 | 166 | 5 | 85 | 311 | 106 | 335 | 1.42e-13 | 72.8 |
| Msa0812280 | AT5G55580.1 | 23.529 | 306 | 223 | 7 | 117 | 417 | 144 | 443 | 6.23e-21 | 95.9 |
| Msa0812280 | AT5G55580.1 | 24.359 | 234 | 166 | 5 | 85 | 311 | 212 | 441 | 2.79e-13 | 72.4 |
| Msa0812280 | AT2G34620.1 | 26.316 | 323 | 192 | 7 | 119 | 437 | 12 | 292 | 5.70e-18 | 85.1 |
| Msa0812280 | AT1G61970.2 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.7 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.6 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.3 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.5 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.4 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT1G61970.1 | 25.562 | 356 | 246 | 9 | 101 | 447 | 61 | 406 | 1.61e-16 | 82.0 |
| Msa0812280 | AT5G55580.3 | 23.832 | 214 | 155 | 5 | 125 | 334 | 185 | 394 | 6.66e-15 | 77.0 |
| Msa0812280 | AT5G55580.3 | 23.346 | 257 | 187 | 6 | 117 | 369 | 144 | 394 | 4.51e-14 | 74.3 |
| Msa0812280 | AT2G03050.1 | 25.248 | 202 | 146 | 5 | 239 | 437 | 71 | 270 | 3.02e-13 | 70.5 |
| Msa0812280 | AT2G03050.2 | 25.248 | 202 | 146 | 5 | 239 | 437 | 72 | 271 | 3.05e-13 | 70.5 |
| Msa0812280 | AT1G62120.1 | 22.956 | 318 | 233 | 7 | 101 | 415 | 65 | 373 | 5.71e-12 | 68.2 |
| Msa0812280 | AT3G18870.1 | 25.943 | 212 | 151 | 4 | 231 | 439 | 64 | 272 | 7.67e-12 | 66.2 |
| Msa0812280 | AT5G54180.1 | 24.051 | 395 | 232 | 11 | 68 | 440 | 145 | 493 | 1.28e-11 | 67.0 |
| Msa0812280 | AT1G61980.3 | 23.125 | 320 | 193 | 8 | 163 | 438 | 87 | 397 | 9.46e-11 | 64.3 |
| Msa0812280 | AT1G61980.2 | 23.125 | 320 | 193 | 8 | 163 | 438 | 87 | 397 | 9.46e-11 | 64.3 |
| Msa0812280 | AT1G61980.1 | 23.125 | 320 | 193 | 8 | 163 | 438 | 87 | 397 | 9.46e-11 | 64.3 |
Find 102 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAGATTCCCGGAGATTT+TGG | 0.122651 | 5_3:-42203024 | Msa0812280:CDS |
| GCTTGATTATCTTGGTAAAT+TGG | 0.171843 | 5_3:-42203294 | Msa0812280:CDS |
| TGTTTGGGAAAATGGGAAAT+TGG | 0.194274 | 5_3:+42203878 | None:intergenic |
| GAGACACAACCTTATATTCT+TGG | 0.218625 | 5_3:-42202915 | Msa0812280:CDS |
| AATTGCCATGTAATTGTATT+AGG | 0.259846 | 5_3:-42203797 | Msa0812280:CDS |
| GGAAAGACCTTTGGTAGATT+TGG | 0.277570 | 5_3:-42202517 | Msa0812280:CDS |
| TTCCCAGCATTCTTCACTTA+TGG | 0.279890 | 5_3:-42202489 | Msa0812280:CDS |
| GCCGGTGGTCAAGTATCTTC+AGG | 0.299124 | 5_3:-42203192 | Msa0812280:CDS |
| TTATATTCTTGGATTCGATT+TGG | 0.301999 | 5_3:-42202904 | Msa0812280:CDS |
| ACATCTGTTGCTTATTTGAT+TGG | 0.305827 | 5_3:-42203083 | Msa0812280:CDS |
| GCTCAATTCTGTGCTTGATT+TGG | 0.309060 | 5_3:-42202745 | Msa0812280:CDS |
| AGCATTCTTCACTTATGGTT+TGG | 0.313050 | 5_3:-42202484 | Msa0812280:CDS |
| GTTTGGGAAAATGGGAAATT+GGG | 0.339125 | 5_3:+42203879 | None:intergenic |
| AACAACTATCCTCTTGTATT+GGG | 0.341713 | 5_3:-42203347 | Msa0812280:CDS |
| TAACAACTATCCTCTTGTAT+TGG | 0.342324 | 5_3:-42203348 | Msa0812280:CDS |
| AGTTTGAATCCCAACACTTC+AGG | 0.346326 | 5_3:+42203122 | None:intergenic |
| TTCATAACATCAACCGTAAC+AGG | 0.355753 | 5_3:+42203419 | None:intergenic |
| GAATGACCAAATGTTAGAAT+TGG | 0.365180 | 5_3:+42203849 | None:intergenic |
| CTTGATTATCTTGGTAAATT+GGG | 0.369437 | 5_3:-42203293 | Msa0812280:CDS |
| AAGCTTCAATGTTCTGTTGC+TGG | 0.371075 | 5_3:-42203756 | Msa0812280:intron |
| GATTTGGATTCTGAGGATTT+CGG | 0.371653 | 5_3:-42202729 | Msa0812280:CDS |
| GTTGCTTATTTGATTGGAAT+TGG | 0.373643 | 5_3:-42203077 | Msa0812280:CDS |
| ATCTTGGTAAATTGGGAGTT+AGG | 0.378790 | 5_3:-42203286 | Msa0812280:CDS |
| AAAATGCCAATTCTAACATT+TGG | 0.379697 | 5_3:-42203855 | Msa0812280:CDS |
| CTTCTCTTATCTGCAAGCTT+TGG | 0.382697 | 5_3:+42202771 | None:intergenic |
| GTTCCTGTGCTTGATTATCT+TGG | 0.385032 | 5_3:-42203302 | Msa0812280:CDS |
| TCTTCGAGGGATTTGACGTT+TGG | 0.385296 | 5_3:+42202867 | None:intergenic |
| GGACTACGACACTATTGATA+TGG | 0.387733 | 5_3:-42202358 | Msa0812280:CDS |
| AAATCGAATCCAAGAATATA+AGG | 0.400009 | 5_3:+42202906 | None:intergenic |
| ACCCGCATCCCCAAAATCTC+CGG | 0.400611 | 5_3:+42203014 | None:intergenic |
| AGGTATCTTAACTAGATTCC+CGG | 0.416131 | 5_3:-42203033 | Msa0812280:CDS |
| TATCTGCAAGCTTTGGCTCT+AGG | 0.421664 | 5_3:+42202778 | None:intergenic |
| TGATATGGAAGAGATGGAAA+TGG | 0.426007 | 5_3:-42202343 | Msa0812280:CDS |
| TATGAGTTCTTGCGAGGAAT+CGG | 0.426180 | 5_3:-42203476 | Msa0812280:CDS |
