Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350280 | XP_013451880.1 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 596 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350280 | sp|Q9SRE0|5FCLL_ARATH | 68.317 | 303 | 82 | 3 | 6 | 294 | 2 | 304 | 9.54e-143 | 408 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350280 | I3T039 | 97.619 | 294 | 7 | 0 | 1 | 294 | 1 | 294 | 0.0 | 596 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000780 | Msa1350280 | 0.805112 | 1.562291e-49 | -8.615850e-47 |
Msa0001460 | Msa1350280 | 0.820830 | 5.575667e-53 | -8.615850e-47 |
Msa0008850 | Msa1350280 | 0.801370 | 9.296631e-49 | -8.615850e-47 |
Msa0012460 | Msa1350280 | 0.814418 | 1.556261e-51 | -8.615850e-47 |
Msa0017120 | Msa1350280 | 0.822393 | 2.425909e-53 | -8.615850e-47 |
Msa0018870 | Msa1350280 | 0.826737 | 2.301343e-54 | -8.615850e-47 |
Msa0020630 | Msa1350280 | 0.802837 | 4.640822e-49 | -8.615850e-47 |
Msa0030400 | Msa1350280 | 0.807114 | 5.921265e-50 | -8.615850e-47 |
Msa0044380 | Msa1350280 | 0.804225 | 2.393099e-49 | -8.615850e-47 |
Msa0049990 | Msa1350280 | 0.804230 | 2.387281e-49 | -8.615850e-47 |
Msa0055530 | Msa1350280 | 0.810672 | 1.026089e-50 | -8.615850e-47 |
Msa0059590 | Msa1350280 | 0.806186 | 9.296862e-50 | -8.615850e-47 |
Msa0060350 | Msa1350280 | 0.823664 | 1.226170e-53 | -8.615850e-47 |
Msa0062750 | Msa1350280 | 0.802083 | 6.637472e-49 | -8.615850e-47 |
Msa0065390 | Msa1350280 | 0.809641 | 1.711785e-50 | -8.615850e-47 |
Msa0065690 | Msa1350280 | 0.818227 | 2.187698e-52 | -8.615850e-47 |
Msa0070810 | Msa1350280 | 0.803770 | 2.974317e-49 | -8.615850e-47 |
Msa0072910 | Msa1350280 | 0.824924 | 6.201572e-54 | -8.615850e-47 |
Msa0079250 | Msa1350280 | 0.819847 | 9.367334e-53 | -8.615850e-47 |
Msa0083160 | Msa1350280 | 0.824046 | 9.976720e-54 | -8.615850e-47 |
Msa0084630 | Msa1350280 | 0.801533 | 8.607463e-49 | -8.615850e-47 |
Msa0084680 | Msa1350280 | 0.805579 | 1.246879e-49 | -8.615850e-47 |
Msa0092660 | Msa1350280 | 0.813074 | 3.077422e-51 | -8.615850e-47 |
Msa0092730 | Msa1350280 | 0.817932 | 2.551898e-52 | -8.615850e-47 |
Msa0094700 | Msa1350280 | 0.802473 | 5.518438e-49 | -8.615850e-47 |
Msa0094990 | Msa1350280 | 0.802631 | 5.118916e-49 | -8.615850e-47 |
Msa0103060 | Msa1350280 | 0.803548 | 3.307414e-49 | -8.615850e-47 |
Msa0107460 | Msa1350280 | 0.824901 | 6.277760e-54 | -8.615850e-47 |
Msa0110710 | Msa1350280 | 0.808894 | 2.474269e-50 | -8.615850e-47 |
Msa1344430 | Msa1350280 | 0.828526 | 8.562512e-55 | -8.615850e-47 |
Msa1344940 | Msa1350280 | 0.828223 | 1.013124e-54 | -8.615850e-47 |
Msa1345120 | Msa1350280 | 0.831145 | 1.970154e-55 | -8.615850e-47 |
Msa1349360 | Msa1350280 | 0.830627 | 2.640338e-55 | -8.615850e-47 |
Msa1350280 | Msa1357380 | 0.814549 | 1.456075e-51 | -8.615850e-47 |
Msa1350280 | Msa1359620 | 0.820048 | 8.426404e-53 | -8.615850e-47 |
Msa1350280 | Msa1365120 | 0.809879 | 1.521421e-50 | -8.615850e-47 |
Msa1350280 | Msa1366700 | 0.828260 | 9.926677e-55 | -8.615850e-47 |
Msa1350280 | Msa1367600 | 0.810525 | 1.104080e-50 | -8.615850e-47 |
Msa1350280 | Msa1368730 | 0.812569 | 3.969809e-51 | -8.615850e-47 |
Msa1350280 | Msa1369900 | 0.845639 | 3.583105e-59 | -8.615850e-47 |
Msa1350280 | Msa1371840 | 0.812007 | 5.263919e-51 | -8.615850e-47 |
Msa1350280 | Msa1373950 | 0.800145 | 1.653363e-48 | -8.615850e-47 |
Msa1350280 | Msa1374810 | 0.806605 | 7.583632e-50 | -8.615850e-47 |
Msa1350280 | Msa1374850 | 0.802909 | 4.484429e-49 | -8.615850e-47 |
Msa1350280 | Msa1375630 | 0.820979 | 5.150276e-53 | -8.615850e-47 |
Msa1350280 | Msa1376530 | 0.820067 | 8.343401e-53 | -8.615850e-47 |
Msa1350280 | Msa1376640 | 0.820105 | 8.177584e-53 | -8.615850e-47 |
Msa1350280 | Msa1386520 | 0.804331 | 2.274490e-49 | -8.615850e-47 |
Msa1350280 | Msa1387090 | 0.804327 | 2.278653e-49 | -8.615850e-47 |
Msa1350280 | Msa1395640 | 0.812144 | 4.913826e-51 | -8.615850e-47 |
Msa1350280 | Msa1397110 | 0.815006 | 1.153351e-51 | -8.615850e-47 |
Msa1350280 | Msa1397540 | 0.811015 | 8.648409e-51 | -8.615850e-47 |
Msa1350280 | Msa1403700 | 0.817182 | 3.766089e-52 | -8.615850e-47 |
Msa1350280 | Msa1403900 | 0.820789 | 5.696893e-53 | -8.615850e-47 |
Msa1350280 | Msa1404370 | 0.824763 | 6.769073e-54 | -8.615850e-47 |
Msa1350280 | Msa1405770 | 0.821854 | 3.235742e-53 | -8.615850e-47 |
Msa1350280 | Msa1406550 | 0.820295 | 7.396116e-53 | -8.615850e-47 |
Msa1350280 | Msa1407710 | 0.825461 | 4.627810e-54 | -8.615850e-47 |
Msa1350280 | Msa1408190 | 0.819630 | 1.049914e-52 | -8.615850e-47 |
Msa1350280 | Msa1410170 | 0.827940 | 1.185405e-54 | -8.615850e-47 |
Msa1350280 | Msa1412080 | 0.823538 | 1.312657e-53 | -8.615850e-47 |
Msa1350280 | Msa1412520 | 0.833353 | 5.598869e-56 | -8.615850e-47 |
Msa1350280 | Msa1416460 | 0.804994 | 1.653701e-49 | -8.615850e-47 |
Msa1350280 | Msa1418200 | 0.800294 | 1.541579e-48 | -8.615850e-47 |
Msa1350280 | Msa1418600 | 0.811628 | 6.366945e-51 | -8.615850e-47 |
Msa1350280 | Msa1420520 | 0.804486 | 2.110704e-49 | -8.615850e-47 |
Msa1350280 | Msa1422490 | 0.813638 | 2.312445e-51 | -8.615850e-47 |
Msa1350280 | Msa1422500 | 0.803253 | 3.807843e-49 | -8.615850e-47 |
Msa1350280 | Msa1425510 | 0.809534 | 1.804075e-50 | -8.615850e-47 |
Msa1350280 | Msa1429830 | 0.813656 | 2.291617e-51 | -8.615850e-47 |
Msa1350280 | Msa1430270 | 0.802087 | 6.626012e-49 | -8.615850e-47 |
Msa1350280 | Msa1430760 | 0.843958 | 1.016961e-58 | -8.615850e-47 |
Msa1350280 | Msa1431730 | 0.821648 | 3.611321e-53 | -8.615850e-47 |
Msa1350280 | Msa1432470 | 0.803778 | 2.963260e-49 | -8.615850e-47 |
Msa1350280 | Msa1432640 | 0.801078 | 1.066793e-48 | -8.615850e-47 |
Msa1350280 | Msa1435470 | 0.806499 | 7.984623e-50 | -8.615850e-47 |
Msa1350280 | Msa1435670 | 0.802159 | 6.402942e-49 | -8.615850e-47 |
Msa1350280 | Msa1435910 | 0.849129 | 3.942963e-60 | -8.615850e-47 |
Msa1350280 | Msa1437320 | 0.800631 | 1.316524e-48 | -8.615850e-47 |
Msa1350280 | Msa1437650 | 0.827650 | 1.391152e-54 | -8.615850e-47 |
Msa1350280 | Msa1448990 | 0.820672 | 6.059971e-53 | -8.615850e-47 |
Msa1350280 | Msa1450420 | 0.803340 | 3.652623e-49 | -8.615850e-47 |
Msa1350280 | Msa1451840 | 0.808965 | 2.389065e-50 | -8.615850e-47 |
Msa1350280 | Msa1455120 | 0.812058 | 5.132336e-51 | -8.615850e-47 |
Msa1350280 | Msa1458920 | 0.804647 | 1.953672e-49 | -8.615850e-47 |
Msa0604700 | Msa1350280 | 0.827717 | 1.340770e-54 | -8.615850e-47 |
Msa0605230 | Msa1350280 | 0.806111 | 9.640582e-50 | -8.615850e-47 |
Msa0607280 | Msa1350280 | 0.814784 | 1.291590e-51 | -8.615850e-47 |
Msa0607300 | Msa1350280 | 0.823796 | 1.142056e-53 | -8.615850e-47 |
Msa0607440 | Msa1350280 | 0.812811 | 3.512605e-51 | -8.615850e-47 |
Msa0617370 | Msa1350280 | 0.801574 | 8.445622e-49 | -8.615850e-47 |
Msa0618260 | Msa1350280 | 0.803273 | 3.771953e-49 | -8.615850e-47 |
Msa0619330 | Msa1350280 | 0.825432 | 4.702041e-54 | -8.615850e-47 |
Msa0622390 | Msa1350280 | 0.812696 | 3.723532e-51 | -8.615850e-47 |
Msa0622690 | Msa1350280 | 0.800730 | 1.256697e-48 | -8.615850e-47 |
Msa0623270 | Msa1350280 | 0.811581 | 6.518418e-51 | -8.615850e-47 |
Msa0628060 | Msa1350280 | 0.810433 | 1.155509e-50 | -8.615850e-47 |
Msa0629500 | Msa1350280 | 0.813588 | 2.371883e-51 | -8.615850e-47 |
Msa0635130 | Msa1350280 | 0.830968 | 2.178088e-55 | -8.615850e-47 |
Msa0635350 | Msa1350280 | 0.826957 | 2.039108e-54 | -8.615850e-47 |
Msa0637850 | Msa1350280 | 0.833863 | 4.177307e-56 | -8.615850e-47 |
Msa0645780 | Msa1350280 | 0.835639 | 1.492979e-56 | -8.615850e-47 |
Msa0645820 | Msa1350280 | 0.814318 | 1.637263e-51 | -8.615850e-47 |
Msa0646390 | Msa1350280 | 0.827935 | 1.188744e-54 | -8.615850e-47 |
Msa0647000 | Msa1350280 | 0.808282 | 3.343935e-50 | -8.615850e-47 |
