Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799110 | XP_003612049.1 | 97.720 | 307 | 7 | 0 | 2 | 308 | 3 | 309 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799110 | sp|Q9FUW6|BETV6_BETPN | 73.701 | 308 | 81 | 0 | 1 | 308 | 1 | 308 | 1.09e-166 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799110 | B7FHV0 | 97.720 | 307 | 7 | 0 | 2 | 308 | 3 | 309 | 0.0 | 615 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0799110 | 0.824229 | 9.038639e-54 | -8.615850e-47 |
| Msa0004990 | Msa0799110 | 0.814600 | 1.418496e-51 | -8.615850e-47 |
| Msa0005560 | Msa0799110 | 0.808032 | 3.779425e-50 | -8.615850e-47 |
| Msa0011010 | Msa0799110 | 0.817445 | 3.285537e-52 | -8.615850e-47 |
| Msa0011040 | Msa0799110 | 0.811788 | 5.876262e-51 | -8.615850e-47 |
| Msa0014590 | Msa0799110 | 0.804049 | 2.603319e-49 | -8.615850e-47 |
| Msa0017710 | Msa0799110 | 0.823296 | 1.495281e-53 | -8.615850e-47 |
| Msa0019470 | Msa0799110 | 0.812149 | 4.901808e-51 | -8.615850e-47 |
| Msa0019570 | Msa0799110 | 0.807190 | 5.705695e-50 | -8.615850e-47 |
| Msa0024650 | Msa0799110 | 0.823996 | 1.025421e-53 | -8.615850e-47 |
| Msa0036550 | Msa0799110 | 0.822687 | 2.073608e-53 | -8.615850e-47 |
| Msa0038010 | Msa0799110 | 0.812981 | 3.224698e-51 | -8.615850e-47 |
| Msa0046390 | Msa0799110 | 0.818458 | 1.939588e-52 | -8.615850e-47 |
| Msa0048380 | Msa0799110 | 0.826582 | 2.506403e-54 | -8.615850e-47 |
| Msa0051910 | Msa0799110 | 0.831565 | 1.552925e-55 | -8.615850e-47 |
| Msa0053040 | Msa0799110 | 0.812958 | 3.262701e-51 | -8.615850e-47 |
| Msa0054050 | Msa0799110 | 0.817030 | 4.074004e-52 | -8.615850e-47 |
| Msa0059880 | Msa0799110 | 0.804205 | 2.415171e-49 | -8.615850e-47 |
| Msa0063540 | Msa0799110 | 0.800205 | 1.607577e-48 | -8.615850e-47 |
| Msa0073110 | Msa0799110 | 0.803326 | 3.677974e-49 | -8.615850e-47 |
| Msa0085110 | Msa0799110 | 0.800300 | 1.537736e-48 | -8.615850e-47 |
| Msa0095910 | Msa0799110 | 0.804307 | 2.300493e-49 | -8.615850e-47 |
| Msa0098380 | Msa0799110 | 0.831031 | 2.101485e-55 | -8.615850e-47 |
| Msa0099890 | Msa0799110 | 0.825757 | 3.938537e-54 | -8.615850e-47 |
| Msa0100200 | Msa0799110 | 0.809076 | 2.262913e-50 | -8.615850e-47 |
| Msa0107830 | Msa0799110 | 0.830416 | 2.974112e-55 | -8.615850e-47 |
| Msa0111780 | Msa0799110 | 0.834931 | 2.253161e-56 | -8.615850e-47 |
| Msa0117650 | Msa0799110 | 0.817634 | 2.977999e-52 | -8.615850e-47 |
| Msa0120450 | Msa0799110 | 0.832048 | 1.180277e-55 | -8.615850e-47 |
| Msa0603310 | Msa0799110 | 0.811608 | 6.429510e-51 | -8.615850e-47 |
| Msa0604200 | Msa0799110 | 0.814380 | 1.587028e-51 | -8.615850e-47 |
| Msa0604280 | Msa0799110 | 0.827874 | 1.229166e-54 | -8.615850e-47 |
| Msa0606600 | Msa0799110 | 0.815030 | 1.138830e-51 | -8.615850e-47 |
| Msa0610190 | Msa0799110 | 0.814654 | 1.379887e-51 | -8.615850e-47 |
| Msa0614960 | Msa0799110 | 0.869761 | 2.429538e-66 | -8.615850e-47 |
| Msa0619030 | Msa0799110 | -0.808269 | 3.364899e-50 | -8.615850e-47 |
| Msa0626980 | Msa0799110 | 0.800483 | 1.410844e-48 | -8.615850e-47 |
| Msa0627360 | Msa0799110 | 0.803477 | 3.421869e-49 | -8.615850e-47 |
| Msa0628200 | Msa0799110 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0629160 | Msa0799110 | 0.800752 | 1.243836e-48 | -8.615850e-47 |
| Msa0631700 | Msa0799110 | 0.810160 | 1.323302e-50 | -8.615850e-47 |
| Msa0637590 | Msa0799110 | 0.801829 | 7.485729e-49 | -8.615850e-47 |
| Msa0637700 | Msa0799110 | 0.817399 | 3.364852e-52 | -8.615850e-47 |
| Msa0644340 | Msa0799110 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0646230 | Msa0799110 | 0.804163 | 2.464378e-49 | -8.615850e-47 |
| Msa0647300 | Msa0799110 | 0.835123 | 2.014702e-56 | -8.615850e-47 |
| Msa0651820 | Msa0799110 | 0.831680 | 1.454881e-55 | -8.615850e-47 |
| Msa0652590 | Msa0799110 | 0.853871 | 1.794543e-61 | -8.615850e-47 |
| Msa0652600 | Msa0799110 | 0.825700 | 4.063614e-54 | -8.615850e-47 |
| Msa0652610 | Msa0799110 | 0.809404 | 1.923959e-50 | -8.615850e-47 |
| Msa0655370 | Msa0799110 | 0.870459 | 1.436448e-66 | -8.615850e-47 |
| Msa0655430 | Msa0799110 | 0.814458 | 1.524728e-51 | -8.615850e-47 |
| Msa0666950 | Msa0799110 | 0.803081 | 4.133007e-49 | -8.615850e-47 |
| Msa0670360 | Msa0799110 | 0.826628 | 2.444465e-54 | -8.615850e-47 |
| Msa0675620 | Msa0799110 | 0.829982 | 3.795428e-55 | -8.615850e-47 |
| Msa0679220 | Msa0799110 | 0.840403 | 8.880923e-58 | -8.615850e-47 |
| Msa0680460 | Msa0799110 | 0.823493 | 1.344775e-53 | -8.615850e-47 |
| Msa0684170 | Msa0799110 | 0.817650 | 2.954786e-52 | -8.615850e-47 |
| Msa0685390 | Msa0799110 | -0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0686830 | Msa0799110 | 0.834242 | 3.357003e-56 | -8.615850e-47 |
| Msa0689840 | Msa0799110 | 0.826277 | 2.963716e-54 | -8.615850e-47 |
| Msa0699170 | Msa0799110 | 0.870295 | 1.625258e-66 | -8.615850e-47 |
| Msa0708680 | Msa0799110 | 0.805631 | 1.215785e-49 | -8.615850e-47 |
| Msa0711230 | Msa0799110 | 0.802603 | 5.188032e-49 | -8.615850e-47 |
| Msa0711240 | Msa0799110 | 0.832177 | 1.097218e-55 | -8.615850e-47 |
| Msa0711250 | Msa0799110 | 0.809699 | 1.663107e-50 | -8.615850e-47 |
| Msa0715250 | Msa0799110 | 0.806620 | 7.530841e-50 | -8.615850e-47 |
| Msa0716620 | Msa0799110 | 0.830185 | 3.386126e-55 | -8.615850e-47 |
| Msa0716630 | Msa0799110 | 0.964802 | 8.682404e-124 | -8.615850e-47 |
| Msa0716980 | Msa0799110 | 0.835210 | 1.916440e-56 | -8.615850e-47 |
| Msa0717030 | Msa0799110 | 0.809440 | 1.890482e-50 | -8.615850e-47 |
| Msa0718770 | Msa0799110 | 0.812561 | 3.984197e-51 | -8.615850e-47 |
| Msa0720810 | Msa0799110 | 0.822146 | 2.768927e-53 | -8.615850e-47 |
| Msa0728520 | Msa0799110 | 0.806063 | 9.866065e-50 | -8.615850e-47 |
| Msa0731580 | Msa0799110 | 0.835436 | 1.680050e-56 | -8.615850e-47 |
| Msa0732970 | Msa0799110 | 0.816624 | 5.023337e-52 | -8.615850e-47 |
| Msa0736560 | Msa0799110 | 0.807290 | 5.432537e-50 | -8.615850e-47 |
| Msa0738570 | Msa0799110 | 0.812787 | 3.556980e-51 | -8.615850e-47 |
| Msa0738680 | Msa0799110 | 0.837234 | 5.860779e-57 | -8.615850e-47 |
| Msa0743370 | Msa0799110 | 0.805387 | 1.367863e-49 | -8.615850e-47 |
| Msa0744710 | Msa0799110 | 0.840210 | 9.972460e-58 | -8.615850e-47 |
| Msa0745160 | Msa0799110 | 0.807149 | 5.819669e-50 | -8.615850e-47 |
| Msa0747710 | Msa0799110 | 0.816337 | 5.826778e-52 | -8.615850e-47 |
| Msa0750790 | Msa0799110 | 0.837165 | 6.105143e-57 | -8.615850e-47 |
| Msa0750830 | Msa0799110 | 0.873277 | 1.665751e-67 | -8.615850e-47 |
| Msa0751510 | Msa0799110 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0751960 | Msa0799110 | 0.822340 | 2.496694e-53 | -8.615850e-47 |
| Msa0768670 | Msa0799110 | 0.805753 | 1.146414e-49 | -8.615850e-47 |
| Msa0771810 | Msa0799110 | 0.827307 | 1.681925e-54 | -8.615850e-47 |
| Msa0772350 | Msa0799110 | 0.856793 | 2.529177e-62 | -8.615850e-47 |
| Msa0773960 | Msa0799110 | 0.814978 | 1.169599e-51 | -8.615850e-47 |
| Msa0774660 | Msa0799110 | 0.810442 | 1.150202e-50 | -8.615850e-47 |
| Msa0776540 | Msa0799110 | 0.803798 | 2.935510e-49 | -8.615850e-47 |
| Msa0789220 | Msa0799110 | 0.802908 | 4.486566e-49 | -8.615850e-47 |
| Msa0789780 | Msa0799110 | 0.800503 | 1.398205e-48 | -8.615850e-47 |
| Msa0792410 | Msa0799110 | 0.816542 | 5.241031e-52 | -8.615850e-47 |
| Msa0792890 | Msa0799110 | 0.802806 | 4.710857e-49 | -8.615850e-47 |
| Msa0794200 | Msa0799110 | 0.835482 | 1.635498e-56 | -8.615850e-47 |
