AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0988790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988790 MtrunA17_Chr6g0470101 89.286 308 13 2 1 292 51 354 0.0 532
Msa0988790 MtrunA17_Chr3g0086601 42.786 201 98 2 41 225 75 274 7.38e-47 158
Msa0988790 MtrunA17_Chr5g0398991 33.133 166 92 3 58 204 71 236 1.41e-25 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988790 AT4G21190.1 66.822 214 55 1 27 224 30 243 4.02e-104 306
Msa0988790 AT4G18975.2 44.162 197 93 2 42 222 58 253 2.74e-50 167
Msa0988790 AT4G18975.3 44.162 197 93 2 42 222 85 280 6.15e-50 167
Msa0988790 AT4G18975.4 44.162 197 93 2 42 222 85 280 6.15e-50 167
Msa0988790 AT4G18975.1 44.162 197 93 2 42 222 85 280 6.15e-50 167
Msa0988790 AT1G04590.1 34.615 182 102 2 40 204 131 312 1.83e-27 110
Msa0988790 AT1G04590.2 34.595 185 101 3 40 204 131 315 6.83e-26 105

Find 93 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGATTCATCTGAGTTTA+TGG 0.136082 6_4:-43346515 Msa0988790:CDS
CCGAGATTTGCGGCCAGTTT+TGG 0.138232 6_4:+43350396 None:intergenic
ATCGTGGACTTCGCCATTTC+AGG 0.196538 6_4:+43346227 None:intergenic
ACGTATCTATCGACTTTATT+AGG 0.199277 6_4:+43346673 None:intergenic
TCTCGTTATACTTCTAAATT+TGG 0.208592 6_4:+43346490 None:intergenic
CTGAATTGAAGTTGTGTATT+TGG 0.241402 6_4:-43346166 Msa0988790:three_prime_UTR
TCCTATAATTACAGTGAAAA+AGG 0.241597 6_4:-43348676 Msa0988790:intron
TCGCGTGTAACTAACATTAA+TGG 0.254912 6_4:+43346425 None:intergenic
AGAAGAGACTTCAGAGTTAA+TGG 0.256931 6_4:-43346596 Msa0988790:CDS
AATGTCAAAGAAGAAGTTTA+TGG 0.291907 6_4:-43348735 Msa0988790:CDS
AATGCATATAGGCTTTGATT+AGG 0.320445 6_4:-43346093 Msa0988790:three_prime_UTR
CCCTACAATCTCTATATATT+AGG 0.327339 6_4:+43346124 None:intergenic
TCCTCTCTTAAGCCTGGATT+TGG 0.327589 6_4:+43346628 None:intergenic
AAGGAAAGCGTGTAAGAATC+AGG 0.347993 6_4:-43346708 Msa0988790:CDS
TGAAACTATAGGTAACAAAA+TGG 0.351629 6_4:-43348416 Msa0988790:intron
TACACGCGAAATCATTATTT+CGG 0.352288 6_4:-43346411 Msa0988790:three_prime_UTR
GACCAAGATATCCTCGAGTT+TGG 0.361562 6_4:-43350148 Msa0988790:CDS
TGAATCATCTGAAATTTGTT+TGG 0.368446 6_4:+43346528 None:intergenic
TTGACGAAGCAGAAGAGCTT+TGG 0.377250 6_4:-43348317 Msa0988790:CDS
TATTTGATATGTTAATTTGT+TGG 0.381277 6_4:+43350294 None:intergenic
TGCCCGCCAAAACCCAAAAC+TGG 0.381754 6_4:-43350409 Msa0988790:five_prime_UTR
AAGTGGATGATGATGGATTT+GGG 0.389153 6_4:+43350480 None:intergenic
ATGCATATAGGCTTTGATTA+GGG 0.389204 6_4:-43346092 Msa0988790:three_prime_UTR
GAAGTTCTGTGTTATATTGT+TGG 0.389600 6_4:-43346060 Msa0988790:three_prime_UTR
CCAAAACTGGCCGCAAATCT+CGG 0.394097 6_4:-43350396 Msa0988790:five_prime_UTR
GAAGTGGATGATGATGGATT+TGG 0.396162 6_4:+43350479 None:intergenic
TAGTAGTTCTGTTGTCTCAA+TGG 0.409178 6_4:-43346824 Msa0988790:CDS
CTGCTTGTGGCGGTGGCTGA+TGG 0.416890 6_4:+43350363 None:intergenic
TTCCAAACTCGAGGATATCT+TGG 0.417267 6_4:+43350146 None:intergenic
TGATATCCTCATAAATGAAA+TGG 0.417527 6_4:+43346288 None:intergenic
AAAATGTAAGCCTGACAATC+TGG 0.422289 6_4:-43346317 Msa0988790:three_prime_UTR
TGGTAGCCATTTCATTTATG+AGG 0.423150 6_4:-43346294 Msa0988790:three_prime_UTR
TCTACTTCAGATTCCTGAAA+TGG 0.427650 6_4:-43346240 Msa0988790:three_prime_UTR
CTATATTCCCATTGCGGTGG+TGG 0.430282 6_4:+43346739 None:intergenic
AAGTAGATATGTTACTTGAT+TGG 0.432968 6_4:+43346256 None:intergenic
AAAATATCCACCACCGCAAT+GGG 0.433687 6_4:-43346746 Msa0988790:CDS
AAGGTATTTGCTGCTGCAAA+AGG 0.436480 6_4:-43350176 Msa0988790:CDS
CAAAACTGGCCGCAAATCTC+GGG 0.449082 6_4:-43350395 Msa0988790:five_prime_UTR
AGGTAAGGTGAAGACACTTT+AGG 0.452793 6_4:-43346363 Msa0988790:three_prime_UTR
ACTCGAGGATATCTTGGTCT+TGG 0.456302 6_4:+43350152 None:intergenic
CTATCTTCCTCTCTTAAGCC+TGG 0.457380 6_4:+43346622 None:intergenic
CTCTTGATACCTATGTCGCT+TGG 0.459035 6_4:-43348710 Msa0988790:CDS
GAAGTATAACGAGAGAAAGA+TGG 0.461174 6_4:-43346481 Msa0988790:exon
ATGGCTACCACCAGATTGTC+AGG 0.464476 6_4:+43346307 None:intergenic
AGCATTACTGCTTGTGGCGG+TGG 0.467846 6_4:+43350356 None:intergenic