Msa0647110 | Msa1350280 | 0.819137 | 1.359921e-52 | -8.615850e-47 |
Msa0650360 | Msa1350280 | 0.843680 | 1.207090e-58 | -8.615850e-47 |
Msa0657820 | Msa1350280 | 0.806488 | 8.029001e-50 | -8.615850e-47 |
Msa0659040 | Msa1350280 | 0.817401 | 3.361383e-52 | -8.615850e-47 |
Msa0667970 | Msa1350280 | 0.810736 | 9.939052e-51 | -8.615850e-47 |
Msa0668160 | Msa1350280 | 0.804543 | 2.053847e-49 | -8.615850e-47 |
Msa0672350 | Msa1350280 | 0.822759 | 1.994204e-53 | -8.615850e-47 |
Msa0681890 | Msa1350280 | 0.803095 | 4.104596e-49 | -8.615850e-47 |
Msa0685540 | Msa1350280 | 0.810005 | 1.429243e-50 | -8.615850e-47 |
Msa0687540 | Msa1350280 | 0.807416 | 5.109565e-50 | -8.615850e-47 |
Msa0690350 | Msa1350280 | 0.845105 | 4.998678e-59 | -8.615850e-47 |
Msa0690720 | Msa1350280 | 0.815569 | 8.645191e-52 | -8.615850e-47 |
Msa0692910 | Msa1350280 | 0.839928 | 1.181492e-57 | -8.615850e-47 |
Msa0703760 | Msa1350280 | 0.806064 | 9.861298e-50 | -8.615850e-47 |
Msa0704990 | Msa1350280 | 0.825457 | 4.638228e-54 | -8.615850e-47 |
Msa0705030 | Msa1350280 | 0.816675 | 4.893914e-52 | -8.615850e-47 |
Msa0707780 | Msa1350280 | 0.833353 | 5.600738e-56 | -8.615850e-47 |
Msa0709480 | Msa1350280 | 0.817170 | 3.788937e-52 | -8.615850e-47 |
Msa0710950 | Msa1350280 | 0.805564 | 1.256242e-49 | -8.615850e-47 |
Msa0712440 | Msa1350280 | 0.805599 | 1.235006e-49 | -8.615850e-47 |
Msa0715180 | Msa1350280 | 0.803053 | 4.188495e-49 | -8.615850e-47 |
Msa0717090 | Msa1350280 | 0.817758 | 2.793369e-52 | -8.615850e-47 |
Msa0719340 | Msa1350280 | 0.815095 | 1.101664e-51 | -8.615850e-47 |
Msa0720270 | Msa1350280 | 0.820443 | 6.842663e-53 | -8.615850e-47 |
Msa0726610 | Msa1350280 | 0.831143 | 1.972290e-55 | -8.615850e-47 |
Msa0730180 | Msa1350280 | 0.856679 | 2.733716e-62 | -8.615850e-47 |
Msa0733000 | Msa1350280 | 0.808302 | 3.310183e-50 | -8.615850e-47 |
Msa0735470 | Msa1350280 | 0.811657 | 6.274545e-51 | -8.615850e-47 |
Msa0749900 | Msa1350280 | 0.828965 | 6.702975e-55 | -8.615850e-47 |
Msa0750380 | Msa1350280 | 0.811684 | 6.191337e-51 | -8.615850e-47 |
Msa0754500 | Msa1350280 | 0.805234 | 1.473073e-49 | -8.615850e-47 |
Msa0756480 | Msa1350280 | 0.829093 | 6.241140e-55 | -8.615850e-47 |
Msa0760890 | Msa1350280 | 0.817543 | 3.122653e-52 | -8.615850e-47 |
Msa0764790 | Msa1350280 | 0.812930 | 3.308455e-51 | -8.615850e-47 |
Msa0766030 | Msa1350280 | 0.817578 | 3.066931e-52 | -8.615850e-47 |
Msa0770430 | Msa1350280 | 0.830353 | 3.080924e-55 | -8.615850e-47 |
Msa0772150 | Msa1350280 | 0.838201 | 3.309205e-57 | -8.615850e-47 |
Msa0773980 | Msa1350280 | 0.826102 | 3.261051e-54 | -8.615850e-47 |
Msa0776290 | Msa1350280 | 0.810861 | 9.337964e-51 | -8.615850e-47 |
Msa0780140 | Msa1350280 | 0.816044 | 6.773194e-52 | -8.615850e-47 |
Msa0786090 | Msa1350280 | 0.811937 | 5.453749e-51 | -8.615850e-47 |
Msa0789800 | Msa1350280 | 0.802181 | 6.337787e-49 | -8.615850e-47 |
Msa0790830 | Msa1350280 | 0.814579 | 1.433786e-51 | -8.615850e-47 |
Msa0794460 | Msa1350280 | 0.807401 | 5.147860e-50 | -8.615850e-47 |
Msa0797220 | Msa1350280 | 0.825784 | 3.880517e-54 | -8.615850e-47 |
Msa0798950 | Msa1350280 | 0.813291 | 2.757638e-51 | -8.615850e-47 |
Msa0800130 | Msa1350280 | 0.809123 | 2.210930e-50 | -8.615850e-47 |
Msa0802210 | Msa1350280 | 0.829927 | 3.914797e-55 | -8.615850e-47 |
Msa0808420 | Msa1350280 | 0.829516 | 4.928524e-55 | -8.615850e-47 |
Msa0811510 | Msa1350280 | 0.809775 | 1.601800e-50 | -8.615850e-47 |
Msa0812280 | Msa1350280 | 0.805980 | 1.027105e-49 | -8.615850e-47 |
Msa0814760 | Msa1350280 | 0.801054 | 1.079242e-48 | -8.615850e-47 |
Msa0823300 | Msa1350280 | 0.809847 | 1.545431e-50 | -8.615850e-47 |
Msa0824140 | Msa1350280 | 0.821707 | 3.499934e-53 | -8.615850e-47 |
Msa0829430 | Msa1350280 | 0.807434 | 5.065554e-50 | -8.615850e-47 |
Msa0830120 | Msa1350280 | 0.831659 | 1.472611e-55 | -8.615850e-47 |
Msa0830450 | Msa1350280 | 0.833695 | 4.600282e-56 | -8.615850e-47 |
Msa0830720 | Msa1350280 | 0.815785 | 7.736448e-52 | -8.615850e-47 |
Msa0830900 | Msa1350280 | 0.804387 | 2.213940e-49 | -8.615850e-47 |
Msa0835510 | Msa1350280 | 0.835397 | 1.718639e-56 | -8.615850e-47 |
Msa0836200 | Msa1350280 | 0.834628 | 2.685022e-56 | -8.615850e-47 |
Msa0837590 | Msa1350280 | 0.803103 | 4.090413e-49 | -8.615850e-47 |
Msa0840630 | Msa1350280 | 0.815145 | 1.073945e-51 | -8.615850e-47 |
Msa0841980 | Msa1350280 | 0.822640 | 2.126232e-53 | -8.615850e-47 |
Msa0121080 | Msa1350280 | 0.807610 | 4.647670e-50 | -8.615850e-47 |
Msa0127080 | Msa1350280 | 0.815361 | 9.616840e-52 | -8.615850e-47 |
Msa0131390 | Msa1350280 | 0.828110 | 1.078587e-54 | -8.615850e-47 |
Msa0132180 | Msa1350280 | 0.804719 | 1.887016e-49 | -8.615850e-47 |
Msa0135980 | Msa1350280 | 0.806573 | 7.704840e-50 | -8.615850e-47 |
Msa0137600 | Msa1350280 | 0.812769 | 3.588770e-51 | -8.615850e-47 |
Msa0139050 | Msa1350280 | 0.805799 | 1.121092e-49 | -8.615850e-47 |
Msa0141550 | Msa1350280 | 0.848173 | 7.253744e-60 | -8.615850e-47 |
Msa0141670 | Msa1350280 | 0.812292 | 4.562829e-51 | -8.615850e-47 |
Msa0143970 | Msa1350280 | 0.824943 | 6.138527e-54 | -8.615850e-47 |
Msa0143980 | Msa1350280 | 0.821326 | 4.285161e-53 | -8.615850e-47 |
Msa0144340 | Msa1350280 | 0.824254 | 8.914987e-54 | -8.615850e-47 |
Msa0147990 | Msa1350280 | 0.839377 | 1.643397e-57 | -8.615850e-47 |
Msa0149500 | Msa1350280 | 0.803771 | 2.973042e-49 | -8.615850e-47 |
Msa0152380 | Msa1350280 | 0.809806 | 1.577411e-50 | -8.615850e-47 |
Msa0155540 | Msa1350280 | 0.823098 | 1.662881e-53 | -8.615850e-47 |
Msa0157020 | Msa1350280 | 0.815008 | 1.151655e-51 | -8.615850e-47 |
Msa0159750 | Msa1350280 | 0.807615 | 4.635999e-50 | -8.615850e-47 |
Msa0162030 | Msa1350280 | 0.824050 | 9.955587e-54 | -8.615850e-47 |
Msa0162050 | Msa1350280 | 0.825476 | 4.591821e-54 | -8.615850e-47 |
Msa0162070 | Msa1350280 | 0.827728 | 1.332932e-54 | -8.615850e-47 |
Msa0164630 | Msa1350280 | 0.802486 | 5.484636e-49 | -8.615850e-47 |
Msa0168390 | Msa1350280 | 0.800300 | 1.537733e-48 | -8.615850e-47 |
Msa0168900 | Msa1350280 | 0.814098 | 1.831474e-51 | -8.615850e-47 |
Msa0171920 | Msa1350280 | 0.804544 | 2.052848e-49 | -8.615850e-47 |
Msa0173610 | Msa1350280 | 0.811145 | 8.103370e-51 | -8.615850e-47 |
Msa0173760 | Msa1350280 | 0.818059 | 2.388780e-52 | -8.615850e-47 |
Msa0173850 | Msa1350280 | 0.814890 | 1.223448e-51 | -8.615850e-47 |
Msa0175530 | Msa1350280 | 0.818203 | 2.215366e-52 | -8.615850e-47 |
Msa0176710 | Msa1350280 | 0.848444 | 6.104185e-60 | -8.615850e-47 |
Msa0177490 | Msa1350280 | 0.823289 | 1.500909e-53 | -8.615850e-47 |
Msa0181010 | Msa1350280 | 0.803076 | 4.143192e-49 | -8.615850e-47 |
Msa0181020 | Msa1350280 | 0.819050 | 1.423447e-52 | -8.615850e-47 |
Msa0185550 | Msa1350280 | 0.841760 | 3.908841e-58 | -8.615850e-47 |
Msa0190840 | Msa1350280 | 0.828421 | 9.076798e-55 | -8.615850e-47 |
Msa0192020 | Msa1350280 | 0.839072 | 1.971927e-57 | -8.615850e-47 |
Msa0192710 | Msa1350280 | 0.806829 | 6.802868e-50 | -8.615850e-47 |
Msa0197900 | Msa1350280 | 0.816529 | 5.275387e-52 | -8.615850e-47 |
Msa0206600 | Msa1350280 | 0.811592 | 6.480530e-51 | -8.615850e-47 |
Msa0206940 | Msa1350280 | 0.827974 | 1.163106e-54 | -8.615850e-47 |
Msa0206970 | Msa1350280 | 0.808115 | 3.629171e-50 | -8.615850e-47 |
Msa0208930 | Msa1350280 | 0.807299 | 5.408773e-50 | -8.615850e-47 |
Msa0213080 | Msa1350280 | 0.810181 | 1.309697e-50 | -8.615850e-47 |
Msa0217470 | Msa1350280 | 0.864204 | 1.438607e-64 | -8.615850e-47 |
Msa0218860 | Msa1350280 | 0.841517 | 4.530730e-58 | -8.615850e-47 |
Msa0224960 | Msa1350280 | 0.814213 | 1.727070e-51 | -8.615850e-47 |
Msa0225010 | Msa1350280 | 0.804011 | 2.650516e-49 | -8.615850e-47 |