| Msa0794240 | Msa0799110 | 0.820869 | 5.460898e-53 | -8.615850e-47 |
| Msa0795320 | Msa0799110 | 0.806835 | 6.780598e-50 | -8.615850e-47 |
| Msa0798240 | Msa0799110 | 0.802384 | 5.754568e-49 | -8.615850e-47 |
| Msa0799110 | Msa0799120 | 0.967131 | 7.416216e-127 | -8.615850e-47 |
| Msa0799110 | Msa0802080 | 0.816848 | 4.475231e-52 | -8.615850e-47 |
| Msa0799110 | Msa0802600 | 0.820787 | 5.703031e-53 | -8.615850e-47 |
| Msa0799110 | Msa0803560 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0799110 | Msa0809920 | 0.832401 | 9.656365e-56 | -8.615850e-47 |
| Msa0799110 | Msa0812050 | 0.805534 | 1.274581e-49 | -8.615850e-47 |
| Msa0799110 | Msa0814160 | 0.820823 | 5.595535e-53 | -8.615850e-47 |
| Msa0799110 | Msa0817190 | 0.806576 | 7.694071e-50 | -8.615850e-47 |
| Msa0799110 | Msa0819110 | 0.808144 | 3.578113e-50 | -8.615850e-47 |
| Msa0799110 | Msa0819150 | 0.824852 | 6.446484e-54 | -8.615850e-47 |
| Msa0799110 | Msa0826240 | 0.842964 | 1.873997e-58 | -8.615850e-47 |
| Msa0799110 | Msa0827800 | 0.814184 | 1.753455e-51 | -8.615850e-47 |
| Msa0799110 | Msa0828910 | 0.806798 | 6.905185e-50 | -8.615850e-47 |
| Msa0799110 | Msa0829990 | 0.809634 | 1.717098e-50 | -8.615850e-47 |
| Msa0799110 | Msa0830930 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0799110 | Msa0831310 | 0.801281 | 9.696602e-49 | -8.615850e-47 |
| Msa0799110 | Msa0838210 | 0.810035 | 1.408171e-50 | -8.615850e-47 |
| Msa0799110 | Msa0847140 | 0.816315 | 5.891937e-52 | -8.615850e-47 |
| Msa0799110 | Msa0848270 | 0.815805 | 7.658838e-52 | -8.615850e-47 |
| Msa0799110 | Msa0850480 | 0.835365 | 1.750996e-56 | -8.615850e-47 |
| Msa0799110 | Msa0854840 | 0.815938 | 7.152605e-52 | -8.615850e-47 |
| Msa0799110 | Msa0859270 | 0.806390 | 8.419801e-50 | -8.615850e-47 |
| Msa0799110 | Msa0863840 | 0.809970 | 1.454175e-50 | -8.615850e-47 |
| Msa0799110 | Msa0864160 | 0.801512 | 8.695495e-49 | -8.615850e-47 |
| Msa0799110 | Msa0869660 | 0.806678 | 7.321487e-50 | -8.615850e-47 |
| Msa0799110 | Msa0874750 | 0.848359 | 6.446351e-60 | -8.615850e-47 |
| Msa0799110 | Msa0886370 | 0.819694 | 1.015025e-52 | -8.615850e-47 |
| Msa0799110 | Msa0890210 | 0.816375 | 5.711342e-52 | -8.615850e-47 |
| Msa0799110 | Msa0903020 | 0.811797 | 5.848083e-51 | -8.615850e-47 |
| Msa0799110 | Msa0904590 | 0.802223 | 6.210948e-49 | -8.615850e-47 |
| Msa0799110 | Msa0910560 | 0.833864 | 4.174682e-56 | -8.615850e-47 |
| Msa0799110 | Msa0910590 | 0.842391 | 2.661806e-58 | -8.615850e-47 |
| Msa0799110 | Msa0913500 | 0.819087 | 1.395816e-52 | -8.615850e-47 |
| Msa0799110 | Msa0921860 | 0.814974 | 1.171858e-51 | -8.615850e-47 |
| Msa0799110 | Msa0936630 | 0.815496 | 8.975628e-52 | -8.615850e-47 |
| Msa0799110 | Msa0940780 | 0.804239 | 2.376854e-49 | -8.615850e-47 |
| Msa0799110 | Msa0945320 | 0.803895 | 2.802355e-49 | -8.615850e-47 |
| Msa0799110 | Msa0945330 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0799110 | Msa0948430 | 0.846680 | 1.865280e-59 | -8.615850e-47 |
| Msa0799110 | Msa0962290 | 0.802356 | 5.832517e-49 | -8.615850e-47 |
| Msa0799110 | Msa0970270 | 0.806061 | 9.878290e-50 | -8.615850e-47 |
| Msa0799110 | Msa0975950 | 0.800793 | 1.220011e-48 | -8.615850e-47 |
| Msa0799110 | Msa0976400 | 0.845807 | 3.225917e-59 | -8.615850e-47 |
| Msa0799110 | Msa0985380 | 0.852766 | 3.722327e-61 | -8.615850e-47 |
| Msa0799110 | Msa0987020 | 0.816321 | 5.874322e-52 | -8.615850e-47 |
| Msa0799110 | Msa0987550 | 0.833804 | 4.320935e-56 | -8.615850e-47 |
| Msa0799110 | Msa1003730 | 0.815000 | 1.156776e-51 | -8.615850e-47 |
| Msa0799110 | Msa1003920 | 0.804897 | 1.732784e-49 | -8.615850e-47 |
| Msa0799110 | Msa1005370 | 0.821753 | 3.414476e-53 | -8.615850e-47 |
| Msa0799110 | Msa1006030 | 0.801648 | 8.153113e-49 | -8.615850e-47 |
| Msa0799110 | Msa1022490 | 0.802284 | 6.034167e-49 | -8.615850e-47 |
| Msa0799110 | Msa1022510 | 0.806703 | 7.233217e-50 | -8.615850e-47 |
| Msa0799110 | Msa1024420 | 0.828893 | 6.979897e-55 | -8.615850e-47 |
| Msa0799110 | Msa1029860 | 0.847721 | 9.669296e-60 | -8.615850e-47 |
| Msa0799110 | Msa1031060 | 0.844902 | 5.668322e-59 | -8.615850e-47 |
| Msa0799110 | Msa1035050 | 0.830391 | 3.014856e-55 | -8.615850e-47 |
| Msa0799110 | Msa1036590 | 0.815552 | 8.720849e-52 | -8.615850e-47 |
| Msa0799110 | Msa1040330 | 0.830585 | 2.702701e-55 | -8.615850e-47 |
| Msa0799110 | Msa1047300 | 0.804791 | 1.823364e-49 | -8.615850e-47 |
| Msa0799110 | Msa1047340 | 0.804894 | 1.735465e-49 | -8.615850e-47 |
| Msa0799110 | Msa1056890 | 0.802664 | 5.038700e-49 | -8.615850e-47 |
| Msa0799110 | Msa1061670 | 0.801974 | 6.988380e-49 | -8.615850e-47 |
| Msa0799110 | Msa1061840 | 0.809291 | 2.035061e-50 | -8.615850e-47 |
| Msa0799110 | Msa1062070 | 0.809856 | 1.539000e-50 | -8.615850e-47 |
| Msa0799110 | Msa1064940 | 0.822035 | 2.938167e-53 | -8.615850e-47 |
| Msa0799110 | Msa1068780 | 0.845828 | 3.184131e-59 | -8.615850e-47 |
| Msa0799110 | Msa1071350 | 0.834850 | 2.361512e-56 | -8.615850e-47 |
| Msa0799110 | Msa1075090 | 0.831179 | 1.932570e-55 | -8.615850e-47 |
| Msa0799110 | Msa1076900 | 0.815394 | 9.457535e-52 | -8.615850e-47 |
| Msa0799110 | Msa1078730 | 0.801526 | 8.637897e-49 | -8.615850e-47 |
| Msa0799110 | Msa1084800 | 0.819453 | 1.152267e-52 | -8.615850e-47 |
| Msa0799110 | Msa1085820 | 0.830328 | 3.123825e-55 | -8.615850e-47 |
| Msa0799110 | Msa1090990 | 0.803005 | 4.285084e-49 | -8.615850e-47 |
| Msa0799110 | Msa1100330 | 0.822060 | 2.898814e-53 | -8.615850e-47 |
| Msa0799110 | Msa1103450 | 0.823940 | 1.056683e-53 | -8.615850e-47 |
| Msa0799110 | Msa1106960 | 0.802622 | 5.140654e-49 | -8.615850e-47 |
| Msa0799110 | Msa1107220 | 0.813122 | 3.002838e-51 | -8.615850e-47 |
| Msa0799110 | Msa1107520 | 0.803376 | 3.590423e-49 | -8.615850e-47 |
| Msa0799110 | Msa1108560 | 0.820559 | 6.435672e-53 | -8.615850e-47 |
| Msa0799110 | Msa1108610 | 0.804573 | 2.024254e-49 | -8.615850e-47 |
| Msa0799110 | Msa1109880 | 0.802426 | 5.642364e-49 | -8.615850e-47 |
| Msa0799110 | Msa1110900 | 0.838805 | 2.311563e-57 | -8.615850e-47 |
| Msa0799110 | Msa1115980 | 0.811131 | 8.162420e-51 | -8.615850e-47 |
| Msa0799110 | Msa1119670 | 0.855374 | 6.586961e-62 | -8.615850e-47 |
| Msa0799110 | Msa1120960 | 0.861101 | 1.299633e-63 | -8.615850e-47 |
| Msa0799110 | Msa1121080 | 0.803936 | 2.748252e-49 | -8.615850e-47 |
| Msa0799110 | Msa1124220 | 0.825857 | 3.728716e-54 | -8.615850e-47 |
| Msa0799110 | Msa1127940 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0799110 | Msa1131120 | 0.839361 | 1.659670e-57 | -8.615850e-47 |
| Msa0799110 | Msa1133850 | 0.800693 | 1.278469e-48 | -8.615850e-47 |
| Msa0799110 | Msa1136630 | 0.813686 | 2.257955e-51 | -8.615850e-47 |
| Msa0799110 | Msa1142600 | 0.819802 | 9.592434e-53 | -8.615850e-47 |
| Msa0799110 | Msa1147010 | 0.820330 | 7.259959e-53 | -8.615850e-47 |
| Msa0799110 | Msa1150750 | 0.805490 | 1.301614e-49 | -8.615850e-47 |
| Msa0799110 | Msa1152330 | 0.809095 | 2.241240e-50 | -8.615850e-47 |
| Msa0799110 | Msa1153690 | 0.808702 | 2.719842e-50 | -8.615850e-47 |
| Msa0799110 | Msa1156240 | 0.804017 | 2.642901e-49 | -8.615850e-47 |
| Msa0799110 | Msa1156670 | 0.805431 | 1.339445e-49 | -8.615850e-47 |
| Msa0799110 | Msa1156740 | 0.840964 | 6.330403e-58 | -8.615850e-47 |
| Msa0799110 | Msa1157210 | 0.807865 | 4.102905e-50 | -8.615850e-47 |
| Msa0799110 | Msa1160540 | 0.816556 | 5.204251e-52 | -8.615850e-47 |
| Msa0799110 | Msa1163710 | 0.819498 | 1.125159e-52 | -8.615850e-47 |