GGATGATGAACAATTCGAAC+AGG 0.474763 6_4:-43346575 Msa0988790:CDS
CATGTAGGTATTTGCAGACA+TGG 0.476328 6_4:-43346866 Msa0988790:intron
AGTTCTGTTGTCTCAATGGT+TGG 0.480356 6_4:-43346820 Msa0988790:CDS
GATATGTTAATTTGTTGGTA+TGG 0.485734 6_4:+43350299 None:intergenic
CTTCAAAGAGCTAGGTATGA+TGG 0.487411 6_4:-43346791 Msa0988790:CDS
ATATCTATCTACTGTAAAAG+AGG 0.491255 6_4:-43348237 Msa0988790:CDS
ACTTGCTGCTGATGTATGTA+AGG 0.491520 6_4:+43350448 None:intergenic
CTTACTCAGCCCGAGATTTG+CGG 0.496172 6_4:+43350386 None:intergenic
CTTGCATGATAAGATGTTTG+AGG 0.498325 6_4:-43348214 Msa0988790:intron
GCTGCTGATGTATGTAAGGT+TGG 0.501116 6_4:+43350452 None:intergenic
TCTTGATACCTATGTCGCTT+GGG 0.501458 6_4:-43348709 Msa0988790:CDS
ATGTAAGGTTGGTGTGGAAG+TGG 0.504639 6_4:+43350463 None:intergenic
GCCTAATATATAGAGATTGT+AGG 0.517424 6_4:-43346125 Msa0988790:three_prime_UTR
GGATGCCGATTTAAAATGCA+TGG 0.521969 6_4:-43346554 Msa0988790:CDS
CCTAATATATAGAGATTGTA+GGG 0.522530 6_4:-43346124 Msa0988790:three_prime_UTR
CTACATGCTGTTACGAGGTA+AGG 0.523242 6_4:-43346378 Msa0988790:three_prime_UTR
ATTGAGACAACAGAACTACT+AGG 0.527919 6_4:+43346826 None:intergenic
CTTCAATTCAGCATTGACAC+TGG 0.529177 6_4:+43346178 None:intergenic
AACAAAATGGATGCTAAGCA+AGG 0.531400 6_4:-43348403 Msa0988790:CDS
TCTCTATATATTAGGCATTG+AGG 0.541057 6_4:+43346132 None:intergenic
GACAATGTTCAACCAAATCC+AGG 0.541175 6_4:-43346640 Msa0988790:CDS
GCTCTTCTGCTTCGTCAACT+CGG 0.545541 6_4:+43348322 None:intergenic
TTCTAGTTCCCAAGCGACAT+AGG 0.558781 6_4:+43348701 None:intergenic
ACTAGCAGATAAGTTTCTGT+TGG 0.562355 6_4:-43346448 Msa0988790:three_prime_UTR
AAGGGTCAAGGAAAGACAAT+GGG 0.563191 6_4:-43348384 Msa0988790:CDS
TTATTAGTCTTCCAAACTCG+AGG 0.571818 6_4:+43350137 None:intergenic
GGAAATGTCTTCAAAGAGCT+AGG 0.573832 6_4:-43346799 Msa0988790:CDS
GGTGTGGAAGTGGATGATGA+TGG 0.594460 6_4:+43350473 None:intergenic
CGTGTAAGAATCAGGGTGCA+AGG 0.595586 6_4:-43346700 Msa0988790:CDS
TGGGAATATAGATACATCAA+AGG 0.602911 6_4:-43346727 Msa0988790:CDS
ACTACTTAATGCTTTAGCAG+AGG 0.604140 6_4:-43348349 Msa0988790:CDS
ATGTATCTATATTCCCATTG+CGG 0.604796 6_4:+43346733 None:intergenic
AGGAAAGCGTGTAAGAATCA+GGG 0.610217 6_4:-43346707 Msa0988790:CDS
GAACATAACAACTTATATCG+TGG 0.614909 6_4:+43346211 None:intergenic
CTTACCTCGTAACAGCATGT+AGG 0.629695 6_4:+43346379 None:intergenic
TATGGTTTAGCAATAAGTAG+AGG 0.629980 6_4:+43350317 None:intergenic
TGGATGCTAAGCAAGGGTCA+AGG 0.634274 6_4:-43348396 Msa0988790:CDS
CAAGGGTCAAGGAAAGACAA+TGG 0.634494 6_4:-43348385 Msa0988790:CDS
TATCTATATTCCCATTGCGG+TGG 0.638033 6_4:+43346736 None:intergenic
GACTCCTACATGCTGTTACG+AGG 0.640590 6_4:-43346383 Msa0988790:three_prime_UTR
ACAAAATGGATGCTAAGCAA+GGG 0.649924 6_4:-43348402 Msa0988790:CDS
ACCAAATCCAGGCTTAAGAG+AGG 0.654831 6_4:-43346629 Msa0988790:CDS
AGTGAAAGCATTACTGCTTG+TGG 0.656125 6_4:+43350350 None:intergenic
ATGTAAGCCTGACAATCTGG+TGG 0.662083 6_4:-43346314 Msa0988790:three_prime_UTR
AAAGCTATTAATGCAGTACA+CGG 0.681216 6_4:-43348292 Msa0988790:CDS
TGATGTATGTAAGGTTGGTG+TGG 0.688673 6_4:+43350457 None:intergenic
GAAAGCATTACTGCTTGTGG+CGG 0.705239 6_4:+43350353 None:intergenic
GTAGGTATTTGCAGACATGG+AGG 0.706718 6_4:-43346863 Msa0988790:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGTAAAAAGATTAATT+TGG - chr6_4:43345961-43345980 Msa0988790:three_prime_UTR 10.0%
!! TTATATATATTCTGTAAATA+TGG - chr6_4:43348486-43348505 Msa0988790:intron 10.0%
!!! TATTTGATATGTTAATTTGT+TGG + chr6_4:43346185-43346204 None:intergenic 15.0%
!!! TAATTTTCTCAAATTATTAG+CGG + chr6_4:43346570-43346589 None:intergenic 15.0%
!! ATTTACATGTTTACTATATT+CGG + chr6_4:43349144-43349163 None:intergenic 15.0%
!! TGGAAGACTAATAAAAAAAT+TGG - chr6_4:43346348-43346367 Msa0988790:three_prime_UTR 20.0%
!! GGAAGACTAATAAAAAAATT+GGG - chr6_4:43346349-43346368 Msa0988790:three_prime_UTR 20.0%
!! ATGAACATAAAAAAATCACA+AGG + chr6_4:43347900-43347919 None:intergenic 20.0%
!!! AAATTACTTTCTGAAACTAT+AGG - chr6_4:43348049-43348068 Msa0988790:intron 20.0%
!! TTGTATATTCAAAGTTCAAA+TGG - chr6_4:43348397-43348416 Msa0988790:CDS 20.0%
