Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277250 | KEH36992.1 | 93.269 | 208 | 14 | 0 | 1 | 208 | 1 | 208 | 2.52e-143 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277250 | sp|Q94B74|NUDT2_ARATH | 64.964 | 137 | 48 | 0 | 71 | 207 | 19 | 155 | 2.86e-63 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277250 | A0A072V5A4 | 93.269 | 208 | 14 | 0 | 1 | 208 | 1 | 208 | 1.20e-143 | 409 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0096020 | Msa0277250 | 0.814388 | 1.580259e-51 | -8.615850e-47 |
| Msa0103060 | Msa0277250 | 0.803522 | 3.348928e-49 | -8.615850e-47 |
| Msa0107460 | Msa0277250 | 0.803399 | 3.551151e-49 | -8.615850e-47 |
| Msa0141550 | Msa0277250 | 0.813044 | 3.123431e-51 | -8.615850e-47 |
| Msa0147990 | Msa0277250 | 0.803731 | 3.030820e-49 | -8.615850e-47 |
| Msa0148430 | Msa0277250 | 0.804817 | 1.800332e-49 | -8.615850e-47 |
| Msa0169960 | Msa0277250 | 0.800561 | 1.360151e-48 | -8.615850e-47 |
| Msa0190980 | Msa0277250 | 0.802566 | 5.278702e-49 | -8.615850e-47 |
| Msa0206600 | Msa0277250 | 0.810763 | 9.803131e-51 | -8.615850e-47 |
| Msa0213080 | Msa0277250 | 0.801400 | 9.165636e-49 | -8.615850e-47 |
| Msa0217470 | Msa0277250 | 0.803521 | 3.350610e-49 | -8.615850e-47 |
| Msa0218860 | Msa0277250 | 0.817765 | 2.782180e-52 | -8.615850e-47 |
| Msa0223960 | Msa0277250 | 0.832191 | 1.088004e-55 | -8.615850e-47 |
| Msa0239610 | Msa0277250 | 0.816704 | 4.821109e-52 | -8.615850e-47 |
| Msa0272420 | Msa0277250 | 0.804708 | 1.897429e-49 | -8.615850e-47 |
| Msa0277250 | Msa0282860 | 0.809404 | 1.924177e-50 | -8.615850e-47 |
| Msa0277250 | Msa0323630 | 0.806006 | 1.014386e-49 | -8.615850e-47 |
| Msa0277250 | Msa0353900 | 0.800448 | 1.434770e-48 | -8.615850e-47 |
| Msa0277250 | Msa0380430 | 0.835145 | 1.989903e-56 | -8.615850e-47 |
| Msa0277250 | Msa0393140 | 0.812620 | 3.867531e-51 | -8.615850e-47 |
| Msa0277250 | Msa0414070 | 0.822805 | 1.945673e-53 | -8.615850e-47 |
| Msa0277250 | Msa0423110 | 0.809106 | 2.229236e-50 | -8.615850e-47 |
| Msa0277250 | Msa0423600 | 0.812786 | 3.558636e-51 | -8.615850e-47 |
| Msa0277250 | Msa0427050 | 0.804045 | 2.607547e-49 | -8.615850e-47 |
| Msa0277250 | Msa0431830 | 0.800464 | 1.423632e-48 | -8.615850e-47 |
| Msa0277250 | Msa0458790 | 0.808741 | 2.668172e-50 | -8.615850e-47 |
| Msa0277250 | Msa0471890 | 0.801133 | 1.039406e-48 | -8.615850e-47 |
| Msa0277250 | Msa0473450 | 0.804952 | 1.687076e-49 | -8.615850e-47 |
| Msa0277250 | Msa0476180 | 0.821921 | 3.122129e-53 | -8.615850e-47 |
| Msa0277250 | Msa0510410 | 0.812210 | 4.754663e-51 | -8.615850e-47 |
| Msa0277250 | Msa0524050 | 0.808904 | 2.462061e-50 | -8.615850e-47 |
| Msa0277250 | Msa0530930 | 0.801862 | 7.371511e-49 | -8.615850e-47 |
| Msa0277250 | Msa0534380 | 0.806258 | 8.975121e-50 | -8.615850e-47 |
| Msa0277250 | Msa0542040 | 0.800200 | 1.611029e-48 | -8.615850e-47 |
| Msa0277250 | Msa0549740 | 0.810769 | 9.775081e-51 | -8.615850e-47 |
| Msa0277250 | Msa0553230 | 0.805733 | 1.157490e-49 | -8.615850e-47 |
| Msa0277250 | Msa0553520 | 0.806329 | 8.673557e-50 | -8.615850e-47 |
| Msa0277250 | Msa0554170 | 0.833716 | 4.546491e-56 | -8.615850e-47 |
| Msa0277250 | Msa0555980 | 0.808786 | 2.609269e-50 | -8.615850e-47 |
| Msa0277250 | Msa0568120 | 0.800098 | 1.690017e-48 | -8.615850e-47 |
| Msa0277250 | Msa0577230 | 0.815582 | 8.585403e-52 | -8.615850e-47 |
| Msa0277250 | Msa0583930 | 0.800473 | 1.417948e-48 | -8.615850e-47 |
| Msa0277250 | Msa0605230 | 0.835522 | 1.597612e-56 | -8.615850e-47 |
| Msa0277250 | Msa0607300 | 0.822997 | 1.755608e-53 | -8.615850e-47 |
| Msa0277250 | Msa0607440 | 0.805720 | 1.164733e-49 | -8.615850e-47 |
| Msa0277250 | Msa0617370 | 0.813683 | 2.260595e-51 | -8.615850e-47 |
| Msa0277250 | Msa0631340 | 0.804046 | 2.606201e-49 | -8.615850e-47 |
| Msa0277250 | Msa0635350 | 0.800984 | 1.115007e-48 | -8.615850e-47 |
| Msa0277250 | Msa0645780 | 0.806853 | 6.721641e-50 | -8.615850e-47 |
| Msa0277250 | Msa0646390 | 0.822678 | 2.083231e-53 | -8.615850e-47 |
| Msa0277250 | Msa0672350 | 0.803261 | 3.792523e-49 | -8.615850e-47 |
| Msa0277250 | Msa0690350 | 0.817904 | 2.588605e-52 | -8.615850e-47 |
| Msa0277250 | Msa0690720 | 0.810207 | 1.292637e-50 | -8.615850e-47 |
| Msa0277250 | Msa0692910 | 0.822060 | 2.898267e-53 | -8.615850e-47 |
| Msa0277250 | Msa0707780 | 0.801606 | 8.319332e-49 | -8.615850e-47 |
| Msa0277250 | Msa0712440 | 0.805134 | 1.545861e-49 | -8.615850e-47 |
| Msa0277250 | Msa0726610 | 0.822303 | 2.546479e-53 | -8.615850e-47 |
| Msa0277250 | Msa0727300 | 0.827038 | 1.950963e-54 | -8.615850e-47 |
| Msa0277250 | Msa0730180 | 0.804941 | 1.696251e-49 | -8.615850e-47 |
| Msa0277250 | Msa0734760 | 0.807250 | 5.539635e-50 | -8.615850e-47 |
| Msa0277250 | Msa0739610 | 0.805757 | 1.144445e-49 | -8.615850e-47 |