| Msa0799110 | Msa1165860 | 0.812517 | 4.073791e-51 | -8.615850e-47 |
| Msa0799110 | Msa1186430 | 0.830465 | 2.891906e-55 | -8.615850e-47 |
| Msa0799110 | Msa1191270 | 0.843439 | 1.400370e-58 | -8.615850e-47 |
| Msa0799110 | Msa1191350 | 0.803724 | 3.041602e-49 | -8.615850e-47 |
| Msa0799110 | Msa1202110 | 0.814677 | 1.364207e-51 | -8.615850e-47 |
| Msa0799110 | Msa1208050 | 0.822936 | 1.813647e-53 | -8.615850e-47 |
| Msa0799110 | Msa1208140 | 0.827997 | 1.148173e-54 | -8.615850e-47 |
| Msa0799110 | Msa1211320 | 0.807366 | 5.235939e-50 | -8.615850e-47 |
| Msa0799110 | Msa1223540 | 0.807885 | 4.061128e-50 | -8.615850e-47 |
| Msa0799110 | Msa1223960 | 0.843379 | 1.452543e-58 | -8.615850e-47 |
| Msa0799110 | Msa1223990 | 0.841933 | 3.518671e-58 | -8.615850e-47 |
| Msa0799110 | Msa1239050 | 0.820710 | 5.940095e-53 | -8.615850e-47 |
| Msa0799110 | Msa1239190 | 0.801424 | 9.063858e-49 | -8.615850e-47 |
| Msa0799110 | Msa1239940 | 0.806988 | 6.296363e-50 | -8.615850e-47 |
| Msa0799110 | Msa1240710 | 0.834438 | 2.997516e-56 | -8.615850e-47 |
| Msa0799110 | Msa1254870 | 0.814807 | 1.276765e-51 | -8.615850e-47 |
| Msa0799110 | Msa1259570 | 0.817815 | 2.711651e-52 | -8.615850e-47 |
| Msa0799110 | Msa1263110 | 0.822139 | 2.779847e-53 | -8.615850e-47 |
| Msa0799110 | Msa1263120 | 0.816272 | 6.024134e-52 | -8.615850e-47 |
| Msa0799110 | Msa1269500 | 0.801617 | 8.274005e-49 | -8.615850e-47 |
| Msa0799110 | Msa1273320 | 0.813551 | 2.417631e-51 | -8.615850e-47 |
| Msa0799110 | Msa1279750 | 0.813589 | 2.371040e-51 | -8.615850e-47 |
| Msa0799110 | Msa1280540 | 0.809767 | 1.607595e-50 | -8.615850e-47 |
| Msa0799110 | Msa1296490 | 0.818513 | 1.885204e-52 | -8.615850e-47 |
| Msa0799110 | Msa1308240 | 0.802772 | 4.787903e-49 | -8.615850e-47 |
| Msa0799110 | Msa1316960 | 0.841372 | 4.945173e-58 | -8.615850e-47 |
| Msa0799110 | Msa1317740 | 0.803062 | 4.171166e-49 | -8.615850e-47 |
| Msa0799110 | Msa1319030 | 0.802351 | 5.845369e-49 | -8.615850e-47 |
| Msa0799110 | Msa1319190 | 0.807656 | 4.543956e-50 | -8.615850e-47 |
| Msa0799110 | Msa1319760 | 0.808979 | 2.372664e-50 | -8.615850e-47 |
| Msa0799110 | Msa1320160 | 0.835649 | 1.483736e-56 | -8.615850e-47 |
| Msa0799110 | Msa1322500 | 0.808032 | 3.780693e-50 | -8.615850e-47 |
| Msa0799110 | Msa1328430 | 0.813010 | 3.177883e-51 | -8.615850e-47 |
| Msa0799110 | Msa1338510 | 0.829957 | 3.849284e-55 | -8.615850e-47 |
| Msa0799110 | Msa1341030 | 0.805423 | 1.344543e-49 | -8.615850e-47 |
| Msa0799110 | Msa1348620 | 0.813234 | 2.837341e-51 | -8.615850e-47 |
| Msa0799110 | Msa1349420 | 0.825651 | 4.173792e-54 | -8.615850e-47 |
| Msa0799110 | Msa1355340 | 0.810821 | 9.525729e-51 | -8.615850e-47 |
| Msa0799110 | Msa1357840 | 0.814224 | 1.717939e-51 | -8.615850e-47 |
| Msa0799110 | Msa1359520 | 0.810439 | 1.152058e-50 | -8.615850e-47 |
| Msa0799110 | Msa1364690 | 0.831044 | 2.085955e-55 | -8.615850e-47 |
| Msa0799110 | Msa1366480 | 0.804553 | 2.044331e-49 | -8.615850e-47 |
| Msa0799110 | Msa1377190 | 0.806320 | 8.709548e-50 | -8.615850e-47 |
| Msa0799110 | Msa1377460 | 0.810057 | 1.392585e-50 | -8.615850e-47 |
| Msa0799110 | Msa1384130 | 0.800626 | 1.319646e-48 | -8.615850e-47 |
| Msa0799110 | Msa1395720 | 0.827448 | 1.555676e-54 | -8.615850e-47 |
| Msa0799110 | Msa1396550 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0799110 | Msa1399030 | 0.837019 | 6.651224e-57 | -8.615850e-47 |
| Msa0799110 | Msa1417220 | 0.816715 | 4.792922e-52 | -8.615850e-47 |
| Msa0799110 | Msa1434700 | 0.800594 | 1.339255e-48 | -8.615850e-47 |
| Msa0799110 | Msa1437590 | 0.829607 | 4.684037e-55 | -8.615850e-47 |
| Msa0799110 | Msa1445780 | 0.827594 | 1.435098e-54 | -8.615850e-47 |
| Msa0799110 | Msa1455360 | 0.816114 | 6.533219e-52 | -8.615850e-47 |
| Msa0799110 | Msa1458270 | 0.811335 | 7.369711e-51 | -8.615850e-47 |
| Msa0799110 | Msa1462610 | 0.819082 | 1.399771e-52 | -8.615850e-47 |
| Msa0121320 | Msa0799110 | 0.808419 | 3.125827e-50 | -8.615850e-47 |
| Msa0125860 | Msa0799110 | 0.814740 | 1.321081e-51 | -8.615850e-47 |
| Msa0129290 | Msa0799110 | 0.838014 | 3.698622e-57 | -8.615850e-47 |
| Msa0130710 | Msa0799110 | 0.805228 | 1.477306e-49 | -8.615850e-47 |
| Msa0132250 | Msa0799110 | 0.813959 | 1.965812e-51 | -8.615850e-47 |
| Msa0136090 | Msa0799110 | 0.813133 | 2.986497e-51 | -8.615850e-47 |
| Msa0150640 | Msa0799110 | 0.811685 | 6.186510e-51 | -8.615850e-47 |
| Msa0150910 | Msa0799110 | 0.814914 | 1.208415e-51 | -8.615850e-47 |
| Msa0163690 | Msa0799110 | 0.831013 | 2.123404e-55 | -8.615850e-47 |
| Msa0164350 | Msa0799110 | 0.803087 | 4.120301e-49 | -8.615850e-47 |
| Msa0166030 | Msa0799110 | 0.804568 | 2.029127e-49 | -8.615850e-47 |
| Msa0166180 | Msa0799110 | 0.807008 | 6.233248e-50 | -8.615850e-47 |
| Msa0175060 | Msa0799110 | 0.818150 | 2.278133e-52 | -8.615850e-47 |
| Msa0176600 | Msa0799110 | 0.805919 | 1.057878e-49 | -8.615850e-47 |
| Msa0177550 | Msa0799110 | 0.819524 | 1.110266e-52 | -8.615850e-47 |
| Msa0186240 | Msa0799110 | 0.810232 | 1.277094e-50 | -8.615850e-47 |
| Msa0190670 | Msa0799110 | 0.800607 | 1.331284e-48 | -8.615850e-47 |
| Msa0190890 | Msa0799110 | 0.809869 | 1.528668e-50 | -8.615850e-47 |
| Msa0196420 | Msa0799110 | 0.810808 | 9.590111e-51 | -8.615850e-47 |
| Msa0200090 | Msa0799110 | 0.820485 | 6.691428e-53 | -8.615850e-47 |
| Msa0207640 | Msa0799110 | 0.803404 | 3.543576e-49 | -8.615850e-47 |
| Msa0224590 | Msa0799110 | 0.823976 | 1.036425e-53 | -8.615850e-47 |
| Msa0233210 | Msa0799110 | 0.822300 | 2.550441e-53 | -8.615850e-47 |
| Msa0238330 | Msa0799110 | 0.821831 | 3.276224e-53 | -8.615850e-47 |
| Msa0366510 | Msa0799110 | 0.815453 | 9.176070e-52 | -8.615850e-47 |
| Msa0370620 | Msa0799110 | 0.806281 | 8.877911e-50 | -8.615850e-47 |
| Msa0374470 | Msa0799110 | 0.819337 | 1.224606e-52 | -8.615850e-47 |
| Msa0374560 | Msa0799110 | 0.809066 | 2.273606e-50 | -8.615850e-47 |
| Msa0374600 | Msa0799110 | 0.820942 | 5.254136e-53 | -8.615850e-47 |
| Msa0390200 | Msa0799110 | 0.827635 | 1.402786e-54 | -8.615850e-47 |
| Msa0391600 | Msa0799110 | 0.819482 | 1.135057e-52 | -8.615850e-47 |
| Msa0393820 | Msa0799110 | 0.802246 | 6.144677e-49 | -8.615850e-47 |
| Msa0396860 | Msa0799110 | 0.821881 | 3.189618e-53 | -8.615850e-47 |
| Msa0397190 | Msa0799110 | 0.809673 | 1.684923e-50 | -8.615850e-47 |
| Msa0401420 | Msa0799110 | 0.807500 | 4.903587e-50 | -8.615850e-47 |
| Msa0405200 | Msa0799110 | 0.811773 | 5.920327e-51 | -8.615850e-47 |
| Msa0414480 | Msa0799110 | 0.821414 | 4.088760e-53 | -8.615850e-47 |
| Msa0415010 | Msa0799110 | 0.805210 | 1.490194e-49 | -8.615850e-47 |
| Msa0420890 | Msa0799110 | 0.823597 | 1.271384e-53 | -8.615850e-47 |
| Msa0423220 | Msa0799110 | 0.811359 | 7.281157e-51 | -8.615850e-47 |
| Msa0423630 | Msa0799110 | 0.825186 | 5.378486e-54 | -8.615850e-47 |
| Msa0433090 | Msa0799110 | 0.819824 | 9.479305e-53 | -8.615850e-47 |
| Msa0438520 | Msa0799110 | 0.829457 | 5.092783e-55 | -8.615850e-47 |
| Msa0443040 | Msa0799110 | 0.821704 | 3.505504e-53 | -8.615850e-47 |
| Msa0444210 | Msa0799110 | 0.825522 | 4.477529e-54 | -8.615850e-47 |
| Msa0444400 | Msa0799110 | 0.806404 | 8.362187e-50 | -8.615850e-47 |
| Msa0449500 | Msa0799110 | 0.808605 | 2.852490e-50 | -8.615850e-47 |
| Msa0459930 | Msa0799110 | 0.833698 | 4.592625e-56 | -8.615850e-47 |
| Msa0464310 | Msa0799110 | 0.817103 | 3.922713e-52 | -8.615850e-47 |