!! TTGGATAAAAGAAAAGTTAT+TGG - chr6_4:43348430-43348449 Msa0988790:intron 20.0%
!! AAAGTTATTGGAGTAAAAAT+AGG - chr6_4:43348442-43348461 Msa0988790:intron 20.0%
!!! TTTTTTCAGTATATTTCCAA+TGG + chr6_4:43348622-43348641 None:intergenic 20.0%
!! AAAAATCAAATAAAGTGGTA+TGG - chr6_4:43348971-43348990 Msa0988790:intron 20.0%
!! ACAAACAAATGTTGTTAATA+TGG - chr6_4:43349554-43349573 Msa0988790:intron 20.0%
!!! GATATGTTAATTTGTTGGTA+TGG + chr6_4:43346180-43346199 None:intergenic 25.0%
!!! TCCTTAGTTCTATAGTTTTT+AGG - chr6_4:43346232-43346251 Msa0988790:three_prime_UTR 25.0%
!!! CCTTAGTTCTATAGTTTTTA+GGG - chr6_4:43346233-43346252 Msa0988790:three_prime_UTR 25.0%
!!! AAAAATTGGGACTATTTCTA+AGG - chr6_4:43346362-43346381 Msa0988790:three_prime_UTR 25.0%
!!! ATTGAATAATGCCATTTTCT+CGG + chr6_4:43346861-43346880 None:intergenic 25.0%
! ATTCCTTTGATTAAAAGAGT+CGG - chr6_4:43346935-43346954 Msa0988790:intron 25.0%
! TAGTATTTAACAATGTCAGA+TGG - chr6_4:43347068-43347087 Msa0988790:intron 25.0%
!!! GATACATTGACTTCTTTATA+TGG + chr6_4:43347105-43347124 None:intergenic 25.0%
! TGGGTTAAAGTCATAAAAAT+TGG - chr6_4:43347198-43347217 Msa0988790:intron 25.0%
! AATGTCAAAGAAGAAGTTTA+TGG - chr6_4:43347741-43347760 Msa0988790:intron 25.0%
! TCCTATAATTACAGTGAAAA+AGG - chr6_4:43347800-43347819 Msa0988790:intron 25.0%
!!! ACCTTTTTCACTGTAATTAT+AGG + chr6_4:43347804-43347823 None:intergenic 25.0%
! TGAAACTATAGGTAACAAAA+TGG - chr6_4:43348060-43348079 Msa0988790:intron 25.0%
!! ATTTTATCAAAGAATCTACG+TGG + chr6_4:43348218-43348237 None:intergenic 25.0%
! ATATCTATCTACTGTAAAAG+AGG - chr6_4:43348239-43348258 Msa0988790:CDS 25.0%
! TTCAAATGGCAAATATACAT+TGG - chr6_4:43348411-43348430 Msa0988790:intron 25.0%
!!! TTTCATCAATTAGCTTGTAT+TGG + chr6_4:43348525-43348544 None:intergenic 25.0%
! ACTGAAAAAAAAAATGAGCA+AGG - chr6_4:43348632-43348651 Msa0988790:intron 25.0%
! CTGAAAAAAAAAATGAGCAA+GGG - chr6_4:43348633-43348652 Msa0988790:intron 25.0%
! AAATAACTGAATGAAAACTG+AGG - chr6_4:43348694-43348713 Msa0988790:CDS 25.0%
! GGCAAAAAAATCAAATAAAG+TGG - chr6_4:43348966-43348985 Msa0988790:intron 25.0%
! TCTCTTAAGAAGTAAACATA+CGG - chr6_4:43349337-43349356 Msa0988790:intron 25.0%
! ACAAATGTTGTTAATATGGA+TGG - chr6_4:43349558-43349577 Msa0988790:intron 25.0%
! AAATTGAGTAAATATTGAGC+CGG + chr6_4:43349588-43349607 None:intergenic 25.0%
! ATTTACTCAATTTCTCATGT+AGG - chr6_4:43349595-43349614 Msa0988790:intron 25.0%
!! TGAATCATCTGAAATTTGTT+TGG + chr6_4:43349951-43349970 None:intergenic 25.0%
! TCTCGTTATACTTCTAAATT+TGG + chr6_4:43349989-43350008 None:intergenic 25.0%
! TGATATCCTCATAAATGAAA+TGG + chr6_4:43350191-43350210 None:intergenic 25.0%
!! AAGTAGATATGTTACTTGAT+TGG + chr6_4:43350223-43350242 None:intergenic 25.0%
! CCTAATATATAGAGATTGTA+GGG - chr6_4:43350352-43350371 Msa0988790:exon 25.0%
TATGGTTTAGCAATAAGTAG+AGG + chr6_4:43346162-43346181 None:intergenic 30.0%
CCCTAAAAACTATAGAACTA+AGG + chr6_4:43346236-43346255 None:intergenic 30.0%
ATGAAGCATAGATACAAACA+CGG - chr6_4:43346503-43346522 Msa0988790:CDS 30.0%
TTGAATGTGATCACATTTGT+CGG - chr6_4:43346715-43346734 Msa0988790:CDS 30.0%
! AGAACTAACACTTTTATCGA+AGG + chr6_4:43346776-43346795 None:intergenic 30.0%
ATGTAAGTATTATGTCGTGT+TGG - chr6_4:43346879-43346898 Msa0988790:intron 30.0%
AACCTTAGTAGTTTATGCTT+TGG - chr6_4:43346970-43346989 Msa0988790:intron 30.0%
AACCAAAGCATAAACTACTA+AGG + chr6_4:43346975-43346994 None:intergenic 30.0%
GTTTCTTACTAGTTGTGATA+TGG - chr6_4:43346992-43347011 Msa0988790:intron 30.0%
AAAGAAGTCAATGTATCCTT+TGG - chr6_4:43347108-43347127 Msa0988790:intron 30.0%
GTTCATAGACAAATAGTGAA+GGG + chr6_4:43347152-43347171 None:intergenic 30.0%
AGTTCATAGACAAATAGTGA+AGG + chr6_4:43347153-43347172 None:intergenic 30.0%
!!! TGTCTATGAACTAGTCTTTT+CGG - chr6_4:43347161-43347180 Msa0988790:intron 30.0%
!! TTTCGTTGATAGTTAGGTTA+CGG - chr6_4:43347224-43347243 Msa0988790:intron 30.0%
GTTACGGAAAAGTTACTTAT+TGG - chr6_4:43347240-43347259 Msa0988790:intron 30.0%
GCTGAATTAAGATACATTAC+CGG - chr6_4:43347262-43347281 Msa0988790:intron 30.0%