| ATGTAGTGTCAAGAAGAATA+TGG | 0.433633 | 5_3:-42203324 | Msa0812280:CDS |
| GTGGAGTATCTGGAAAGCTT+GGG | 0.446638 | 5_3:-42202969 | Msa0812280:CDS |
| GCTCAGTATCCTGACATCAT+TGG | 0.449340 | 5_3:-42202807 | Msa0812280:CDS |
| TCAAGACCATCAAGTTCATC+AGG | 0.450633 | 5_3:+42203446 | None:intergenic |
| CCGGTGGTCAAGTATCTTCA+GGG | 0.452720 | 5_3:-42203191 | Msa0812280:CDS |
| TGTGGAGTATCTGGAAAGCT+TGG | 0.452920 | 5_3:-42202970 | Msa0812280:CDS |
| ATTGTTCCTGATGAACTTGA+TGG | 0.456166 | 5_3:-42203452 | Msa0812280:CDS |
| GAGAGGTATCCTGAAGTGTT+GGG | 0.470423 | 5_3:-42203131 | Msa0812280:CDS |
| GCCGAACATTAAACTCTTCG+AGG | 0.470544 | 5_3:+42202853 | None:intergenic |
| CTTTCCAGATACTCCACAAA+AGG | 0.473709 | 5_3:+42202975 | None:intergenic |
| CATAACATGGTTGCTAAGAA+AGG | 0.477153 | 5_3:-42202441 | Msa0812280:CDS |
| GCTTCATTCTAGTGTGGTTG+TGG | 0.477857 | 5_3:-42203222 | Msa0812280:CDS |
| AAACCATAAGTGAAGAATGC+TGG | 0.479920 | 5_3:+42202486 | None:intergenic |
| GAAAGGATTAAAGTGTTCTC+TGG | 0.480326 | 5_3:-42202424 | Msa0812280:CDS |
| CAATTGAGGAAGATGATTGT+TGG | 0.489907 | 5_3:-42202609 | Msa0812280:CDS |
| AAGTGAGATGGAAAGACCTT+TGG | 0.492729 | 5_3:-42202526 | Msa0812280:CDS |
| CCCTCGAAGAGTTTAATGTT+CGG | 0.492782 | 5_3:-42202854 | Msa0812280:CDS |
| CACTATTGATATGGAAGAGA+TGG | 0.495926 | 5_3:-42202349 | Msa0812280:CDS |
| GTGTTGGGATTCAAACTTGA+GGG | 0.498220 | 5_3:-42203116 | Msa0812280:CDS |
| GGTGTTGGAAGAAGAGAACT+TGG | 0.498824 | 5_3:-42203056 | Msa0812280:CDS |
| TGTGCTTGATTTGGATTCTG+AGG | 0.499387 | 5_3:-42202736 | Msa0812280:CDS |
| TATTTGATTGGAATTGGTGT+TGG | 0.509680 | 5_3:-42203071 | Msa0812280:CDS |
| AAGGTCTTTCCATCTCACTT+TGG | 0.511086 | 5_3:+42202529 | None:intergenic |
| TGAGAGGTATCCTGAAGTGT+TGG | 0.512556 | 5_3:-42203132 | Msa0812280:CDS |
| CCACGTTAACGCAGTTCTTG+CGG | 0.514225 | 5_3:-42203259 | Msa0812280:CDS |
| TGTTACGGTTGATGTTATGA+AGG | 0.514841 | 5_3:-42203417 | Msa0812280:CDS |
| TGGTCTTGAACTTCCTGTTA+CGG | 0.514972 | 5_3:-42203432 | Msa0812280:CDS |
| GAATCTGATTCATCGCTCCT+TGG | 0.515908 | 5_3:+42202288 | None:intergenic |
| AATGTATTCATGTCAAATGA+TGG | 0.519583 | 5_3:+42202318 | None:intergenic |
| TTAGCAACCATGTTATGCCT+AGG | 0.519862 | 5_3:+42202447 | None:intergenic |
| AGTCTAGCAATAGCTAGCCT+TGG | 0.521140 | 5_3:+42202942 | None:intergenic |
| TGTTTAAAGCAAGTAGTTGA+GGG | 0.521469 | 5_3:+42202583 | None:intergenic |
| AGGTCGGTTCCAATGATGTC+AGG | 0.523721 | 5_3:+42202798 | None:intergenic |
| AACCATAAGTGAAGAATGCT+GGG | 0.531139 | 5_3:+42202487 | None:intergenic |
| CCCGCATCCCCAAAATCTCC+GGG | 0.534445 | 5_3:+42203015 | None:intergenic |
| GATTAAAGTGTTCTCTGGCA+TGG | 0.541662 | 5_3:-42202419 | Msa0812280:CDS |
| TGCAAGCTTTGGCTCTAGGT+CGG | 0.543533 | 5_3:+42202782 | None:intergenic |
| ATCTTCCTAATACAATTACA+TGG | 0.548780 | 5_3:+42203792 | None:intergenic |
| CGATTACTTCCAAAGTGAGA+TGG | 0.549323 | 5_3:-42202538 | Msa0812280:CDS |
| ATGTTTAAAGCAAGTAGTTG+AGG | 0.555715 | 5_3:+42202582 | None:intergenic |
| CCGCAAGAACTGCGTTAACG+TGG | 0.564848 | 5_3:+42203259 | None:intergenic |
| AGGATACTGAGCAATTATAG+AGG | 0.570014 | 5_3:+42202818 | None:intergenic |
| CCCTGAAGATACTTGACCAC+CGG | 0.571746 | 5_3:+42203191 | None:intergenic |
| ACACTAGAATGAAGCACTTG+TGG | 0.573884 | 5_3:+42203230 | None:intergenic |
| AGAACACGAGGAATATCATC+CGG | 0.579370 | 5_3:+42203155 | None:intergenic |
| GGTCAAGTATCTTCAGGGGA+TGG | 0.581823 | 5_3:-42203186 | Msa0812280:CDS |
| AAATCAACATGCTTCAGCAT+AGG | 0.583104 | 5_3:+42202660 | None:intergenic |
| ATATTCCTCGTGTTCTTGAG+AGG | 0.588108 | 5_3:-42203148 | Msa0812280:CDS |
| TGAGAAATTTGAGCAACGAA+TGG | 0.590339 | 5_3:-42202379 | Msa0812280:CDS |
| TCAGGGGATGGATATCAAGC+CGG | 0.594300 | 5_3:-42203174 | Msa0812280:CDS |
| ATAAGCAACAGATGTACTCA+TGG | 0.595928 | 5_3:+42203091 | None:intergenic |
| ACACTACATCCCAATACAAG+AGG | 0.604604 | 5_3:+42203338 | None:intergenic |
| CCGAACATTAAACTCTTCGA+GGG | 0.604717 | 5_3:+42202854 | None:intergenic |
| TTACCAAGATAATCAAGCAC+AGG | 0.617876 | 5_3:+42203299 | None:intergenic |
| TGGAAAGCTTGGGTATTCCA+AGG | 0.618103 | 5_3:-42202959 | Msa0812280:CDS |
| AACTCAACCAAATCTACCAA+AGG | 0.621125 | 5_3:+42202510 | None:intergenic |
| ACAAGTGCTTCATTCTAGTG+TGG | 0.623981 | 5_3:-42203228 | Msa0812280:CDS |
| ATTGTTTATGAGTTCTTGCG+AGG | 0.628501 | 5_3:-42203482 | Msa0812280:CDS |
| TGGAGTCAACTATAAAACCT+AGG | 0.628708 | 5_3:-42202464 | Msa0812280:CDS |