| Msa0470420 | Msa0799110 | 0.822860 | 1.889860e-53 | -8.615850e-47 |
| Msa0478080 | Msa0799110 | 0.800086 | 1.699848e-48 | -8.615850e-47 |
| Msa0240580 | Msa0799110 | 0.806423 | 8.285396e-50 | -8.615850e-47 |
| Msa0242720 | Msa0799110 | 0.844789 | 6.081945e-59 | -8.615850e-47 |
| Msa0247780 | Msa0799110 | 0.813697 | 2.245021e-51 | -8.615850e-47 |
| Msa0248320 | Msa0799110 | 0.802753 | 4.831171e-49 | -8.615850e-47 |
| Msa0251120 | Msa0799110 | 0.802560 | 5.294286e-49 | -8.615850e-47 |
| Msa0257760 | Msa0799110 | 0.804144 | 2.486966e-49 | -8.615850e-47 |
| Msa0258010 | Msa0799110 | 0.810155 | 1.326499e-50 | -8.615850e-47 |
| Msa0259300 | Msa0799110 | 0.801232 | 9.920432e-49 | -8.615850e-47 |
| Msa0265650 | Msa0799110 | 0.844278 | 8.347486e-59 | -8.615850e-47 |
| Msa0269710 | Msa0799110 | 0.803962 | 2.714152e-49 | -8.615850e-47 |
| Msa0271700 | Msa0799110 | 0.830650 | 2.606559e-55 | -8.615850e-47 |
| Msa0271720 | Msa0799110 | 0.822647 | 2.117910e-53 | -8.615850e-47 |
| Msa0275730 | Msa0799110 | 0.835693 | 1.445965e-56 | -8.615850e-47 |
| Msa0276780 | Msa0799110 | 0.808469 | 3.050749e-50 | -8.615850e-47 |
| Msa0278960 | Msa0799110 | 0.814878 | 1.230855e-51 | -8.615850e-47 |
| Msa0303650 | Msa0799110 | 0.802716 | 4.915923e-49 | -8.615850e-47 |
| Msa0303900 | Msa0799110 | 0.809543 | 1.796355e-50 | -8.615850e-47 |
| Msa0307630 | Msa0799110 | 0.817332 | 3.483496e-52 | -8.615850e-47 |
| Msa0308740 | Msa0799110 | 0.819987 | 8.702107e-53 | -8.615850e-47 |
| Msa0310190 | Msa0799110 | 0.838495 | 2.779717e-57 | -8.615850e-47 |
| Msa0316230 | Msa0799110 | 0.816454 | 5.484674e-52 | -8.615850e-47 |
| Msa0320170 | Msa0799110 | 0.832143 | 1.118547e-55 | -8.615850e-47 |
| Msa0323090 | Msa0799110 | 0.800319 | 1.523807e-48 | -8.615850e-47 |
| Msa0325260 | Msa0799110 | 0.805620 | 1.222576e-49 | -8.615850e-47 |
| Msa0333770 | Msa0799110 | 0.802481 | 5.497726e-49 | -8.615850e-47 |
| Msa0346170 | Msa0799110 | 0.834462 | 2.955749e-56 | -8.615850e-47 |
| Msa0347320 | Msa0799110 | 0.811887 | 5.591204e-51 | -8.615850e-47 |
| Msa0348370 | Msa0799110 | 0.819927 | 8.982694e-53 | -8.615850e-47 |
| Msa0349910 | Msa0799110 | 0.827571 | 1.453775e-54 | -8.615850e-47 |
| Msa0350180 | Msa0799110 | 0.813193 | 2.896856e-51 | -8.615850e-47 |
| Msa0354600 | Msa0799110 | 0.814005 | 1.920000e-51 | -8.615850e-47 |
| Msa0357470 | Msa0799110 | 0.831362 | 1.742920e-55 | -8.615850e-47 |
| Msa0357510 | Msa0799110 | 0.829287 | 5.599525e-55 | -8.615850e-47 |
| Msa0357530 | Msa0799110 | 0.830608 | 2.668159e-55 | -8.615850e-47 |
| Msa0357550 | Msa0799110 | 0.827774 | 1.299348e-54 | -8.615850e-47 |
| Msa0357560 | Msa0799110 | 0.821335 | 4.264418e-53 | -8.615850e-47 |
| Msa0489370 | Msa0799110 | 0.826836 | 2.180225e-54 | -8.615850e-47 |
| Msa0490060 | Msa0799110 | 0.808747 | 2.660649e-50 | -8.615850e-47 |
| Msa0490100 | Msa0799110 | 0.831664 | 1.468546e-55 | -8.615850e-47 |
| Msa0491780 | Msa0799110 | 0.801709 | 7.921855e-49 | -8.615850e-47 |
| Msa0491960 | Msa0799110 | 0.809953 | 1.466667e-50 | -8.615850e-47 |
| Msa0497680 | Msa0799110 | 0.817204 | 3.723328e-52 | -8.615850e-47 |
| Msa0522140 | Msa0799110 | 0.805458 | 1.322245e-49 | -8.615850e-47 |
| Msa0522170 | Msa0799110 | 0.812231 | 4.705023e-51 | -8.615850e-47 |
| Msa0524710 | Msa0799110 | 0.829532 | 4.883023e-55 | -8.615850e-47 |
| Msa0525400 | Msa0799110 | 0.819482 | 1.135029e-52 | -8.615850e-47 |
| Msa0535570 | Msa0799110 | 0.833630 | 4.775760e-56 | -8.615850e-47 |
| Msa0538520 | Msa0799110 | 0.802868 | 4.573046e-49 | -8.615850e-47 |
| Msa0538650 | Msa0799110 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0540640 | Msa0799110 | 0.809611 | 1.737299e-50 | -8.615850e-47 |
| Msa0549170 | Msa0799110 | 0.817370 | 3.415448e-52 | -8.615850e-47 |
| Msa0557240 | Msa0799110 | 0.812974 | 3.236622e-51 | -8.615850e-47 |
| Msa0561110 | Msa0799110 | 0.800490 | 1.406371e-48 | -8.615850e-47 |
| Msa0561830 | Msa0799110 | 0.863640 | 2.154669e-64 | -8.615850e-47 |
| Msa0574420 | Msa0799110 | 0.815088 | 1.105524e-51 | -8.615850e-47 |
| Msa0584370 | Msa0799110 | 0.803869 | 2.837526e-49 | -8.615850e-47 |
| Msa0587730 | Msa0799110 | 0.835722 | 1.422326e-56 | -8.615850e-47 |
| Msa0587930 | Msa0799110 | 0.803891 | 2.808142e-49 | -8.615850e-47 |
| Msa0597170 | Msa0799110 | 0.824325 | 8.581973e-54 | -8.615850e-47 |
| Msa0597800 | Msa0799110 | 0.823862 | 1.102286e-53 | -8.615850e-47 |
| Msa0597820 | Msa0799110 | 0.855315 | 6.850006e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799110 | MtrunA17_Chr5g0404471 | 97.720 | 307 | 7 | 0 | 2 | 308 | 3 | 309 | 0.0 | 615 |
| Msa0799110 | MtrunA17_Chr3g0141681 | 69.677 | 310 | 92 | 1 | 1 | 308 | 1 | 310 | 1.41e-157 | 442 |
| Msa0799110 | MtrunA17_Chr3g0144701 | 68.421 | 304 | 96 | 0 | 5 | 308 | 9 | 312 | 3.02e-157 | 441 |
| Msa0799110 | MtrunA17_Chr3g0141691 | 66.234 | 308 | 104 | 0 | 1 | 308 | 1 | 308 | 5.13e-152 | 428 |
| Msa0799110 | MtrunA17_Chr5g0404481 | 60.188 | 319 | 115 | 3 | 1 | 308 | 1 | 318 | 5.11e-136 | 388 |
| Msa0799110 | MtrunA17_Chr5g0404511 | 59.875 | 319 | 116 | 3 | 1 | 308 | 1 | 318 | 1.31e-135 | 387 |
| Msa0799110 | MtrunA17_Chr4g0035131 | 59.934 | 302 | 121 | 0 | 3 | 304 | 43 | 344 | 1.40e-135 | 388 |
| Msa0799110 | MtrunA17_Chr4g0035111 | 59.000 | 300 | 123 | 0 | 5 | 304 | 7 | 306 | 9.37e-132 | 377 |
| Msa0799110 | MtrunA17_Chr4g0035121 | 48.377 | 308 | 157 | 1 | 3 | 308 | 2 | 309 | 1.23e-104 | 308 |
| Msa0799110 | MtrunA17_Chr5g0409651 | 48.387 | 310 | 152 | 3 | 4 | 307 | 3 | 310 | 8.42e-97 | 288 |
| Msa0799110 | MtrunA17_Chr8g0369391 | 47.452 | 314 | 154 | 5 | 3 | 308 | 2 | 312 | 4.86e-94 | 281 |
| Msa0799110 | MtrunA17_Chr5g0409641 | 47.419 | 310 | 155 | 3 | 4 | 307 | 3 | 310 | 1.20e-93 | 280 |
| Msa0799110 | MtrunA17_Chr3g0078901 | 44.373 | 311 | 161 | 5 | 2 | 308 | 3 | 305 | 1.64e-90 | 272 |
| Msa0799110 | MtrunA17_Chr3g0078831 | 44.516 | 310 | 162 | 5 | 2 | 308 | 3 | 305 | 4.33e-86 | 261 |
| Msa0799110 | MtrunA17_Chr1g0198771 | 39.286 | 308 | 184 | 2 | 3 | 308 | 12 | 318 | 6.89e-75 | 233 |
| Msa0799110 | MtrunA17_Chr3g0078941 | 41.463 | 205 | 115 | 3 | 104 | 308 | 12 | 211 | 3.18e-51 | 168 |
| Msa0799110 | MtrunA17_Chr3g0078951 | 51.887 | 106 | 47 | 3 | 2 | 106 | 3 | 105 | 4.32e-24 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799110 | AT1G75280.1 | 68.730 | 307 | 93 | 2 | 3 | 307 | 4 | 309 | 2.67e-153 | 431 |
| Msa0799110 | AT4G39230.1 | 67.208 | 308 | 101 | 0 | 1 | 308 | 1 | 308 | 1.32e-151 | 427 |
| Msa0799110 | AT1G75290.1 | 66.234 | 308 | 102 | 1 | 2 | 307 | 3 | 310 | 2.65e-151 | 427 |
| Msa0799110 | AT1G75290.2 | 66.234 | 308 | 102 | 1 | 2 | 307 | 30 | 337 | 9.20e-151 | 426 |
| Msa0799110 | AT1G75300.1 | 60.681 | 323 | 104 | 3 | 3 | 307 | 4 | 321 | 3.97e-137 | 391 |
| Msa0799110 | AT1G19540.1 | 61.364 | 308 | 115 | 2 | 5 | 308 | 3 | 310 | 2.41e-131 | 376 |
| Msa0799110 | AT1G19540.2 | 62.055 | 253 | 92 | 2 | 5 | 253 | 3 | 255 | 1.29e-105 | 309 |
| Msa0799110 | AT4G34540.1 | 46.732 | 306 | 158 | 1 | 3 | 308 | 6 | 306 | 1.27e-102 | 303 |
| Msa0799110 | AT4G13660.1 | 44.728 | 313 | 165 | 3 | 2 | 308 | 7 | 317 | 2.38e-85 | 259 |
| Msa0799110 | AT4G13660.2 | 44.728 | 313 | 165 | 3 | 2 | 308 | 7 | 317 | 2.38e-85 | 259 |
| Msa0799110 | AT1G32100.1 | 44.872 | 312 | 164 | 3 | 3 | 308 | 8 | 317 | 8.19e-85 | 258 |
Find 85 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGATTGAACCTTCTTT+TGG | 0.295444 | 5_3:+12198245 | Msa0799110:CDS |
