Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014280 | XP_013466877.1 | 94.488 | 254 | 14 | 0 | 1 | 254 | 1 | 254 | 6.52e-166 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014280 | sp|Q9FMY4|Y5316_ARATH | 27.972 | 286 | 135 | 11 | 9 | 252 | 14 | 270 | 9.39e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014280 | A0A072VHN8 | 94.488 | 254 | 14 | 0 | 1 | 254 | 1 | 254 | 3.11e-166 | 469 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0014280 | 0.814084 | 1.844201e-51 | -8.615850e-47 |
| Msa0014280 | Msa0030800 | 0.846122 | 2.647833e-59 | -8.615850e-47 |
| Msa0014280 | Msa0031410 | 0.801378 | 9.262679e-49 | -8.615850e-47 |
| Msa0014280 | Msa0034540 | 0.803791 | 2.945120e-49 | -8.615850e-47 |
| Msa0014280 | Msa0034590 | -0.805157 | 1.528749e-49 | -8.615850e-47 |
| Msa0014280 | Msa0048380 | 0.817383 | 3.393581e-52 | -8.615850e-47 |
| Msa0014280 | Msa0051480 | 0.821291 | 4.365220e-53 | -8.615850e-47 |
| Msa0014280 | Msa0070120 | 0.800462 | 1.425009e-48 | -8.615850e-47 |
| Msa0014280 | Msa0071470 | 0.803956 | 2.721629e-49 | -8.615850e-47 |
| Msa0014280 | Msa0078210 | 0.850758 | 1.380199e-60 | -8.615850e-47 |
| Msa0014280 | Msa0080100 | -0.813916 | 2.008412e-51 | -8.615850e-47 |
| Msa0014280 | Msa0098380 | 0.804588 | 2.009762e-49 | -8.615850e-47 |
| Msa0014280 | Msa0107830 | 0.885696 | 6.508440e-72 | -8.615850e-47 |
| Msa0014280 | Msa0117650 | 0.819486 | 1.132688e-52 | -8.615850e-47 |
| Msa0014280 | Msa0126430 | 0.822091 | 2.850950e-53 | -8.615850e-47 |
| Msa0014280 | Msa0129290 | 0.857292 | 1.802239e-62 | -8.615850e-47 |
| Msa0014280 | Msa0129770 | 0.831355 | 1.749330e-55 | -8.615850e-47 |
| Msa0014280 | Msa0143640 | 0.835547 | 1.574621e-56 | -8.615850e-47 |
| Msa0014280 | Msa0143830 | 0.825211 | 5.304052e-54 | -8.615850e-47 |
| Msa0014280 | Msa0146200 | 0.818251 | 2.160424e-52 | -8.615850e-47 |
| Msa0014280 | Msa0150640 | 0.831607 | 1.516628e-55 | -8.615850e-47 |
| Msa0014280 | Msa0161230 | 0.813446 | 2.549872e-51 | -8.615850e-47 |
| Msa0014280 | Msa0164310 | -0.800843 | 1.191705e-48 | -8.615850e-47 |
| Msa0014280 | Msa0164350 | 0.847290 | 1.270029e-59 | -8.615850e-47 |
| Msa0014280 | Msa0175240 | -0.808313 | 3.293946e-50 | -8.615850e-47 |
| Msa0014280 | Msa0185040 | 0.831515 | 1.597837e-55 | -8.615850e-47 |
| Msa0014280 | Msa0185100 | 0.838473 | 2.817154e-57 | -8.615850e-47 |
| Msa0014280 | Msa0186240 | 0.841496 | 4.588640e-58 | -8.615850e-47 |
| Msa0014280 | Msa0193190 | 0.800969 | 1.122916e-48 | -8.615850e-47 |
| Msa0014280 | Msa0193950 | 0.809245 | 2.081352e-50 | -8.615850e-47 |