Msa0226800 | Msa1350280 | 0.821265 | 4.426104e-53 | -8.615850e-47 |
Msa0236330 | Msa1350280 | 0.812259 | 4.639202e-51 | -8.615850e-47 |
Msa0236350 | Msa1350280 | 0.808225 | 3.437692e-50 | -8.615850e-47 |
Msa1226360 | Msa1350280 | 0.808260 | 3.379748e-50 | -8.615850e-47 |
Msa1226600 | Msa1350280 | 0.822529 | 2.255872e-53 | -8.615850e-47 |
Msa1228880 | Msa1350280 | 0.820733 | 5.867842e-53 | -8.615850e-47 |
Msa1229050 | Msa1350280 | 0.833001 | 6.851058e-56 | -8.615850e-47 |
Msa1233770 | Msa1350280 | 0.837131 | 6.227801e-57 | -8.615850e-47 |
Msa1238370 | Msa1350280 | 0.810205 | 1.294397e-50 | -8.615850e-47 |
Msa1238710 | Msa1350280 | 0.810327 | 1.218277e-50 | -8.615850e-47 |
Msa1243860 | Msa1350280 | 0.811637 | 6.338496e-51 | -8.615850e-47 |
Msa1248400 | Msa1350280 | 0.805242 | 1.467423e-49 | -8.615850e-47 |
Msa1258770 | Msa1350280 | 0.820649 | 6.133520e-53 | -8.615850e-47 |
Msa1259470 | Msa1350280 | 0.833281 | 5.834931e-56 | -8.615850e-47 |
Msa1260760 | Msa1350280 | 0.812111 | 4.997316e-51 | -8.615850e-47 |
Msa1262310 | Msa1350280 | 0.813329 | 2.705095e-51 | -8.615850e-47 |
Msa1264560 | Msa1350280 | 0.809965 | 1.457890e-50 | -8.615850e-47 |
Msa1271490 | Msa1350280 | 0.831869 | 1.307126e-55 | -8.615850e-47 |
Msa1271510 | Msa1350280 | 0.823208 | 1.567444e-53 | -8.615850e-47 |
Msa1276080 | Msa1350280 | 0.844120 | 9.201631e-59 | -8.615850e-47 |
Msa1280020 | Msa1350280 | 0.834408 | 3.050305e-56 | -8.615850e-47 |
Msa1280120 | Msa1350280 | 0.803412 | 3.529396e-49 | -8.615850e-47 |
Msa1291140 | Msa1350280 | 0.821860 | 3.225610e-53 | -8.615850e-47 |
Msa1293530 | Msa1350280 | 0.807981 | 3.876088e-50 | -8.615850e-47 |
Msa1309100 | Msa1350280 | 0.824178 | 9.290658e-54 | -8.615850e-47 |
Msa1309360 | Msa1350280 | 0.834813 | 2.413045e-56 | -8.615850e-47 |
Msa1325980 | Msa1350280 | 0.804492 | 2.105237e-49 | -8.615850e-47 |
Msa1326000 | Msa1350280 | 0.810042 | 1.402794e-50 | -8.615850e-47 |
Msa1330280 | Msa1350280 | 0.830218 | 3.324421e-55 | -8.615850e-47 |
Msa0365870 | Msa1350280 | 0.808379 | 3.188513e-50 | -8.615850e-47 |
Msa0376900 | Msa1350280 | 0.809925 | 1.486606e-50 | -8.615850e-47 |
Msa0380310 | Msa1350280 | 0.821699 | 3.513718e-53 | -8.615850e-47 |
Msa0380360 | Msa1350280 | 0.825439 | 4.685237e-54 | -8.615850e-47 |
Msa0380420 | Msa1350280 | 0.818569 | 1.830743e-52 | -8.615850e-47 |
Msa0380430 | Msa1350280 | 0.870112 | 1.866079e-66 | -8.615850e-47 |
Msa0382560 | Msa1350280 | 0.810463 | 1.138384e-50 | -8.615850e-47 |
Msa0386390 | Msa1350280 | 0.803541 | 3.318304e-49 | -8.615850e-47 |
Msa0393140 | Msa1350280 | 0.821320 | 4.299284e-53 | -8.615850e-47 |
Msa0396970 | Msa1350280 | 0.806374 | 8.485731e-50 | -8.615850e-47 |
Msa0398850 | Msa1350280 | 0.800761 | 1.238133e-48 | -8.615850e-47 |
Msa0413180 | Msa1350280 | 0.819334 | 1.226303e-52 | -8.615850e-47 |
Msa0413740 | Msa1350280 | 0.825030 | 5.854112e-54 | -8.615850e-47 |
Msa0414070 | Msa1350280 | 0.831796 | 1.362277e-55 | -8.615850e-47 |
Msa0414990 | Msa1350280 | 0.802398 | 5.717966e-49 | -8.615850e-47 |
Msa0416000 | Msa1350280 | 0.806416 | 8.315153e-50 | -8.615850e-47 |
Msa0417630 | Msa1350280 | 0.811732 | 6.043868e-51 | -8.615850e-47 |
Msa0421100 | Msa1350280 | 0.823286 | 1.503169e-53 | -8.615850e-47 |
Msa0423600 | Msa1350280 | 0.820609 | 6.265211e-53 | -8.615850e-47 |
Msa0434630 | Msa1350280 | 0.829443 | 5.134352e-55 | -8.615850e-47 |
Msa0440110 | Msa1350280 | 0.813938 | 1.986492e-51 | -8.615850e-47 |
Msa0446480 | Msa1350280 | 0.815374 | 9.551914e-52 | -8.615850e-47 |
Msa0450460 | Msa1350280 | 0.800378 | 1.482212e-48 | -8.615850e-47 |
Msa0458110 | Msa1350280 | 0.820008 | 8.604992e-53 | -8.615850e-47 |
Msa0458790 | Msa1350280 | 0.827626 | 1.410026e-54 | -8.615850e-47 |
Msa0471090 | Msa1350280 | 0.805231 | 1.474925e-49 | -8.615850e-47 |
Msa0471890 | Msa1350280 | 0.808495 | 3.011835e-50 | -8.615850e-47 |
Msa0475740 | Msa1350280 | 0.840170 | 1.021819e-57 | -8.615850e-47 |
Msa0476150 | Msa1350280 | 0.838397 | 2.946550e-57 | -8.615850e-47 |
Msa0476180 | Msa1350280 | 0.863163 | 3.028106e-64 | -8.615850e-47 |
Msa0479790 | Msa1350280 | 0.803728 | 3.035442e-49 | -8.615850e-47 |
Msa0988790 | Msa1350280 | 0.800843 | 1.191868e-48 | -8.615850e-47 |
Msa1000470 | Msa1350280 | 0.872592 | 2.824368e-67 | -8.615850e-47 |
Msa1002980 | Msa1350280 | 0.809715 | 1.650154e-50 | -8.615850e-47 |
Msa1014350 | Msa1350280 | 0.800410 | 1.459935e-48 | -8.615850e-47 |
Msa1016110 | Msa1350280 | 0.837541 | 4.890060e-57 | -8.615850e-47 |
Msa1024140 | Msa1350280 | 0.815294 | 9.949596e-52 | -8.615850e-47 |
Msa1028210 | Msa1350280 | 0.824996 | 5.963707e-54 | -8.615850e-47 |
Msa1028460 | Msa1350280 | 0.826461 | 2.679113e-54 | -8.615850e-47 |
Msa1029320 | Msa1350280 | 0.804165 | 2.462262e-49 | -8.615850e-47 |
Msa1033160 | Msa1350280 | 0.816753 | 4.699529e-52 | -8.615850e-47 |
Msa1038320 | Msa1350280 | 0.805585 | 1.243596e-49 | -8.615850e-47 |
Msa1044040 | Msa1350280 | 0.837957 | 3.823835e-57 | -8.615850e-47 |
Msa1055360 | Msa1350280 | 0.858432 | 8.271535e-63 | -8.615850e-47 |
Msa1067710 | Msa1350280 | 0.812285 | 4.577986e-51 | -8.615850e-47 |
Msa1070900 | Msa1350280 | 0.813539 | 2.431934e-51 | -8.615850e-47 |
Msa1074630 | Msa1350280 | 0.801320 | 9.520786e-49 | -8.615850e-47 |
Msa1080620 | Msa1350280 | 0.814564 | 1.445139e-51 | -8.615850e-47 |
Msa1080690 | Msa1350280 | 0.814713 | 1.338982e-51 | -8.615850e-47 |
Msa1080840 | Msa1350280 | 0.806140 | 9.505121e-50 | -8.615850e-47 |
Msa1081700 | Msa1350280 | 0.846068 | 2.739565e-59 | -8.615850e-47 |
Msa1081850 | Msa1350280 | 0.816711 | 4.804381e-52 | -8.615850e-47 |
Msa1084490 | Msa1350280 | 0.833521 | 5.084051e-56 | -8.615850e-47 |
Msa1090230 | Msa1350280 | 0.823265 | 1.520146e-53 | -8.615850e-47 |
Msa1093390 | Msa1350280 | 0.838407 | 2.929428e-57 | -8.615850e-47 |
Msa1105290 | Msa1350280 | 0.808373 | 3.197644e-50 | -8.615850e-47 |
Msa0251140 | Msa1350280 | 0.810121 | 1.349421e-50 | -8.615850e-47 |
Msa0258380 | Msa1350280 | 0.807764 | 4.310762e-50 | -8.615850e-47 |
Msa0267120 | Msa1350280 | 0.815447 | 9.201628e-52 | -8.615850e-47 |
Msa0269830 | Msa1350280 | 0.806985 | 6.304869e-50 | -8.615850e-47 |
Msa0277250 | Msa1350280 | 0.812046 | 5.163558e-51 | -8.615850e-47 |
Msa0280140 | Msa1350280 | 0.820313 | 7.327060e-53 | -8.615850e-47 |
Msa0282860 | Msa1350280 | 0.818999 | 1.461771e-52 | -8.615850e-47 |
Msa0296610 | Msa1350280 | 0.849585 | 2.942727e-60 | -8.615850e-47 |
Msa0308430 | Msa1350280 | 0.812571 | 3.965274e-51 | -8.615850e-47 |
Msa0312780 | Msa1350280 | 0.824878 | 6.357580e-54 | -8.615850e-47 |
Msa0333900 | Msa1350280 | 0.817971 | 2.499590e-52 | -8.615850e-47 |
Msa0334020 | Msa1350280 | 0.811755 | 5.973895e-51 | -8.615850e-47 |
Msa0334980 | Msa1350280 | 0.826209 | 3.076322e-54 | -8.615850e-47 |
Msa0362840 | Msa1350280 | 0.805024 | 1.629617e-49 | -8.615850e-47 |
Msa1107970 | Msa1350280 | 0.819411 | 1.177826e-52 | -8.615850e-47 |
Msa1111670 | Msa1350280 | 0.815371 | 9.567864e-52 | -8.615850e-47 |
Msa1118980 | Msa1350280 | 0.803806 | 2.924583e-49 | -8.615850e-47 |
Msa1122510 | Msa1350280 | 0.816575 | 5.152425e-52 | -8.615850e-47 |
Msa1125780 | Msa1350280 | 0.804868 | 1.756818e-49 | -8.615850e-47 |
Msa1125950 | Msa1350280 | 0.806878 | 6.643039e-50 | -8.615850e-47 |
Msa1128350 | Msa1350280 | 0.819012 | 1.451816e-52 | -8.615850e-47 |
Msa1130650 | Msa1350280 | 0.837529 | 4.926842e-57 | -8.615850e-47 |
Msa1130730 | Msa1350280 | 0.801343 | 9.416800e-49 | -8.615850e-47 |
Msa1140010 | Msa1350280 | 0.847183 | 1.358280e-59 | -8.615850e-47 |
Msa1144950 | Msa1350280 | 0.803960 | 2.716364e-49 | -8.615850e-47 |
Msa1145370 | Msa1350280 | 0.808378 | 3.189690e-50 | -8.615850e-47 |