| TAAGGACATTTATGTCCATT+AGG | 0.299121 | 5_3:+12196845 | Msa0799110:five_prime_UTR |
| AGTTCACATGTTACAACTAA+TGG | 0.308221 | 5_3:+12196768 | Msa0799110:five_prime_UTR |
| TAACCAATACTACATTGTTT+TGG | 0.324456 | 5_3:-12198372 | None:intergenic |
| AGGTTTCTCCCATCTGAATT+CGG | 0.325701 | 5_3:+12197519 | Msa0799110:CDS |
| GGTCACTCCATGTCAGTAAA+AGG | 0.328140 | 5_3:+12198209 | Msa0799110:CDS |
| TTTGGTGAAGATGTTTGTTT+TGG | 0.334785 | 5_3:-12198343 | None:intergenic |
| GAAGCTCATAGCAGCAATAA+AGG | 0.339367 | 5_3:+12197392 | Msa0799110:CDS |
| CCCTACGTTTGCTTTGATTA+GGG | 0.343683 | 5_3:+12197088 | Msa0799110:CDS |
| AATGCCAACATTAAGTTTGC+AGG | 0.362145 | 5_3:-12198185 | None:intergenic |
| GCAAACTTAATGTTGGCATT+AGG | 0.367347 | 5_3:+12198188 | Msa0799110:CDS |
| ATTTCCTCTAACGCCTTTGC+CGG | 0.380008 | 5_3:+12197648 | Msa0799110:CDS |
| GGTTTCTCCCATCTGAATTC+GGG | 0.391935 | 5_3:+12197520 | Msa0799110:CDS |
| GGATTGATTAAGCTATTTGT+AGG | 0.406150 | 5_3:-12196880 | None:intergenic |
| ATCCTAGTCCTAGGAGGAAC+AGG | 0.406954 | 5_3:+12197020 | Msa0799110:CDS |
| ACCCTACGTTTGCTTTGATT+AGG | 0.407851 | 5_3:+12197087 | Msa0799110:CDS |
| CAACTTCTTAAGAGCATTCA+AGG | 0.411478 | 5_3:+12198034 | Msa0799110:CDS |
| AAGGACATTTATGTCCATTA+GGG | 0.413349 | 5_3:+12196846 | Msa0799110:five_prime_UTR |
| GGATACTTCCTCCCTACATT+AGG | 0.421807 | 5_3:+12197669 | Msa0799110:CDS |
| CGCGATAAAGTGGTTATTCT+CGG | 0.431870 | 5_3:+12197717 | Msa0799110:CDS |
| GTATCCGGCAAAGGCGTTAG+AGG | 0.431925 | 5_3:-12197652 | None:intergenic |
| CTATGTAACCTGTTCCTCCT+AGG | 0.434671 | 5_3:-12197028 | None:intergenic |
| TGTGAACTACTTGAAGTTGT+TGG | 0.435657 | 5_3:-12196753 | None:intergenic |
| CTCTTAAGAAGTTGATCCTC+TGG | 0.437434 | 5_3:-12198025 | None:intergenic |
| GATGTTGTTATTTCTACCCT+TGG | 0.438929 | 5_3:+12197345 | Msa0799110:CDS |
| AACATTAAGTTTGCAGGGAA+AGG | 0.451104 | 5_3:-12198179 | None:intergenic |
| CAATGAGCTCGTCTCATTGT+GGG | 0.454789 | 5_3:+12197964 | Msa0799110:CDS |
| AAGAGCAAAATCCTAGTCCT+AGG | 0.467088 | 5_3:+12197011 | Msa0799110:CDS |
| TGATCATGAAAGTCTTGTTA+AGG | 0.472479 | 5_3:+12197308 | Msa0799110:CDS |
| ATGTCACGGAGGAAGACATT+GGG | 0.478535 | 5_3:+12197858 | Msa0799110:CDS |
| ATCTCCTCCCCGCGATAAAG+TGG | 0.484319 | 5_3:+12197707 | Msa0799110:CDS |
| TTAGAGGAAATATAAGTGTA+AGG | 0.491091 | 5_3:-12197636 | None:intergenic |
| AGGACAGCACCATTCCCTAA+TGG | 0.492064 | 5_3:-12196860 | None:intergenic |
| TAATGTAGGGAGGAAGTATC+CGG | 0.493259 | 5_3:-12197667 | None:intergenic |
| AAGCCAAAACAATGTAGTAT+TGG | 0.497247 | 5_3:+12198369 | Msa0799110:three_prime_UTR |
| CTTTCACTCAGTAGTGTACA+TGG | 0.505724 | 5_3:-12198486 | None:intergenic |
| GAAGCTTCCACACCAAAAGA+AGG | 0.509807 | 5_3:-12198257 | None:intergenic |
| TTGAAAGTCAAAACATTGGC+AGG | 0.510445 | 5_3:-12197944 | None:intergenic |
| GAGAATAACCACTTTATCGC+GGG | 0.511116 | 5_3:-12197715 | None:intergenic |
| ACCGTAGTGTATTTCACCTC+AGG | 0.514837 | 5_3:-12198290 | None:intergenic |
| TTTCCCTGCAAACTTAATGT+TGG | 0.521151 | 5_3:+12198181 | Msa0799110:CDS |
| AAACTAATGACCATTGACTA+AGG | 0.523156 | 5_3:+12196827 | Msa0799110:five_prime_UTR |
| ACGTCGATCCCGAATTCAGA+TGG | 0.524228 | 5_3:-12197528 | None:intergenic |
| GTTGTTATTTCTACCCTTGG+TGG | 0.526463 | 5_3:+12197348 | Msa0799110:CDS |
| AAAGTGGTTATTCTCGGAGA+TGG | 0.527224 | 5_3:+12197723 | Msa0799110:CDS |
| ACATAAATGTCCTTAGTCAA+TGG | 0.529232 | 5_3:-12196837 | None:intergenic |
| TTGCTGCTATGAGCTTCACT+TGG | 0.536567 | 5_3:-12197386 | None:intergenic |
| TATGTCACGGAGGAAGACAT+TGG | 0.537268 | 5_3:+12197857 | Msa0799110:CDS |
| TCAATGAGCTCGTCTCATTG+TGG | 0.546704 | 5_3:+12197963 | Msa0799110:CDS |
| CCGTCACCATGCTGTTGAGC+CGG | 0.552079 | 5_3:+12197554 | Msa0799110:CDS |
| CCCTAATCAAAGCAAACGTA+GGG | 0.552838 | 5_3:-12197088 | None:intergenic |
| CTCGGAGATGGAAATGTCAA+AGG | 0.554960 | 5_3:+12197735 | Msa0799110:CDS |
| ATGCCAACATTAAGTTTGCA+GGG | 0.559238 | 5_3:-12198184 | None:intergenic |
| ATTGAAGCAAGTGCAAAAGC+AGG | 0.559335 | 5_3:+12197062 | Msa0799110:CDS |
| GGCTTATACAATTAAAGCAG+TGG | 0.564474 | 5_3:+12197880 | Msa0799110:CDS |
| CATTTATGTCCATTAGGGAA+TGG | 0.565762 | 5_3:+12196851 | Msa0799110:five_prime_UTR |
| CTGTGACTGTGCAGATCAAA+GGG | 0.566192 | 5_3:-12196901 | None:intergenic |
| AGAAGGGCAATTGAAGCTGA+AGG | 0.571556 | 5_3:+12197609 | Msa0799110:CDS |
| ATAGCAGCAATAAAGGAAGC+AGG | 0.578178 | 5_3:+12197399 | Msa0799110:CDS |
| GCTGTGACTGTGCAGATCAA+AGG | 0.578724 | 5_3:-12196902 | None:intergenic |
| ATCTACTTGTGCTCCACCAA+GGG | 0.581043 | 5_3:-12197361 | None:intergenic |
| AACCTGTTCCTCCTAGGACT+AGG | 0.582530 | 5_3:-12197022 | None:intergenic |
| CTAGGAGGAACAGGTTACAT+AGG | 0.587363 | 5_3:+12197029 | Msa0799110:CDS |
| ATTACAAAGCAAAATGTGGA+AGG | 0.591312 | 5_3:-12198453 | None:intergenic |
| CTCATTGAAAGTCAAAACAT+TGG | 0.593708 | 5_3:-12197948 | None:intergenic |
| CATCTACTTGTGCTCCACCA+AGG | 0.598179 | 5_3:-12197362 | None:intergenic |
| AAAGGAAGCAGGAAACATCA+AGG | 0.604544 | 5_3:+12197410 | Msa0799110:CDS |
| CCGGCTCAACAGCATGGTGA+CGG | 0.606809 | 5_3:-12197554 | None:intergenic |
| CGAGAAAATTTATGTTCCAG+AGG | 0.609687 | 5_3:+12198009 | Msa0799110:CDS |
| CGTCGATCCCGAATTCAGAT+GGG | 0.611624 | 5_3:-12197527 | None:intergenic |
| TCCCTAATCAAAGCAAACGT+AGG | 0.615940 | 5_3:-12197089 | None:intergenic |
| TAGCTACCGGCTCAACAGCA+TGG | 0.623032 | 5_3:-12197560 | None:intergenic |
| AGCAAAATCCTAGTCCTAGG+AGG | 0.625533 | 5_3:+12197014 | Msa0799110:CDS |
| AATCATTACAAAGCAAAATG+TGG | 0.627458 | 5_3:-12198457 | None:intergenic |
| AAAGTCAAAACATTGGCAGG+AGG | 0.639422 | 5_3:-12197941 | None:intergenic |
| AGGGAGGAAGTATCCGGCAA+AGG | 0.640257 | 5_3:-12197661 | None:intergenic |
| AGCTTCTGAAATCTATCCTG+AGG | 0.644292 | 5_3:+12198274 | Msa0799110:CDS |
| TTTGTTGTCCTAATGTAGGG+AGG | 0.648712 | 5_3:-12197677 | None:intergenic |
| TGTTGTAATTAACTTAACTG+TGG | 0.655800 | 5_3:-12196924 | None:intergenic |
| TGTCACGGAGGAAGACATTG+GGG | 0.662891 | 5_3:+12197859 | Msa0799110:CDS |
| TCCTGAGGTGAAATACACTA+CGG | 0.663677 | 5_3:+12198289 | Msa0799110:CDS |
| AGAATAACCACTTTATCGCG+GGG | 0.675805 | 5_3:-12197714 | None:intergenic |
| CGAGAATAACCACTTTATCG+CGG | 0.677520 | 5_3:-12197716 | None:intergenic |
| ATAACCACTTTATCGCGGGG+AGG | 0.717755 | 5_3:-12197711 | None:intergenic |
| TTTAGGAGTTTATGTCACGG+AGG | 0.734108 | 5_3:+12197847 | Msa0799110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATACAATGTTTTTGA+CGG | - | chr5_3:12196689-12196708 | None:intergenic | 15.0% |
| !!! | GGAATTTTTTTTCTTTAATT+AGG | + | chr5_3:12196976-12196995 | Msa0799110:five_prime_UTR | 15.0% |
| !!! | ATTTCTCATTTTGATTATAT+AGG | + | chr5_3:12197275-12197294 | Msa0799110:intron | 15.0% |
| !!! | TTTCTCATTTTGATTATATA+GGG | + | chr5_3:12197276-12197295 | Msa0799110:intron | 15.0% |
| !!! | TTACACATTGAATTATTTTA+GGG | - | chr5_3:12198107-12198126 | None:intergenic | 15.0% |
| !!! | TTTTTATACAATGTTTTTGA+CGG | - | chr5_3:12196689-12196708 | None:intergenic | 15.0% |
| !!! | GGAATTTTTTTTCTTTAATT+AGG | + | chr5_3:12196976-12196995 | Msa0799110:five_prime_UTR | 15.0% |
| !!! | ATTTCTCATTTTGATTATAT+AGG | + | chr5_3:12197275-12197294 | Msa0799110:intron | 15.0% |
| !!! | TTTCTCATTTTGATTATATA+GGG | + | chr5_3:12197276-12197295 | Msa0799110:intron | 15.0% |
| !!! | TTACACATTGAATTATTTTA+GGG | - | chr5_3:12198107-12198126 | None:intergenic | 15.0% |
| !! | CATTGTATAAAAAATACATG+CGG | + | chr5_3:12196696-12196715 | Msa0799110:five_prime_UTR | 20.0% |