| Msa0014280 | Msa0200090 | 0.804678 | 1.924881e-49 | -8.615850e-47 |
| Msa0014280 | Msa0203090 | 0.811346 | 7.328727e-51 | -8.615850e-47 |
| Msa0014280 | Msa0204170 | 0.810138 | 1.337677e-50 | -8.615850e-47 |
| Msa0014280 | Msa0235820 | 0.805337 | 1.401293e-49 | -8.615850e-47 |
| Msa0014280 | Msa0238330 | 0.800155 | 1.645450e-48 | -8.615850e-47 |
| Msa0014280 | Msa0242720 | 0.827114 | 1.870134e-54 | -8.615850e-47 |
| Msa0014280 | Msa0246140 | 0.827562 | 1.460844e-54 | -8.615850e-47 |
| Msa0014280 | Msa0257760 | 0.822212 | 2.673408e-53 | -8.615850e-47 |
| Msa0014280 | Msa0261020 | -0.802036 | 6.788251e-49 | -8.615850e-47 |
| Msa0014280 | Msa0265650 | 0.813897 | 2.028506e-51 | -8.615850e-47 |
| Msa0014280 | Msa0267700 | 0.817520 | 3.160843e-52 | -8.615850e-47 |
| Msa0014280 | Msa0267900 | 0.838382 | 2.972636e-57 | -8.615850e-47 |
| Msa0014280 | Msa0271700 | 0.848103 | 7.583280e-60 | -8.615850e-47 |
| Msa0014280 | Msa0271720 | 0.850427 | 1.709618e-60 | -8.615850e-47 |
| Msa0014280 | Msa0273070 | 0.820538 | 6.505844e-53 | -8.615850e-47 |
| Msa0014280 | Msa0275730 | 0.845091 | 5.041005e-59 | -8.615850e-47 |
| Msa0014280 | Msa0284730 | 0.820417 | 6.935822e-53 | -8.615850e-47 |
| Msa0014280 | Msa0306310 | 0.801071 | 1.070294e-48 | -8.615850e-47 |
| Msa0014280 | Msa0310190 | 0.864904 | 8.693494e-65 | -8.615850e-47 |
| Msa0014280 | Msa0312300 | 0.809020 | 2.326240e-50 | -8.615850e-47 |
| Msa0014280 | Msa0319680 | 0.809116 | 2.218209e-50 | -8.615850e-47 |
| Msa0014280 | Msa0320130 | 0.826897 | 2.107775e-54 | -8.615850e-47 |
| Msa0014280 | Msa0320140 | 0.830544 | 2.767037e-55 | -8.615850e-47 |
| Msa0014280 | Msa0320170 | 0.836807 | 7.537083e-57 | -8.615850e-47 |
| Msa0014280 | Msa0324810 | 0.837303 | 5.628925e-57 | -8.615850e-47 |
| Msa0014280 | Msa0324840 | 0.822274 | 2.586371e-53 | -8.615850e-47 |
| Msa0014280 | Msa0335050 | 0.801195 | 1.009774e-48 | -8.615850e-47 |
| Msa0014280 | Msa0340370 | 0.825348 | 4.923912e-54 | -8.615850e-47 |
| Msa0014280 | Msa0345890 | 0.840230 | 9.853935e-58 | -8.615850e-47 |
| Msa0014280 | Msa0346170 | 0.820718 | 5.914829e-53 | -8.615850e-47 |
| Msa0014280 | Msa0347320 | 0.817460 | 3.260328e-52 | -8.615850e-47 |
| Msa0014280 | Msa0350180 | 0.837848 | 4.080430e-57 | -8.615850e-47 |
| Msa0014280 | Msa0353010 | 0.803504 | 3.377103e-49 | -8.615850e-47 |
| Msa0014280 | Msa0378320 | 0.810064 | 1.388091e-50 | -8.615850e-47 |
| Msa0014280 | Msa0383900 | 0.823798 | 1.140568e-53 | -8.615850e-47 |
| Msa0014280 | Msa0390160 | 0.803223 | 3.863222e-49 | -8.615850e-47 |
| Msa0014280 | Msa0390200 | 0.890540 | 8.981513e-74 | -8.615850e-47 |