Msa1148780 | Msa1350280 | 0.803268 | 3.780690e-49 | -8.615850e-47 |
Msa1151120 | Msa1350280 | 0.802821 | 4.676473e-49 | -8.615850e-47 |
Msa1151960 | Msa1350280 | 0.818287 | 2.120301e-52 | -8.615850e-47 |
Msa1161160 | Msa1350280 | 0.828160 | 1.049193e-54 | -8.615850e-47 |
Msa1161520 | Msa1350280 | 0.811217 | 7.818940e-51 | -8.615850e-47 |
Msa1161760 | Msa1350280 | 0.817325 | 3.496868e-52 | -8.615850e-47 |
Msa1166180 | Msa1350280 | 0.831758 | 1.392107e-55 | -8.615850e-47 |
Msa1166280 | Msa1350280 | 0.831363 | 1.741510e-55 | -8.615850e-47 |
Msa1171340 | Msa1350280 | 0.806101 | 9.688145e-50 | -8.615850e-47 |
Msa1178970 | Msa1350280 | 0.806412 | 8.331245e-50 | -8.615850e-47 |
Msa1180410 | Msa1350280 | 0.801929 | 7.141203e-49 | -8.615850e-47 |
Msa1183390 | Msa1350280 | 0.824634 | 7.256888e-54 | -8.615850e-47 |
Msa1190910 | Msa1350280 | 0.815256 | 1.014746e-51 | -8.615850e-47 |
Msa1206440 | Msa1350280 | 0.801377 | 9.265834e-49 | -8.615850e-47 |
Msa1208250 | Msa1350280 | 0.818173 | 2.250044e-52 | -8.615850e-47 |
Msa1212740 | Msa1350280 | 0.807103 | 5.953596e-50 | -8.615850e-47 |
Msa1214900 | Msa1350280 | 0.854171 | 1.470397e-61 | -8.615850e-47 |
Msa1218720 | Msa1350280 | 0.802748 | 4.842026e-49 | -8.615850e-47 |
Msa1222390 | Msa1350280 | 0.831550 | 1.566711e-55 | -8.615850e-47 |
Msa1222580 | Msa1350280 | 0.848518 | 5.824363e-60 | -8.615850e-47 |
Msa0504730 | Msa1350280 | 0.826726 | 2.315896e-54 | -8.615850e-47 |
Msa0505390 | Msa1350280 | 0.828203 | 1.024451e-54 | -8.615850e-47 |
Msa0510410 | Msa1350280 | 0.808332 | 3.263073e-50 | -8.615850e-47 |
Msa0511890 | Msa1350280 | 0.820718 | 5.914924e-53 | -8.615850e-47 |
Msa0512130 | Msa1350280 | 0.806061 | 9.874352e-50 | -8.615850e-47 |
Msa0524050 | Msa1350280 | 0.828163 | 1.047307e-54 | -8.615850e-47 |
Msa0524510 | Msa1350280 | 0.816267 | 6.038006e-52 | -8.615850e-47 |
Msa0525240 | Msa1350280 | 0.827533 | 1.484385e-54 | -8.615850e-47 |
Msa0528740 | Msa1350280 | 0.827574 | 1.451188e-54 | -8.615850e-47 |
Msa0530930 | Msa1350280 | 0.822403 | 2.413548e-53 | -8.615850e-47 |
Msa0534380 | Msa1350280 | 0.800049 | 1.729032e-48 | -8.615850e-47 |
Msa0539320 | Msa1350280 | 0.819605 | 1.064088e-52 | -8.615850e-47 |
Msa0542040 | Msa1350280 | 0.850215 | 1.960854e-60 | -8.615850e-47 |
Msa0546380 | Msa1350280 | 0.804215 | 2.403502e-49 | -8.615850e-47 |
Msa0549740 | Msa1350280 | 0.811109 | 8.253653e-51 | -8.615850e-47 |
Msa0550720 | Msa1350280 | 0.824893 | 6.307685e-54 | -8.615850e-47 |
Msa0553230 | Msa1350280 | 0.849798 | 2.565081e-60 | -8.615850e-47 |
Msa0553520 | Msa1350280 | 0.840054 | 1.095313e-57 | -8.615850e-47 |
Msa0554170 | Msa1350280 | 0.829628 | 4.628399e-55 | -8.615850e-47 |
Msa0555980 | Msa1350280 | 0.854821 | 9.532785e-62 | -8.615850e-47 |
Msa0558890 | Msa1350280 | 0.804693 | 1.910966e-49 | -8.615850e-47 |
Msa0567290 | Msa1350280 | 0.813043 | 3.124728e-51 | -8.615850e-47 |
Msa0568120 | Msa1350280 | 0.819168 | 1.338315e-52 | -8.615850e-47 |
Msa0570490 | Msa1350280 | 0.817240 | 3.654686e-52 | -8.615850e-47 |
Msa0572820 | Msa1350280 | 0.814805 | 1.277716e-51 | -8.615850e-47 |
Msa0573970 | Msa1350280 | 0.800760 | 1.238835e-48 | -8.615850e-47 |
Msa0574170 | Msa1350280 | 0.831034 | 2.097563e-55 | -8.615850e-47 |
Msa0575450 | Msa1350280 | 0.802182 | 6.334754e-49 | -8.615850e-47 |
Msa0575460 | Msa1350280 | 0.802002 | 6.896225e-49 | -8.615850e-47 |
Msa0576420 | Msa1350280 | 0.826927 | 2.073797e-54 | -8.615850e-47 |
Msa0577230 | Msa1350280 | 0.811722 | 6.074357e-51 | -8.615850e-47 |
Msa0579610 | Msa1350280 | 0.831828 | 1.337973e-55 | -8.615850e-47 |
Msa0583930 | Msa1350280 | 0.861630 | 8.965341e-64 | -8.615850e-47 |
Msa0583940 | Msa1350280 | 0.840640 | 7.697150e-58 | -8.615850e-47 |
Msa0587900 | Msa1350280 | 0.826268 | 2.978373e-54 | -8.615850e-47 |
Msa0589290 | Msa1350280 | 0.822143 | 2.773003e-53 | -8.615850e-47 |
Msa0595780 | Msa1350280 | 0.819549 | 1.095517e-52 | -8.615850e-47 |
Msa0598250 | Msa1350280 | 0.804191 | 2.431557e-49 | -8.615850e-47 |
Msa0846640 | Msa1350280 | 0.805558 | 1.259715e-49 | -8.615850e-47 |
Msa0848360 | Msa1350280 | 0.830204 | 3.350221e-55 | -8.615850e-47 |
Msa0848380 | Msa1350280 | 0.837367 | 5.421382e-57 | -8.615850e-47 |
Msa0851740 | Msa1350280 | 0.811055 | 8.476033e-51 | -8.615850e-47 |
Msa0855020 | Msa1350280 | 0.824747 | 6.826143e-54 | -8.615850e-47 |
Msa0863250 | Msa1350280 | 0.825487 | 4.562964e-54 | -8.615850e-47 |
Msa0864150 | Msa1350280 | 0.806956 | 6.393137e-50 | -8.615850e-47 |
Msa0881050 | Msa1350280 | 0.832537 | 8.931483e-56 | -8.615850e-47 |
Msa0890250 | Msa1350280 | 0.818633 | 1.770806e-52 | -8.615850e-47 |
Msa0899700 | Msa1350280 | 0.826951 | 2.045898e-54 | -8.615850e-47 |
Msa0901140 | Msa1350280 | 0.801254 | 9.819602e-49 | -8.615850e-47 |
Msa0925160 | Msa1350280 | 0.821757 | 3.407981e-53 | -8.615850e-47 |
Msa0929400 | Msa1350280 | 0.810794 | 9.655325e-51 | -8.615850e-47 |
Msa0931730 | Msa1350280 | 0.846540 | 2.036574e-59 | -8.615850e-47 |
Msa0937940 | Msa1350280 | 0.811238 | 7.735047e-51 | -8.615850e-47 |
Msa0955260 | Msa1350280 | 0.820584 | 6.348403e-53 | -8.615850e-47 |
Msa0964680 | Msa1350280 | 0.812306 | 4.530969e-51 | -8.615850e-47 |
Msa0968450 | Msa1350280 | 0.812433 | 4.250557e-51 | -8.615850e-47 |
Msa0975080 | Msa1350280 | 0.839946 | 1.168820e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350280 | MtrunA17_Chr6g0464561 | 92.517 | 294 | 5 | 1 | 1 | 294 | 1 | 277 | 0.0 | 556 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350280 | AT1G76730.1 | 68.317 | 303 | 82 | 3 | 6 | 294 | 2 | 304 | 9.70e-144 | 408 |
Find 79 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGTAGATCTTATTGTTAT+TGG | 0.152589 | tig0011297:-1835 | Msa1350280:CDS |
GTCAGATTTCTCACTCTTTC+AGG | 0.185200 | tig0011297:-2389 | Msa1350280:intron |
TAATGCTTGTGTTTCCATTT+TGG | 0.190013 | tig0011297:+4883 | Msa1350280:intergenic |
AAGAGAAGCACCAACAAAAT+TGG | 0.213905 | tig0011297:+4550 | Msa1350280:intergenic |
TCCGTTGGTGTTGCGAAATA+TGG | 0.223288 | tig0011297:-1886 | Msa1350280:CDS |
ATATGGTATGTTGCGTTATA+TGG | 0.257841 | tig0011297:-1131 | Msa1350280:CDS |
GGGTAATTAGAAAGAGGATA+TGG | 0.271179 | tig0011297:-4631 | Msa1350280:CDS |
ACTGGTTTCTGAGGAGAATC+TGG | 0.301941 | tig0011297:+2410 | Msa1350280:intergenic |
AATCACCAACCTTGAGGCTT+TGG | 0.321636 | tig0011297:+594 | Msa1350280:intergenic |
AAAGAGGATATGGGATTTGA+TGG | 0.331100 | tig0011297:-4621 | Msa1350280:CDS |
ATTACCCATTTCCAAGCTTT+CGG | 0.338820 | tig0011297:+4647 | Msa1350280:intergenic |
CCTAATCGAGCACCTGTGTT+CGG | 0.356783 | tig0011297:+1796 | Msa1350280:intergenic |
GGATTTGCAGAACTTGAATA+TGG | 0.362270 | tig0011297:-1148 | Msa1350280:CDS |
CCGAACACAGGTGCTCGATT+AGG | 0.365280 | tig0011297:-1796 | Msa1350280:CDS |
GGCTTCCAGTTTGAAGGAAA+TGG | 0.367561 | tig0011297:+4796 | Msa1350280:intergenic |
AACTTCCATTTCCTTCAAAC+TGG | 0.371052 | tig0011297:-4801 | Msa1350280:CDS |
TGCTTCTCTTGCTGCTGATA+AGG | 0.375669 | tig0011297:-4537 | Msa1350280:intron |
ATGATCCGAAAGCTTGGAAA+TGG | 0.380398 | tig0011297:-4652 | Msa1350280:CDS |
CTTCAATGAGGCTGCTTTCG+AGG | 0.380498 | tig0011297:-4747 | Msa1350280:CDS |
CGAACACAGGTGCTCGATTA+GGG | 0.393323 | tig0011297:-1795 | Msa1350280:CDS |
GGAAGTACATGCTTCTTTGA+TGG | 0.394036 | tig0011297:+1906 | Msa1350280:intergenic |
GCGAAATATGGACGACCAAT+TGG | 0.398720 | tig0011297:-1874 | Msa1350280:CDS |
AGCTTTGTTGTTGCTGCTGT+TGG | 0.404430 | tig0011297:+4772 | Msa1350280:intergenic |
CTAATCGAGCACCTGTGTTC+GGG | 0.407200 | tig0011297:+1797 | Msa1350280:intergenic |
TTGGGAATCCTATGATGAAC+AGG | 0.421187 | tig0011297:+4569 | Msa1350280:intergenic |
CTCGAAAGCAGCCTCATTGA+AGG | 0.427405 | tig0011297:+4748 | Msa1350280:intergenic |