| Msa0277250 | Msa0750380 | 0.808888 | 2.481475e-50 | -8.615850e-47 |
| Msa0277250 | Msa0754350 | 0.809221 | 2.106687e-50 | -8.615850e-47 |
| Msa0277250 | Msa0756410 | 0.831948 | 1.249331e-55 | -8.615850e-47 |
| Msa0277250 | Msa0763910 | 0.806792 | 6.927074e-50 | -8.615850e-47 |
| Msa0277250 | Msa0766030 | 0.815052 | 1.126520e-51 | -8.615850e-47 |
| Msa0277250 | Msa0772150 | 0.816354 | 5.775637e-52 | -8.615850e-47 |
| Msa0277250 | Msa0794460 | 0.805790 | 1.125934e-49 | -8.615850e-47 |
| Msa0277250 | Msa0797220 | 0.813994 | 1.931160e-51 | -8.615850e-47 |
| Msa0277250 | Msa0798950 | 0.849621 | 2.874358e-60 | -8.615850e-47 |
| Msa0277250 | Msa0800130 | 0.807434 | 5.064318e-50 | -8.615850e-47 |
| Msa0277250 | Msa0812280 | 0.801710 | 7.917973e-49 | -8.615850e-47 |
| Msa0277250 | Msa0829430 | 0.810140 | 1.336702e-50 | -8.615850e-47 |
| Msa0277250 | Msa0830720 | 0.815508 | 8.918984e-52 | -8.615850e-47 |
| Msa0277250 | Msa0836200 | 0.800847 | 1.189330e-48 | -8.615850e-47 |
| Msa0277250 | Msa0840630 | 0.820322 | 7.291590e-53 | -8.615850e-47 |
| Msa0277250 | Msa0841980 | 0.826661 | 2.400488e-54 | -8.615850e-47 |
| Msa0277250 | Msa0844100 | 0.822033 | 2.940695e-53 | -8.615850e-47 |
| Msa0277250 | Msa0881050 | 0.802709 | 4.932057e-49 | -8.615850e-47 |
| Msa0277250 | Msa0887070 | 0.838425 | 2.897758e-57 | -8.615850e-47 |
| Msa0277250 | Msa0929400 | 0.801780 | 7.660013e-49 | -8.615850e-47 |
| Msa0277250 | Msa0950410 | 0.837643 | 4.605734e-57 | -8.615850e-47 |
| Msa0277250 | Msa0950620 | 0.824814 | 6.582191e-54 | -8.615850e-47 |
| Msa0277250 | Msa0964680 | 0.808868 | 2.506606e-50 | -8.615850e-47 |
| Msa0277250 | Msa0978000 | 0.806685 | 7.295342e-50 | -8.615850e-47 |
| Msa0277250 | Msa1000470 | 0.814214 | 1.726314e-51 | -8.615850e-47 |
| Msa0277250 | Msa1008960 | 0.818462 | 1.936225e-52 | -8.615850e-47 |
| Msa0277250 | Msa1016110 | 0.847471 | 1.132784e-59 | -8.615850e-47 |
| Msa0277250 | Msa1044040 | 0.816523 | 5.291656e-52 | -8.615850e-47 |
| Msa0277250 | Msa1067710 | 0.805286 | 1.436600e-49 | -8.615850e-47 |
| Msa0277250 | Msa1067910 | 0.816832 | 4.513299e-52 | -8.615850e-47 |
| Msa0277250 | Msa1093390 | 0.819457 | 1.150164e-52 | -8.615850e-47 |
| Msa0277250 | Msa1113210 | 0.811924 | 5.487938e-51 | -8.615850e-47 |
| Msa0277250 | Msa1122510 | 0.800243 | 1.579323e-48 | -8.615850e-47 |
| Msa0277250 | Msa1130650 | 0.807614 | 4.638954e-50 | -8.615850e-47 |
| Msa0277250 | Msa1140010 | 0.831750 | 1.398642e-55 | -8.615850e-47 |
| Msa0277250 | Msa1161160 | 0.812538 | 4.030485e-51 | -8.615850e-47 |
| Msa0277250 | Msa1184580 | 0.802995 | 4.306190e-49 | -8.615850e-47 |
| Msa0277250 | Msa1204430 | 0.808015 | 3.812318e-50 | -8.615850e-47 |
| Msa0277250 | Msa1208250 | 0.812353 | 4.425602e-51 | -8.615850e-47 |
| Msa0277250 | Msa1212740 | 0.827356 | 1.637333e-54 | -8.615850e-47 |
| Msa0277250 | Msa1212960 | 0.816402 | 5.633944e-52 | -8.615850e-47 |
| Msa0277250 | Msa1214900 | 0.854170 | 1.471134e-61 | -8.615850e-47 |
| Msa0277250 | Msa1218720 | 0.803568 | 3.276405e-49 | -8.615850e-47 |
| Msa0277250 | Msa1222580 | 0.826430 | 2.724896e-54 | -8.615850e-47 |
| Msa0277250 | Msa1233770 | 0.808303 | 3.308627e-50 | -8.615850e-47 |
| Msa0277250 | Msa1235760 | 0.805612 | 1.227019e-49 | -8.615850e-47 |
| Msa0277250 | Msa1244710 | 0.808198 | 3.484716e-50 | -8.615850e-47 |
| Msa0277250 | Msa1248400 | 0.812685 | 3.743043e-51 | -8.615850e-47 |
| Msa0277250 | Msa1268370 | 0.801863 | 7.366443e-49 | -8.615850e-47 |
| Msa0277250 | Msa1276080 | 0.812399 | 4.323593e-51 | -8.615850e-47 |
| Msa0277250 | Msa1284390 | 0.805183 | 1.509765e-49 | -8.615850e-47 |
| Msa0277250 | Msa1289340 | 0.802796 | 4.731784e-49 | -8.615850e-47 |
| Msa0277250 | Msa1296650 | 0.801086 | 1.062851e-48 | -8.615850e-47 |
| Msa0277250 | Msa1309100 | 0.800616 | 1.325762e-48 | -8.615850e-47 |
| Msa0277250 | Msa1331610 | 0.803069 | 4.156518e-49 | -8.615850e-47 |
| Msa0277250 | Msa1334650 | 0.805175 | 1.515581e-49 | -8.615850e-47 |
| Msa0277250 | Msa1343770 | 0.806892 | 6.596917e-50 | -8.615850e-47 |
| Msa0277250 | Msa1349360 | 0.818237 | 2.177304e-52 | -8.615850e-47 |
| Msa0277250 | Msa1350280 | 0.812046 | 5.163558e-51 | -8.615850e-47 |
| Msa0277250 | Msa1356730 | 0.810092 | 1.368425e-50 | -8.615850e-47 |
| Msa0277250 | Msa1357380 | 0.813705 | 2.236043e-51 | -8.615850e-47 |
| Msa0277250 | Msa1365210 | 0.813534 | 2.438265e-51 | -8.615850e-47 |
| Msa0277250 | Msa1366700 | 0.835362 | 1.753633e-56 | -8.615850e-47 |
| Msa0277250 | Msa1384980 | 0.834442 | 2.990358e-56 | -8.615850e-47 |
| Msa0277250 | Msa1386020 | 0.804013 | 2.648148e-49 | -8.615850e-47 |
| Msa0277250 | Msa1395580 | 0.811272 | 7.605102e-51 | -8.615850e-47 |
| Msa0277250 | Msa1395640 | 0.805756 | 1.144493e-49 | -8.615850e-47 |