| !!! | ACTTCTTTTAATTTCTACTT+TGG | + | chr5_3:12196955-12196974 | Msa0799110:five_prime_UTR | 20.0% |
| !!! | TTTTTCTTTAATTAGGATCA+TGG | + | chr5_3:12196983-12197002 | Msa0799110:exon | 20.0% |
| !! | CTTGAATTAGCTATATAAAT+TGG | + | chr5_3:12197476-12197495 | Msa0799110:intron | 20.0% |
| !!! | AAACTTTTTTTCTTTCTACA+TGG | + | chr5_3:12197781-12197800 | Msa0799110:intron | 20.0% |
| !!! | ACATTTGAATTTCGTATTTT+AGG | + | chr5_3:12197830-12197849 | Msa0799110:intron | 20.0% |
| !!! | AAAGTATACAATTTTGTTCA+AGG | - | chr5_3:12197918-12197937 | None:intergenic | 20.0% |
| !!! | GTTACACATTGAATTATTTT+AGG | - | chr5_3:12198108-12198127 | None:intergenic | 20.0% |
| !! | CATTGTATAAAAAATACATG+CGG | + | chr5_3:12196696-12196715 | Msa0799110:five_prime_UTR | 20.0% |
| !!! | ACTTCTTTTAATTTCTACTT+TGG | + | chr5_3:12196955-12196974 | Msa0799110:five_prime_UTR | 20.0% |
| !!! | TTTTTCTTTAATTAGGATCA+TGG | + | chr5_3:12196983-12197002 | Msa0799110:exon | 20.0% |
| !! | CTTGAATTAGCTATATAAAT+TGG | + | chr5_3:12197476-12197495 | Msa0799110:intron | 20.0% |
| !!! | AAACTTTTTTTCTTTCTACA+TGG | + | chr5_3:12197781-12197800 | Msa0799110:intron | 20.0% |
| !!! | ACATTTGAATTTCGTATTTT+AGG | + | chr5_3:12197830-12197849 | Msa0799110:intron | 20.0% |
| !!! | AAAGTATACAATTTTGTTCA+AGG | - | chr5_3:12197918-12197937 | None:intergenic | 20.0% |
| !!! | GTTACACATTGAATTATTTT+AGG | - | chr5_3:12198108-12198127 | None:intergenic | 20.0% |
| ! | TGTTGTAATTAACTTAACTG+TGG | - | chr5_3:12196927-12196946 | None:intergenic | 25.0% |
| !!! | TCAATAAGCTTTGATTTTTC+AGG | - | chr5_3:12197131-12197150 | None:intergenic | 25.0% |
| !!! | TATTATTTTGTTGCTATCAG+AGG | + | chr5_3:12197499-12197518 | Msa0799110:intron | 25.0% |
| ! | TTAGAGGAAATATAAGTGTA+AGG | - | chr5_3:12197639-12197658 | None:intergenic | 25.0% |
| !!! | TATTTTAGGAGTTTATGTCA+CGG | + | chr5_3:12197844-12197863 | Msa0799110:intron | 25.0% |
| !! | TAACCAATACTACATTGTTT+TGG | - | chr5_3:12198375-12198394 | None:intergenic | 25.0% |
| ! | AATCATTACAAAGCAAAATG+TGG | - | chr5_3:12198460-12198479 | None:intergenic | 25.0% |
| ! | TGTTGTAATTAACTTAACTG+TGG | - | chr5_3:12196927-12196946 | None:intergenic | 25.0% |
| !!! | TCAATAAGCTTTGATTTTTC+AGG | - | chr5_3:12197131-12197150 | None:intergenic | 25.0% |
| !!! | TATTATTTTGTTGCTATCAG+AGG | + | chr5_3:12197499-12197518 | Msa0799110:intron | 25.0% |
| ! | TTAGAGGAAATATAAGTGTA+AGG | - | chr5_3:12197639-12197658 | None:intergenic | 25.0% |
| !!! | TATTTTAGGAGTTTATGTCA+CGG | + | chr5_3:12197844-12197863 | Msa0799110:intron | 25.0% |
| !! | TAACCAATACTACATTGTTT+TGG | - | chr5_3:12198375-12198394 | None:intergenic | 25.0% |
| ! | AATCATTACAAAGCAAAATG+TGG | - | chr5_3:12198460-12198479 | None:intergenic | 25.0% |
| !! | TATACAATGTTTTTGACGGA+GGG | - | chr5_3:12196685-12196704 | None:intergenic | 30.0% |
| !! | TTATACAATGTTTTTGACGG+AGG | - | chr5_3:12196686-12196705 | None:intergenic | 30.0% |
| AGTTCACATGTTACAACTAA+TGG | + | chr5_3:12196768-12196787 | Msa0799110:five_prime_UTR | 30.0% | |
| ! | AAACTAATGACCATTGACTA+AGG | + | chr5_3:12196827-12196846 | Msa0799110:five_prime_UTR | 30.0% |
| ACATAAATGTCCTTAGTCAA+TGG | - | chr5_3:12196840-12196859 | None:intergenic | 30.0% | |
| TAAGGACATTTATGTCCATT+AGG | + | chr5_3:12196845-12196864 | Msa0799110:five_prime_UTR | 30.0% | |
| AAGGACATTTATGTCCATTA+GGG | + | chr5_3:12196846-12196865 | Msa0799110:five_prime_UTR | 30.0% | |
| GGATTGATTAAGCTATTTGT+AGG | - | chr5_3:12196883-12196902 | None:intergenic | 30.0% | |
| ATTGAGAGCTTCAAAAATTC+TGG | + | chr5_3:12197146-12197165 | Msa0799110:CDS | 30.0% | |
| !! | TGATCATGAAAGTCTTGTTA+AGG | + | chr5_3:12197308-12197327 | Msa0799110:CDS | 30.0% |
| GCAAAAAGCAAAAATCAGAA+GGG | + | chr5_3:12197593-12197612 | Msa0799110:CDS | 30.0% | |
| !! | CATTTTGTTGTCCTAATGTA+GGG | - | chr5_3:12197683-12197702 | None:intergenic | 30.0% |
| !! | ACATTTTGTTGTCCTAATGT+AGG | - | chr5_3:12197684-12197703 | None:intergenic | 30.0% |
| ! | ACAATTTTGTTCAAGGTTCT+TGG | - | chr5_3:12197911-12197930 | None:intergenic | 30.0% |
| CTCATTGAAAGTCAAAACAT+TGG | - | chr5_3:12197951-12197970 | None:intergenic | 30.0% | |
| !! | TTTGAGATTGAACCTTCTTT+TGG | + | chr5_3:12198245-12198264 | Msa0799110:CDS | 30.0% |
| ! | TTTGGTGAAGATGTTTGTTT+TGG | - | chr5_3:12198346-12198365 | None:intergenic | 30.0% |
| !!! | ACATTGTTTTGGCTTTAGTT+TGG | - | chr5_3:12198364-12198383 | None:intergenic | 30.0% |
| AAGCCAAAACAATGTAGTAT+TGG | + | chr5_3:12198369-12198388 | Msa0799110:three_prime_UTR | 30.0% | |
| ATTACAAAGCAAAATGTGGA+AGG | - | chr5_3:12198456-12198475 | None:intergenic | 30.0% | |
| !! | TATACAATGTTTTTGACGGA+GGG | - | chr5_3:12196685-12196704 | None:intergenic | 30.0% |
| !! | TTATACAATGTTTTTGACGG+AGG | - | chr5_3:12196686-12196705 | None:intergenic | 30.0% |
| AGTTCACATGTTACAACTAA+TGG | + | chr5_3:12196768-12196787 | Msa0799110:five_prime_UTR | 30.0% | |
| ! | AAACTAATGACCATTGACTA+AGG | + | chr5_3:12196827-12196846 | Msa0799110:five_prime_UTR | 30.0% |
| ACATAAATGTCCTTAGTCAA+TGG | - | chr5_3:12196840-12196859 | None:intergenic | 30.0% | |
| TAAGGACATTTATGTCCATT+AGG | + | chr5_3:12196845-12196864 | Msa0799110:five_prime_UTR | 30.0% | |
| AAGGACATTTATGTCCATTA+GGG | + | chr5_3:12196846-12196865 | Msa0799110:five_prime_UTR | 30.0% | |
| GGATTGATTAAGCTATTTGT+AGG | - | chr5_3:12196883-12196902 | None:intergenic | 30.0% | |
| ATTGAGAGCTTCAAAAATTC+TGG | + | chr5_3:12197146-12197165 | Msa0799110:CDS | 30.0% | |
| !! | TGATCATGAAAGTCTTGTTA+AGG | + | chr5_3:12197308-12197327 | Msa0799110:CDS | 30.0% |
| GCAAAAAGCAAAAATCAGAA+GGG | + | chr5_3:12197593-12197612 | Msa0799110:CDS | 30.0% | |
| !! | CATTTTGTTGTCCTAATGTA+GGG | - | chr5_3:12197683-12197702 | None:intergenic | 30.0% |
| !! | ACATTTTGTTGTCCTAATGT+AGG | - | chr5_3:12197684-12197703 | None:intergenic | 30.0% |
| ! | ACAATTTTGTTCAAGGTTCT+TGG | - | chr5_3:12197911-12197930 | None:intergenic | 30.0% |
| CTCATTGAAAGTCAAAACAT+TGG | - | chr5_3:12197951-12197970 | None:intergenic | 30.0% | |
| !! | TTTGAGATTGAACCTTCTTT+TGG | + | chr5_3:12198245-12198264 | Msa0799110:CDS | 30.0% |
| ! | TTTGGTGAAGATGTTTGTTT+TGG | - | chr5_3:12198346-12198365 | None:intergenic | 30.0% |
| !!! | ACATTGTTTTGGCTTTAGTT+TGG | - | chr5_3:12198364-12198383 | None:intergenic | 30.0% |
| AAGCCAAAACAATGTAGTAT+TGG | + | chr5_3:12198369-12198388 | Msa0799110:three_prime_UTR | 30.0% | |
| ATTACAAAGCAAAATGTGGA+AGG | - | chr5_3:12198456-12198475 | None:intergenic | 30.0% | |
| !! | ATACAATGTTTTTGACGGAG+GGG | - | chr5_3:12196684-12196703 | None:intergenic | 35.0% |
| TGTGAACTACTTGAAGTTGT+TGG | - | chr5_3:12196756-12196775 | None:intergenic | 35.0% | |
| CATTTATGTCCATTAGGGAA+TGG | + | chr5_3:12196851-12196870 | Msa0799110:five_prime_UTR | 35.0% | |
| !! | GATGTTGTTATTTCTACCCT+TGG | + | chr5_3:12197345-12197364 | Msa0799110:CDS | 35.0% |
| GGAAACATCAAGGTACAAAT+TGG | + | chr5_3:12197420-12197439 | Msa0799110:intron | 35.0% | |
| GGCAAAAAGCAAAAATCAGA+AGG | + | chr5_3:12197592-12197611 | Msa0799110:CDS | 35.0% | |
| GGCTTATACAATTAAAGCAG+TGG | + | chr5_3:12197880-12197899 | Msa0799110:CDS | 35.0% | |
| TTGAAAGTCAAAACATTGGC+AGG | - | chr5_3:12197947-12197966 | None:intergenic | 35.0% | |
| CGAGAAAATTTATGTTCCAG+AGG | + | chr5_3:12198009-12198028 | Msa0799110:CDS | 35.0% | |
| !! | CAACTTCTTAAGAGCATTCA+AGG | + | chr5_3:12198034-12198053 | Msa0799110:CDS | 35.0% |
| AACATTAAGTTTGCAGGGAA+AGG | - | chr5_3:12198182-12198201 | None:intergenic | 35.0% | |