| TGAATACATTGATGCGACCA+AGG | 0.633841 | 5_3:-42202305 | Msa0812280:CDS |
| GTTGGAAGAAGAGAACTTGG+AGG | 0.640469 | 5_3:-42203053 | Msa0812280:CDS |
| TATAAAACCTAGGCATAACA+TGG | 0.645601 | 5_3:-42202454 | Msa0812280:CDS |
| AATCATTGAGAAGATGCCGC+AGG | 0.648015 | 5_3:-42202703 | Msa0812280:CDS |
| CGGTGGTCAAGTATCTTCAG+GGG | 0.659657 | 5_3:-42203190 | Msa0812280:CDS |
| AGTGTTGGGATTCAAACTTG+AGG | 0.668806 | 5_3:-42203117 | Msa0812280:CDS |
| TCAGCATAGGTGTAGTACTG+AGG | 0.702066 | 5_3:+42202673 | None:intergenic |
| GTACTGAGGCTAACTACCTG+CGG | 0.724109 | 5_3:+42202687 | None:intergenic |
| GGATACCTCTCAAGAACACG+AGG | 0.733931 | 5_3:+42203143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTAATTTCAGATAAACT+CGG | + | chr5_3:42202630-42202649 | None:intergenic | 20.0% |
| !!! | ATCTGAAATTAAGAAAGATA+AGG | - | chr5_3:42202635-42202654 | Msa0812280:CDS | 20.0% |
| !! | TTCTTAATTTCAGATAAACT+CGG | + | chr5_3:42202630-42202649 | None:intergenic | 20.0% |
| !!! | ATCTGAAATTAAGAAAGATA+AGG | - | chr5_3:42202635-42202654 | Msa0812280:CDS | 20.0% |
| !!! | TAGAATTGGCATTTTTGTTT+GGG | + | chr5_3:42202294-42202313 | None:intergenic | 25.0% |
| !! | TTAGAATTGGCATTTTTGTT+TGG | + | chr5_3:42202295-42202314 | None:intergenic | 25.0% |
| ! | AAAATGCCAATTCTAACATT+TGG | - | chr5_3:42202299-42202318 | Msa0812280:CDS | 25.0% |
| ! | AATTGCCATGTAATTGTATT+AGG | - | chr5_3:42202357-42202376 | Msa0812280:CDS | 25.0% |
| ! | ATCTTCCTAATACAATTACA+TGG | + | chr5_3:42202365-42202384 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCTTCATAGTTT+GGG | - | chr5_3:42202765-42202784 | Msa0812280:CDS | 25.0% |
| !! | TTGATTTTCTTCATAGTTTG+GGG | - | chr5_3:42202766-42202785 | Msa0812280:CDS | 25.0% |
| ! | CTTGATTATCTTGGTAAATT+GGG | - | chr5_3:42202861-42202880 | Msa0812280:CDS | 25.0% |
| ! | AAATCGAATCCAAGAATATA+AGG | + | chr5_3:42203251-42203270 | None:intergenic | 25.0% |
| ! | TTATATTCTTGGATTCGATT+TGG | - | chr5_3:42203250-42203269 | Msa0812280:CDS | 25.0% |
| !! | TTGATTTTCTTAAGGATTGT+GGG | - | chr5_3:42203510-42203529 | Msa0812280:intron | 25.0% |
| ! | AATGTATTCATGTCAAATGA+TGG | + | chr5_3:42203839-42203858 | None:intergenic | 25.0% |
| !!! | TAGAATTGGCATTTTTGTTT+GGG | + | chr5_3:42202294-42202313 | None:intergenic | 25.0% |
| !! | TTAGAATTGGCATTTTTGTT+TGG | + | chr5_3:42202295-42202314 | None:intergenic | 25.0% |
| ! | AAAATGCCAATTCTAACATT+TGG | - | chr5_3:42202299-42202318 | Msa0812280:CDS | 25.0% |
| ! | AATTGCCATGTAATTGTATT+AGG | - | chr5_3:42202357-42202376 | Msa0812280:CDS | 25.0% |
| ! | ATCTTCCTAATACAATTACA+TGG | + | chr5_3:42202365-42202384 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCTTCATAGTTT+GGG | - | chr5_3:42202765-42202784 | Msa0812280:CDS | 25.0% |
| !! | TTGATTTTCTTCATAGTTTG+GGG | - | chr5_3:42202766-42202785 | Msa0812280:CDS | 25.0% |
| ! | CTTGATTATCTTGGTAAATT+GGG | - | chr5_3:42202861-42202880 | Msa0812280:CDS | 25.0% |
| ! | AAATCGAATCCAAGAATATA+AGG | + | chr5_3:42203251-42203270 | None:intergenic | 25.0% |
| ! | TTATATTCTTGGATTCGATT+TGG | - | chr5_3:42203250-42203269 | Msa0812280:CDS | 25.0% |
| !! | TTGATTTTCTTAAGGATTGT+GGG | - | chr5_3:42203510-42203529 | Msa0812280:intron | 25.0% |
| ! | AATGTATTCATGTCAAATGA+TGG | + | chr5_3:42203839-42203858 | None:intergenic | 25.0% |
| !! | GCATTTTTGTTTGGGAAAAT+GGG | + | chr5_3:42202286-42202305 | None:intergenic | 30.0% |
| GAATGACCAAATGTTAGAAT+TGG | + | chr5_3:42202308-42202327 | None:intergenic | 30.0% | |
| TAATTTCAGATAAACTCGGA+CGG | + | chr5_3:42202626-42202645 | None:intergenic | 30.0% | |
| !!! | CGTTGATTTTCTTCATAGTT+TGG | - | chr5_3:42202764-42202783 | Msa0812280:CDS | 30.0% |
| TAACAACTATCCTCTTGTAT+TGG | - | chr5_3:42202806-42202825 | Msa0812280:CDS | 30.0% | |
| AACAACTATCCTCTTGTATT+GGG | - | chr5_3:42202807-42202826 | Msa0812280:CDS | 30.0% | |
| ATGTAGTGTCAAGAAGAATA+TGG | - | chr5_3:42202830-42202849 | Msa0812280:CDS | 30.0% | |
| GCTTGATTATCTTGGTAAAT+TGG | - | chr5_3:42202860-42202879 | Msa0812280:CDS | 30.0% | |
| ! | ACATCTGTTGCTTATTTGAT+TGG | - | chr5_3:42203071-42203090 | Msa0812280:CDS | 30.0% |
| GTTGCTTATTTGATTGGAAT+TGG | - | chr5_3:42203077-42203096 | Msa0812280:CDS | 30.0% | |
| TATTTGATTGGAATTGGTGT+TGG | - | chr5_3:42203083-42203102 | Msa0812280:CDS | 30.0% | |
| !!! | GAAGCATGTTGATTTTCTTA+AGG | - | chr5_3:42203502-42203521 | Msa0812280:CDS | 30.0% |
| !! | GTTGATTTTCTTAAGGATTG+TGG | - | chr5_3:42203509-42203528 | Msa0812280:intron | 30.0% |