| Msa0277250 | Msa1397110 | 0.811446 | 6.973443e-51 | -8.615850e-47 |
| Msa0277250 | Msa1397540 | 0.833619 | 4.806299e-56 | -8.615850e-47 |
| Msa0277250 | Msa1403900 | 0.807515 | 4.867074e-50 | -8.615850e-47 |
| Msa0277250 | Msa1408190 | 0.811214 | 7.828786e-51 | -8.615850e-47 |
| Msa0277250 | Msa1430760 | 0.822182 | 2.716441e-53 | -8.615850e-47 |
| Msa0277250 | Msa1435910 | 0.802782 | 4.764539e-49 | -8.615850e-47 |
| Msa0277250 | Msa1448990 | 0.809741 | 1.629203e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277250 | MtrunA17_Chr2g0290501 | 93.269 | 208 | 14 | 0 | 1 | 208 | 1 | 208 | 2.95e-146 | 410 |
| Msa0277250 | MtrunA17_Chr4g0076351 | 74.342 | 152 | 34 | 3 | 59 | 208 | 3 | 151 | 1.45e-78 | 236 |
| Msa0277250 | MtrunA17_Chr3g0102431 | 60.274 | 146 | 58 | 0 | 62 | 207 | 16 | 161 | 7.35e-61 | 191 |
| Msa0277250 | MtrunA17_Chr3g0120821 | 56.522 | 138 | 60 | 0 | 71 | 208 | 80 | 217 | 7.62e-57 | 183 |
| Msa0277250 | MtrunA17_Chr8g0383231 | 60.584 | 137 | 54 | 0 | 72 | 208 | 19 | 155 | 1.85e-56 | 180 |
| Msa0277250 | MtrunA17_Chr4g0055811 | 47.059 | 153 | 80 | 1 | 56 | 207 | 76 | 228 | 1.04e-47 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277250 | AT5G47650.5 | 64.964 | 137 | 48 | 0 | 71 | 207 | 19 | 155 | 2.90e-64 | 200 |
| Msa0277250 | AT5G47650.3 | 64.964 | 137 | 48 | 0 | 71 | 207 | 19 | 155 | 2.90e-64 | 200 |
| Msa0277250 | AT5G47650.1 | 64.964 | 137 | 48 | 0 | 71 | 207 | 19 | 155 | 2.90e-64 | 200 |
| Msa0277250 | AT5G47650.4 | 64.964 | 137 | 48 | 0 | 71 | 207 | 65 | 201 | 8.94e-64 | 200 |
| Msa0277250 | AT5G47650.2 | 64.964 | 137 | 48 | 0 | 71 | 207 | 66 | 202 | 9.10e-64 | 200 |
| Msa0277250 | AT4G25434.7 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 2.10e-56 | 178 |
| Msa0277250 | AT4G25434.6 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 2.12e-56 | 179 |
| Msa0277250 | AT4G12720.5 | 56.944 | 144 | 61 | 1 | 65 | 207 | 4 | 147 | 3.40e-56 | 177 |
| Msa0277250 | AT4G25434.11 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 3.57e-56 | 179 |
| Msa0277250 | AT4G25434.12 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 3.95e-56 | 178 |
| Msa0277250 | AT4G25434.8 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 1.25e-55 | 179 |
| Msa0277250 | AT4G25434.10 | 58.273 | 139 | 58 | 0 | 69 | 207 | 17 | 155 | 1.36e-55 | 178 |
| Msa0277250 | AT4G12720.2 | 56.944 | 144 | 61 | 1 | 65 | 207 | 4 | 147 | 1.67e-55 | 178 |
| Msa0277250 | AT4G12720.3 | 56.944 | 144 | 61 | 1 | 65 | 207 | 4 | 147 | 1.67e-55 | 178 |
| Msa0277250 | AT4G12720.1 | 56.944 | 144 | 61 | 1 | 65 | 207 | 4 | 147 | 1.67e-55 | 178 |
| Msa0277250 | AT4G12720.4 | 55.714 | 140 | 61 | 1 | 65 | 203 | 4 | 143 | 4.98e-52 | 170 |
| Msa0277250 | AT4G25434.9 | 55.396 | 139 | 57 | 1 | 69 | 207 | 17 | 150 | 4.90e-51 | 164 |
| Msa0277250 | AT4G25434.1 | 55.396 | 139 | 57 | 1 | 69 | 207 | 17 | 150 | 3.14e-50 | 164 |
| Msa0277250 | AT4G25434.2 | 55.396 | 139 | 57 | 1 | 69 | 207 | 17 | 150 | 3.45e-50 | 165 |
| Msa0277250 | AT2G04430.2 | 49.296 | 142 | 70 | 1 | 68 | 207 | 7 | 148 | 2.11e-46 | 154 |
| Msa0277250 | AT2G04430.1 | 49.296 | 142 | 70 | 1 | 68 | 207 | 26 | 167 | 2.62e-46 | 155 |
| Msa0277250 | AT2G04440.1 | 47.260 | 146 | 75 | 1 | 63 | 206 | 2 | 147 | 1.59e-45 | 150 |
| Msa0277250 | AT5G47240.1 | 45.087 | 173 | 89 | 3 | 37 | 207 | 65 | 233 | 5.51e-45 | 153 |
| Msa0277250 | AT2G04450.1 | 50.685 | 146 | 71 | 1 | 63 | 207 | 2 | 147 | 8.35e-45 | 150 |
| Msa0277250 | AT5G47240.2 | 45.087 | 173 | 89 | 3 | 37 | 207 | 65 | 233 | 9.89e-45 | 153 |
| Msa0277250 | AT4G25434.3 | 61.538 | 78 | 30 | 0 | 130 | 207 | 33 | 110 | 3.29e-31 | 114 |
| Msa0277250 | AT4G25434.5 | 61.538 | 78 | 30 | 0 | 130 | 207 | 33 | 110 | 3.29e-31 | 114 |
| Msa0277250 | AT4G25434.4 | 56.410 | 78 | 29 | 1 | 130 | 207 | 33 | 105 | 9.20e-26 | 100 |
| Msa0277250 | AT4G25434.13 | 61.905 | 63 | 24 | 0 | 145 | 207 | 1 | 63 | 1.11e-22 | 91.7 |
| Msa0277250 | AT4G12720.6 | 62.500 | 64 | 23 | 1 | 145 | 207 | 1 | 64 | 4.44e-21 | 87.0 |
Find 49 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACAAGCATTAAATATTT+TGG | 0.133502 | 2_3:+9763577 | None:intergenic |
| GGAAAATAGTGGACTATTTC+AGG | 0.142281 | 2_3:-9763042 | Msa0277250:CDS |
| GAGAAGATAATTGAGAATTT+TGG | 0.171118 | 2_3:+9764567 | None:intergenic |
| GGAATAGTATTTGGACTTTC+AGG | 0.173194 | 2_3:+9763547 | None:intergenic |
| TGCAAGATAACGAGAATTAT+TGG | 0.203640 | 2_3:+9764539 | None:intergenic |
| GCATTTGCAGGAATAGTATT+TGG | 0.212021 | 2_3:+9763538 | None:intergenic |
| ATCTTAGGTACTAGTTGTTC+AGG | 0.284024 | 2_3:-9763063 | Msa0277250:intron |
| TATTTCAGGGAACTGGAGTT+TGG | 0.329206 | 2_3:-9763028 | Msa0277250:CDS |
| AATATTTAATGCTTGTGTAT+TGG | 0.331420 | 2_3:-9763573 | Msa0277250:CDS |