GTGGAGAGAGAGCGGTAAAG+AGG | 0.427620 | tig0011297:+4833 | Msa1350280:intergenic |
CAACCTTGAGGCTTTGGAAT+GGG | 0.440113 | tig0011297:+600 | Msa1350280:intergenic |
TAAAGAGGAGAGAGAGTGAA+TGG | 0.446819 | tig0011297:+4848 | Msa1350280:intergenic |
TTTGTTGTTGCTGCTGTTGG+TGG | 0.449518 | tig0011297:+4775 | Msa1350280:intergenic |
CGAGTCAAATATGTTAACTT+CGG | 0.457819 | tig0011297:-1932 | Msa1350280:CDS |
AGAGAAGCACCAACAAAATT+GGG | 0.460491 | tig0011297:+4551 | Msa1350280:intergenic |
TGCAGGATGATCCGAAAGCT+TGG | 0.462695 | tig0011297:-4658 | Msa1350280:CDS |
TCGTCAAGCAATGGCGGCTG+AGG | 0.472670 | tig0011297:-4696 | Msa1350280:CDS |
CTGGAATGTCATCCACCAAT+TGG | 0.474668 | tig0011297:+697 | Msa1350280:intergenic |
ATCCTAGACCTGTTCATCAT+AGG | 0.476390 | tig0011297:-4577 | Msa1350280:CDS |
GAGTCAAATATGTTAACTTC+GGG | 0.482226 | tig0011297:-1931 | Msa1350280:CDS |
GTTGGTGGCTTCCAGTTTGA+AGG | 0.487780 | tig0011297:+4790 | Msa1350280:intergenic |
GGTAATTAGAAAGAGGATAT+GGG | 0.487874 | tig0011297:-4630 | Msa1350280:CDS |
AAATGGAAACACAAGCATTA+CGG | 0.488225 | tig0011297:-4880 | Msa1350280:CDS |
TACAGTGCATGACTGCCAAT+TGG | 0.497413 | tig0011297:-712 | Msa1350280:intron |
ATCCTATGATGAACAGGTCT+AGG | 0.500568 | tig0011297:+4575 | Msa1350280:intergenic |
TTGAAGGAAATGGAAGTTTG+TGG | 0.503108 | tig0011297:+4806 | Msa1350280:intergenic |
CCTCAACCACGGCTGAGGAC+AGG | 0.514670 | tig0011297:-1970 | Msa1350280:CDS |
AGGATATGGGATTTGATGGA+AGG | 0.523046 | tig0011297:-4617 | Msa1350280:CDS |
TATCATTTGTACTCCAACTC+AGG | 0.528489 | tig0011297:-640 | Msa1350280:CDS |
CCTGTCCTCAGCCGTGGTTG+AGG | 0.530300 | tig0011297:+1970 | Msa1350280:intergenic |
TATGGTATGTTGCGTTATAT+GGG | 0.539407 | tig0011297:-1130 | Msa1350280:CDS |
TTGACGAGCTTCTGCGTCGA+GGG | 0.540381 | tig0011297:+4712 | Msa1350280:intergenic |
GGAAATGGGTAATTAGAAAG+AGG | 0.540500 | tig0011297:-4637 | Msa1350280:CDS |
CGCAGAAGCTCGTCAAGCAA+TGG | 0.541437 | tig0011297:-4705 | Msa1350280:CDS |
TCAAGCAATGGCGGCTGAGG+AGG | 0.541965 | tig0011297:-4693 | Msa1350280:CDS |
CCAACCTTGAGGCTTTGGAA+TGG | 0.543089 | tig0011297:+599 | Msa1350280:intergenic |
GGATATGGGATTTGATGGAA+GGG | 0.547035 | tig0011297:-4616 | Msa1350280:CDS |
TCCATATTTCGCAACACCAA+CGG | 0.547570 | tig0011297:+1885 | Msa1350280:intergenic |
TGATCCGAAAGCTTGGAAAT+GGG | 0.548936 | tig0011297:-4651 | Msa1350280:CDS |
GGAGGAGAAATCTTCGATGC+AGG | 0.555243 | tig0011297:-4675 | Msa1350280:CDS |
TGATATCCACTGGTACATCA+TGG | 0.558591 | tig0011297:+658 | Msa1350280:intergenic |
TCAACACTAGTTGTTACCTC+AGG | 0.563225 | tig0011297:-1094 | Msa1350280:intron |
AGAAATCTGACTGGTTTCTG+AGG | 0.564322 | tig0011297:+2401 | Msa1350280:intergenic |
CACAGGTGCTCGATTAGGGA+AGG | 0.566988 | tig0011297:-1791 | Msa1350280:CDS |
TAACTCCTCAACCACGGCTG+AGG | 0.589739 | tig0011297:-1975 | Msa1350280:CDS |
CCGCGATTCACAATGTGTGA+AGG | 0.598088 | tig0011297:-2438 | Msa1350280:CDS |
AAAGAAGCATGTACTTCCGT+TGG | 0.601567 | tig0011297:-1901 | Msa1350280:CDS |
CAATGAGGCTGCTTTCGAGG+CGG | 0.604639 | tig0011297:-4744 | Msa1350280:CDS |
GAAAGAGTGAGAAATCTGAC+TGG | 0.604823 | tig0011297:+2392 | Msa1350280:intergenic |
AGTGCATGACTGCCAATTGG+TGG | 0.605351 | tig0011297:-709 | Msa1350280:CDS |
GGAGTACAAATGATATCCAC+TGG | 0.606295 | tig0011297:+648 | Msa1350280:intergenic |
AGAAGCTCGTCAAGCAATGG+CGG | 0.610408 | tig0011297:-4702 | Msa1350280:CDS |
TGCTCGATTAGGGAAGGGAG+AGG | 0.625890 | tig0011297:-1785 | Msa1350280:intron |
CAACAAAGCTTCCTTCAATG+AGG | 0.627995 | tig0011297:-4759 | Msa1350280:CDS |
CCTTCACACATTGTGAATCG+CGG | 0.649876 | tig0011297:+2438 | Msa1350280:intergenic |
ACAGGTGCTCGATTAGGGAA+GGG | 0.651236 | tig0011297:-1790 | Msa1350280:CDS |
ACACCCATTCCAAAGCCTCA+AGG | 0.655331 | tig0011297:-603 | None:intergenic |
GTTAATCCATGATGTACCAG+TGG | 0.657623 | tig0011297:-664 | Msa1350280:CDS |
AGGCTGCTTTCGAGGCGGAG+CGG | 0.662213 | tig0011297:-4739 | Msa1350280:CDS |
ATTGGTGGATGACATTCCAG+TGG | 0.676960 | tig0011297:-694 | Msa1350280:CDS |
GTTGCTGTTGACCCGAACAC+AGG | 0.678637 | tig0011297:-1808 | Msa1350280:CDS |
AGTTGTTAACTCCTCAACCA+CGG | 0.712250 | tig0011297:-1981 | Msa1350280:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAGGTAAAAAATATTATTT+TGG | - | tig0011297:4523-4542 | Msa1350280:intron | 10.0% |
!! | AAAATGTAATAGACTAATAT+GGG | - | tig0011297:1431-1450 | Msa1350280:intron | 15.0% |
!!! | TTTTACTTTTGTAAATTTAG+AGG | - | tig0011297:1959-1978 | Msa1350280:CDS | 15.0% |
!! | AAAATTAAAAGAGAATCTAA+AGG | + | tig0011297:3465-3484 | Msa1350280:intergenic | 15.0% |
!! | ATTAAGTTAAATTGTAGAAT+CGG | - | tig0011297:3839-3858 | Msa1350280:intron | 15.0% |
!! | TAATTTCTATGGTATAAAAT+AGG | + | tig0011297:4028-4047 | Msa1350280:intergenic | 15.0% |
!! | TTTATAATATTTAAACAAGC+AGG | + | tig0011297:4185-4204 | Msa1350280:intergenic | 15.0% |
!! | CTTATAATATCTTAGAATTT+GGG | + | tig0011297:4610-4629 | Msa1350280:intergenic | 15.0% |
!! | TCTTATAATATCTTAGAATT+TGG | + | tig0011297:4611-4630 | Msa1350280:intergenic | 15.0% |
!! | CTGCATTATTATTATTAAGT+GGG | + | tig0011297:1010-1029 | Msa1350280:intergenic | 20.0% |
!! | TCTGCATTATTATTATTAAG+TGG | + | tig0011297:1011-1030 | Msa1350280:intergenic | 20.0% |
!!! | TAGTCTATTACATTTTGATA+TGG | + | tig0011297:1427-1446 | Msa1350280:intergenic | 20.0% |
!! | CAAAATGTAATAGACTAATA+TGG | - | tig0011297:1430-1449 | Msa1350280:intron | 20.0% |
!!! | AATATGGGTTAATTTTTTGT+TGG | - | tig0011297:1446-1465 | Msa1350280:intron | 20.0% |
!!! | ATTTTTTGTTGGAACTAAAT+TGG | - | tig0011297:1457-1476 | Msa1350280:intron | 20.0% |
!!! | TTTTTTGTTGGAACTAAATT+GGG | - | tig0011297:1458-1477 | Msa1350280:intron | 20.0% |
!!! | TGAACTTATAATAGTTGATA+TGG | + | tig0011297:1518-1537 | Msa1350280:intergenic | 20.0% |
!! | TACTATACAGATTTATCAAA+TGG | + | tig0011297:1587-1606 | Msa1350280:intergenic | 20.0% |
!!! | ATCATCATAGACTTTTATAT+TGG | + | tig0011297:1693-1712 | Msa1350280:intergenic | 20.0% |
!! | TTATTGAATTATAACTGTCT+CGG | - | tig0011297:2831-2850 | Msa1350280:intron | 20.0% |
!! | ACTTAGAAATAAAATCAACA+AGG | + | tig0011297:3222-3241 | Msa1350280:intergenic | 20.0% |
!! | AAAGTAGATCTTATTGTTAT+TGG | - | tig0011297:3658-3677 | Msa1350280:intron | 20.0% |
!!! | GATTCTACAATTTAACTTAA+TGG | + | tig0011297:3840-3859 | Msa1350280:intergenic | 20.0% |
!! | ATAAGAATGAGTAATTTCTA+TGG | + | tig0011297:4039-4058 | Msa1350280:intergenic | 20.0% |
!! | ATTATTCTCTAACATCTAAT+AGG | - | tig0011297:4505-4524 | Msa1350280:intron | 20.0% |
! | GTTTCAAGAAATTATAACTG+TGG | - | tig0011297:1065-1084 | Msa1350280:intron | 25.0% |
!! | AGTCATTGACATTTTTATAC+TGG | - | tig0011297:1354-1373 | Msa1350280:intron | 25.0% |
!!! | TCTATTACATTTTGATATGG+AGG | + | tig0011297:1424-1443 | Msa1350280:intergenic | 25.0% |
! | TTACAAAACCAACTTGTATA+AGG | + | tig0011297:1659-1678 | Msa1350280:intergenic | 25.0% |
! | AGCAATATCTAATCAAATGT+AGG | + | tig0011297:1784-1803 | Msa1350280:intergenic | 25.0% |
!! | ATTTAAGGCTCTTAACTATT+GGG | + | tig0011297:1858-1877 | Msa1350280:intergenic | 25.0% |
!! | TATTTAAGGCTCTTAACTAT+TGG | + | tig0011297:1859-1878 | Msa1350280:intergenic | 25.0% |
! | ATAGTTAAGAGCCTTAAATA+TGG | - | tig0011297:1859-1878 | Msa1350280:CDS | 25.0% |
!! | CATTTTCTGAACCATATTTA+AGG | + | tig0011297:1873-1892 | Msa1350280:intergenic | 25.0% |
! | TAATCAATAACATGTTCAGA+TGG | + | tig0011297:1900-1919 | Msa1350280:intergenic | 25.0% |
! | GTAAATCATTACTTTCGTTT+CGG | + | tig0011297:2007-2026 | Msa1350280:intergenic | 25.0% |
! | ATTTGGATAACATGTATAAC+AGG | + | tig0011297:2092-2111 | Msa1350280:intergenic | 25.0% |
!! | GTTATCCAAATCGTATATTT+TGG | - | tig0011297:2101-2120 | Msa1350280:intron | 25.0% |
! | TTCAACCAAAATATACGATT+TGG | + | tig0011297:2109-2128 | Msa1350280:intergenic | 25.0% |