| TTTCCCTGCAAACTTAATGT+TGG | + | chr5_3:12198181-12198200 | Msa0799110:CDS | 35.0% | |
| ATGCCAACATTAAGTTTGCA+GGG | - | chr5_3:12198187-12198206 | None:intergenic | 35.0% | |
| AATGCCAACATTAAGTTTGC+AGG | - | chr5_3:12198188-12198207 | None:intergenic | 35.0% | |
| GCAAACTTAATGTTGGCATT+AGG | + | chr5_3:12198188-12198207 | Msa0799110:CDS | 35.0% | |
| ! | ACAATCTCCTTTTACTGACA+TGG | - | chr5_3:12198219-12198238 | None:intergenic | 35.0% |
| !! | ATACAATGTTTTTGACGGAG+GGG | - | chr5_3:12196684-12196703 | None:intergenic | 35.0% |
| TGTGAACTACTTGAAGTTGT+TGG | - | chr5_3:12196756-12196775 | None:intergenic | 35.0% | |
| CATTTATGTCCATTAGGGAA+TGG | + | chr5_3:12196851-12196870 | Msa0799110:five_prime_UTR | 35.0% | |
| !! | GATGTTGTTATTTCTACCCT+TGG | + | chr5_3:12197345-12197364 | Msa0799110:CDS | 35.0% |
| GGAAACATCAAGGTACAAAT+TGG | + | chr5_3:12197420-12197439 | Msa0799110:intron | 35.0% | |
| GGCAAAAAGCAAAAATCAGA+AGG | + | chr5_3:12197592-12197611 | Msa0799110:CDS | 35.0% | |
| GGCTTATACAATTAAAGCAG+TGG | + | chr5_3:12197880-12197899 | Msa0799110:CDS | 35.0% | |
| TTGAAAGTCAAAACATTGGC+AGG | - | chr5_3:12197947-12197966 | None:intergenic | 35.0% | |
| CGAGAAAATTTATGTTCCAG+AGG | + | chr5_3:12198009-12198028 | Msa0799110:CDS | 35.0% | |
| !! | CAACTTCTTAAGAGCATTCA+AGG | + | chr5_3:12198034-12198053 | Msa0799110:CDS | 35.0% |
| AACATTAAGTTTGCAGGGAA+AGG | - | chr5_3:12198182-12198201 | None:intergenic | 35.0% | |
| TTTCCCTGCAAACTTAATGT+TGG | + | chr5_3:12198181-12198200 | Msa0799110:CDS | 35.0% | |
| ATGCCAACATTAAGTTTGCA+GGG | - | chr5_3:12198187-12198206 | None:intergenic | 35.0% | |
| AATGCCAACATTAAGTTTGC+AGG | - | chr5_3:12198188-12198207 | None:intergenic | 35.0% | |
| GCAAACTTAATGTTGGCATT+AGG | + | chr5_3:12198188-12198207 | Msa0799110:CDS | 35.0% | |
| ! | ACAATCTCCTTTTACTGACA+TGG | - | chr5_3:12198219-12198238 | None:intergenic | 35.0% |
| AAGAGCAAAATCCTAGTCCT+AGG | + | chr5_3:12197011-12197030 | Msa0799110:CDS | 40.0% | |
| ATTGAAGCAAGTGCAAAAGC+AGG | + | chr5_3:12197062-12197081 | Msa0799110:CDS | 40.0% | |
| ACCCTACGTTTGCTTTGATT+AGG | + | chr5_3:12197087-12197106 | Msa0799110:CDS | 40.0% | |
| CCCTAATCAAAGCAAACGTA+GGG | - | chr5_3:12197091-12197110 | None:intergenic | 40.0% | |
| CCCTACGTTTGCTTTGATTA+GGG | + | chr5_3:12197088-12197107 | Msa0799110:CDS | 40.0% | |
| TCCCTAATCAAAGCAAACGT+AGG | - | chr5_3:12197092-12197111 | None:intergenic | 40.0% | |
| !! | GTTGTTATTTCTACCCTTGG+TGG | + | chr5_3:12197348-12197367 | Msa0799110:CDS | 40.0% |
| GAAGCTCATAGCAGCAATAA+AGG | + | chr5_3:12197392-12197411 | Msa0799110:CDS | 40.0% | |
| ATAGCAGCAATAAAGGAAGC+AGG | + | chr5_3:12197399-12197418 | Msa0799110:CDS | 40.0% | |
| AAAGGAAGCAGGAAACATCA+AGG | + | chr5_3:12197410-12197429 | Msa0799110:CDS | 40.0% | |
| AGGTTTCTCCCATCTGAATT+CGG | + | chr5_3:12197519-12197538 | Msa0799110:CDS | 40.0% | |
| !! | TAATGTAGGGAGGAAGTATC+CGG | - | chr5_3:12197670-12197689 | None:intergenic | 40.0% |
| ! | TTTGTTGTCCTAATGTAGGG+AGG | - | chr5_3:12197680-12197699 | None:intergenic | 40.0% |
| AGAATAACCACTTTATCGCG+GGG | - | chr5_3:12197717-12197736 | None:intergenic | 40.0% | |
| GAGAATAACCACTTTATCGC+GGG | - | chr5_3:12197718-12197737 | None:intergenic | 40.0% | |
| CGAGAATAACCACTTTATCG+CGG | - | chr5_3:12197719-12197738 | None:intergenic | 40.0% | |
| CGCGATAAAGTGGTTATTCT+CGG | + | chr5_3:12197717-12197736 | Msa0799110:CDS | 40.0% | |
| AAAGTGGTTATTCTCGGAGA+TGG | + | chr5_3:12197723-12197742 | Msa0799110:CDS | 40.0% | |
| TTTAGGAGTTTATGTCACGG+AGG | + | chr5_3:12197847-12197866 | Msa0799110:intron | 40.0% | |
| AAAGTCAAAACATTGGCAGG+AGG | - | chr5_3:12197944-12197963 | None:intergenic | 40.0% | |
| ! | CTCTTAAGAAGTTGATCCTC+TGG | - | chr5_3:12198028-12198047 | None:intergenic | 40.0% |
| ! | GATTGAACCTTCTTTTGGTG+TGG | + | chr5_3:12198250-12198269 | Msa0799110:CDS | 40.0% |
| !! | AGCTTCTGAAATCTATCCTG+AGG | + | chr5_3:12198274-12198293 | Msa0799110:CDS | 40.0% |
| TCCTGAGGTGAAATACACTA+CGG | + | chr5_3:12198289-12198308 | Msa0799110:CDS | 40.0% | |
| CTTTCACTCAGTAGTGTACA+TGG | - | chr5_3:12198489-12198508 | None:intergenic | 40.0% | |
| AAGAGCAAAATCCTAGTCCT+AGG | + | chr5_3:12197011-12197030 | Msa0799110:CDS | 40.0% | |
| ATTGAAGCAAGTGCAAAAGC+AGG | + | chr5_3:12197062-12197081 | Msa0799110:CDS | 40.0% | |
| ACCCTACGTTTGCTTTGATT+AGG | + | chr5_3:12197087-12197106 | Msa0799110:CDS | 40.0% | |
| CCCTAATCAAAGCAAACGTA+GGG | - | chr5_3:12197091-12197110 | None:intergenic | 40.0% | |
| CCCTACGTTTGCTTTGATTA+GGG | + | chr5_3:12197088-12197107 | Msa0799110:CDS | 40.0% | |
| TCCCTAATCAAAGCAAACGT+AGG | - | chr5_3:12197092-12197111 | None:intergenic | 40.0% | |
| !! | GTTGTTATTTCTACCCTTGG+TGG | + | chr5_3:12197348-12197367 | Msa0799110:CDS | 40.0% |
| GAAGCTCATAGCAGCAATAA+AGG | + | chr5_3:12197392-12197411 | Msa0799110:CDS | 40.0% | |
| ATAGCAGCAATAAAGGAAGC+AGG | + | chr5_3:12197399-12197418 | Msa0799110:CDS | 40.0% | |
| AAAGGAAGCAGGAAACATCA+AGG | + | chr5_3:12197410-12197429 | Msa0799110:CDS | 40.0% | |
| AGGTTTCTCCCATCTGAATT+CGG | + | chr5_3:12197519-12197538 | Msa0799110:CDS | 40.0% | |
| !! | TAATGTAGGGAGGAAGTATC+CGG | - | chr5_3:12197670-12197689 | None:intergenic | 40.0% |
| ! | TTTGTTGTCCTAATGTAGGG+AGG | - | chr5_3:12197680-12197699 | None:intergenic | 40.0% |
| AGAATAACCACTTTATCGCG+GGG | - | chr5_3:12197717-12197736 | None:intergenic | 40.0% | |
| GAGAATAACCACTTTATCGC+GGG | - | chr5_3:12197718-12197737 | None:intergenic | 40.0% | |
| CGAGAATAACCACTTTATCG+CGG | - | chr5_3:12197719-12197738 | None:intergenic | 40.0% | |
| CGCGATAAAGTGGTTATTCT+CGG | + | chr5_3:12197717-12197736 | Msa0799110:CDS | 40.0% | |
| AAAGTGGTTATTCTCGGAGA+TGG | + | chr5_3:12197723-12197742 | Msa0799110:CDS | 40.0% | |
| TTTAGGAGTTTATGTCACGG+AGG | + | chr5_3:12197847-12197866 | Msa0799110:intron | 40.0% | |
| AAAGTCAAAACATTGGCAGG+AGG | - | chr5_3:12197944-12197963 | None:intergenic | 40.0% | |
| ! | CTCTTAAGAAGTTGATCCTC+TGG | - | chr5_3:12198028-12198047 | None:intergenic | 40.0% |
| ! | GATTGAACCTTCTTTTGGTG+TGG | + | chr5_3:12198250-12198269 | Msa0799110:CDS | 40.0% |
| !! | AGCTTCTGAAATCTATCCTG+AGG | + | chr5_3:12198274-12198293 | Msa0799110:CDS | 40.0% |
| TCCTGAGGTGAAATACACTA+CGG | + | chr5_3:12198289-12198308 | Msa0799110:CDS | 40.0% | |
| CTTTCACTCAGTAGTGTACA+TGG | - | chr5_3:12198489-12198508 | None:intergenic | 40.0% | |
| CTGTGACTGTGCAGATCAAA+GGG | - | chr5_3:12196904-12196923 | None:intergenic | 45.0% | |
| AGCAAAATCCTAGTCCTAGG+AGG | + | chr5_3:12197014-12197033 | Msa0799110:CDS | 45.0% | |
| CTATGTAACCTGTTCCTCCT+AGG | - | chr5_3:12197031-12197050 | None:intergenic | 45.0% | |
| CTAGGAGGAACAGGTTACAT+AGG | + | chr5_3:12197029-12197048 | Msa0799110:CDS | 45.0% | |
| ATCTACTTGTGCTCCACCAA+GGG | - | chr5_3:12197364-12197383 | None:intergenic | 45.0% | |
| TTGCTGCTATGAGCTTCACT+TGG | - | chr5_3:12197389-12197408 | None:intergenic | 45.0% | |
| GGTTTCTCCCATCTGAATTC+GGG | + | chr5_3:12197520-12197539 | Msa0799110:CDS | 45.0% | |
| !!! | AGCCGGTAGCTAGCTTTTTT+GGG | + | chr5_3:12197571-12197590 | Msa0799110:CDS | 45.0% |
| TGCCCAAAAAAGCTAGCTAC+CGG | - | chr5_3:12197576-12197595 | None:intergenic | 45.0% | |
| AGAAGGGCAATTGAAGCTGA+AGG | + | chr5_3:12197609-12197628 | Msa0799110:CDS | 45.0% | |
| ATTTCCTCTAACGCCTTTGC+CGG | + | chr5_3:12197648-12197667 | Msa0799110:CDS | 45.0% | |
| GGATACTTCCTCCCTACATT+AGG | + | chr5_3:12197669-12197688 | Msa0799110:CDS | 45.0% | |