| TGCAGGGCAAGAAGGGAGTT+TGG | 0.356585 | 2_3:-9763796 | Msa0277250:intron |
| TGGAATTGTATTTATTTGAA+TGG | 0.374721 | 2_3:+9764672 | None:intergenic |
| ACCCTGTGTGTGGCATTTGC+AGG | 0.375917 | 2_3:+9763526 | None:intergenic |
| AGTGGACTATTTCAGGGAAC+TGG | 0.415432 | 2_3:-9763035 | Msa0277250:CDS |
| CTTCAGCAAGACCGACTAGA+TGG | 0.444644 | 2_3:+9763759 | None:intergenic |
| GGAATTGTATTTATTTGAAT+GGG | 0.459796 | 2_3:+9764673 | None:intergenic |
| ATTAAAACACCCACTTCAAA+AGG | 0.462920 | 2_3:-9764471 | Msa0277250:intron |
| TGTGGAGCTTGATCAGCCTA+TGG | 0.468731 | 2_3:-9764212 | Msa0277250:CDS |
| GCGGTTGACATGCATCGAAT+AGG | 0.469119 | 2_3:+9764301 | None:intergenic |
| CAATAGTGTTACCTTAACTA+AGG | 0.470543 | 2_3:+9763736 | None:intergenic |
| ACATCGACTGATGATAAGTA+TGG | 0.472106 | 2_3:-9764244 | Msa0277250:CDS |
| CCCTACCGGAGTTGTCGATC+AGG | 0.481052 | 2_3:-9763000 | Msa0277250:intron |
| GAAAATAGTGGACTATTTCA+GGG | 0.507425 | 2_3:-9763041 | Msa0277250:CDS |
| AATGAAAGTATTGAAGTTGA+AGG | 0.508727 | 2_3:+9764626 | None:intergenic |
| CTAGTTGTTCAGGAAAATAG+TGG | 0.509297 | 2_3:-9763053 | Msa0277250:CDS |
| GTTGTCTTGCAGGGCAAGAA+GGG | 0.510569 | 2_3:-9763803 | Msa0277250:intron |
| TCTTGCTGAAGCCTTAGTTA+AGG | 0.518721 | 2_3:-9763747 | Msa0277250:intron |
| TGTTGTCTTGCAGGGCAAGA+AGG | 0.521293 | 2_3:-9763804 | Msa0277250:intron |
| ATTGCATTCAAACAAGGAAG+TGG | 0.534259 | 2_3:+9764727 | None:intergenic |
| GCCACACACAGGGTTGGCAT+TGG | 0.540943 | 2_3:-9763517 | Msa0277250:CDS |
| CAAACAAGGAAGTGGAACAT+TGG | 0.574609 | 2_3:+9764735 | None:intergenic |
| AAATTACCTATCCATCTAGT+CGG | 0.581467 | 2_3:-9763770 | Msa0277250:CDS |
| GCAAGACCGACTAGATGGAT+AGG | 0.593880 | 2_3:+9763764 | None:intergenic |
| TTATATCTTCATGTAGAACA+AGG | 0.595638 | 2_3:-9764500 | Msa0277250:CDS |
| TTCCTGCAAATGCCACACAC+AGG | 0.601163 | 2_3:-9763528 | Msa0277250:CDS |
| AAGTAGATTGCATTCAAACA+AGG | 0.608734 | 2_3:+9764721 | None:intergenic |
| GCAAATGCCACACACAGGGT+TGG | 0.610645 | 2_3:-9763523 | Msa0277250:CDS |
| GGAGTTTGGAAATTCCCTAC+CGG | 0.612649 | 2_3:-9763014 | Msa0277250:CDS |
| CCTGATCGACAACTCCGGTA+GGG | 0.614478 | 2_3:+9763000 | None:intergenic |
| TCCTGCAAATGCCACACACA+GGG | 0.616524 | 2_3:-9763527 | Msa0277250:CDS |
| ACGAATGTAGTCGAATCCAT+AGG | 0.621160 | 2_3:+9764196 | None:intergenic |
| TTGAACTTGATCTTCTGCCG+CGG | 0.625446 | 2_3:+9764282 | None:intergenic |
| ACCTGATCGACAACTCCGGT+AGG | 0.630380 | 2_3:+9762999 | None:intergenic |
| TAAGTATGGTGGCGTTATTG+TGG | 0.641029 | 2_3:-9764230 | Msa0277250:CDS |
| ATTTACCTGATCGACAACTC+CGG | 0.649547 | 2_3:+9762995 | None:intergenic |
| CGGCAGAAGATCAAGTTCAA+CGG | 0.658111 | 2_3:-9764279 | Msa0277250:CDS |
| ACCAATGCCAACCCTGTGTG+TGG | 0.684168 | 2_3:+9763516 | None:intergenic |
| TATTCGATGCATGTCAACCG+CGG | 0.688175 | 2_3:-9764299 | Msa0277250:CDS |
| TCGACTGATGATAAGTATGG+TGG | 0.693561 | 2_3:-9764241 | Msa0277250:CDS |
| TAAGATTGGAGTGACAAACA+CGG | 0.706518 | 2_3:-9764326 | Msa0277250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTTCTATAAATAA+AGG | + | chr2_3:9764399-9764418 | None:intergenic | 10.0% |
| !! | ACTAATTAAATTAAATATAG+AGG | + | chr2_3:9764430-9764449 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTCTATAAATAA+AGG | + | chr2_3:9764399-9764418 | None:intergenic | 10.0% |
| !! | ACTAATTAAATTAAATATAG+AGG | + | chr2_3:9764430-9764449 | None:intergenic | 10.0% |
| !! | TGATAATAAATAAGATACTT+GGG | + | chr2_3:9764477-9764496 | None:intergenic | 15.0% |
| !! | TATCATCATATACAAAAAAT+AGG | + | chr2_3:9764683-9764702 | None:intergenic | 15.0% |
| !! | TGATAATAAATAAGATACTT+GGG | + | chr2_3:9764477-9764496 | None:intergenic | 15.0% |
| !! | TATCATCATATACAAAAAAT+AGG | + | chr2_3:9764683-9764702 | None:intergenic | 15.0% |
| !! | GGAATTGTATTTATTTGAAT+GGG | + | chr2_3:9762961-9762980 | None:intergenic | 20.0% |
| !! | TGGAATTGTATTTATTTGAA+TGG | + | chr2_3:9762962-9762981 | None:intergenic | 20.0% |
| !!! | TGTTTATGATGATTATGTTT+TGG | - | chr2_3:9763198-9763217 | Msa0277250:intron | 20.0% |
| !! | ACAATTGAGTTATTTATGTT+TGG | - | chr2_3:9763708-9763727 | Msa0277250:intron | 20.0% |
| !! | ATTGCTTACCATATTAATAA+TGG | - | chr2_3:9763914-9763933 | Msa0277250:intron | 20.0% |
| !!! | TACACAAGCATTAAATATTT+TGG | + | chr2_3:9764057-9764076 | None:intergenic | 20.0% |
| !! | AATATTTAATGCTTGTGTAT+TGG | - | chr2_3:9764058-9764077 | Msa0277250:intron | 20.0% |
| !!! | TTTTTCTATAAATAAAGGTG+AGG | + | chr2_3:9764394-9764413 | None:intergenic | 20.0% |
| !! | GTGATAATAAATAAGATACT+TGG | + | chr2_3:9764478-9764497 | None:intergenic | 20.0% |
| !! | GGAATTGTATTTATTTGAAT+GGG | + | chr2_3:9762961-9762980 | None:intergenic | 20.0% |
| !! | TGGAATTGTATTTATTTGAA+TGG | + | chr2_3:9762962-9762981 | None:intergenic | 20.0% |