| ! | TGTTTAAAGCAAGTAGTTGA+GGG | + | chr5_3:42203574-42203593 | None:intergenic | 30.0% |
| ! | ATGTTTAAAGCAAGTAGTTG+AGG | + | chr5_3:42203575-42203594 | None:intergenic | 30.0% |
| TATAAAACCTAGGCATAACA+TGG | - | chr5_3:42203700-42203719 | Msa0812280:intron | 30.0% | |
| !! | GCATTTTTGTTTGGGAAAAT+GGG | + | chr5_3:42202286-42202305 | None:intergenic | 30.0% |
| GAATGACCAAATGTTAGAAT+TGG | + | chr5_3:42202308-42202327 | None:intergenic | 30.0% | |
| TAATTTCAGATAAACTCGGA+CGG | + | chr5_3:42202626-42202645 | None:intergenic | 30.0% | |
| !!! | CGTTGATTTTCTTCATAGTT+TGG | - | chr5_3:42202764-42202783 | Msa0812280:CDS | 30.0% |
| TAACAACTATCCTCTTGTAT+TGG | - | chr5_3:42202806-42202825 | Msa0812280:CDS | 30.0% | |
| AACAACTATCCTCTTGTATT+GGG | - | chr5_3:42202807-42202826 | Msa0812280:CDS | 30.0% | |
| ATGTAGTGTCAAGAAGAATA+TGG | - | chr5_3:42202830-42202849 | Msa0812280:CDS | 30.0% | |
| GCTTGATTATCTTGGTAAAT+TGG | - | chr5_3:42202860-42202879 | Msa0812280:CDS | 30.0% | |
| ! | ACATCTGTTGCTTATTTGAT+TGG | - | chr5_3:42203071-42203090 | Msa0812280:CDS | 30.0% |
| GTTGCTTATTTGATTGGAAT+TGG | - | chr5_3:42203077-42203096 | Msa0812280:CDS | 30.0% | |
| TATTTGATTGGAATTGGTGT+TGG | - | chr5_3:42203083-42203102 | Msa0812280:CDS | 30.0% | |
| !!! | GAAGCATGTTGATTTTCTTA+AGG | - | chr5_3:42203502-42203521 | Msa0812280:CDS | 30.0% |
| !! | GTTGATTTTCTTAAGGATTG+TGG | - | chr5_3:42203509-42203528 | Msa0812280:intron | 30.0% |
| ! | TGTTTAAAGCAAGTAGTTGA+GGG | + | chr5_3:42203574-42203593 | None:intergenic | 30.0% |
| ! | ATGTTTAAAGCAAGTAGTTG+AGG | + | chr5_3:42203575-42203594 | None:intergenic | 30.0% |
| TATAAAACCTAGGCATAACA+TGG | - | chr5_3:42203700-42203719 | Msa0812280:intron | 30.0% | |
| !!! | TGGGAAATTGGGTTTTGTTA+TGG | + | chr5_3:42202267-42202286 | None:intergenic | 35.0% |
| GTTTGGGAAAATGGGAAATT+GGG | + | chr5_3:42202278-42202297 | None:intergenic | 35.0% | |
| TGTTTGGGAAAATGGGAAAT+TGG | + | chr5_3:42202279-42202298 | None:intergenic | 35.0% | |
| !! | GGCATTTTTGTTTGGGAAAA+TGG | + | chr5_3:42202287-42202306 | None:intergenic | 35.0% |
| AATTTCAGATAAACTCGGAC+GGG | + | chr5_3:42202625-42202644 | None:intergenic | 35.0% | |
| ATTGTTTATGAGTTCTTGCG+AGG | - | chr5_3:42202672-42202691 | Msa0812280:CDS | 35.0% | |
| ATTGTTCCTGATGAACTTGA+TGG | - | chr5_3:42202702-42202721 | Msa0812280:CDS | 35.0% | |
| TTCATAACATCAACCGTAAC+AGG | + | chr5_3:42202738-42202757 | None:intergenic | 35.0% | |
| ! | TGTTACGGTTGATGTTATGA+AGG | - | chr5_3:42202737-42202756 | Msa0812280:CDS | 35.0% |
| TTACCAAGATAATCAAGCAC+AGG | + | chr5_3:42202858-42202877 | None:intergenic | 35.0% | |
| ATCTTGGTAAATTGGGAGTT+AGG | - | chr5_3:42202868-42202887 | Msa0812280:CDS | 35.0% | |
| ATAAGCAACAGATGTACTCA+TGG | + | chr5_3:42203066-42203085 | None:intergenic | 35.0% | |
| AGGTATCTTAACTAGATTCC+CGG | - | chr5_3:42203121-42203140 | Msa0812280:CDS | 35.0% | |
| GAGACACAACCTTATATTCT+TGG | - | chr5_3:42203239-42203258 | Msa0812280:CDS | 35.0% | |
| AGGATACTGAGCAATTATAG+AGG | + | chr5_3:42203339-42203358 | None:intergenic | 35.0% | |
| ! | GATTTGGATTCTGAGGATTT+CGG | - | chr5_3:42203425-42203444 | Msa0812280:CDS | 35.0% |
| AAATCAACATGCTTCAGCAT+AGG | + | chr5_3:42203497-42203516 | None:intergenic | 35.0% | |
| CAATTGAGGAAGATGATTGT+TGG | - | chr5_3:42203545-42203564 | Msa0812280:intron | 35.0% | |
| AACTCAACCAAATCTACCAA+AGG | + | chr5_3:42203647-42203666 | None:intergenic | 35.0% | |
| AACCATAAGTGAAGAATGCT+GGG | + | chr5_3:42203670-42203689 | None:intergenic | 35.0% | |
| AAACCATAAGTGAAGAATGC+TGG | + | chr5_3:42203671-42203690 | None:intergenic | 35.0% | |
| AGCATTCTTCACTTATGGTT+TGG | - | chr5_3:42203670-42203689 | Msa0812280:intron | 35.0% | |
| TGGAGTCAACTATAAAACCT+AGG | - | chr5_3:42203690-42203709 | Msa0812280:intron | 35.0% | |
| CATAACATGGTTGCTAAGAA+AGG | - | chr5_3:42203713-42203732 | Msa0812280:intron | 35.0% | |
| ! | GAAAGGATTAAAGTGTTCTC+TGG | - | chr5_3:42203730-42203749 | Msa0812280:intron | 35.0% |
| TGAGAAATTTGAGCAACGAA+TGG | - | chr5_3:42203775-42203794 | Msa0812280:CDS | 35.0% | |
| CACTATTGATATGGAAGAGA+TGG | - | chr5_3:42203805-42203824 | Msa0812280:CDS | 35.0% | |
| TGATATGGAAGAGATGGAAA+TGG | - | chr5_3:42203811-42203830 | Msa0812280:CDS | 35.0% | |
| !!! | TGGGAAATTGGGTTTTGTTA+TGG | + | chr5_3:42202267-42202286 | None:intergenic | 35.0% |