CTGAATTAAGATACATTACC+GGG - chr6_4:43347263-43347282 Msa0988790:intron 30.0%
CTTTCACAAATTTCTCATAC+CGG + chr6_4:43347337-43347356 None:intergenic 30.0%
AAAATAAAACACCATGGTGA+CGG + chr6_4:43347363-43347382 None:intergenic 30.0%
!!! CACCATGGTGTTTTATTTTA+TGG - chr6_4:43347364-43347383 Msa0988790:intron 30.0%
!!! CATGGTGTTTTATTTTATGG+CGG - chr6_4:43347367-43347386 Msa0988790:intron 30.0%
! TATTTTATGGCGGTTCAAAA+TGG - chr6_4:43347377-43347396 Msa0988790:intron 30.0%
!!! TGGTAGCTTTTTGAAATTTG+TGG + chr6_4:43347484-43347503 None:intergenic 30.0%
AATTTCAAAAAGCTACCACA+TGG - chr6_4:43347486-43347505 Msa0988790:intron 30.0%
GACTTTATACAGAAAACCTT+AGG - chr6_4:43347643-43347662 Msa0988790:intron 30.0%
GATGATTTATGTTCCTTCTT+TGG - chr6_4:43347997-43348016 Msa0988790:intron 30.0%
AAAGCTATTAATGCAGTACA+CGG - chr6_4:43348184-43348203 Msa0988790:intron 30.0%
ATGAAACAAAGATGTCCATT+CGG - chr6_4:43348539-43348558 Msa0988790:intron 30.0%
AACCAAAATCATAGAGTAAG+AGG - chr6_4:43348666-43348685 Msa0988790:intron 30.0%
AAAAGACTTGTCAAATACTC+AGG - chr6_4:43348757-43348776 Msa0988790:intron 30.0%
ATCAAATAAAGTGGTATGGA+TGG - chr6_4:43348975-43348994 Msa0988790:intron 30.0%
TAGAGTCGTTATTTATAGAC+AGG - chr6_4:43349038-43349057 Msa0988790:intron 30.0%
CAGACTAAATTGAACACATA+GGG + chr6_4:43349188-43349207 None:intergenic 30.0%
TCAGACTAAATTGAACACAT+AGG + chr6_4:43349189-43349208 None:intergenic 30.0%
TAAGAGAGAAAATCATCAAC+AGG + chr6_4:43349324-43349343 None:intergenic 30.0%
TGTTAATATGGATGGAATTC+CGG - chr6_4:43349566-43349585 Msa0988790:intron 30.0%
ATGTATCTATATTCCCATTG+CGG + chr6_4:43349746-43349765 None:intergenic 30.0%
TGGGAATATAGATACATCAA+AGG - chr6_4:43349749-43349768 Msa0988790:intron 30.0%
!! ACGTATCTATCGACTTTATT+AGG + chr6_4:43349806-43349825 None:intergenic 30.0%
! GGTTTCCATGCATTTTAAAT+CGG + chr6_4:43349930-43349949 None:intergenic 30.0%
AGATGATTCATCTGAGTTTA+TGG - chr6_4:43349961-43349980 Msa0988790:intron 30.0%
TACACGCGAAATCATTATTT+CGG - chr6_4:43350065-43350084 Msa0988790:intron 30.0%
GAACATAACAACTTATATCG+TGG + chr6_4:43350268-43350287 None:intergenic 30.0%
CTGAATTGAAGTTGTGTATT+TGG - chr6_4:43350310-43350329 Msa0988790:CDS 30.0%
! TCTCTATATATTAGGCATTG+AGG + chr6_4:43350347-43350366 None:intergenic 30.0%
GCCTAATATATAGAGATTGT+AGG - chr6_4:43350351-43350370 Msa0988790:exon 30.0%
CCCTACAATCTCTATATATT+AGG + chr6_4:43350355-43350374 None:intergenic 30.0%
! AATGCATATAGGCTTTGATT+AGG - chr6_4:43350383-43350402 Msa0988790:five_prime_UTR 30.0%
! ATGCATATAGGCTTTGATTA+GGG - chr6_4:43350384-43350403 Msa0988790:five_prime_UTR 30.0%
GAAGTTCTGTGTTATATTGT+TGG - chr6_4:43350416-43350435 Msa0988790:five_prime_UTR 30.0%
!! AAGTGGATGATGATGGATTT+GGG + chr6_4:43345999-43346018 None:intergenic 35.0%
!! TTATTAGTCTTCCAAACTCG+AGG + chr6_4:43346342-43346361 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG + chr6_4:43346564-43346583 None:intergenic 35.0%
TTATCGCTGTCTATGAATCA+CGG + chr6_4:43346674-43346693 None:intergenic 35.0%
CTGTTAGTTATCCGAGAAAA+TGG - chr6_4:43346847-43346866 Msa0988790:CDS 35.0%
! TTTCGGTTAGACTCTTTTCA+TGG - chr6_4:43347178-43347197 Msa0988790:intron 35.0%
! TTCGGTTAGACTCTTTTCAT+GGG - chr6_4:43347179-43347198 Msa0988790:intron 35.0%
!!! TGGTGTTTTCGTTGATAGTT+AGG - chr6_4:43347218-43347237 Msa0988790:intron 35.0%
ATTACCGGGTTGTCAAATAT+CGG - chr6_4:43347277-43347296 Msa0988790:intron 35.0%
!!! GTGGTTGATATTTTGACAAC+CGG - chr6_4:43347315-43347334 Msa0988790:intron 35.0%
CGCCATAAAATAAAACACCA+TGG + chr6_4:43347369-43347388 None:intergenic 35.0%
!! CTCTAGAATACGAGAAAGAA+TGG - chr6_4:43347832-43347851 Msa0988790:intron 35.0%
AATACGAGAAAGAATGGAAG+CGG - chr6_4:43347838-43347857 Msa0988790:intron 35.0%
AACAAAATGGATGCTAAGCA+AGG - chr6_4:43348073-43348092 Msa0988790:intron 35.0%
ACAAAATGGATGCTAAGCAA+GGG - chr6_4:43348074-43348093 Msa0988790:intron 35.0%
ACTACTTAATGCTTTAGCAG+AGG - chr6_4:43348127-43348146 Msa0988790:intron 35.0%
CTTGCATGATAAGATGTTTG+AGG - chr6_4:43348262-43348281 Msa0988790:CDS 35.0%