| !!! | TGTTTATGATGATTATGTTT+TGG | - | chr2_3:9763198-9763217 | Msa0277250:intron | 20.0% |
| !! | ACAATTGAGTTATTTATGTT+TGG | - | chr2_3:9763708-9763727 | Msa0277250:intron | 20.0% |
| !! | ATTGCTTACCATATTAATAA+TGG | - | chr2_3:9763914-9763933 | Msa0277250:intron | 20.0% |
| !!! | TACACAAGCATTAAATATTT+TGG | + | chr2_3:9764057-9764076 | None:intergenic | 20.0% |
| !! | AATATTTAATGCTTGTGTAT+TGG | - | chr2_3:9764058-9764077 | Msa0277250:intron | 20.0% |
| !!! | TTTTTCTATAAATAAAGGTG+AGG | + | chr2_3:9764394-9764413 | None:intergenic | 20.0% |
| !! | GTGATAATAAATAAGATACT+TGG | + | chr2_3:9764478-9764497 | None:intergenic | 20.0% |
| ! | AAAAATTGAATGAATGAGGT+TGG | + | chr2_3:9762982-9763001 | None:intergenic | 25.0% |
| ! | GTTGAAAAATTGAATGAATG+AGG | + | chr2_3:9762986-9763005 | None:intergenic | 25.0% |
| !!! | AATGAAAGTATTGAAGTTGA+AGG | + | chr2_3:9763008-9763027 | None:intergenic | 25.0% |
| !! | GAGAAGATAATTGAGAATTT+TGG | + | chr2_3:9763067-9763086 | None:intergenic | 25.0% |
| ! | TTATATCTTCATGTAGAACA+AGG | - | chr2_3:9763131-9763150 | Msa0277250:intron | 25.0% |
| !! | TTTTCCTTACTAGTTAAGAT+TGG | - | chr2_3:9763291-9763310 | Msa0277250:intron | 25.0% |
| ! | TGAAAAATGCATGATGAAAT+AGG | - | chr2_3:9763572-9763591 | Msa0277250:CDS | 25.0% |
| ! | TTGAGTTATTTATGTTTGGA+TGG | - | chr2_3:9763712-9763731 | Msa0277250:intron | 25.0% |
| !!! | ATGGTTTTACTCTAAATGTT+TGG | - | chr2_3:9763731-9763750 | Msa0277250:intron | 25.0% |
| !!! | ATCTGTCACGAATTTTTTAT+TGG | - | chr2_3:9763790-9763809 | Msa0277250:CDS | 25.0% |
| ! | CAACAGAACCATTATTAATA+TGG | + | chr2_3:9763925-9763944 | None:intergenic | 25.0% |
| ! | GAAGTTTGGTTAATGAAAAT+TGG | - | chr2_3:9763946-9763965 | Msa0277250:intron | 25.0% |
| ! | AAATGCATAAAATTGATGCA+TGG | + | chr2_3:9763988-9764007 | None:intergenic | 25.0% |
| ! | TTGTTTAGTATTTAATAGCG+AGG | + | chr2_3:9764174-9764193 | None:intergenic | 25.0% |
| ! | TAATCAAGCTTGTAGTTAAT+TGG | - | chr2_3:9764199-9764218 | Msa0277250:CDS | 25.0% |
| !! | AATGATAATGTCGTGTAAAT+TGG | - | chr2_3:9764291-9764310 | Msa0277250:CDS | 25.0% |
| !! | ATGATAATGTCGTGTAAATT+GGG | - | chr2_3:9764292-9764311 | Msa0277250:CDS | 25.0% |
| ! | GTTCATTATCTGAATTTACA+CGG | - | chr2_3:9764504-9764523 | Msa0277250:CDS | 25.0% |
| ! | CTACTTATTTAACCTATACA+GGG | - | chr2_3:9764722-9764741 | Msa0277250:five_prime_UTR | 25.0% |
| ! | AAAAATTGAATGAATGAGGT+TGG | + | chr2_3:9762982-9763001 | None:intergenic | 25.0% |
| ! | GTTGAAAAATTGAATGAATG+AGG | + | chr2_3:9762986-9763005 | None:intergenic | 25.0% |
| !!! | AATGAAAGTATTGAAGTTGA+AGG | + | chr2_3:9763008-9763027 | None:intergenic | 25.0% |
| !! | GAGAAGATAATTGAGAATTT+TGG | + | chr2_3:9763067-9763086 | None:intergenic | 25.0% |
| ! | TTATATCTTCATGTAGAACA+AGG | - | chr2_3:9763131-9763150 | Msa0277250:intron | 25.0% |
| !! | TTTTCCTTACTAGTTAAGAT+TGG | - | chr2_3:9763291-9763310 | Msa0277250:intron | 25.0% |
| ! | TGAAAAATGCATGATGAAAT+AGG | - | chr2_3:9763572-9763591 | Msa0277250:CDS | 25.0% |
| ! | TTGAGTTATTTATGTTTGGA+TGG | - | chr2_3:9763712-9763731 | Msa0277250:intron | 25.0% |
| !!! | ATGGTTTTACTCTAAATGTT+TGG | - | chr2_3:9763731-9763750 | Msa0277250:intron | 25.0% |
| !!! | ATCTGTCACGAATTTTTTAT+TGG | - | chr2_3:9763790-9763809 | Msa0277250:CDS | 25.0% |
| ! | CAACAGAACCATTATTAATA+TGG | + | chr2_3:9763925-9763944 | None:intergenic | 25.0% |
| ! | GAAGTTTGGTTAATGAAAAT+TGG | - | chr2_3:9763946-9763965 | Msa0277250:intron | 25.0% |
| ! | AAATGCATAAAATTGATGCA+TGG | + | chr2_3:9763988-9764007 | None:intergenic | 25.0% |
| ! | TTGTTTAGTATTTAATAGCG+AGG | + | chr2_3:9764174-9764193 | None:intergenic | 25.0% |
| ! | TAATCAAGCTTGTAGTTAAT+TGG | - | chr2_3:9764199-9764218 | Msa0277250:CDS | 25.0% |
| !! | AATGATAATGTCGTGTAAAT+TGG | - | chr2_3:9764291-9764310 | Msa0277250:CDS | 25.0% |
| !! | ATGATAATGTCGTGTAAATT+GGG | - | chr2_3:9764292-9764311 | Msa0277250:CDS | 25.0% |
| ! | GTTCATTATCTGAATTTACA+CGG | - | chr2_3:9764504-9764523 | Msa0277250:CDS | 25.0% |
| ! | CTACTTATTTAACCTATACA+GGG | - | chr2_3:9764722-9764741 | Msa0277250:five_prime_UTR | 25.0% |
| AAGTAGATTGCATTCAAACA+AGG | + | chr2_3:9762913-9762932 | None:intergenic | 30.0% | |
| TGCAAGATAACGAGAATTAT+TGG | + | chr2_3:9763095-9763114 | None:intergenic | 30.0% | |
| ATTAAAACACCCACTTCAAA+AGG | - | chr2_3:9763160-9763179 | Msa0277250:intron | 30.0% | |
| TAAATCAATGTTGTCTTGCA+GGG | - | chr2_3:9763819-9763838 | Msa0277250:intron | 30.0% | |
| AAATTACCTATCCATCTAGT+CGG | - | chr2_3:9763861-9763880 | Msa0277250:intron | 30.0% | |
| CAATAGTGTTACCTTAACTA+AGG | + | chr2_3:9763898-9763917 | None:intergenic | 30.0% | |
| TTTACGATTCTTTCTATGAC+AGG | - | chr2_3:9764005-9764024 | Msa0277250:intron | 30.0% | |
| !!! | TTAAATATTTTGGTTCTGCG+TGG | + | chr2_3:9764047-9764066 | None:intergenic | 30.0% |