| GTTTGGGAAAATGGGAAATT+GGG | + | chr5_3:42202278-42202297 | None:intergenic | 35.0% | |
| TGTTTGGGAAAATGGGAAAT+TGG | + | chr5_3:42202279-42202298 | None:intergenic | 35.0% | |
| !! | GGCATTTTTGTTTGGGAAAA+TGG | + | chr5_3:42202287-42202306 | None:intergenic | 35.0% |
| AATTTCAGATAAACTCGGAC+GGG | + | chr5_3:42202625-42202644 | None:intergenic | 35.0% | |
| ATTGTTTATGAGTTCTTGCG+AGG | - | chr5_3:42202672-42202691 | Msa0812280:CDS | 35.0% | |
| ATTGTTCCTGATGAACTTGA+TGG | - | chr5_3:42202702-42202721 | Msa0812280:CDS | 35.0% | |
| TTCATAACATCAACCGTAAC+AGG | + | chr5_3:42202738-42202757 | None:intergenic | 35.0% | |
| ! | TGTTACGGTTGATGTTATGA+AGG | - | chr5_3:42202737-42202756 | Msa0812280:CDS | 35.0% |
| TTACCAAGATAATCAAGCAC+AGG | + | chr5_3:42202858-42202877 | None:intergenic | 35.0% | |
| ATCTTGGTAAATTGGGAGTT+AGG | - | chr5_3:42202868-42202887 | Msa0812280:CDS | 35.0% | |
| ATAAGCAACAGATGTACTCA+TGG | + | chr5_3:42203066-42203085 | None:intergenic | 35.0% | |
| AGGTATCTTAACTAGATTCC+CGG | - | chr5_3:42203121-42203140 | Msa0812280:CDS | 35.0% | |
| GAGACACAACCTTATATTCT+TGG | - | chr5_3:42203239-42203258 | Msa0812280:CDS | 35.0% | |
| AGGATACTGAGCAATTATAG+AGG | + | chr5_3:42203339-42203358 | None:intergenic | 35.0% | |
| ! | GATTTGGATTCTGAGGATTT+CGG | - | chr5_3:42203425-42203444 | Msa0812280:CDS | 35.0% |
| AAATCAACATGCTTCAGCAT+AGG | + | chr5_3:42203497-42203516 | None:intergenic | 35.0% | |
| CAATTGAGGAAGATGATTGT+TGG | - | chr5_3:42203545-42203564 | Msa0812280:intron | 35.0% | |
| AACTCAACCAAATCTACCAA+AGG | + | chr5_3:42203647-42203666 | None:intergenic | 35.0% | |
| AACCATAAGTGAAGAATGCT+GGG | + | chr5_3:42203670-42203689 | None:intergenic | 35.0% | |
| AAACCATAAGTGAAGAATGC+TGG | + | chr5_3:42203671-42203690 | None:intergenic | 35.0% | |
| AGCATTCTTCACTTATGGTT+TGG | - | chr5_3:42203670-42203689 | Msa0812280:intron | 35.0% | |
| TGGAGTCAACTATAAAACCT+AGG | - | chr5_3:42203690-42203709 | Msa0812280:intron | 35.0% | |
| CATAACATGGTTGCTAAGAA+AGG | - | chr5_3:42203713-42203732 | Msa0812280:intron | 35.0% | |
| ! | GAAAGGATTAAAGTGTTCTC+TGG | - | chr5_3:42203730-42203749 | Msa0812280:intron | 35.0% |
| TGAGAAATTTGAGCAACGAA+TGG | - | chr5_3:42203775-42203794 | Msa0812280:CDS | 35.0% | |
| CACTATTGATATGGAAGAGA+TGG | - | chr5_3:42203805-42203824 | Msa0812280:CDS | 35.0% | |
| TGATATGGAAGAGATGGAAA+TGG | - | chr5_3:42203811-42203830 | Msa0812280:CDS | 35.0% | |
| AAGCTTCAATGTTCTGTTGC+TGG | - | chr5_3:42202398-42202417 | Msa0812280:CDS | 40.0% | |
| TTCAATGTTCTGTTGCTGGT+AGG | - | chr5_3:42202402-42202421 | Msa0812280:CDS | 40.0% | |
| CTGGTAGGACGTATAGTTAT+AGG | - | chr5_3:42202417-42202436 | Msa0812280:CDS | 40.0% | |
| TATGAGTTCTTGCGAGGAAT+CGG | - | chr5_3:42202678-42202697 | Msa0812280:CDS | 40.0% | |
| TCAAGACCATCAAGTTCATC+AGG | + | chr5_3:42202711-42202730 | None:intergenic | 40.0% | |
| ! | TGGTCTTGAACTTCCTGTTA+CGG | - | chr5_3:42202722-42202741 | Msa0812280:CDS | 40.0% |
| ACACTACATCCCAATACAAG+AGG | + | chr5_3:42202819-42202838 | None:intergenic | 40.0% | |
| GTTCCTGTGCTTGATTATCT+TGG | - | chr5_3:42202852-42202871 | Msa0812280:CDS | 40.0% | |
| ! | ACACTAGAATGAAGCACTTG+TGG | + | chr5_3:42202927-42202946 | None:intergenic | 40.0% |
| ACAAGTGCTTCATTCTAGTG+TGG | - | chr5_3:42202926-42202945 | Msa0812280:CDS | 40.0% | |
| AGAACACGAGGAATATCATC+CGG | + | chr5_3:42203002-42203021 | None:intergenic | 40.0% | |
| ATATTCCTCGTGTTCTTGAG+AGG | - | chr5_3:42203006-42203025 | Msa0812280:CDS | 40.0% | |
| AGTTTGAATCCCAACACTTC+AGG | + | chr5_3:42203035-42203054 | None:intergenic | 40.0% | |
| ! | AGTGTTGGGATTCAAACTTG+AGG | - | chr5_3:42203037-42203056 | Msa0812280:CDS | 40.0% |
| GTGTTGGGATTCAAACTTGA+GGG | - | chr5_3:42203038-42203057 | Msa0812280:CDS | 40.0% | |
| ! | AACTAGATTCCCGGAGATTT+TGG | - | chr5_3:42203130-42203149 | Msa0812280:CDS | 40.0% |
| ! | ACTAGATTCCCGGAGATTTT+GGG | - | chr5_3:42203131-42203150 | Msa0812280:CDS | 40.0% |
| ! | TAGAGTCATCAAGCCTTTTG+TGG | - | chr5_3:42203166-42203185 | Msa0812280:CDS | 40.0% |
| CTTTCCAGATACTCCACAAA+AGG | + | chr5_3:42203182-42203201 | None:intergenic | 40.0% | |
| CCGAACATTAAACTCTTCGA+GGG | + | chr5_3:42203303-42203322 | None:intergenic | 40.0% | |
| CCCTCGAAGAGTTTAATGTT+CGG | - | chr5_3:42203300-42203319 | Msa0812280:CDS | 40.0% | |
| CTTCTCTTATCTGCAAGCTT+TGG | + | chr5_3:42203386-42203405 | None:intergenic | 40.0% | |