! | ACATTAGATGTAACAGAAAT+TGG | - | tig0011297:2224-2243 | Msa1350280:intron | 25.0% |
! | AGATTAATAACCAATCTGAA+AGG | + | tig0011297:2379-2398 | Msa1350280:intergenic | 25.0% |
!! | TTTTCTGTTTGAAAACTGAT+GGG | - | tig0011297:2696-2715 | Msa1350280:intron | 25.0% |
!!! | CATCTTTTTTGGTGAAATTT+TGG | - | tig0011297:2935-2954 | Msa1350280:intron | 25.0% |
!!! | TTTTTTGGTGAAATTTTGGT+AGG | - | tig0011297:2939-2958 | Msa1350280:intron | 25.0% |
!!! | TTTTTGGTGAAATTTTGGTA+GGG | - | tig0011297:2940-2959 | Msa1350280:intron | 25.0% |
! | CGCTAATAAAAATCAAATTG+TGG | + | tig0011297:3246-3265 | Msa1350280:intergenic | 25.0% |
! | TTATTAGCGTTAGTAGATAT+AGG | - | tig0011297:3257-3276 | Msa1350280:intron | 25.0% |
! | TCTAAAGGAGAAGAAAAAAA+GGG | + | tig0011297:3450-3469 | Msa1350280:intergenic | 25.0% |
! | ATCTAAAGGAGAAGAAAAAA+AGG | + | tig0011297:3451-3470 | Msa1350280:intergenic | 25.0% |
!! | ATCTTTTCATCTAATCCAAT+TGG | + | tig0011297:3637-3656 | Msa1350280:intergenic | 25.0% |
! | GATTGATTAAACATAACCAT+AGG | + | tig0011297:3758-3777 | Msa1350280:intergenic | 25.0% |
!! | TTTTCCTGTTATTCATCAAA+AGG | - | tig0011297:3786-3805 | Msa1350280:intron | 25.0% |
!! | CCAAGAAAAATTGAACTTTT+AGG | + | tig0011297:3967-3986 | Msa1350280:intergenic | 25.0% |
!! | CCTAAAAGTTCAATTTTTCT+TGG | - | tig0011297:3964-3983 | Msa1350280:intron | 25.0% |
! | CAACTATTCTCTACAATAAA+AGG | + | tig0011297:4265-4284 | Msa1350280:intergenic | 25.0% |
! | ATGTGAAAAAGATTAAAGCA+TGG | + | tig0011297:4480-4499 | Msa1350280:intergenic | 25.0% |
! | TAATCAAACATGAACCAAAA+CGG | + | tig0011297:4701-4720 | Msa1350280:intergenic | 25.0% |
! | AATGCTTGTGTTTCCATTTT+GGG | + | tig0011297:612-631 | None:intergenic | 30.0% |
! | TAATGCTTGTGTTTCCATTT+TGG | + | tig0011297:613-632 | None:intergenic | 30.0% |
AAATGGAAACACAAGCATTA+CGG | - | tig0011297:613-632 | Msa1350280:CDS | 30.0% | |
GGTAATTAGAAAGAGGATAT+GGG | - | tig0011297:863-882 | Msa1350280:intron | 30.0% | |
CACTCATCTATTCATTATTG+TGG | + | tig0011297:1103-1122 | Msa1350280:intergenic | 30.0% | |
AAGATCTATGAAGCACATAT+AGG | - | tig0011297:1123-1142 | Msa1350280:CDS | 30.0% | |
AGATCTATGAAGCACATATA+GGG | - | tig0011297:1124-1143 | Msa1350280:CDS | 30.0% | |
TTCAGTGTAATTATATGCGT+CGG | - | tig0011297:1199-1218 | Msa1350280:intron | 30.0% | |
ACTTTGTCCAAGACTAAATT+GGG | + | tig0011297:1321-1340 | Msa1350280:intergenic | 30.0% | |
TACTTTGTCCAAGACTAAAT+TGG | + | tig0011297:1322-1341 | Msa1350280:intergenic | 30.0% | |
CAACTTGTATAAGGTACAAT+AGG | + | tig0011297:1650-1669 | Msa1350280:intergenic | 30.0% | |
CTATTGTACCTTATACAAGT+TGG | - | tig0011297:1648-1667 | Msa1350280:intron | 30.0% | |
! | TGCTTTTGTAGAGTTTAGTT+AGG | - | tig0011297:1827-1846 | Msa1350280:CDS | 30.0% |
!!! | TGAATTTCTTTTTCGAACAG+CGG | - | tig0011297:2125-2144 | Msa1350280:intron | 30.0% |
TCTGTTACATCTAATGTTCA+AGG | + | tig0011297:2221-2240 | Msa1350280:intergenic | 30.0% | |
ACCAAACAGGTTCTTAAAAA+AGG | + | tig0011297:2296-2315 | Msa1350280:intergenic | 30.0% | |
CTTATGGAAAATTTCAAAGC+TGG | + | tig0011297:2402-2421 | Msa1350280:intergenic | 30.0% | |
! | AGTTTTTGCATTTATACTGC+TGG | - | tig0011297:2593-2612 | Msa1350280:intron | 30.0% |
! | GTTTTCTGTTTGAAAACTGA+TGG | - | tig0011297:2695-2714 | Msa1350280:intron | 30.0% |
! | GTCTAGCTTGCATAAAAAAT+GGG | + | tig0011297:2800-2819 | Msa1350280:intergenic | 30.0% |
! | TGTCTAGCTTGCATAAAAAA+TGG | + | tig0011297:2801-2820 | Msa1350280:intergenic | 30.0% |
!!! | TTGTCACTGTTTGTTTTGTT+AGG | - | tig0011297:2879-2898 | Msa1350280:intron | 30.0% |
!!! | TCCTTCTGATTCATCTTTTT+TGG | - | tig0011297:2924-2943 | Msa1350280:intron | 30.0% |
ACCAAAAAAGATGAATCAGA+AGG | + | tig0011297:2928-2947 | Msa1350280:intergenic | 30.0% | |
TAGGAATTAATTGATGTGTG+TGG | - | tig0011297:3000-3019 | Msa1350280:intron | 30.0% | |
AGGAATTAATTGATGTGTGT+GGG | - | tig0011297:3001-3020 | Msa1350280:intron | 30.0% | |
TTTGTGTATGTTGTTGAGTA+GGG | - | tig0011297:3150-3169 | Msa1350280:intron | 30.0% | |
AACAAGGCAAAAATCACAAA+AGG | + | tig0011297:3206-3225 | Msa1350280:intergenic | 30.0% | |
TTACATCAAAATGAGTCACT+GGG | + | tig0011297:3357-3376 | Msa1350280:intergenic | 30.0% | |
TTTACATCAAAATGAGTCAC+TGG | + | tig0011297:3358-3377 | Msa1350280:intergenic | 30.0% | |
TACTATCAATATTGTGCAGA+TGG | - | tig0011297:3484-3503 | Msa1350280:intron | 30.0% | |
CGAGTCAAATATGTTAACTT+CGG | - | tig0011297:3561-3580 | Msa1350280:intron | 30.0% | |
GAGTCAAATATGTTAACTTC+GGG | - | tig0011297:3562-3581 | Msa1350280:intron | 30.0% | |
ATAACCATAGGAGATGTAAA+AGG | + | tig0011297:3746-3765 | Msa1350280:intergenic | 30.0% | |
! | TGATCCTTTTGATGAATAAC+AGG | + | tig0011297:3793-3812 | Msa1350280:intergenic | 30.0% |
TAGGTTAAAAGACCAGTTTA+AGG | + | tig0011297:4009-4028 | Msa1350280:intergenic | 30.0% | |
GTATGATCATAAAACGTATC+CGG | + | tig0011297:4068-4087 | Msa1350280:intergenic | 30.0% | |
TCAAGATCAAAATCCTACTT+AGG | + | tig0011297:4110-4129 | Msa1350280:intergenic | 30.0% | |
GCTTGTGAGATATTAGTTAT+TGG | + | tig0011297:4216-4235 | Msa1350280:intergenic | 30.0% | |
!!! | TTAGTTGATGAATGACCTTT+TGG | - | tig0011297:4287-4306 | Msa1350280:intron | 30.0% |
ATATGGTATGTTGCGTTATA+TGG | - | tig0011297:4362-4381 | Msa1350280:intron | 30.0% | |
TATGGTATGTTGCGTTATAT+GGG | - | tig0011297:4363-4382 | Msa1350280:intron | 30.0% | |
GAAAAAGATTAAAGCATGGA+AGG | + | tig0011297:4476-4495 | Msa1350280:intergenic | 30.0% | |
! | AGCGAAATCTTTTCTTTACA+AGG | - | tig0011297:4644-4663 | Msa1350280:CDS | 30.0% |
!! | AAAGGACATTTTGGTATCTT+CGG | + | tig0011297:4674-4693 | Msa1350280:intergenic | 30.0% |
AATCAAACATGAACCAAAAC+GGG | + | tig0011297:4700-4719 | Msa1350280:intergenic | 30.0% | |
TTTGTAAAAATGACCTGAGT+TGG | + | tig0011297:4869-4888 | Msa1350280:intergenic | 30.0% | |
!! | AATGGAAGTTTGTGGTTTTG+TGG | + | tig0011297:682-701 | Msa1350280:intergenic | 35.0% |
TTGAAGGAAATGGAAGTTTG+TGG | + | tig0011297:690-709 | Msa1350280:intergenic | 35.0% | |
AACTTCCATTTCCTTCAAAC+TGG | - | tig0011297:692-711 | Msa1350280:CDS | 35.0% | |
ATTACCCATTTCCAAGCTTT+CGG | + | tig0011297:849-868 | Msa1350280:intergenic | 35.0% | |
GGAAATGGGTAATTAGAAAG+AGG | - | tig0011297:856-875 | Msa1350280:intron | 35.0% | |
GGGTAATTAGAAAGAGGATA+TGG | - | tig0011297:862-881 | Msa1350280:intron | 35.0% | |
AAAGAGGATATGGGATTTGA+TGG | - | tig0011297:872-891 | Msa1350280:intron | 35.0% | |
! | CATAGGATTCCCAATTTTGT+TGG | - | tig0011297:933-952 | Msa1350280:intron | 35.0% |
!! | AGAGAAGCACCAACAAAATT+GGG | + | tig0011297:945-964 | Msa1350280:intergenic | 35.0% |
!! | AAGAGAAGCACCAACAAAAT+TGG | + | tig0011297:946-965 | Msa1350280:intergenic | 35.0% |
TCTCAAATTATCAGCTGTGT+CGG | + | tig0011297:1168-1187 | Msa1350280:intergenic | 35.0% | |
GTTAGGTGAAGATCAAAATC+TGG | - | tig0011297:1275-1294 | Msa1350280:intron | 35.0% | |
GTATAAGGTACAATAGGTCT+TGG | + | tig0011297:1644-1663 | Msa1350280:intergenic | 35.0% | |
GAGCTTATCTTAGATTCGTT+AGG | - | tig0011297:1717-1736 | Msa1350280:intron | 35.0% | |
ACAGGTTCTTAAAAAAGGCA+TGG | + | tig0011297:2291-2310 | Msa1350280:intergenic | 35.0% | |
!!! | GCCTTTTTTAAGAACCTGTT+TGG | - | tig0011297:2292-2311 | Msa1350280:intron | 35.0% |
TCTAGCGAATTATACCAAAC+AGG | + | tig0011297:2309-2328 | Msa1350280:intergenic | 35.0% | |
ATTCGCTAGAAACATGTAAC+AGG | - | tig0011297:2319-2338 | Msa1350280:intron | 35.0% | |
TGAGAATAGACCTTTCAGAT+TGG | - | tig0011297:2366-2385 | Msa1350280:intron | 35.0% | |
GTACATGGTTGCTTCATTAT+CGG | - | tig0011297:2500-2519 | Msa1350280:intron | 35.0% | |
AGAAAACAGAAATAGAAGCC+TGG | + | tig0011297:2682-2701 | Msa1350280:intergenic | 35.0% | |
TCCATGCTTAGAACATTTGT+AGG | - | tig0011297:2761-2780 | Msa1350280:intron | 35.0% | |