| CTCGGAGATGGAAATGTCAA+AGG | + | chr5_3:12197735-12197754 | Msa0799110:CDS | 45.0% | |
| TATGTCACGGAGGAAGACAT+TGG | + | chr5_3:12197857-12197876 | Msa0799110:CDS | 45.0% | |
| ATGTCACGGAGGAAGACATT+GGG | + | chr5_3:12197858-12197877 | Msa0799110:CDS | 45.0% | |
| TCAATGAGCTCGTCTCATTG+TGG | + | chr5_3:12197963-12197982 | Msa0799110:CDS | 45.0% | |
| CAATGAGCTCGTCTCATTGT+GGG | + | chr5_3:12197964-12197983 | Msa0799110:CDS | 45.0% | |
| GGTCACTCCATGTCAGTAAA+AGG | + | chr5_3:12198209-12198228 | Msa0799110:CDS | 45.0% | |
| GAAGCTTCCACACCAAAAGA+AGG | - | chr5_3:12198260-12198279 | None:intergenic | 45.0% | |
| ACCGTAGTGTATTTCACCTC+AGG | - | chr5_3:12198293-12198312 | None:intergenic | 45.0% | |
| CTGTGACTGTGCAGATCAAA+GGG | - | chr5_3:12196904-12196923 | None:intergenic | 45.0% | |
| AGCAAAATCCTAGTCCTAGG+AGG | + | chr5_3:12197014-12197033 | Msa0799110:CDS | 45.0% | |
| CTATGTAACCTGTTCCTCCT+AGG | - | chr5_3:12197031-12197050 | None:intergenic | 45.0% | |
| CTAGGAGGAACAGGTTACAT+AGG | + | chr5_3:12197029-12197048 | Msa0799110:CDS | 45.0% | |
| ATCTACTTGTGCTCCACCAA+GGG | - | chr5_3:12197364-12197383 | None:intergenic | 45.0% | |
| TTGCTGCTATGAGCTTCACT+TGG | - | chr5_3:12197389-12197408 | None:intergenic | 45.0% | |
| GGTTTCTCCCATCTGAATTC+GGG | + | chr5_3:12197520-12197539 | Msa0799110:CDS | 45.0% | |
| !!! | AGCCGGTAGCTAGCTTTTTT+GGG | + | chr5_3:12197571-12197590 | Msa0799110:CDS | 45.0% |
| TGCCCAAAAAAGCTAGCTAC+CGG | - | chr5_3:12197576-12197595 | None:intergenic | 45.0% | |
| AGAAGGGCAATTGAAGCTGA+AGG | + | chr5_3:12197609-12197628 | Msa0799110:CDS | 45.0% | |
| ATTTCCTCTAACGCCTTTGC+CGG | + | chr5_3:12197648-12197667 | Msa0799110:CDS | 45.0% | |
| GGATACTTCCTCCCTACATT+AGG | + | chr5_3:12197669-12197688 | Msa0799110:CDS | 45.0% | |
| CTCGGAGATGGAAATGTCAA+AGG | + | chr5_3:12197735-12197754 | Msa0799110:CDS | 45.0% | |
| TATGTCACGGAGGAAGACAT+TGG | + | chr5_3:12197857-12197876 | Msa0799110:CDS | 45.0% | |
| ATGTCACGGAGGAAGACATT+GGG | + | chr5_3:12197858-12197877 | Msa0799110:CDS | 45.0% | |
| TCAATGAGCTCGTCTCATTG+TGG | + | chr5_3:12197963-12197982 | Msa0799110:CDS | 45.0% | |
| CAATGAGCTCGTCTCATTGT+GGG | + | chr5_3:12197964-12197983 | Msa0799110:CDS | 45.0% | |
| GGTCACTCCATGTCAGTAAA+AGG | + | chr5_3:12198209-12198228 | Msa0799110:CDS | 45.0% | |
| GAAGCTTCCACACCAAAAGA+AGG | - | chr5_3:12198260-12198279 | None:intergenic | 45.0% | |
| ACCGTAGTGTATTTCACCTC+AGG | - | chr5_3:12198293-12198312 | None:intergenic | 45.0% | |
| AGGACAGCACCATTCCCTAA+TGG | - | chr5_3:12196863-12196882 | None:intergenic | 50.0% | |
| GCTGTGACTGTGCAGATCAA+AGG | - | chr5_3:12196905-12196924 | None:intergenic | 50.0% | |
| ATCCTAGTCCTAGGAGGAAC+AGG | + | chr5_3:12197020-12197039 | Msa0799110:CDS | 50.0% | |
| AACCTGTTCCTCCTAGGACT+AGG | - | chr5_3:12197025-12197044 | None:intergenic | 50.0% | |
| CATCTACTTGTGCTCCACCA+AGG | - | chr5_3:12197365-12197384 | None:intergenic | 50.0% | |
| CGTCGATCCCGAATTCAGAT+GGG | - | chr5_3:12197530-12197549 | None:intergenic | 50.0% | |
| ACGTCGATCCCGAATTCAGA+TGG | - | chr5_3:12197531-12197550 | None:intergenic | 50.0% | |
| !!! | GAGCCGGTAGCTAGCTTTTT+TGG | + | chr5_3:12197570-12197589 | Msa0799110:CDS | 50.0% |
| ATAACCACTTTATCGCGGGG+AGG | - | chr5_3:12197714-12197733 | None:intergenic | 50.0% | |
| TGTCACGGAGGAAGACATTG+GGG | + | chr5_3:12197859-12197878 | Msa0799110:CDS | 50.0% | |
| AGGACAGCACCATTCCCTAA+TGG | - | chr5_3:12196863-12196882 | None:intergenic | 50.0% | |
| GCTGTGACTGTGCAGATCAA+AGG | - | chr5_3:12196905-12196924 | None:intergenic | 50.0% | |
| ATCCTAGTCCTAGGAGGAAC+AGG | + | chr5_3:12197020-12197039 | Msa0799110:CDS | 50.0% | |
| AACCTGTTCCTCCTAGGACT+AGG | - | chr5_3:12197025-12197044 | None:intergenic | 50.0% | |
| CATCTACTTGTGCTCCACCA+AGG | - | chr5_3:12197365-12197384 | None:intergenic | 50.0% | |
| CGTCGATCCCGAATTCAGAT+GGG | - | chr5_3:12197530-12197549 | None:intergenic | 50.0% | |
| ACGTCGATCCCGAATTCAGA+TGG | - | chr5_3:12197531-12197550 | None:intergenic | 50.0% | |
| !!! | GAGCCGGTAGCTAGCTTTTT+TGG | + | chr5_3:12197570-12197589 | Msa0799110:CDS | 50.0% |
| ATAACCACTTTATCGCGGGG+AGG | - | chr5_3:12197714-12197733 | None:intergenic | 50.0% | |
| TGTCACGGAGGAAGACATTG+GGG | + | chr5_3:12197859-12197878 | Msa0799110:CDS | 50.0% | |
| ! | GTTTTTGACGGAGGGGTCAC+TGG | - | chr5_3:12196677-12196696 | None:intergenic | 55.0% |
| !! | TAGCTACCGGCTCAACAGCA+TGG | - | chr5_3:12197563-12197582 | None:intergenic | 55.0% |
| !! | GTATCCGGCAAAGGCGTTAG+AGG | - | chr5_3:12197655-12197674 | None:intergenic | 55.0% |
| !! | AGGGAGGAAGTATCCGGCAA+AGG | - | chr5_3:12197664-12197683 | None:intergenic | 55.0% |
| ATCTCCTCCCCGCGATAAAG+TGG | + | chr5_3:12197707-12197726 | Msa0799110:CDS | 55.0% | |
| ! | GTTTTTGACGGAGGGGTCAC+TGG | - | chr5_3:12196677-12196696 | None:intergenic | 55.0% |
| !! | TAGCTACCGGCTCAACAGCA+TGG | - | chr5_3:12197563-12197582 | None:intergenic | 55.0% |
| !! | GTATCCGGCAAAGGCGTTAG+AGG | - | chr5_3:12197655-12197674 | None:intergenic | 55.0% |
| !! | AGGGAGGAAGTATCCGGCAA+AGG | - | chr5_3:12197664-12197683 | None:intergenic | 55.0% |
| ATCTCCTCCCCGCGATAAAG+TGG | + | chr5_3:12197707-12197726 | Msa0799110:CDS | 55.0% | |
| CCGGCTCAACAGCATGGTGA+CGG | - | chr5_3:12197557-12197576 | None:intergenic | 60.0% | |
| CCGTCACCATGCTGTTGAGC+CGG | + | chr5_3:12197554-12197573 | Msa0799110:CDS | 60.0% | |
| CCGGCTCAACAGCATGGTGA+CGG | - | chr5_3:12197557-12197576 | None:intergenic | 60.0% | |
| CCGTCACCATGCTGTTGAGC+CGG | + | chr5_3:12197554-12197573 | Msa0799110:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12196668 | 12198532 | 12196668 | ID=Msa0799110;Name=Msa0799110 |
| chr5_3 | mRNA | 12196668 | 12198532 | 12196668 | ID=Msa0799110-mRNA-1;Parent=Msa0799110;Name=Msa0799110-mRNA-1;_AED=0.12;_eAED=0.12;_QI=334|1|1|1|0.8|0.66|6|168|308 |
| chr5_3 | exon | 12196668 | 12197184 | 12196668 | ID=Msa0799110-mRNA-1:exon:5010;Parent=Msa0799110-mRNA-1 |
| chr5_3 | exon | 12197297 | 12197431 | 12197297 | ID=Msa0799110-mRNA-1:exon:5011;Parent=Msa0799110-mRNA-1 |
| chr5_3 | exon | 12197519 | 12197756 | 12197519 | ID=Msa0799110-mRNA-1:exon:5012;Parent=Msa0799110-mRNA-1 |
| chr5_3 | exon | 12197852 | 12198055 | 12197852 | ID=Msa0799110-mRNA-1:exon:5013;Parent=Msa0799110-mRNA-1 |
| chr5_3 | exon | 12198174 | 12198425 | 12198174 | ID=Msa0799110-mRNA-1:exon:5014;Parent=Msa0799110-mRNA-1 |
| chr5_3 | exon | 12198450 | 12198532 | 12198450 | ID=Msa0799110-mRNA-1:exon:5015;Parent=Msa0799110-mRNA-1 |
| chr5_3 | five_prime_UTR | 12196668 | 12197001 | 12196668 | ID=Msa0799110-mRNA-1:five_prime_utr;Parent=Msa0799110-mRNA-1 |
| chr5_3 | CDS | 12197002 | 12197184 | 12197002 | ID=Msa0799110-mRNA-1:cds;Parent=Msa0799110-mRNA-1 |
| chr5_3 | CDS | 12197297 | 12197431 | 12197297 | ID=Msa0799110-mRNA-1:cds;Parent=Msa0799110-mRNA-1 |
| chr5_3 | CDS | 12197519 | 12197756 | 12197519 | ID=Msa0799110-mRNA-1:cds;Parent=Msa0799110-mRNA-1 |
| chr5_3 | CDS | 12197852 | 12198055 | 12197852 | ID=Msa0799110-mRNA-1:cds;Parent=Msa0799110-mRNA-1 |
| chr5_3 | CDS | 12198174 | 12198340 | 12198174 | ID=Msa0799110-mRNA-1:cds;Parent=Msa0799110-mRNA-1 |
| chr5_3 | three_prime_UTR | 12198341 | 12198425 | 12198341 | ID=Msa0799110-mRNA-1:three_prime_utr;Parent=Msa0799110-mRNA-1 |
| chr5_3 | three_prime_UTR | 12198450 | 12198532 | 12198450 | ID=Msa0799110-mRNA-1:three_prime_utr;Parent=Msa0799110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