| GCTCAATTCTGTGCTTGATT+TGG | - | chr5_3:42203409-42203428 | Msa0812280:CDS | 40.0% | |
| !! | TGTGCTTGATTTGGATTCTG+AGG | - | chr5_3:42203418-42203437 | Msa0812280:CDS | 40.0% |
| ! | TAAGGATTGTGGGTTTTCTG+TGG | - | chr5_3:42203520-42203539 | Msa0812280:intron | 40.0% |
| ! | GGTTTTCTGTGGATCAATTG+AGG | - | chr5_3:42203531-42203550 | Msa0812280:intron | 40.0% |
| CGATTACTTCCAAAGTGAGA+TGG | - | chr5_3:42203616-42203635 | Msa0812280:intron | 40.0% | |
| AAGGTCTTTCCATCTCACTT+TGG | + | chr5_3:42203628-42203647 | None:intergenic | 40.0% | |
| AAGTGAGATGGAAAGACCTT+TGG | - | chr5_3:42203628-42203647 | Msa0812280:intron | 40.0% | |
| GGAAAGACCTTTGGTAGATT+TGG | - | chr5_3:42203637-42203656 | Msa0812280:intron | 40.0% | |
| TTCCCAGCATTCTTCACTTA+TGG | - | chr5_3:42203665-42203684 | Msa0812280:intron | 40.0% | |
| TTAGCAACCATGTTATGCCT+AGG | + | chr5_3:42203710-42203729 | None:intergenic | 40.0% | |
| ! | GATTAAAGTGTTCTCTGGCA+TGG | - | chr5_3:42203735-42203754 | Msa0812280:intron | 40.0% |
| GGACTACGACACTATTGATA+TGG | - | chr5_3:42203796-42203815 | Msa0812280:CDS | 40.0% | |
| TGAATACATTGATGCGACCA+AGG | - | chr5_3:42203849-42203868 | Msa0812280:CDS | 40.0% | |
| AAGCTTCAATGTTCTGTTGC+TGG | - | chr5_3:42202398-42202417 | Msa0812280:CDS | 40.0% | |
| TTCAATGTTCTGTTGCTGGT+AGG | - | chr5_3:42202402-42202421 | Msa0812280:CDS | 40.0% | |
| CTGGTAGGACGTATAGTTAT+AGG | - | chr5_3:42202417-42202436 | Msa0812280:CDS | 40.0% | |
| TATGAGTTCTTGCGAGGAAT+CGG | - | chr5_3:42202678-42202697 | Msa0812280:CDS | 40.0% | |
| TCAAGACCATCAAGTTCATC+AGG | + | chr5_3:42202711-42202730 | None:intergenic | 40.0% | |
| ! | TGGTCTTGAACTTCCTGTTA+CGG | - | chr5_3:42202722-42202741 | Msa0812280:CDS | 40.0% |
| ACACTACATCCCAATACAAG+AGG | + | chr5_3:42202819-42202838 | None:intergenic | 40.0% | |
| GTTCCTGTGCTTGATTATCT+TGG | - | chr5_3:42202852-42202871 | Msa0812280:CDS | 40.0% | |
| ! | ACACTAGAATGAAGCACTTG+TGG | + | chr5_3:42202927-42202946 | None:intergenic | 40.0% |
| ACAAGTGCTTCATTCTAGTG+TGG | - | chr5_3:42202926-42202945 | Msa0812280:CDS | 40.0% | |
| AGAACACGAGGAATATCATC+CGG | + | chr5_3:42203002-42203021 | None:intergenic | 40.0% | |
| ATATTCCTCGTGTTCTTGAG+AGG | - | chr5_3:42203006-42203025 | Msa0812280:CDS | 40.0% | |
| AGTTTGAATCCCAACACTTC+AGG | + | chr5_3:42203035-42203054 | None:intergenic | 40.0% | |
| ! | AGTGTTGGGATTCAAACTTG+AGG | - | chr5_3:42203037-42203056 | Msa0812280:CDS | 40.0% |
| GTGTTGGGATTCAAACTTGA+GGG | - | chr5_3:42203038-42203057 | Msa0812280:CDS | 40.0% | |
| ! | AACTAGATTCCCGGAGATTT+TGG | - | chr5_3:42203130-42203149 | Msa0812280:CDS | 40.0% |
| ! | ACTAGATTCCCGGAGATTTT+GGG | - | chr5_3:42203131-42203150 | Msa0812280:CDS | 40.0% |
| ! | TAGAGTCATCAAGCCTTTTG+TGG | - | chr5_3:42203166-42203185 | Msa0812280:CDS | 40.0% |
| CTTTCCAGATACTCCACAAA+AGG | + | chr5_3:42203182-42203201 | None:intergenic | 40.0% | |
| CCGAACATTAAACTCTTCGA+GGG | + | chr5_3:42203303-42203322 | None:intergenic | 40.0% | |
| CCCTCGAAGAGTTTAATGTT+CGG | - | chr5_3:42203300-42203319 | Msa0812280:CDS | 40.0% | |
| CTTCTCTTATCTGCAAGCTT+TGG | + | chr5_3:42203386-42203405 | None:intergenic | 40.0% | |
| GCTCAATTCTGTGCTTGATT+TGG | - | chr5_3:42203409-42203428 | Msa0812280:CDS | 40.0% | |
| !! | TGTGCTTGATTTGGATTCTG+AGG | - | chr5_3:42203418-42203437 | Msa0812280:CDS | 40.0% |
| ! | TAAGGATTGTGGGTTTTCTG+TGG | - | chr5_3:42203520-42203539 | Msa0812280:intron | 40.0% |
| ! | GGTTTTCTGTGGATCAATTG+AGG | - | chr5_3:42203531-42203550 | Msa0812280:intron | 40.0% |
| CGATTACTTCCAAAGTGAGA+TGG | - | chr5_3:42203616-42203635 | Msa0812280:intron | 40.0% | |
| AAGGTCTTTCCATCTCACTT+TGG | + | chr5_3:42203628-42203647 | None:intergenic | 40.0% | |
| AAGTGAGATGGAAAGACCTT+TGG | - | chr5_3:42203628-42203647 | Msa0812280:intron | 40.0% | |
| GGAAAGACCTTTGGTAGATT+TGG | - | chr5_3:42203637-42203656 | Msa0812280:intron | 40.0% | |
| TTCCCAGCATTCTTCACTTA+TGG | - | chr5_3:42203665-42203684 | Msa0812280:intron | 40.0% | |
| TTAGCAACCATGTTATGCCT+AGG | + | chr5_3:42203710-42203729 | None:intergenic | 40.0% | |
| ! | GATTAAAGTGTTCTCTGGCA+TGG | - | chr5_3:42203735-42203754 | Msa0812280:intron | 40.0% |
| GGACTACGACACTATTGATA+TGG | - | chr5_3:42203796-42203815 | Msa0812280:CDS | 40.0% | |
| TGAATACATTGATGCGACCA+AGG | - | chr5_3:42203849-42203868 | Msa0812280:CDS | 40.0% | |
| GCTTCATTCTAGTGTGGTTG+TGG | - | chr5_3:42202932-42202951 | Msa0812280:CDS | 45.0% | |