CCATGCTTAGAACATTTGTA+GGG | - | tig0011297:2762-2781 | Msa1350280:intron | 35.0% | |
TGAATCAGAAGGAAGCTTAT+AGG | + | tig0011297:2917-2936 | Msa1350280:intergenic | 35.0% | |
!! | TGTTGCTTGTGATTTTGAGT+AGG | - | tig0011297:2981-3000 | Msa1350280:intron | 35.0% |
! | GGTTAGATAGGTGCTTTATT+TGG | - | tig0011297:3125-3144 | Msa1350280:intron | 35.0% |
GTTTGTGTATGTTGTTGAGT+AGG | - | tig0011297:3149-3168 | Msa1350280:intron | 35.0% | |
CTGAATGTCAGTGATAAGTA+TGG | + | tig0011297:3318-3337 | Msa1350280:intergenic | 35.0% | |
TACATCAAAATGAGTCACTG+GGG | + | tig0011297:3356-3375 | Msa1350280:intergenic | 35.0% | |
! | AACTCCTTTTACATCTCCTA+TGG | - | tig0011297:3739-3758 | Msa1350280:intron | 35.0% |
CTTAACAACACTATTGACGT+AGG | + | tig0011297:3817-3836 | Msa1350280:intergenic | 35.0% | |
ATCTAACTCGCATGTGAAAT+CGG | - | tig0011297:3892-3911 | Msa1350280:intron | 35.0% | |
AATTGCTAAGATTGCGAGAT+TGG | - | tig0011297:3926-3945 | Msa1350280:intron | 35.0% | |
TACTCATTCTTATGCAAGAC+CGG | - | tig0011297:4046-4065 | Msa1350280:intron | 35.0% | |
AAATCCTACTTAGGATCATG+AGG | + | tig0011297:4101-4120 | Msa1350280:intergenic | 35.0% | |
AGTTGAAGTAACAGACCAAA+AGG | + | tig0011297:4305-4324 | Msa1350280:intergenic | 35.0% | |
! | TCTGTTACTTCAACTAAGAG+AGG | - | tig0011297:4310-4329 | Msa1350280:intron | 35.0% |
GGATTTGCAGAACTTGAATA+TGG | - | tig0011297:4345-4364 | Msa1350280:intron | 35.0% | |
GCAAGAATCAAAATTACCTG+AGG | + | tig0011297:4418-4437 | Msa1350280:intergenic | 35.0% | |
TGGCTAAGGAAAAGTTACAA+AGG | + | tig0011297:4440-4459 | Msa1350280:intergenic | 35.0% | |
! | AACGGGATTAAAGGACATTT+TGG | + | tig0011297:4683-4702 | Msa1350280:intergenic | 35.0% |
! | AATGTCCTTTAATCCCGTTT+TGG | - | tig0011297:4684-4703 | Msa1350280:CDS | 35.0% |
ATGAACCAAAACGGGATTAA+AGG | + | tig0011297:4692-4711 | Msa1350280:intergenic | 35.0% | |
TATCATTTGTACTCCAACTC+AGG | - | tig0011297:4853-4872 | Msa1350280:CDS | 35.0% | |
TAAAGAGGAGAGAGAGTGAA+TGG | + | tig0011297:648-667 | Msa1350280:intergenic | 40.0% | |
CAACAAAGCTTCCTTCAATG+AGG | - | tig0011297:734-753 | Msa1350280:intron | 40.0% | |
ATGATCCGAAAGCTTGGAAA+TGG | - | tig0011297:841-860 | Msa1350280:intron | 40.0% | |
TGATCCGAAAGCTTGGAAAT+GGG | - | tig0011297:842-861 | Msa1350280:intron | 40.0% | |
AGGATATGGGATTTGATGGA+AGG | - | tig0011297:876-895 | Msa1350280:intron | 40.0% | |
GGATATGGGATTTGATGGAA+GGG | - | tig0011297:877-896 | Msa1350280:intron | 40.0% | |
ATCCTAGACCTGTTCATCAT+AGG | - | tig0011297:916-935 | Msa1350280:intron | 40.0% | |
ATCCTATGATGAACAGGTCT+AGG | + | tig0011297:921-940 | Msa1350280:intergenic | 40.0% | |
TTGGGAATCCTATGATGAAC+AGG | + | tig0011297:927-946 | Msa1350280:intergenic | 40.0% | |
ATAAGGTATGCTGGTGAATG+TGG | - | tig0011297:973-992 | Msa1350280:intron | 40.0% | |
TTGATCTTCACCTAACTCCT+CGG | + | tig0011297:1271-1290 | Msa1350280:intergenic | 40.0% | |
CTACACGCCTAAGATGATAT+CGG | + | tig0011297:1746-1765 | Msa1350280:intergenic | 40.0% | |
GATATCATCTTAGGCGTGTA+GGG | - | tig0011297:1745-1764 | Msa1350280:intron | 40.0% | |
AAGGCTCTTAACTATTGGGT+TGG | + | tig0011297:1854-1873 | Msa1350280:intergenic | 40.0% | |
GCTTGCTTTCTTTGTGTACA+TGG | - | tig0011297:2485-2504 | Msa1350280:intron | 40.0% | |
!! | AGAAAGTATCACACACTTCC+AGG | - | tig0011297:2620-2639 | Msa1350280:intron | 40.0% |
ACTCTACTGTGTTAAGCCAA+AGG | - | tig0011297:2644-2663 | Msa1350280:intron | 40.0% | |
CAAATCACAATCAAGAGTCC+AGG | - | tig0011297:2725-2744 | Msa1350280:intron | 40.0% | |
ATGGAATACGCTTAACAACC+TGG | + | tig0011297:2746-2765 | Msa1350280:intergenic | 40.0% | |
! | CCCTACAAATGTTCTAAGCA+TGG | + | tig0011297:2765-2784 | Msa1350280:intergenic | 40.0% |
! | TGTGGGTTTTTATGCAGATG+AGG | - | tig0011297:3018-3037 | Msa1350280:intron | 40.0% |
! | GTGGGTTTTTATGCAGATGA+GGG | - | tig0011297:3019-3038 | Msa1350280:intron | 40.0% |
!! | AGAAATCTGACTGGTTTCTG+AGG | + | tig0011297:3095-3114 | Msa1350280:intergenic | 40.0% |
GAAAGAGTGAGAAATCTGAC+TGG | + | tig0011297:3104-3123 | Msa1350280:intergenic | 40.0% | |
GTCAGATTTCTCACTCTTTC+AGG | - | tig0011297:3104-3123 | Msa1350280:intron | 40.0% | |
!! | CTCACTCTTTCAGGTTAGAT+AGG | - | tig0011297:3113-3132 | Msa1350280:intron | 40.0% |
TGTATGTTGTTGAGTAGGGA+GGG | - | tig0011297:3154-3173 | Msa1350280:intron | 40.0% | |
AGTTGTTAACTCCTCAACCA+CGG | - | tig0011297:3512-3531 | Msa1350280:intron | 40.0% | |
! | GGAAGTACATGCTTCTTTGA+TGG | + | tig0011297:3590-3609 | Msa1350280:intergenic | 40.0% |
! | AAAGAAGCATGTACTTCCGT+TGG | - | tig0011297:3592-3611 | Msa1350280:intron | 40.0% |
TCCATATTTCGCAACACCAA+CGG | + | tig0011297:3611-3630 | Msa1350280:intergenic | 40.0% | |
! | CGCTAATCGATTCCTTAAAC+TGG | - | tig0011297:3994-4013 | Msa1350280:intron | 40.0% |
TACTTAGGATCATGAGGAAG+GGG | + | tig0011297:4095-4114 | Msa1350280:intergenic | 40.0% | |
CTACTTAGGATCATGAGGAA+GGG | + | tig0011297:4096-4115 | Msa1350280:intergenic | 40.0% | |
CCTTGAAACAATACTCGTGT+CGG | + | tig0011297:4242-4261 | Msa1350280:intergenic | 40.0% | |
TAAGAGAGGACTAAAGTGCA+GGG | - | tig0011297:4324-4343 | Msa1350280:intron | 40.0% | |
TCAACACTAGTTGTTACCTC+AGG | - | tig0011297:4399-4418 | Msa1350280:intron | 40.0% | |
TTTCCTTAGCCATCTCTCAA+AGG | - | tig0011297:4448-4467 | Msa1350280:intron | 40.0% | |
TGGTTGAACATATTCGAGAG+TGG | - | tig0011297:4543-4562 | Msa1350280:CDS | 40.0% | |
!! | TGTTGTTTCCAGAAACTGAC+TGG | - | tig0011297:4579-4598 | Msa1350280:CDS | 40.0% |
! | TGGATTAACAGCTTTTCCAC+TGG | + | tig0011297:4818-4837 | Msa1350280:intergenic | 40.0% |
GTTAATCCATGATGTACCAG+TGG | - | tig0011297:4829-4848 | Msa1350280:CDS | 40.0% | |
TGATATCCACTGGTACATCA+TGG | + | tig0011297:4838-4857 | Msa1350280:intergenic | 40.0% | |
GGAGTACAAATGATATCCAC+TGG | + | tig0011297:4848-4867 | Msa1350280:intergenic | 40.0% | |
GGCTTCCAGTTTGAAGGAAA+TGG | + | tig0011297:700-719 | Msa1350280:intergenic | 45.0% | |
!! | TTTGTTGTTGCTGCTGTTGG+TGG | + | tig0011297:721-740 | Msa1350280:intergenic | 45.0% |
!! | AGCTTTGTTGTTGCTGCTGT+TGG | + | tig0011297:724-743 | Msa1350280:intergenic | 45.0% |
TGCTTCTCTTGCTGCTGATA+AGG | - | tig0011297:956-975 | Msa1350280:intron | 45.0% | |
TTGCTGCTGATAAGGTATGC+TGG | - | tig0011297:964-983 | Msa1350280:intron | 45.0% | |
CTGGTGAATGTGGTTGGAAT+GGG | - | tig0011297:983-1002 | Msa1350280:intron | 45.0% | |
!! | TATATGCGTCGGTGTTGTGT+CGG | - | tig0011297:1210-1229 | Msa1350280:intron | 45.0% |
! | GATCCCTCACAGTTTTCTCT+CGG | + | tig0011297:1484-1503 | Msa1350280:intergenic | 45.0% |
TAGGCCACCGATATCATCTT+AGG | - | tig0011297:1736-1755 | Msa1350280:intron | 45.0% | |
CGATATCATCTTAGGCGTGT+AGG | - | tig0011297:1744-1763 | Msa1350280:intron | 45.0% | |
CAGCGACAGAGCAAAACTTA+TGG | + | tig0011297:2418-2437 | Msa1350280:intergenic | 45.0% | |
CTGGTCTAGTATCAGACCTT+TGG | + | tig0011297:2663-2682 | Msa1350280:intergenic | 45.0% | |
CAAAGGTCTGATACTAGACC+AGG | - | tig0011297:2661-2680 | Msa1350280:intron | 45.0% | |
!! | AATTTTGGTAGGGCGTGGAA+TGG | - | tig0011297:2950-2969 | Msa1350280:intron | 45.0% |
!! | ATTTTGGTAGGGCGTGGAAT+GGG | - | tig0011297:2951-2970 | Msa1350280:intron | 45.0% |
!! | TTTTATGCAGATGAGGGCGT+TGG | - | tig0011297:3025-3044 | Msa1350280:intron | 45.0% |
CCTTCACACATTGTGAATCG+CGG | + | tig0011297:3058-3077 | Msa1350280:intergenic | 45.0% | |
! | ACTGGTTTCTGAGGAGAATC+TGG | + | tig0011297:3086-3105 | Msa1350280:intergenic | 45.0% |
GTGTATGTTGTTGAGTAGGG+AGG | - | tig0011297:3153-3172 | Msa1350280:intron | 45.0% | |
GTATGTTGTTGAGTAGGGAG+GGG | - | tig0011297:3155-3174 | Msa1350280:intron | 45.0% | |
TATGTTGTTGAGTAGGGAGG+GGG | - | tig0011297:3156-3175 | Msa1350280:intron | 45.0% | |
TAGCAACAGAATGCCATGAG+CGG | - | tig0011297:3283-3302 | Msa1350280:intron | 45.0% | |
!! | TCCGTTGGTGTTGCGAAATA+TGG | - | tig0011297:3607-3626 | Msa1350280:intron | 45.0% |