TCTTAATGGTGTTCAGCTAA+GGG + chr6_4:43348578-43348597 None:intergenic 35.0%
TTCTTAATGGTGTTCAGCTA+AGG + chr6_4:43348579-43348598 None:intergenic 35.0%
!! TAGTCTTACTGGCTTCTTAA+TGG + chr6_4:43348592-43348611 None:intergenic 35.0%
! ATGGAATACAGTAGTCTTAC+TGG + chr6_4:43348603-43348622 None:intergenic 35.0%
GTAAGACTACTGTATTCCAT+TGG - chr6_4:43348603-43348622 Msa0988790:intron 35.0%
AAAAAAAATGAGCAAGGGAG+AGG - chr6_4:43348638-43348657 Msa0988790:intron 35.0%
! CTCCTCTTACTCTATGATTT+TGG + chr6_4:43348671-43348690 None:intergenic 35.0%
AATGAAAACTGAGGCAGAAA+AGG - chr6_4:43348703-43348722 Msa0988790:CDS 35.0%
ATGAAAACTGAGGCAGAAAA+GGG - chr6_4:43348704-43348723 Msa0988790:CDS 35.0%
! CTTTTCAGTATAGATGCAAG+TGG - chr6_4:43348945-43348964 Msa0988790:intron 35.0%
TGGTATGGATGGAATCTATA+AGG - chr6_4:43348986-43349005 Msa0988790:intron 35.0%
GGTATGGATGGAATCTATAA+GGG - chr6_4:43348987-43349006 Msa0988790:intron 35.0%
GTTATTTATAGACAGGCCTA+GGG - chr6_4:43349045-43349064 Msa0988790:intron 35.0%
TTATTTATAGACAGGCCTAG+GGG - chr6_4:43349046-43349065 Msa0988790:intron 35.0%
!! TTTGATCAGTAGCTTTAGTG+TGG - chr6_4:43349284-43349303 Msa0988790:intron 35.0%
ACAATCCAGTCCTATATTCT+AGG + chr6_4:43349376-43349395 None:intergenic 35.0%
TCTCTTGCAGTCAGTTATTT+GGG + chr6_4:43349483-43349502 None:intergenic 35.0%
ATCTCTTGCAGTCAGTTATT+TGG + chr6_4:43349484-43349503 None:intergenic 35.0%
GAGATAACTACAGTTATGTG+AGG - chr6_4:43349499-43349518 Msa0988790:intron 35.0%
ATTGAGACAACAGAACTACT+AGG + chr6_4:43349653-43349672 None:intergenic 35.0%
! TAGTAGTTCTGTTGTCTCAA+TGG - chr6_4:43349652-43349671 Msa0988790:intron 35.0%
AGAAGAGACTTCAGAGTTAA+TGG - chr6_4:43349880-43349899 Msa0988790:intron 35.0%
GAAGTATAACGAGAGAAAGA+TGG - chr6_4:43349995-43350014 Msa0988790:intron 35.0%
ACTAGCAGATAAGTTTCTGT+TGG - chr6_4:43350028-43350047 Msa0988790:intron 35.0%
TCGCGTGTAACTAACATTAA+TGG + chr6_4:43350054-43350073 None:intergenic 35.0%
AAAATGTAAGCCTGACAATC+TGG - chr6_4:43350159-43350178 Msa0988790:CDS 35.0%
TGGTAGCCATTTCATTTATG+AGG - chr6_4:43350182-43350201 Msa0988790:intron 35.0%
TCTACTTCAGATTCCTGAAA+TGG - chr6_4:43350236-43350255 Msa0988790:intron 35.0%
! GGGTGATTTTCAATGCATAT+AGG - chr6_4:43350372-43350391 Msa0988790:five_prime_UTR 35.0%
!! GAAGTGGATGATGATGGATT+TGG + chr6_4:43346000-43346019 None:intergenic 40.0%
!! TGATGTATGTAAGGTTGGTG+TGG + chr6_4:43346022-43346041 None:intergenic 40.0%
! ACTTGCTGCTGATGTATGTA+AGG + chr6_4:43346031-43346050 None:intergenic 40.0%
!! AGTGAAAGCATTACTGCTTG+TGG + chr6_4:43346129-43346148 None:intergenic 40.0%
! AAGGTATTTGCTGCTGCAAA+AGG - chr6_4:43346300-43346319 Msa0988790:three_prime_UTR 40.0%
TTCCAAACTCGAGGATATCT+TGG + chr6_4:43346333-43346352 None:intergenic 40.0%
AAACGAATATAGCGAATGCG+AGG + chr6_4:43346418-43346437 None:intergenic 40.0%
GTCAATGTCACTGTCGTATT+TGG + chr6_4:43346467-43346486 None:intergenic 40.0%
CTGTCTATGAATCACGGATT+AGG + chr6_4:43346668-43346687 None:intergenic 40.0%
! GTATTATGTCGTGTTGGTGT+AGG - chr6_4:43346885-43346904 Msa0988790:intron 40.0%
!!! GCACCGACTCTTTTAATCAA+AGG + chr6_4:43346941-43346960 None:intergenic 40.0%
GAAGTCAATGTATCCTTTGG+CGG - chr6_4:43347111-43347130 Msa0988790:intron 40.0%
AAGTCAATGTATCCTTTGGC+GGG - chr6_4:43347112-43347131 Msa0988790:intron 40.0%
TTTATGGCGGTTCAAAATGG+TGG - chr6_4:43347380-43347399 Msa0988790:intron 40.0%
CGATTACAAATGGCAGAACA+AGG + chr6_4:43347421-43347440 None:intergenic 40.0%
! ACAGCGTTGTCGATTACAAA+TGG + chr6_4:43347431-43347450 None:intergenic 40.0%
!!! CTCTTAGTGGCTAGTCTTTT+GGG - chr6_4:43347584-43347603 Msa0988790:intron 40.0%
!! ACCTTAGGCTGATTTTTCCT+TGG - chr6_4:43347658-43347677 Msa0988790:intron 40.0%
TCCAAGGAAAAATCAGCCTA+AGG + chr6_4:43347662-43347681 None:intergenic 40.0%
CCAGAAATGCAAATCATCCA+AGG + chr6_4:43347678-43347697 None:intergenic 40.0%
! CCTTGGATGATTTGCATTTC+TGG - chr6_4:43347675-43347694 Msa0988790:intron 40.0%
! TCTTGATACCTATGTCGCTT+GGG - chr6_4:43347767-43347786 Msa0988790:intron 40.0%
AGAATGGAAGCGGATAATAC+AGG - chr6_4:43347848-43347867 Msa0988790:intron 40.0%