| ! | TGTGGTTGTGGATCTTTTGC+CGG | - | chr5_3:42202944-42202963 | Msa0812280:CDS | 45.0% |
| !! | TGAGAGGTATCCTGAAGTGT+TGG | - | chr5_3:42203022-42203041 | Msa0812280:CDS | 45.0% |
| !! | GAGAGGTATCCTGAAGTGTT+GGG | - | chr5_3:42203023-42203042 | Msa0812280:CDS | 45.0% |
| ! | GGTGTTGGAAGAAGAGAACT+TGG | - | chr5_3:42203098-42203117 | Msa0812280:CDS | 45.0% |
| GTTGGAAGAAGAGAACTTGG+AGG | - | chr5_3:42203101-42203120 | Msa0812280:CDS | 45.0% | |
| ! | CTAGATTCCCGGAGATTTTG+GGG | - | chr5_3:42203132-42203151 | Msa0812280:CDS | 45.0% |
| !! | CAAGCCTTTTGTGGAGTATC+TGG | - | chr5_3:42203175-42203194 | Msa0812280:CDS | 45.0% |
| ! | TGTGGAGTATCTGGAAAGCT+TGG | - | chr5_3:42203184-42203203 | Msa0812280:CDS | 45.0% |
| ! | GTGGAGTATCTGGAAAGCTT+GGG | - | chr5_3:42203185-42203204 | Msa0812280:CDS | 45.0% |
| TGGAAAGCTTGGGTATTCCA+AGG | - | chr5_3:42203195-42203214 | Msa0812280:CDS | 45.0% | |
| ! | AGTCTAGCAATAGCTAGCCT+TGG | + | chr5_3:42203215-42203234 | None:intergenic | 45.0% |
| TCTTCGAGGGATTTGACGTT+TGG | + | chr5_3:42203290-42203309 | None:intergenic | 45.0% | |
| GCCGAACATTAAACTCTTCG+AGG | + | chr5_3:42203304-42203323 | None:intergenic | 45.0% | |
| GCTCAGTATCCTGACATCAT+TGG | - | chr5_3:42203347-42203366 | Msa0812280:CDS | 45.0% | |
| !! | TATCTGCAAGCTTTGGCTCT+AGG | + | chr5_3:42203379-42203398 | None:intergenic | 45.0% |
| AATCATTGAGAAGATGCCGC+AGG | - | chr5_3:42203451-42203470 | Msa0812280:CDS | 45.0% | |
| TCAGCATAGGTGTAGTACTG+AGG | + | chr5_3:42203484-42203503 | None:intergenic | 45.0% | |
| GAATCTGATTCATCGCTCCT+TGG | + | chr5_3:42203869-42203888 | None:intergenic | 45.0% | |
| GCTTCATTCTAGTGTGGTTG+TGG | - | chr5_3:42202932-42202951 | Msa0812280:CDS | 45.0% | |
| ! | TGTGGTTGTGGATCTTTTGC+CGG | - | chr5_3:42202944-42202963 | Msa0812280:CDS | 45.0% |
| !! | TGAGAGGTATCCTGAAGTGT+TGG | - | chr5_3:42203022-42203041 | Msa0812280:CDS | 45.0% |
| !! | GAGAGGTATCCTGAAGTGTT+GGG | - | chr5_3:42203023-42203042 | Msa0812280:CDS | 45.0% |
| ! | GGTGTTGGAAGAAGAGAACT+TGG | - | chr5_3:42203098-42203117 | Msa0812280:CDS | 45.0% |
| GTTGGAAGAAGAGAACTTGG+AGG | - | chr5_3:42203101-42203120 | Msa0812280:CDS | 45.0% | |
| ! | CTAGATTCCCGGAGATTTTG+GGG | - | chr5_3:42203132-42203151 | Msa0812280:CDS | 45.0% |
| !! | CAAGCCTTTTGTGGAGTATC+TGG | - | chr5_3:42203175-42203194 | Msa0812280:CDS | 45.0% |
| ! | TGTGGAGTATCTGGAAAGCT+TGG | - | chr5_3:42203184-42203203 | Msa0812280:CDS | 45.0% |
| ! | GTGGAGTATCTGGAAAGCTT+GGG | - | chr5_3:42203185-42203204 | Msa0812280:CDS | 45.0% |
| TGGAAAGCTTGGGTATTCCA+AGG | - | chr5_3:42203195-42203214 | Msa0812280:CDS | 45.0% | |
| ! | AGTCTAGCAATAGCTAGCCT+TGG | + | chr5_3:42203215-42203234 | None:intergenic | 45.0% |
| TCTTCGAGGGATTTGACGTT+TGG | + | chr5_3:42203290-42203309 | None:intergenic | 45.0% | |
| GCCGAACATTAAACTCTTCG+AGG | + | chr5_3:42203304-42203323 | None:intergenic | 45.0% | |
| GCTCAGTATCCTGACATCAT+TGG | - | chr5_3:42203347-42203366 | Msa0812280:CDS | 45.0% | |
| !! | TATCTGCAAGCTTTGGCTCT+AGG | + | chr5_3:42203379-42203398 | None:intergenic | 45.0% |
| AATCATTGAGAAGATGCCGC+AGG | - | chr5_3:42203451-42203470 | Msa0812280:CDS | 45.0% | |
| TCAGCATAGGTGTAGTACTG+AGG | + | chr5_3:42203484-42203503 | None:intergenic | 45.0% | |
| GAATCTGATTCATCGCTCCT+TGG | + | chr5_3:42203869-42203888 | None:intergenic | 45.0% | |
| AATTTCGCCAGAGTCCCGTT+TGG | + | chr5_3:42202468-42202487 | None:intergenic | 50.0% | |
| CCACGTTAACGCAGTTCTTG+CGG | - | chr5_3:42202895-42202914 | Msa0812280:CDS | 50.0% | |
| CCCTGAAGATACTTGACCAC+CGG | + | chr5_3:42202966-42202985 | None:intergenic | 50.0% | |
| CCGGTGGTCAAGTATCTTCA+GGG | - | chr5_3:42202963-42202982 | Msa0812280:CDS | 50.0% | |
| CGGTGGTCAAGTATCTTCAG+GGG | - | chr5_3:42202964-42202983 | Msa0812280:CDS | 50.0% | |
| GGTCAAGTATCTTCAGGGGA+TGG | - | chr5_3:42202968-42202987 | Msa0812280:CDS | 50.0% | |
| TCAGGGGATGGATATCAAGC+CGG | - | chr5_3:42202980-42202999 | Msa0812280:CDS | 50.0% | |
| GGATACCTCTCAAGAACACG+AGG | + | chr5_3:42203014-42203033 | None:intergenic | 50.0% | |
| ! | AGGTCGGTTCCAATGATGTC+AGG | + | chr5_3:42203359-42203378 | None:intergenic | 50.0% |
| !! | TGCAAGCTTTGGCTCTAGGT+CGG | + | chr5_3:42203375-42203394 | None:intergenic | 50.0% |
| GTACTGAGGCTAACTACCTG+CGG | + | chr5_3:42203470-42203489 | None:intergenic | 50.0% | |
| AATTTCGCCAGAGTCCCGTT+TGG | + | chr5_3:42202468-42202487 | None:intergenic | 50.0% | |