| CTAGTGTATTTGGATCATTT+AGG | - | chr2_3:9764354-9764373 | Msa0277250:intron | 30.0% | |
| CATCGTTATTCATTGATCTT+AGG | - | chr2_3:9764553-9764572 | Msa0277250:CDS | 30.0% | |
| !! | GAAAATAGTGGACTATTTCA+GGG | - | chr2_3:9764590-9764609 | Msa0277250:exon | 30.0% |
| CCTGTATAGGTTAAATAAGT+AGG | + | chr2_3:9764724-9764743 | None:intergenic | 30.0% | |
| CCTACTTATTTAACCTATAC+AGG | - | chr2_3:9764721-9764740 | Msa0277250:five_prime_UTR | 30.0% | |
| AAGTAGATTGCATTCAAACA+AGG | + | chr2_3:9762913-9762932 | None:intergenic | 30.0% | |
| TGCAAGATAACGAGAATTAT+TGG | + | chr2_3:9763095-9763114 | None:intergenic | 30.0% | |
| ATTAAAACACCCACTTCAAA+AGG | - | chr2_3:9763160-9763179 | Msa0277250:intron | 30.0% | |
| TAAATCAATGTTGTCTTGCA+GGG | - | chr2_3:9763819-9763838 | Msa0277250:intron | 30.0% | |
| AAATTACCTATCCATCTAGT+CGG | - | chr2_3:9763861-9763880 | Msa0277250:intron | 30.0% | |
| CAATAGTGTTACCTTAACTA+AGG | + | chr2_3:9763898-9763917 | None:intergenic | 30.0% | |
| TTTACGATTCTTTCTATGAC+AGG | - | chr2_3:9764005-9764024 | Msa0277250:intron | 30.0% | |
| !!! | TTAAATATTTTGGTTCTGCG+TGG | + | chr2_3:9764047-9764066 | None:intergenic | 30.0% |
| CTAGTGTATTTGGATCATTT+AGG | - | chr2_3:9764354-9764373 | Msa0277250:intron | 30.0% | |
| CATCGTTATTCATTGATCTT+AGG | - | chr2_3:9764553-9764572 | Msa0277250:CDS | 30.0% | |
| !! | GAAAATAGTGGACTATTTCA+GGG | - | chr2_3:9764590-9764609 | Msa0277250:exon | 30.0% |
| CCTGTATAGGTTAAATAAGT+AGG | + | chr2_3:9764724-9764743 | None:intergenic | 30.0% | |
| CCTACTTATTTAACCTATAC+AGG | - | chr2_3:9764721-9764740 | Msa0277250:five_prime_UTR | 30.0% | |
| ATTGCATTCAAACAAGGAAG+TGG | + | chr2_3:9762907-9762926 | None:intergenic | 35.0% | |
| !!! | AAGCAACTACCTTTTGAAGT+GGG | + | chr2_3:9763172-9763191 | None:intergenic | 35.0% |
| !! | TAAGCAACTACCTTTTGAAG+TGG | + | chr2_3:9763173-9763192 | None:intergenic | 35.0% |
| CTTCAAAAGGTAGTTGCTTA+AGG | - | chr2_3:9763173-9763192 | Msa0277250:intron | 35.0% | |
| CACTCCAATCTTAACTAGTA+AGG | + | chr2_3:9763298-9763317 | None:intergenic | 35.0% | |
| TAAGATTGGAGTGACAAACA+CGG | - | chr2_3:9763305-9763324 | Msa0277250:intron | 35.0% | |
| ! | ACATCGACTGATGATAAGTA+TGG | - | chr2_3:9763387-9763406 | Msa0277250:intron | 35.0% |
| ! | TTAGAGCTTCGATTTTACAC+TGG | - | chr2_3:9763466-9763485 | Msa0277250:intron | 35.0% |
| ! | TTCATCCAATGCTTGTTAGA+AGG | - | chr2_3:9763606-9763625 | Msa0277250:CDS | 35.0% |
| TGTTTCCTTCTAACAAGCAT+TGG | + | chr2_3:9763614-9763633 | None:intergenic | 35.0% | |
| GTAAATCAATGTTGTCTTGC+AGG | - | chr2_3:9763818-9763837 | Msa0277250:intron | 35.0% | |
| ! | AATGGTTCTGTTGAGAAGTT+TGG | - | chr2_3:9763932-9763951 | Msa0277250:intron | 35.0% |
| GGAATAGTATTTGGACTTTC+AGG | + | chr2_3:9764087-9764106 | None:intergenic | 35.0% | |
| GCATTTGCAGGAATAGTATT+TGG | + | chr2_3:9764096-9764115 | None:intergenic | 35.0% | |
| TGTCATGAATGAAAAACACG+AGG | - | chr2_3:9764143-9764162 | Msa0277250:intron | 35.0% | |
| ! | AGTTTTCCTATCTTGTACCT+TGG | - | chr2_3:9764265-9764284 | Msa0277250:CDS | 35.0% |
| ATTCTACCAAGGTACAAGAT+AGG | + | chr2_3:9764274-9764293 | None:intergenic | 35.0% | |
| ACGACATTATCATTCTACCA+AGG | + | chr2_3:9764285-9764304 | None:intergenic | 35.0% | |
| ! | CAAATACACTAGTTCTCTCT+CGG | + | chr2_3:9764346-9764365 | None:intergenic | 35.0% |
| CTATAAATAAAGGTGAGGCA+AGG | + | chr2_3:9764389-9764408 | None:intergenic | 35.0% | |
| ACAAGATATTAGCTGCCAAT+AGG | + | chr2_3:9764531-9764550 | None:intergenic | 35.0% | |
| ATCTTAGGTACTAGTTGTTC+AGG | - | chr2_3:9764568-9764587 | Msa0277250:CDS | 35.0% | |
| CTAGTTGTTCAGGAAAATAG+TGG | - | chr2_3:9764578-9764597 | Msa0277250:CDS | 35.0% | |
| !! | GGAAAATAGTGGACTATTTC+AGG | - | chr2_3:9764589-9764608 | Msa0277250:exon | 35.0% |
| CAAATATCTTCTCCCTGTAT+AGG | + | chr2_3:9764737-9764756 | None:intergenic | 35.0% | |
| ATTGCATTCAAACAAGGAAG+TGG | + | chr2_3:9762907-9762926 | None:intergenic | 35.0% | |
| !!! | AAGCAACTACCTTTTGAAGT+GGG | + | chr2_3:9763172-9763191 | None:intergenic | 35.0% |
| !! | TAAGCAACTACCTTTTGAAG+TGG | + | chr2_3:9763173-9763192 | None:intergenic | 35.0% |
| CTTCAAAAGGTAGTTGCTTA+AGG | - | chr2_3:9763173-9763192 | Msa0277250:intron | 35.0% | |
| CACTCCAATCTTAACTAGTA+AGG | + | chr2_3:9763298-9763317 | None:intergenic | 35.0% | |
| TAAGATTGGAGTGACAAACA+CGG | - | chr2_3:9763305-9763324 | Msa0277250:intron | 35.0% | |
| ! | ACATCGACTGATGATAAGTA+TGG | - | chr2_3:9763387-9763406 | Msa0277250:intron | 35.0% |
| ! | TTAGAGCTTCGATTTTACAC+TGG | - | chr2_3:9763466-9763485 | Msa0277250:intron | 35.0% |
| ! | TTCATCCAATGCTTGTTAGA+AGG | - | chr2_3:9763606-9763625 | Msa0277250:CDS | 35.0% |
| TGTTTCCTTCTAACAAGCAT+TGG | + | chr2_3:9763614-9763633 | None:intergenic | 35.0% | |