GTTCCTTCTTTGGATAGCTT+CGG - chr6_4:43348007-43348026 Msa0988790:intron 40.0%
TTCCTTCTTTGGATAGCTTC+GGG - chr6_4:43348008-43348027 Msa0988790:intron 40.0%
AAGGGTCAAGGAAAGACAAT+GGG - chr6_4:43348092-43348111 Msa0988790:intron 40.0%
! TTCAGCTAAGGGCTATTTCA+GGG + chr6_4:43348567-43348586 None:intergenic 40.0%
GATAGGATATGAGCGAACAA+AGG - chr6_4:43348726-43348745 Msa0988790:CDS 40.0%
TCCTGAAGATTTCCTGGATA+TGG - chr6_4:43348782-43348801 Msa0988790:intron 40.0%
TCCATATCCAGGAAATCTTC+AGG + chr6_4:43348786-43348805 None:intergenic 40.0%
CGTTATTTATAGACAGGCCT+AGG - chr6_4:43349044-43349063 Msa0988790:intron 40.0%
CTAACAATTAAGTCACCCCT+AGG + chr6_4:43349064-43349083 None:intergenic 40.0%
AAGGAGAGGATAAGGGTTTA+GGG - chr6_4:43349249-43349268 Msa0988790:intron 40.0%
!! CTATATTCTAGGACCAAGGA+CGG + chr6_4:43349365-43349384 None:intergenic 40.0%
!! AGTCCTATATTCTAGGACCA+AGG + chr6_4:43349369-43349388 None:intergenic 40.0%
TTGGTCCTAGAATATAGGAC+TGG - chr6_4:43349368-43349387 Msa0988790:intron 40.0%
GAATATAGGACTGGATTGTG+CGG - chr6_4:43349377-43349396 Msa0988790:intron 40.0%
AATATAGGACTGGATTGTGC+GGG - chr6_4:43349378-43349397 Msa0988790:intron 40.0%
CATGTAGGTATTTGCAGACA+TGG - chr6_4:43349610-43349629 Msa0988790:intron 40.0%
AGTTCTGTTGTCTCAATGGT+TGG - chr6_4:43349656-43349675 Msa0988790:intron 40.0%
GGAAATGTCTTCAAAGAGCT+AGG - chr6_4:43349677-43349696 Msa0988790:intron 40.0%
CTTCAAAGAGCTAGGTATGA+TGG - chr6_4:43349685-43349704 Msa0988790:intron 40.0%
AAAAATATCCACCACCGCAA+TGG - chr6_4:43349729-43349748 Msa0988790:intron 40.0%
AAAATATCCACCACCGCAAT+GGG - chr6_4:43349730-43349749 Msa0988790:intron 40.0%
TATCTATATTCCCATTGCGG+TGG + chr6_4:43349743-43349762 None:intergenic 40.0%
! AAGGAAAGCGTGTAAGAATC+AGG - chr6_4:43349768-43349787 Msa0988790:intron 40.0%
! AGGAAAGCGTGTAAGAATCA+GGG - chr6_4:43349769-43349788 Msa0988790:intron 40.0%
GACAATGTTCAACCAAATCC+AGG - chr6_4:43349836-43349855 Msa0988790:intron 40.0%
GGATGATGAACAATTCGAAC+AGG - chr6_4:43349901-43349920 Msa0988790:intron 40.0%
!! GGATGCCGATTTAAAATGCA+TGG - chr6_4:43349922-43349941 Msa0988790:intron 40.0%
AGGTAAGGTGAAGACACTTT+AGG - chr6_4:43350113-43350132 Msa0988790:CDS 40.0%
!! CTTCAATTCAGCATTGACAC+TGG + chr6_4:43350301-43350320 None:intergenic 40.0%
!! ATGTAAGGTTGGTGTGGAAG+TGG + chr6_4:43346016-43346035 None:intergenic 45.0%
GCTGCTGATGTATGTAAGGT+TGG + chr6_4:43346027-43346046 None:intergenic 45.0%
!! GAAAGCATTACTGCTTGTGG+CGG + chr6_4:43346126-43346145 None:intergenic 45.0%
ACTCGAGGATATCTTGGTCT+TGG + chr6_4:43346327-43346346 None:intergenic 45.0%
GACCAAGATATCCTCGAGTT+TGG - chr6_4:43346328-43346347 Msa0988790:three_prime_UTR 45.0%
GTCTGTATCTGTGTTGTGTC+TGG + chr6_4:43346532-43346551 None:intergenic 45.0%
!! CACATTTGTCGGTGTTGTGT+TGG - chr6_4:43346726-43346745 Msa0988790:CDS 45.0%
ATGGCCGATATTTGACAACC+CGG + chr6_4:43347284-43347303 None:intergenic 45.0%
TTGTCAAATATCGGCCATGC+TGG - chr6_4:43347286-43347305 Msa0988790:intron 45.0%
CTCTTTCAACAGTGACCATG+TGG + chr6_4:43347504-43347523 None:intergenic 45.0%
CAATGTTATGAGTTCCACGC+CGG - chr6_4:43347561-43347580 Msa0988790:intron 45.0%
! AAAGACTAGCCACTAAGAGC+CGG + chr6_4:43347583-43347602 None:intergenic 45.0%
!!! GCTCTTAGTGGCTAGTCTTT+TGG - chr6_4:43347583-43347602 Msa0988790:intron 45.0%
!!! TAGTGGCTAGTCTTTTGGGT+TGG - chr6_4:43347588-43347607 Msa0988790:intron 45.0%
!! TTGGGTTGGACTCTCTTCAT+CGG - chr6_4:43347602-43347621 Msa0988790:intron 45.0%
CTCTTGATACCTATGTCGCT+TGG - chr6_4:43347766-43347785 Msa0988790:intron 45.0%
!! TTCTAGTTCCCAAGCGACAT+AGG + chr6_4:43347778-43347797 None:intergenic 45.0%
TCCTTCTTTGGATAGCTTCG+GGG - chr6_4:43348009-43348028 Msa0988790:intron 45.0%
CAAGGGTCAAGGAAAGACAA+TGG - chr6_4:43348091-43348110 Msa0988790:intron 45.0%
TTGACGAAGCAGAAGAGCTT+TGG - chr6_4:43348159-43348178 Msa0988790:intron 45.0%
! TCAGCTAAGGGCTATTTCAG+GGG + chr6_4:43348566-43348585 None:intergenic 45.0%
! GTTCAGCTAAGGGCTATTTC+AGG + chr6_4:43348568-43348587 None:intergenic 45.0%