| CCACGTTAACGCAGTTCTTG+CGG | - | chr5_3:42202895-42202914 | Msa0812280:CDS | 50.0% | |
| CCCTGAAGATACTTGACCAC+CGG | + | chr5_3:42202966-42202985 | None:intergenic | 50.0% | |
| CCGGTGGTCAAGTATCTTCA+GGG | - | chr5_3:42202963-42202982 | Msa0812280:CDS | 50.0% | |
| CGGTGGTCAAGTATCTTCAG+GGG | - | chr5_3:42202964-42202983 | Msa0812280:CDS | 50.0% | |
| GGTCAAGTATCTTCAGGGGA+TGG | - | chr5_3:42202968-42202987 | Msa0812280:CDS | 50.0% | |
| TCAGGGGATGGATATCAAGC+CGG | - | chr5_3:42202980-42202999 | Msa0812280:CDS | 50.0% | |
| GGATACCTCTCAAGAACACG+AGG | + | chr5_3:42203014-42203033 | None:intergenic | 50.0% | |
| ! | AGGTCGGTTCCAATGATGTC+AGG | + | chr5_3:42203359-42203378 | None:intergenic | 50.0% |
| !! | TGCAAGCTTTGGCTCTAGGT+CGG | + | chr5_3:42203375-42203394 | None:intergenic | 50.0% |
| GTACTGAGGCTAACTACCTG+CGG | + | chr5_3:42203470-42203489 | None:intergenic | 50.0% | |
| ! | CTGATTCGCGGGGATCCAAA+CGG | - | chr5_3:42202450-42202469 | Msa0812280:CDS | 55.0% |
| TGATTCGCGGGGATCCAAAC+GGG | - | chr5_3:42202451-42202470 | Msa0812280:CDS | 55.0% | |
| CCGCAAGAACTGCGTTAACG+TGG | + | chr5_3:42202898-42202917 | None:intergenic | 55.0% | |
| ! | GGTTGTGGATCTTTTGCCGG+TGG | - | chr5_3:42202947-42202966 | Msa0812280:CDS | 55.0% |
| GCCGGTGGTCAAGTATCTTC+AGG | - | chr5_3:42202962-42202981 | Msa0812280:CDS | 55.0% | |
| !! | TCCCGGAGATTTTGGGGATG+CGG | - | chr5_3:42203138-42203157 | Msa0812280:CDS | 55.0% |
| ACCCGCATCCCCAAAATCTC+CGG | + | chr5_3:42203143-42203162 | None:intergenic | 55.0% | |
| !! | GAGATTTTGGGGATGCGGGT+TGG | - | chr5_3:42203143-42203162 | Msa0812280:CDS | 55.0% |
| ! | CTGATTCGCGGGGATCCAAA+CGG | - | chr5_3:42202450-42202469 | Msa0812280:CDS | 55.0% |
| TGATTCGCGGGGATCCAAAC+GGG | - | chr5_3:42202451-42202470 | Msa0812280:CDS | 55.0% | |
| CCGCAAGAACTGCGTTAACG+TGG | + | chr5_3:42202898-42202917 | None:intergenic | 55.0% | |
| ! | GGTTGTGGATCTTTTGCCGG+TGG | - | chr5_3:42202947-42202966 | Msa0812280:CDS | 55.0% |
| GCCGGTGGTCAAGTATCTTC+AGG | - | chr5_3:42202962-42202981 | Msa0812280:CDS | 55.0% | |
| !! | TCCCGGAGATTTTGGGGATG+CGG | - | chr5_3:42203138-42203157 | Msa0812280:CDS | 55.0% |
| ACCCGCATCCCCAAAATCTC+CGG | + | chr5_3:42203143-42203162 | None:intergenic | 55.0% | |
| !! | GAGATTTTGGGGATGCGGGT+TGG | - | chr5_3:42203143-42203162 | Msa0812280:CDS | 55.0% |
| !! | GGACCGATGCTGCTGATTCG+CGG | - | chr5_3:42202438-42202457 | Msa0812280:CDS | 60.0% |
| !! | GACCGATGCTGCTGATTCGC+GGG | - | chr5_3:42202439-42202458 | Msa0812280:CDS | 60.0% |
| !! | ACCGATGCTGCTGATTCGCG+GGG | - | chr5_3:42202440-42202459 | Msa0812280:CDS | 60.0% |
| TCCCCGCGAATCAGCAGCAT+CGG | + | chr5_3:42202444-42202463 | None:intergenic | 60.0% | |
| CCCGCATCCCCAAAATCTCC+GGG | + | chr5_3:42203142-42203161 | None:intergenic | 60.0% | |
| !! | CCCGGAGATTTTGGGGATGC+GGG | - | chr5_3:42203139-42203158 | Msa0812280:CDS | 60.0% |
| !! | GGACCGATGCTGCTGATTCG+CGG | - | chr5_3:42202438-42202457 | Msa0812280:CDS | 60.0% |
| !! | GACCGATGCTGCTGATTCGC+GGG | - | chr5_3:42202439-42202458 | Msa0812280:CDS | 60.0% |
| !! | ACCGATGCTGCTGATTCGCG+GGG | - | chr5_3:42202440-42202459 | Msa0812280:CDS | 60.0% |
| TCCCCGCGAATCAGCAGCAT+CGG | + | chr5_3:42202444-42202463 | None:intergenic | 60.0% | |
| CCCGCATCCCCAAAATCTCC+GGG | + | chr5_3:42203142-42203161 | None:intergenic | 60.0% | |
| !! | CCCGGAGATTTTGGGGATGC+GGG | - | chr5_3:42203139-42203158 | Msa0812280:CDS | 60.0% |
| CGGGGATCCAAACGGGACTC+TGG | - | chr5_3:42202458-42202477 | Msa0812280:CDS | 65.0% | |
| CGGGGATCCAAACGGGACTC+TGG | - | chr5_3:42202458-42202477 | Msa0812280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 42202248 | 42203928 | 42202248 | ID=Msa0812280;Name=Msa0812280 |
| chr5_3 | mRNA | 42202248 | 42203928 | 42202248 | ID=Msa0812280-mRNA-1;Parent=Msa0812280;Name=Msa0812280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|0.5|2|0|482 |
| chr5_3 | exon | 42203757 | 42203928 | 42203757 | ID=Msa0812280-mRNA-1:exon:12985;Parent=Msa0812280-mRNA-1 |
| chr5_3 | exon | 42202248 | 42203524 | 42202248 | ID=Msa0812280-mRNA-1:exon:12984;Parent=Msa0812280-mRNA-1 |
| chr5_3 | CDS | 42203757 | 42203928 | 42203757 | ID=Msa0812280-mRNA-1:cds;Parent=Msa0812280-mRNA-1 |
| chr5_3 | CDS | 42202248 | 42203524 | 42202248 | ID=Msa0812280-mRNA-1:cds;Parent=Msa0812280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