| Msa0014280 | Msa0393100 | 0.812613 | 3.882897e-51 | -8.615850e-47 |
| Msa0014280 | Msa0397200 | 0.807629 | 4.603341e-50 | -8.615850e-47 |
| Msa0014280 | Msa0400010 | 0.803777 | 2.964207e-49 | -8.615850e-47 |
| Msa0014280 | Msa0405200 | 0.822421 | 2.390237e-53 | -8.615850e-47 |
| Msa0014280 | Msa0405210 | 0.807384 | 5.188543e-50 | -8.615850e-47 |
| Msa0014280 | Msa0427660 | 0.806935 | 6.458510e-50 | -8.615850e-47 |
| Msa0014280 | Msa0433890 | -0.805692 | 1.180767e-49 | -8.615850e-47 |
| Msa0014280 | Msa0434300 | 0.837195 | 5.997901e-57 | -8.615850e-47 |
| Msa0014280 | Msa0434400 | 0.835306 | 1.812052e-56 | -8.615850e-47 |
| Msa0014280 | Msa0434460 | 0.803508 | 3.370944e-49 | -8.615850e-47 |
| Msa0014280 | Msa0438070 | 0.820715 | 5.925601e-53 | -8.615850e-47 |
| Msa0014280 | Msa0438520 | 0.808948 | 2.409412e-50 | -8.615850e-47 |
| Msa0014280 | Msa0441750 | 0.822936 | 1.814436e-53 | -8.615850e-47 |
| Msa0014280 | Msa0447160 | 0.814881 | 1.229358e-51 | -8.615850e-47 |
| Msa0014280 | Msa0449490 | 0.828843 | 7.177712e-55 | -8.615850e-47 |
| Msa0014280 | Msa0449500 | 0.810067 | 1.385983e-50 | -8.615850e-47 |
| Msa0014280 | Msa0459930 | 0.800996 | 1.108654e-48 | -8.615850e-47 |
| Msa0014280 | Msa0460600 | 0.844203 | 8.743258e-59 | -8.615850e-47 |
| Msa0014280 | Msa0464360 | 0.807038 | 6.143291e-50 | -8.615850e-47 |
| Msa0014280 | Msa0478080 | 0.830787 | 2.412585e-55 | -8.615850e-47 |
| Msa0014280 | Msa0480540 | 0.813369 | 2.650763e-51 | -8.615850e-47 |
| Msa0014280 | Msa0480550 | 0.823101 | 1.659992e-53 | -8.615850e-47 |
| Msa0014280 | Msa0489370 | 0.802531 | 5.368811e-49 | -8.615850e-47 |
| Msa0014280 | Msa0490100 | 0.842894 | 1.956626e-58 | -8.615850e-47 |
| Msa0014280 | Msa0492110 | 0.816058 | 6.724984e-52 | -8.615850e-47 |
| Msa0014280 | Msa0493870 | 0.822202 | 2.687249e-53 | -8.615850e-47 |
| Msa0014280 | Msa0497680 | 0.818884 | 1.552708e-52 | -8.615850e-47 |
| Msa0014280 | Msa0497690 | 0.871036 | 9.280633e-67 | -8.615850e-47 |
| Msa0014280 | Msa0497860 | 0.805250 | 1.461465e-49 | -8.615850e-47 |
| Msa0014280 | Msa0510870 | 0.814312 | 1.642320e-51 | -8.615850e-47 |
| Msa0014280 | Msa0512280 | 0.811141 | 8.119414e-51 | -8.615850e-47 |
| Msa0014280 | Msa0522140 | 0.837457 | 5.140942e-57 | -8.615850e-47 |
| Msa0014280 | Msa0522170 | 0.845828 | 3.184230e-59 | -8.615850e-47 |
| Msa0014280 | Msa0534610 | 0.812461 | 4.191121e-51 | -8.615850e-47 |
| Msa0014280 | Msa0550980 | -0.804810 | 1.806304e-49 | -8.615850e-47 |
| Msa0014280 | Msa0557240 | 0.812409 | 4.301598e-51 | -8.615850e-47 |
| Msa0014280 | Msa0561830 | 0.850139 | 2.060283e-60 | -8.615850e-47 |