GCGAAATATGGACGACCAAT+TGG | - | tig0011297:3619-3638 | Msa1350280:intron | 45.0% | |
ACTTAGGATCATGAGGAAGG+GGG | + | tig0011297:4094-4113 | Msa1350280:intergenic | 45.0% | |
CCTACTTAGGATCATGAGGA+AGG | + | tig0011297:4097-4116 | Msa1350280:intergenic | 45.0% | |
CCTTCCTCATGATCCTAAGT+AGG | - | tig0011297:4094-4113 | Msa1350280:intron | 45.0% | |
TCTAAGCAGGATCACAGACA+AGG | + | tig0011297:4136-4155 | Msa1350280:intergenic | 45.0% | |
TGAGGCAGACATTTCTAAGC+AGG | + | tig0011297:4149-4168 | Msa1350280:intergenic | 45.0% | |
! | CCGACACGAGTATTGTTTCA+AGG | - | tig0011297:4239-4258 | Msa1350280:intron | 45.0% |
CTAAGAGAGGACTAAAGTGC+AGG | - | tig0011297:4323-4342 | Msa1350280:intron | 45.0% | |
! | TTTCCAGAAACTGACTGGTC+TGG | - | tig0011297:4584-4603 | Msa1350280:CDS | 45.0% |
TACAGTGCATGACTGCCAAT+TGG | - | tig0011297:4781-4800 | Msa1350280:CDS | 45.0% | |
CTGGAATGTCATCCACCAAT+TGG | + | tig0011297:4799-4818 | Msa1350280:intergenic | 45.0% | |
! | ATTGGTGGATGACATTCCAG+TGG | - | tig0011297:4799-4818 | Msa1350280:CDS | 45.0% |
!!! | GTGGTTTTGTGGAGAGAGAG+CGG | + | tig0011297:671-690 | Msa1350280:intergenic | 50.0% |
!! | GTTGGTGGCTTCCAGTTTGA+AGG | + | tig0011297:706-725 | Msa1350280:intergenic | 50.0% |
CTCGAAAGCAGCCTCATTGA+AGG | + | tig0011297:748-767 | Msa1350280:intergenic | 50.0% | |
! | CTTCAATGAGGCTGCTTTCG+AGG | - | tig0011297:746-765 | Msa1350280:intron | 50.0% |
AGAAGCTCGTCAAGCAATGG+CGG | - | tig0011297:791-810 | Msa1350280:intron | 50.0% | |
GGAGGAGAAATCTTCGATGC+AGG | - | tig0011297:818-837 | Msa1350280:intron | 50.0% | |
TGCAGGATGATCCGAAAGCT+TGG | - | tig0011297:835-854 | Msa1350280:intron | 50.0% | |
GGTATGCTGGTGAATGTGGT+TGG | - | tig0011297:977-996 | Msa1350280:intron | 50.0% | |
GCTGGTGAATGTGGTTGGAA+TGG | - | tig0011297:982-1001 | Msa1350280:intron | 50.0% | |
! | TGTGTCGGCATGTCAGTGTA+TGG | + | tig0011297:1153-1172 | Msa1350280:intergenic | 50.0% |
! | TGGCCCTCACGATTTTCTCT+CGG | - | tig0011297:1295-1314 | Msa1350280:intron | 50.0% |
CTCTCGGCCCAATTTAGTCT+TGG | - | tig0011297:1311-1330 | Msa1350280:intron | 50.0% | |
CACGCCTAAGATGATATCGG+TGG | + | tig0011297:1743-1762 | Msa1350280:intergenic | 50.0% | |
! | GCTTAACACAGTAGAGTGCC+TGG | + | tig0011297:2641-2660 | Msa1350280:intergenic | 50.0% |
!! | GGTGAAATTTTGGTAGGGCG+TGG | - | tig0011297:2945-2964 | Msa1350280:intron | 50.0% |
CCGCGATTCACAATGTGTGA+AGG | - | tig0011297:3055-3074 | Msa1350280:intron | 50.0% | |
AGCAACAGAATGCCATGAGC+GGG | - | tig0011297:3284-3303 | Msa1350280:intron | 50.0% | |
GTCACTGGGGAAGTTGTGTA+TGG | + | tig0011297:3343-3362 | Msa1350280:intergenic | 50.0% | |
AAAAAACCTGTCCTCAGCCG+TGG | + | tig0011297:3532-3551 | Msa1350280:intergenic | 50.0% | |
CTAATCGAGCACCTGTGTTC+GGG | + | tig0011297:3699-3718 | Msa1350280:intergenic | 50.0% | |
CCTAATCGAGCACCTGTGTT+CGG | + | tig0011297:3700-3719 | Msa1350280:intergenic | 50.0% | |
CGAACACAGGTGCTCGATTA+GGG | - | tig0011297:3698-3717 | Msa1350280:intron | 50.0% | |
ACAGGTGCTCGATTAGGGAA+GGG | - | tig0011297:3703-3722 | Msa1350280:intron | 50.0% | |
ATGCGAGTTAGATCGCTCAG+TGG | + | tig0011297:3885-3904 | Msa1350280:intergenic | 50.0% | |
CTTAGGATCATGAGGAAGGG+GGG | + | tig0011297:4093-4112 | Msa1350280:intergenic | 50.0% | |
! | GAGCCTTTGAGAGATGGCTA+AGG | + | tig0011297:4454-4473 | Msa1350280:intergenic | 50.0% |
! | TGGAAGGAGCCTTTGAGAGA+TGG | + | tig0011297:4460-4479 | Msa1350280:intergenic | 50.0% |
AGTGCATGACTGCCAATTGG+TGG | - | tig0011297:4784-4803 | Msa1350280:CDS | 50.0% | |
GTGGAGAGAGAGCGGTAAAG+AGG | + | tig0011297:663-682 | Msa1350280:intergenic | 55.0% | |
! | CAATGAGGCTGCTTTCGAGG+CGG | - | tig0011297:749-768 | Msa1350280:intron | 55.0% |
TTGACGAGCTTCTGCGTCGA+GGG | + | tig0011297:784-803 | Msa1350280:intergenic | 55.0% | |
CGCAGAAGCTCGTCAAGCAA+TGG | - | tig0011297:788-807 | Msa1350280:intron | 55.0% | |
ACACGACACATGTCCGACAC+CGG | - | tig0011297:1239-1258 | Msa1350280:intron | 55.0% | |
GGGCCGAGAGAAAATCGTGA+GGG | + | tig0011297:1301-1320 | Msa1350280:intergenic | 55.0% | |
TGGGCCGAGAGAAAATCGTG+AGG | + | tig0011297:1302-1321 | Msa1350280:intergenic | 55.0% | |
TGGGCCGAGAGAAAACTGTG+AGG | - | tig0011297:1477-1496 | Msa1350280:intron | 55.0% | |
GGGCCGAGAGAAAACTGTGA+GGG | - | tig0011297:1478-1497 | Msa1350280:intron | 55.0% | |
TTGTTGAGTAGGGAGGGGGA+AGG | - | tig0011297:3160-3179 | Msa1350280:intron | 55.0% | |
GCAACAGAATGCCATGAGCG+GGG | - | tig0011297:3285-3304 | Msa1350280:intron | 55.0% | |
CAACAGAATGCCATGAGCGG+GGG | - | tig0011297:3286-3305 | Msa1350280:intron | 55.0% | |
TAACTCCTCAACCACGGCTG+AGG | - | tig0011297:3518-3537 | Msa1350280:intron | 55.0% | |
! | GTTGCTGTTGACCCGAACAC+AGG | - | tig0011297:3685-3704 | Msa1350280:intron | 55.0% |
CCGAACACAGGTGCTCGATT+AGG | - | tig0011297:3697-3716 | Msa1350280:intron | 55.0% | |
CACAGGTGCTCGATTAGGGA+AGG | - | tig0011297:3702-3721 | Msa1350280:intron | 55.0% | |
TGCTCGATTAGGGAAGGGAG+AGG | - | tig0011297:3708-3727 | Msa1350280:intron | 55.0% | |
GCAGGTGAAACAGCATGCTG+AGG | + | tig0011297:4167-4186 | Msa1350280:intergenic | 55.0% | |
CTTGACGAGCTTCTGCGTCG+AGG | + | tig0011297:785-804 | Msa1350280:intergenic | 60.0% | |
TCGTCAAGCAATGGCGGCTG+AGG | - | tig0011297:797-816 | Msa1350280:intron | 60.0% | |
TCAAGCAATGGCGGCTGAGG+AGG | - | tig0011297:800-819 | Msa1350280:intron | 60.0% | |
!! | CGTCGGTGTTGTGTCGGTGT+CGG | - | tig0011297:1216-1235 | Msa1350280:intron | 60.0% |
CACGACACATGTCCGACACC+GGG | - | tig0011297:1240-1259 | Msa1350280:intron | 60.0% | |
ATGGCATTCTCCCCCGCTCA+TGG | + | tig0011297:3299-3318 | Msa1350280:intergenic | 60.0% | |
GGGCCAGACCAGTCAGTTTC+TGG | + | tig0011297:4590-4609 | Msa1350280:intergenic | 60.0% | |
! | AGGCTGCTTTCGAGGCGGAG+CGG | - | tig0011297:754-773 | Msa1350280:intron | 65.0% |
CCTAACTCCTCGGCGTGTCC+CGG | + | tig0011297:1261-1280 | Msa1350280:intergenic | 65.0% | |
CCTGTCCTCAGCCGTGGTTG+AGG | + | tig0011297:3526-3545 | Msa1350280:intergenic | 65.0% | |
CCTCAACCACGGCTGAGGAC+AGG | - | tig0011297:3523-3542 | Msa1350280:intron | 65.0% | |
TCCTCGGCGTGTCCCGGTGT+CGG | + | tig0011297:1255-1274 | Msa1350280:intergenic | 70.0% | |
CCGGGACACGCCGAGGAGTT+AGG | - | tig0011297:1258-1277 | Msa1350280:intron | 70.0% | |
TCCGACACCGGGACACGCCG+AGG | - | tig0011297:1251-1270 | Msa1350280:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0011297 | gene | 605 | 4910 | 605 | ID=Msa1350280;Name=Msa1350280 |
tig0011297 | mRNA | 605 | 4910 | 605 | ID=Msa1350280-mRNA-1;Parent=Msa1350280;Name=Msa1350280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=10|1|0.8|1|1|1|5|0|294 |
tig0011297 | exon | 605 | 729 | 605 | ID=Msa1350280-mRNA-1:exon:7323;Parent=Msa1350280-mRNA-1 |
tig0011297 | exon | 1095 | 1170 | 1095 | ID=Msa1350280-mRNA-1:exon:7322;Parent=Msa1350280-mRNA-1 |
tig0011297 | exon | 1786 | 2012 | 1786 | ID=Msa1350280-mRNA-1:exon:7321;Parent=Msa1350280-mRNA-1 |
tig0011297 | exon | 2390 | 2480 | 2390 | ID=Msa1350280-mRNA-1:exon:7320;Parent=Msa1350280-mRNA-1 |
tig0011297 | exon | 4538 | 4910 | 4538 | ID=Msa1350280-mRNA-1:exon:7319;Parent=Msa1350280-mRNA-1 |
tig0011297 | five_prime_UTR | 4901 | 4910 | 4901 | ID=Msa1350280-mRNA-1:five_prime_utr;Parent=Msa1350280-mRNA-1 |
tig0011297 | CDS | 4538 | 4900 | 4538 | ID=Msa1350280-mRNA-1:cds;Parent=Msa1350280-mRNA-1 |
tig0011297 | CDS | 2390 | 2480 | 2390 | ID=Msa1350280-mRNA-1:cds;Parent=Msa1350280-mRNA-1 |
tig0011297 | CDS | 1786 | 2012 | 1786 | ID=Msa1350280-mRNA-1:cds;Parent=Msa1350280-mRNA-1 |
tig0011297 | CDS | 1095 | 1170 | 1095 | ID=Msa1350280-mRNA-1:cds;Parent=Msa1350280-mRNA-1 |
tig0011297 | CDS | 605 | 729 | 605 | ID=Msa1350280-mRNA-1:cds;Parent=Msa1350280-mRNA-1 |
Gene Sequence |
Protein sequence |