| GTAAATCAATGTTGTCTTGC+AGG | - | chr2_3:9763818-9763837 | Msa0277250:intron | 35.0% | |
| ! | AATGGTTCTGTTGAGAAGTT+TGG | - | chr2_3:9763932-9763951 | Msa0277250:intron | 35.0% |
| GGAATAGTATTTGGACTTTC+AGG | + | chr2_3:9764087-9764106 | None:intergenic | 35.0% | |
| GCATTTGCAGGAATAGTATT+TGG | + | chr2_3:9764096-9764115 | None:intergenic | 35.0% | |
| TGTCATGAATGAAAAACACG+AGG | - | chr2_3:9764143-9764162 | Msa0277250:intron | 35.0% | |
| ! | AGTTTTCCTATCTTGTACCT+TGG | - | chr2_3:9764265-9764284 | Msa0277250:CDS | 35.0% |
| ATTCTACCAAGGTACAAGAT+AGG | + | chr2_3:9764274-9764293 | None:intergenic | 35.0% | |
| ACGACATTATCATTCTACCA+AGG | + | chr2_3:9764285-9764304 | None:intergenic | 35.0% | |
| ! | CAAATACACTAGTTCTCTCT+CGG | + | chr2_3:9764346-9764365 | None:intergenic | 35.0% |
| CTATAAATAAAGGTGAGGCA+AGG | + | chr2_3:9764389-9764408 | None:intergenic | 35.0% | |
| ACAAGATATTAGCTGCCAAT+AGG | + | chr2_3:9764531-9764550 | None:intergenic | 35.0% | |
| ATCTTAGGTACTAGTTGTTC+AGG | - | chr2_3:9764568-9764587 | Msa0277250:CDS | 35.0% | |
| CTAGTTGTTCAGGAAAATAG+TGG | - | chr2_3:9764578-9764597 | Msa0277250:CDS | 35.0% | |
| !! | GGAAAATAGTGGACTATTTC+AGG | - | chr2_3:9764589-9764608 | Msa0277250:exon | 35.0% |
| CAAATATCTTCTCCCTGTAT+AGG | + | chr2_3:9764737-9764756 | None:intergenic | 35.0% | |
| CAAACAAGGAAGTGGAACAT+TGG | + | chr2_3:9762899-9762918 | None:intergenic | 40.0% | |
| TCGACTGATGATAAGTATGG+TGG | - | chr2_3:9763390-9763409 | Msa0277250:intron | 40.0% | |
| ! | TAAGTATGGTGGCGTTATTG+TGG | - | chr2_3:9763401-9763420 | Msa0277250:intron | 40.0% |
| ACGAATGTAGTCGAATCCAT+AGG | + | chr2_3:9763438-9763457 | None:intergenic | 40.0% | |
| ! | GATTTTACACTGGAAGCAGA+TGG | - | chr2_3:9763476-9763495 | Msa0277250:intron | 40.0% |
| ! | CGCGAGTTGTGATATTGATT+TGG | - | chr2_3:9763683-9763702 | Msa0277250:intron | 40.0% |
| TCTTGCTGAAGCCTTAGTTA+AGG | - | chr2_3:9763884-9763903 | Msa0277250:intron | 40.0% | |
| CGATTCTTTCTATGACAGGA+CGG | - | chr2_3:9764009-9764028 | Msa0277250:intron | 40.0% | |
| ! | TTCTATGACAGGACGGTTTT+TGG | - | chr2_3:9764016-9764035 | Msa0277250:intron | 40.0% |
| ! | AAGTACTGTCTTGACGTTTG+AGG | - | chr2_3:9764222-9764241 | Msa0277250:CDS | 40.0% |
| AGTACTGTCTTGACGTTTGA+GGG | - | chr2_3:9764223-9764242 | Msa0277250:CDS | 40.0% | |
| CGAGAGAGAACTAGTGTATT+TGG | - | chr2_3:9764344-9764363 | Msa0277250:intron | 40.0% | |
| CTGAATTTACACGGTCCTAT+TGG | - | chr2_3:9764513-9764532 | Msa0277250:CDS | 40.0% | |
| TATTTCAGGGAACTGGAGTT+TGG | - | chr2_3:9764603-9764622 | Msa0277250:exon | 40.0% | |
| ATTTACCTGATCGACAACTC+CGG | + | chr2_3:9764639-9764658 | None:intergenic | 40.0% | |
| TGTCGATCAGGTAAATGTGT+TGG | - | chr2_3:9764643-9764662 | Msa0277250:five_prime_UTR | 40.0% | |
| CAAACAAGGAAGTGGAACAT+TGG | + | chr2_3:9762899-9762918 | None:intergenic | 40.0% | |
| TCGACTGATGATAAGTATGG+TGG | - | chr2_3:9763390-9763409 | Msa0277250:intron | 40.0% | |
| ! | TAAGTATGGTGGCGTTATTG+TGG | - | chr2_3:9763401-9763420 | Msa0277250:intron | 40.0% |
| ACGAATGTAGTCGAATCCAT+AGG | + | chr2_3:9763438-9763457 | None:intergenic | 40.0% | |
| ! | GATTTTACACTGGAAGCAGA+TGG | - | chr2_3:9763476-9763495 | Msa0277250:intron | 40.0% |
| ! | CGCGAGTTGTGATATTGATT+TGG | - | chr2_3:9763683-9763702 | Msa0277250:intron | 40.0% |
| TCTTGCTGAAGCCTTAGTTA+AGG | - | chr2_3:9763884-9763903 | Msa0277250:intron | 40.0% | |
| CGATTCTTTCTATGACAGGA+CGG | - | chr2_3:9764009-9764028 | Msa0277250:intron | 40.0% | |
| ! | TTCTATGACAGGACGGTTTT+TGG | - | chr2_3:9764016-9764035 | Msa0277250:intron | 40.0% |
| ! | AAGTACTGTCTTGACGTTTG+AGG | - | chr2_3:9764222-9764241 | Msa0277250:CDS | 40.0% |
| AGTACTGTCTTGACGTTTGA+GGG | - | chr2_3:9764223-9764242 | Msa0277250:CDS | 40.0% | |
| CGAGAGAGAACTAGTGTATT+TGG | - | chr2_3:9764344-9764363 | Msa0277250:intron | 40.0% | |
| CTGAATTTACACGGTCCTAT+TGG | - | chr2_3:9764513-9764532 | Msa0277250:CDS | 40.0% | |
| TATTTCAGGGAACTGGAGTT+TGG | - | chr2_3:9764603-9764622 | Msa0277250:exon | 40.0% | |
| ATTTACCTGATCGACAACTC+CGG | + | chr2_3:9764639-9764658 | None:intergenic | 40.0% | |
| TGTCGATCAGGTAAATGTGT+TGG | - | chr2_3:9764643-9764662 | Msa0277250:five_prime_UTR | 40.0% | |
| TATTCGATGCATGTCAACCG+CGG | - | chr2_3:9763332-9763351 | Msa0277250:intron | 45.0% | |
| TTGAACTTGATCTTCTGCCG+CGG | + | chr2_3:9763352-9763371 | None:intergenic | 45.0% | |
| CGGCAGAAGATCAAGTTCAA+CGG | - | chr2_3:9763352-9763371 | Msa0277250:intron | 45.0% | |
| !! | AGTGGACTATTTCAGGGAAC+TGG | - | chr2_3:9764596-9764615 | Msa0277250:exon | 45.0% |
| GGAGTTTGGAAATTCCCTAC+CGG | - | chr2_3:9764617-9764636 | Msa0277250:five_prime_UTR | 45.0% | |
| TATTCGATGCATGTCAACCG+CGG | - | chr2_3:9763332-9763351 | Msa0277250:intron | 45.0% | |
| TTGAACTTGATCTTCTGCCG+CGG | + | chr2_3:9763352-9763371 | None:intergenic | 45.0% | |