| Msa0014280 | Msa0565120 | 0.843699 | 1.193183e-58 | -8.615850e-47 |
| Msa0014280 | Msa0565180 | 0.807975 | 3.887299e-50 | -8.615850e-47 |
| Msa0014280 | Msa0566530 | 0.850125 | 2.078943e-60 | -8.615850e-47 |
| Msa0014280 | Msa0568110 | 0.827811 | 1.273214e-54 | -8.615850e-47 |
| Msa0014280 | Msa0570050 | 0.812015 | 5.242652e-51 | -8.615850e-47 |
| Msa0014280 | Msa0570460 | 0.821097 | 4.838235e-53 | -8.615850e-47 |
| Msa0014280 | Msa0572700 | 0.810984 | 8.782682e-51 | -8.615850e-47 |
| Msa0014280 | Msa0574420 | 0.854325 | 1.327432e-61 | -8.615850e-47 |
| Msa0014280 | Msa0580840 | 0.830239 | 3.284099e-55 | -8.615850e-47 |
| Msa0014280 | Msa0588040 | 0.818808 | 1.615692e-52 | -8.615850e-47 |
| Msa0014280 | Msa0589000 | 0.815875 | 7.389926e-52 | -8.615850e-47 |
| Msa0014280 | Msa0589060 | 0.814210 | 1.730130e-51 | -8.615850e-47 |
| Msa0014280 | Msa0590810 | 0.825110 | 5.604876e-54 | -8.615850e-47 |
| Msa0014280 | Msa0594250 | 0.805394 | 1.363670e-49 | -8.615850e-47 |
| Msa0014280 | Msa0597170 | 0.821483 | 3.941232e-53 | -8.615850e-47 |
| Msa0014280 | Msa0597370 | -0.810479 | 1.129447e-50 | -8.615850e-47 |
| Msa0014280 | Msa0597800 | 0.814596 | 1.421797e-51 | -8.615850e-47 |
| Msa0014280 | Msa0597820 | 0.825822 | 3.800499e-54 | -8.615850e-47 |
| Msa0014280 | Msa0603300 | 0.806852 | 6.727274e-50 | -8.615850e-47 |
| Msa0014280 | Msa0606340 | -0.802360 | 5.821951e-49 | -8.615850e-47 |
| Msa0014280 | Msa0614960 | 0.849021 | 4.223040e-60 | -8.615850e-47 |
| Msa0014280 | Msa0619030 | -0.820811 | 5.629549e-53 | -8.615850e-47 |
| Msa0014280 | Msa0628200 | 0.806474 | 8.082649e-50 | -8.615850e-47 |
| Msa0014280 | Msa0629040 | 0.800852 | 1.186504e-48 | -8.615850e-47 |
| Msa0014280 | Msa0629140 | 0.804299 | 2.309301e-49 | -8.615850e-47 |
| Msa0014280 | Msa0631130 | 0.820240 | 7.614898e-53 | -8.615850e-47 |
| Msa0014280 | Msa0637590 | 0.829346 | 5.420317e-55 | -8.615850e-47 |
| Msa0014280 | Msa0637700 | 0.803460 | 3.449807e-49 | -8.615850e-47 |
| Msa0014280 | Msa0652590 | 0.854039 | 1.604837e-61 | -8.615850e-47 |
| Msa0014280 | Msa0652600 | 0.801424 | 9.064238e-49 | -8.615850e-47 |
| Msa0014280 | Msa0652610 | 0.806718 | 7.180417e-50 | -8.615850e-47 |
| Msa0014280 | Msa0655370 | 0.848148 | 7.370485e-60 | -8.615850e-47 |
| Msa0014280 | Msa0657260 | 0.815886 | 7.347730e-52 | -8.615850e-47 |
| Msa0014280 | Msa0657340 | 0.822107 | 2.827674e-53 | -8.615850e-47 |
| Msa0014280 | Msa0661330 | 0.814851 | 1.247982e-51 | -8.615850e-47 |
| Msa0014280 | Msa0666580 | 0.800299 | 1.538108e-48 | -8.615850e-47 |