AACTGAGGCAGAAAAGGGAT+AGG - chr6_4:43348709-43348728 Msa0988790:CDS 45.0%
CAGGATTCCTGAAGATTTCC+TGG - chr6_4:43348776-43348795 Msa0988790:intron 45.0%
AGATTTCCTGGATATGGAGC+AGG - chr6_4:43348788-43348807 Msa0988790:intron 45.0%
! CAAACACCGAGTTTTTCTCG+AGG - chr6_4:43349215-43349234 Msa0988790:intron 45.0%
GGACTTCCTCGAGAAAAACT+CGG + chr6_4:43349224-43349243 None:intergenic 45.0%
TCCAAACCAAGGAGAGGATA+AGG - chr6_4:43349241-43349260 Msa0988790:intron 45.0%
CCAAACCAAGGAGAGGATAA+GGG - chr6_4:43349242-43349261 Msa0988790:intron 45.0%
CTAAACCCTTATCCTCTCCT+TGG + chr6_4:43349250-43349269 None:intergenic 45.0%
CAAGGAGAGGATAAGGGTTT+AGG - chr6_4:43349248-43349267 Msa0988790:intron 45.0%
CGTCCTTGGTCCTAGAATAT+AGG - chr6_4:43349363-43349382 Msa0988790:intron 45.0%
GTAGGTATTTGCAGACATGG+AGG - chr6_4:43349613-43349632 Msa0988790:intron 45.0%
ACCAAATCCAGGCTTAAGAG+AGG - chr6_4:43349847-43349866 Msa0988790:intron 45.0%
TCCTCTCTTAAGCCTGGATT+TGG + chr6_4:43349851-43349870 None:intergenic 45.0%
CTATCTTCCTCTCTTAAGCC+TGG + chr6_4:43349857-43349876 None:intergenic 45.0%
CTTACCTCGTAACAGCATGT+AGG + chr6_4:43350100-43350119 None:intergenic 45.0%
CTACATGCTGTTACGAGGTA+AGG - chr6_4:43350098-43350117 Msa0988790:CDS 45.0%
ATGTAAGCCTGACAATCTGG+TGG - chr6_4:43350162-43350181 Msa0988790:CDS 45.0%
!!! ATTTTTATGATTTTATTATA+AGG - chr6_4:43346281-43346300 Msa0988790:three_prime_UTR 5.0%
GGTGTGGAAGTGGATGATGA+TGG + chr6_4:43346006-43346025 None:intergenic 50.0%
!!! TTGCGGCCAGTTTTGGGTTT+TGG + chr6_4:43346076-43346095 None:intergenic 50.0%
! CGAGATTTGCGGCCAGTTTT+GGG + chr6_4:43346082-43346101 None:intergenic 50.0%
CCAAAACTGGCCGCAAATCT+CGG - chr6_4:43346080-43346099 Msa0988790:three_prime_UTR 50.0%
CAAAACTGGCCGCAAATCTC+GGG - chr6_4:43346081-43346100 Msa0988790:three_prime_UTR 50.0%
CTTACTCAGCCCGAGATTTG+CGG + chr6_4:43346093-43346112 None:intergenic 50.0%
TGTGAAAGATGCCGTCACCA+TGG - chr6_4:43347349-43347368 Msa0988790:intron 50.0%
TGAAAGAGTGAAAGCCGTCG+TGG - chr6_4:43347516-43347535 Msa0988790:intron 50.0%
! TTTAGAGCCGACATCCACGA+CGG + chr6_4:43347533-43347552 None:intergenic 50.0%
!! GTGGATGTCGGCTCTAAAAG+AGG - chr6_4:43347535-43347554 Msa0988790:intron 50.0%
!! GATGTCGGCTCTAAAAGAGG+TGG - chr6_4:43347538-43347557 Msa0988790:intron 50.0%
TGGATGCTAAGCAAGGGTCA+AGG - chr6_4:43348080-43348099 Msa0988790:intron 50.0%
GCTCTTCTGCTTCGTCAACT+CGG + chr6_4:43348157-43348176 None:intergenic 50.0%
TACAACTGAAGAGTCGCGCT+CGG + chr6_4:43348885-43348904 None:intergenic 50.0%
TCTCGAGGAAGTCCAAACCA+AGG - chr6_4:43349230-43349249 Msa0988790:intron 50.0%
AGGAAGTCCAAACCAAGGAG+AGG - chr6_4:43349235-43349254 Msa0988790:intron 50.0%
CCCTTATCCTCTCCTTGGTT+TGG + chr6_4:43349245-43349264 None:intergenic 50.0%
GAGAGGATAAGGGTTTAGGG+AGG - chr6_4:43349252-43349271 Msa0988790:intron 50.0%
TAAACATACGGCTCCGTCCT+TGG - chr6_4:43349349-43349368 Msa0988790:intron 50.0%
CTATATTCCCATTGCGGTGG+TGG + chr6_4:43349740-43349759 None:intergenic 50.0%
CGTGTAAGAATCAGGGTGCA+AGG - chr6_4:43349776-43349795 Msa0988790:intron 50.0%
GACTCCTACATGCTGTTACG+AGG - chr6_4:43350093-43350112 Msa0988790:intron 50.0%
ATGGCTACCACCAGATTGTC+AGG + chr6_4:43350172-43350191 None:intergenic 50.0%
ATCGTGGACTTCGCCATTTC+AGG + chr6_4:43350252-43350271 None:intergenic 50.0%
TGCCCGCCAAAACCCAAAAC+TGG - chr6_4:43346067-43346086 Msa0988790:three_prime_UTR 55.0%
!!! GGCCAGTTTTGGGTTTTGGC+GGG + chr6_4:43346072-43346091 None:intergenic 55.0%
!!! CGGCCAGTTTTGGGTTTTGG+CGG + chr6_4:43346073-43346092 None:intergenic 55.0%
! CCGAGATTTGCGGCCAGTTT+TGG + chr6_4:43346083-43346102 None:intergenic 55.0%
AGCATTACTGCTTGTGGCGG+TGG + chr6_4:43346123-43346142 None:intergenic 55.0%
CTCTGACACGACACTGACAC+AGG + chr6_4:43346611-43346630 None:intergenic 55.0%
GATTAGGCGTGTCCTGGAGT+CGG + chr6_4:43346652-43346671 None:intergenic 55.0%
!! ATCACGGATTAGGCGTGTCC+TGG + chr6_4:43346658-43346677 None:intergenic 55.0%
TGTATCCTTTGGCGGGACCA+TGG - chr6_4:43347119-43347138 Msa0988790:intron 55.0%
TAGTGAAGGGATGTCCGCCA+TGG + chr6_4:43347139-43347158 None:intergenic 55.0%