| CGGCAGAAGATCAAGTTCAA+CGG | - | chr2_3:9763352-9763371 | Msa0277250:intron | 45.0% | |
| !! | AGTGGACTATTTCAGGGAAC+TGG | - | chr2_3:9764596-9764615 | Msa0277250:exon | 45.0% |
| GGAGTTTGGAAATTCCCTAC+CGG | - | chr2_3:9764617-9764636 | Msa0277250:five_prime_UTR | 45.0% | |
| GCGGTTGACATGCATCGAAT+AGG | + | chr2_3:9763333-9763352 | None:intergenic | 50.0% | |
| TGTGGAGCTTGATCAGCCTA+TGG | - | chr2_3:9763419-9763438 | Msa0277250:intron | 50.0% | |
| TGTTGTCTTGCAGGGCAAGA+AGG | - | chr2_3:9763827-9763846 | Msa0277250:intron | 50.0% | |
| GTTGTCTTGCAGGGCAAGAA+GGG | - | chr2_3:9763828-9763847 | Msa0277250:intron | 50.0% | |
| GCAAGACCGACTAGATGGAT+AGG | + | chr2_3:9763870-9763889 | None:intergenic | 50.0% | |
| CTTCAGCAAGACCGACTAGA+TGG | + | chr2_3:9763875-9763894 | None:intergenic | 50.0% | |
| TTCCTGCAAATGCCACACAC+AGG | - | chr2_3:9764103-9764122 | Msa0277250:intron | 50.0% | |
| TCCTGCAAATGCCACACACA+GGG | - | chr2_3:9764104-9764123 | Msa0277250:intron | 50.0% | |
| GCGGTTGACATGCATCGAAT+AGG | + | chr2_3:9763333-9763352 | None:intergenic | 50.0% | |
| TGTGGAGCTTGATCAGCCTA+TGG | - | chr2_3:9763419-9763438 | Msa0277250:intron | 50.0% | |
| TGTTGTCTTGCAGGGCAAGA+AGG | - | chr2_3:9763827-9763846 | Msa0277250:intron | 50.0% | |
| GTTGTCTTGCAGGGCAAGAA+GGG | - | chr2_3:9763828-9763847 | Msa0277250:intron | 50.0% | |
| GCAAGACCGACTAGATGGAT+AGG | + | chr2_3:9763870-9763889 | None:intergenic | 50.0% | |
| CTTCAGCAAGACCGACTAGA+TGG | + | chr2_3:9763875-9763894 | None:intergenic | 50.0% | |
| TTCCTGCAAATGCCACACAC+AGG | - | chr2_3:9764103-9764122 | Msa0277250:intron | 50.0% | |
| TCCTGCAAATGCCACACACA+GGG | - | chr2_3:9764104-9764123 | Msa0277250:intron | 50.0% | |
| TGCAGGGCAAGAAGGGAGTT+TGG | - | chr2_3:9763835-9763854 | Msa0277250:intron | 55.0% | |
| ACCCTGTGTGTGGCATTTGC+AGG | + | chr2_3:9764108-9764127 | None:intergenic | 55.0% | |
| GCAAATGCCACACACAGGGT+TGG | - | chr2_3:9764108-9764127 | Msa0277250:intron | 55.0% | |
| ACCAATGCCAACCCTGTGTG+TGG | + | chr2_3:9764118-9764137 | None:intergenic | 55.0% | |
| CCTGATCGACAACTCCGGTA+GGG | + | chr2_3:9764634-9764653 | None:intergenic | 55.0% | |
| ACCTGATCGACAACTCCGGT+AGG | + | chr2_3:9764635-9764654 | None:intergenic | 55.0% | |
| TGCAGGGCAAGAAGGGAGTT+TGG | - | chr2_3:9763835-9763854 | Msa0277250:intron | 55.0% | |
| ACCCTGTGTGTGGCATTTGC+AGG | + | chr2_3:9764108-9764127 | None:intergenic | 55.0% | |
| GCAAATGCCACACACAGGGT+TGG | - | chr2_3:9764108-9764127 | Msa0277250:intron | 55.0% | |
| ACCAATGCCAACCCTGTGTG+TGG | + | chr2_3:9764118-9764137 | None:intergenic | 55.0% | |
| CCTGATCGACAACTCCGGTA+GGG | + | chr2_3:9764634-9764653 | None:intergenic | 55.0% | |
| ACCTGATCGACAACTCCGGT+AGG | + | chr2_3:9764635-9764654 | None:intergenic | 55.0% | |
| ! | GCCACACACAGGGTTGGCAT+TGG | - | chr2_3:9764114-9764133 | Msa0277250:intron | 60.0% |
| CCCTACCGGAGTTGTCGATC+AGG | - | chr2_3:9764631-9764650 | Msa0277250:five_prime_UTR | 60.0% | |
| ! | GCCACACACAGGGTTGGCAT+TGG | - | chr2_3:9764114-9764133 | Msa0277250:intron | 60.0% |
| CCCTACCGGAGTTGTCGATC+AGG | - | chr2_3:9764631-9764650 | Msa0277250:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 9762896 | 9764757 | 9762896 | ID=Msa0277250;Name=Msa0277250 |
| chr2_3 | mRNA | 9762896 | 9764757 | 9762896 | ID=Msa0277250-mRNA-1;Parent=Msa0277250;Name=Msa0277250-mRNA-1;_AED=0.06;_eAED=0.06;_QI=153|1|0.83|1|0.8|0.66|6|0|208 |
| chr2_3 | exon | 9762896 | 9762910 | 9762896 | ID=Msa0277250-mRNA-1:exon:4377;Parent=Msa0277250-mRNA-1 |
| chr2_3 | exon | 9763001 | 9763078 | 9763001 | ID=Msa0277250-mRNA-1:exon:4376;Parent=Msa0277250-mRNA-1 |
| chr2_3 | exon | 9763489 | 9763626 | 9763489 | ID=Msa0277250-mRNA-1:exon:4375;Parent=Msa0277250-mRNA-1 |
| chr2_3 | exon | 9763748 | 9763813 | 9763748 | ID=Msa0277250-mRNA-1:exon:4374;Parent=Msa0277250-mRNA-1 |
| chr2_3 | exon | 9764156 | 9764349 | 9764156 | ID=Msa0277250-mRNA-1:exon:4373;Parent=Msa0277250-mRNA-1 |
| chr2_3 | exon | 9764472 | 9764757 | 9764472 | ID=Msa0277250-mRNA-1:exon:4372;Parent=Msa0277250-mRNA-1 |
| chr2_3 | five_prime_UTR | 9764605 | 9764757 | 9764605 | ID=Msa0277250-mRNA-1:five_prime_utr;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9764472 | 9764604 | 9764472 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9764156 | 9764349 | 9764156 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9763748 | 9763813 | 9763748 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9763489 | 9763626 | 9763489 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9763001 | 9763078 | 9763001 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| chr2_3 | CDS | 9762896 | 9762910 | 9762896 | ID=Msa0277250-mRNA-1:cds;Parent=Msa0277250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