| Msa0014280 | Msa0666950 | 0.819096 | 1.389871e-52 | -8.615850e-47 |
| Msa0014280 | Msa0669350 | 0.814729 | 1.328524e-51 | -8.615850e-47 |
| Msa0014280 | Msa0675590 | 0.854448 | 1.222746e-61 | -8.615850e-47 |
| Msa0014280 | Msa0675620 | 0.818431 | 1.967426e-52 | -8.615850e-47 |
| Msa0014280 | Msa0679220 | 0.800503 | 1.397925e-48 | -8.615850e-47 |
| Msa0014280 | Msa0694320 | 0.818538 | 1.860183e-52 | -8.615850e-47 |
| Msa0014280 | Msa0699170 | 0.840936 | 6.438776e-58 | -8.615850e-47 |
| Msa0014280 | Msa0701490 | 0.828467 | 8.847225e-55 | -8.615850e-47 |
| Msa0014280 | Msa0701560 | 0.827762 | 1.307686e-54 | -8.615850e-47 |
| Msa0014280 | Msa0704560 | 0.845347 | 4.299283e-59 | -8.615850e-47 |
| Msa0014280 | Msa0716620 | 0.832968 | 6.980931e-56 | -8.615850e-47 |
| Msa0014280 | Msa0717860 | 0.802745 | 4.850092e-49 | -8.615850e-47 |
| Msa0014280 | Msa0723770 | 0.811771 | 5.926787e-51 | -8.615850e-47 |
| Msa0014280 | Msa0727230 | 0.826455 | 2.686913e-54 | -8.615850e-47 |
| Msa0014280 | Msa0729740 | -0.806223 | 9.132390e-50 | -8.615850e-47 |
| Msa0014280 | Msa0731580 | 0.851589 | 8.041068e-61 | -8.615850e-47 |
| Msa0014280 | Msa0736560 | 0.802129 | 6.496498e-49 | -8.615850e-47 |
| Msa0014280 | Msa0738680 | 0.825303 | 5.044522e-54 | -8.615850e-47 |
| Msa0014280 | Msa0739820 | -0.824164 | 9.363899e-54 | -8.615850e-47 |
| Msa0014280 | Msa0744550 | 0.814901 | 1.216899e-51 | -8.615850e-47 |
| Msa0014280 | Msa0744560 | 0.820824 | 5.592225e-53 | -8.615850e-47 |
| Msa0014280 | Msa0744710 | 0.841398 | 4.869115e-58 | -8.615850e-47 |
| Msa0014280 | Msa0746340 | 0.815697 | 8.094542e-52 | -8.615850e-47 |
| Msa0014280 | Msa0750790 | 0.811667 | 6.242238e-51 | -8.615850e-47 |
| Msa0014280 | Msa0750830 | 0.843546 | 1.311281e-58 | -8.615850e-47 |
| Msa0014280 | Msa0751510 | 0.805872 | 1.082503e-49 | -8.615850e-47 |
| Msa0014280 | Msa0758520 | 0.831353 | 1.751425e-55 | -8.615850e-47 |
| Msa0014280 | Msa0758570 | 0.823605 | 1.265947e-53 | -8.615850e-47 |
| Msa0014280 | Msa0765140 | 0.821455 | 4.001820e-53 | -8.615850e-47 |
| Msa0014280 | Msa0771810 | 0.845983 | 2.888672e-59 | -8.615850e-47 |
| Msa0014280 | Msa0772350 | 0.866401 | 2.929940e-65 | -8.615850e-47 |
| Msa0014280 | Msa0792890 | 0.801994 | 6.923227e-49 | -8.615850e-47 |
| Msa0014280 | Msa0793270 | 0.830416 | 2.973001e-55 | -8.615850e-47 |
| Msa0014280 | Msa0794200 | 0.836928 | 7.019520e-57 | -8.615850e-47 |
| Msa0014280 | Msa0795320 | 0.824946 | 6.128259e-54 | -8.615850e-47 |
| Msa0014280 | Msa0799120 | 0.822530 | 2.254914e-53 | -8.615850e-47 |
| Msa0014280 | Msa0802600 | 0.811793 | 5.860534e-51 | -8.615850e-47 |