ATATCGGCCATGCTGGATCG+CGG - chr6_4:43347293-43347312 Msa0988790:intron 55.0%
GTGAAAGCCGTCGTGGATGT+CGG - chr6_4:43347523-43347542 Msa0988790:intron 55.0%
GCCCCGAAGCTATCCAAAGA+AGG + chr6_4:43348013-43348032 None:intergenic 55.0%
! GGCTATTTCAGGGGACCGAA+TGG + chr6_4:43348557-43348576 None:intergenic 55.0%
TCACGTCCTGCTCCATATCC+AGG + chr6_4:43348797-43348816 None:intergenic 55.0%
GATATGGAGCAGGACGTGAG+TGG - chr6_4:43348798-43348817 Msa0988790:intron 55.0%
TCCTGGAGTCGGACACACGT+CGG + chr6_4:43346641-43346660 None:intergenic 60.0%
ATCCTTTGGCGGGACCATGG+CGG - chr6_4:43347122-43347141 Msa0988790:intron 60.0%
TCAACCACCGCGATCCAGCA+TGG + chr6_4:43347303-43347322 None:intergenic 60.0%
!! AGTTCCACGCCGGCTCTTAG+TGG - chr6_4:43347571-43347590 Msa0988790:intron 60.0%
GGAGCAGGACGTGAGTGGAA+TGG - chr6_4:43348803-43348822 Msa0988790:intron 60.0%
GCAGGACGTGAGTGGAATGG+AGG - chr6_4:43348806-43348825 Msa0988790:intron 60.0%
CTGCTTGTGGCGGTGGCTGA+TGG + chr6_4:43346116-43346135 None:intergenic 65.0%
ACCGACGTGTGTCCGACTCC+AGG - chr6_4:43346637-43346656 Msa0988790:CDS 65.0%
CTAGCCACTAAGAGCCGGCG+TGG + chr6_4:43347578-43347597 None:intergenic 65.0%
GTCCGCCATGGTCCCGCCAA+AGG + chr6_4:43347127-43347146 None:intergenic 70.0%
TCGGCCATGCTGGATCGCGG+TGG - chr6_4:43347296-43347315 Msa0988790:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 43345961 43350537 43345961 ID=Msa0988790;Name=Msa0988790
chr6_4 mRNA 43345961 43350537 43345961 ID=Msa0988790-mRNA-1;Parent=Msa0988790;Name=Msa0988790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=177|0.75|0.8|1|1|1|5|534|292
chr6_4 exon 43345961 43346881 43345961 ID=Msa0988790-mRNA-1:exon:10053;Parent=Msa0988790-mRNA-1
chr6_4 exon 43348215 43348427 43348215 ID=Msa0988790-mRNA-1:exon:10052;Parent=Msa0988790-mRNA-1
chr6_4 exon 43348677 43348772 43348677 ID=Msa0988790-mRNA-1:exon:10051;Parent=Msa0988790-mRNA-1
chr6_4 exon 43350094 43350195 43350094 ID=Msa0988790-mRNA-1:exon:10050;Parent=Msa0988790-mRNA-1
chr6_4 exon 43350280 43350537 43350280 ID=Msa0988790-mRNA-1:exon:10049;Parent=Msa0988790-mRNA-1
chr6_4 five_prime_UTR 43350361 43350537 43350361 ID=Msa0988790-mRNA-1:five_prime_utr;Parent=Msa0988790-mRNA-1
chr6_4 CDS 43350280 43350360 43350280 ID=Msa0988790-mRNA-1:cds;Parent=Msa0988790-mRNA-1
chr6_4 CDS 43350094 43350195 43350094 ID=Msa0988790-mRNA-1:cds;Parent=Msa0988790-mRNA-1
chr6_4 CDS 43348677 43348772 43348677 ID=Msa0988790-mRNA-1:cds;Parent=Msa0988790-mRNA-1
chr6_4 CDS 43348215 43348427 43348215 ID=Msa0988790-mRNA-1:cds;Parent=Msa0988790-mRNA-1
chr6_4 CDS 43346495 43346881 43346495 ID=Msa0988790-mRNA-1:cds;Parent=Msa0988790-mRNA-1
chr6_4 three_prime_UTR 43345961 43346494 43345961 ID=Msa0988790-mRNA-1:three_prime_utr;Parent=Msa0988790-mRNA-1
Gene Sequence

>Msa0988790

ATGCTTTCACTCATTAATTCGCCTCTACTTATTGCTAAACCATACCAACAAATTAACATATCAAATAAACGAAGCATTGTTGTATTTGCTGCTGCAAAAGGTCCAAGACCAAGATATCCTCGAGTTTGGAAGACTAATAAAAAAATTGGGACTATTTCTAAGGCTGCTAAGCTTGTTCAATCTATTAAAGAACTTTCAAATGTCAAAGAAGAAGTTTATGGAGCTCTTGATACCTATGTCGCTTGGGAACTAGAATTTCCTATAATTACAGTGAAAAAGGTAACAAAATGGATGCTAAGCAAGGGTCAAGGAAAGACAATGGGAAGCTATTTTACACTACTTAATGCTTTAGCAGAGGATGACCGAGTTGACGAAGCAGAAGAGCTTTGGACAAAGCTATTAATGCAGTACACGGAAAGCTTGCCACGTAGATTCTTTGATAAAATGATATCTATCTACTGTAAAAGAGGCTTGCATGATAAGATGTTTGAGGTATTTGCAGACATGGAGGAGCTTAGTGTTAAACCTAGTAGTTCTGTTGTCTCAATGGTTGGAAATGTCTTCAAAGAGCTAGGTATGATGGATAAATACGAGAAGTTACATCAAAAATATCCACCACCGCAATGGGAATATAGATACATCAAAGGAAAGCGTGTAAGAATCAGGGTGCAAGGTCAGCCTAATAAAGTCGATAGATACGTAAGAAAGCATGACAATGTTCAACCAAATCCAGGCTTAAGAGAGGAAGATAGTTCAGAAGAGACTTCAGAGTTAATGGATGATGAACAATTCGAACAGGATGCCGATTTAAAATGCATGGAAACCAAACAAATTTCAGATGATTCATCTGAGTTTATGGAACCAAATTTAGAAGTATAA

Protein sequence

>Msa0988790

MLSLINSPLLIAKPYQQINISNKRSIVVFAAAKGPRPRYPRVWKTNKKIGTISKAAKLVQSIKELSNVKEEVYGALDTYVAWELEFPIITVKKVTKWMLSKGQGKTMGSYFTLLNALAEDDRVDEAEELWTKLLMQYTESLPRRFFDKMISIYCKRGLHDKMFEVFADMEELSVKPSSSVVSMVGNVFKELGMMDKYEKLHQKYPPPQWEYRYIKGKRVRIRVQGQPNKVDRYVRKHDNVQPNPGLREEDSSEETSELMDDEQFEQDADLKCMETKQISDDSSEFMEPNLEV*