| Msa0014280 | Msa0804870 | 0.805674 | 1.191115e-49 | -8.615850e-47 |
| Msa0014280 | Msa0809920 | 0.854549 | 1.143009e-61 | -8.615850e-47 |
| Msa0014280 | Msa0812050 | 0.803761 | 2.987222e-49 | -8.615850e-47 |
| Msa0014280 | Msa0813710 | 0.804056 | 2.593896e-49 | -8.615850e-47 |
| Msa0014280 | Msa0817190 | 0.807423 | 5.091395e-50 | -8.615850e-47 |
| Msa0014280 | Msa0819150 | 0.819047 | 1.425485e-52 | -8.615850e-47 |
| Msa0014280 | Msa0826240 | 0.843500 | 1.348565e-58 | -8.615850e-47 |
| Msa0014280 | Msa0826360 | 0.833696 | 4.599278e-56 | -8.615850e-47 |
| Msa0014280 | Msa0828910 | 0.803548 | 3.307922e-49 | -8.615850e-47 |
| Msa0014280 | Msa0829250 | -0.804210 | 2.409439e-49 | -8.615850e-47 |
| Msa0014280 | Msa0829990 | 0.804926 | 1.708831e-49 | -8.615850e-47 |
| Msa0014280 | Msa0830930 | 0.816307 | 5.915049e-52 | -8.615850e-47 |
| Msa0014280 | Msa0832950 | 0.808225 | 3.437931e-50 | -8.615850e-47 |
| Msa0014280 | Msa0838870 | 0.823408 | 1.407286e-53 | -8.615850e-47 |
| Msa0014280 | Msa0843950 | 0.818689 | 1.719747e-52 | -8.615850e-47 |
| Msa0014280 | Msa0850480 | 0.854314 | 1.336724e-61 | -8.615850e-47 |
| Msa0014280 | Msa0855260 | 0.814454 | 1.528294e-51 | -8.615850e-47 |
| Msa0014280 | Msa0859040 | 0.813821 | 2.107595e-51 | -8.615850e-47 |
| Msa0014280 | Msa0865810 | 0.812076 | 5.084163e-51 | -8.615850e-47 |
| Msa0014280 | Msa0865820 | 0.802845 | 4.624934e-49 | -8.615850e-47 |
| Msa0014280 | Msa0865830 | 0.846355 | 2.288227e-59 | -8.615850e-47 |
| Msa0014280 | Msa0874750 | 0.853175 | 2.842403e-61 | -8.615850e-47 |
| Msa0014280 | Msa0910560 | 0.806641 | 7.453083e-50 | -8.615850e-47 |
| Msa0014280 | Msa0921790 | 0.812965 | 3.250258e-51 | -8.615850e-47 |
| Msa0014280 | Msa0925940 | 0.831516 | 1.597200e-55 | -8.615850e-47 |
| Msa0014280 | Msa0960580 | 0.803396 | 3.556008e-49 | -8.615850e-47 |
| Msa0014280 | Msa0966580 | 0.811285 | 7.555870e-51 | -8.615850e-47 |
| Msa0014280 | Msa0968990 | 0.804154 | 2.475218e-49 | -8.615850e-47 |
| Msa0014280 | Msa0976400 | 0.849845 | 2.489675e-60 | -8.615850e-47 |
| Msa0014280 | Msa0985380 | 0.808499 | 3.005403e-50 | -8.615850e-47 |
| Msa0014280 | Msa1001120 | 0.808684 | 2.744235e-50 | -8.615850e-47 |
| Msa0014280 | Msa1003730 | 0.833789 | 4.358975e-56 | -8.615850e-47 |
| Msa0014280 | Msa1003920 | 0.842748 | 2.139632e-58 | -8.615850e-47 |
| Msa0014280 | Msa1016100 | 0.829161 | 6.009166e-55 | -8.615850e-47 |
| Msa0014280 | Msa1023430 | 0.825279 | 5.110856e-54 | -8.615850e-47 |
| Msa0014280 | Msa1026890 | 0.819968 | 8.788405e-53 | -8.615850e-47 |
| Msa0014280 | Msa1027340 | 0.846453 | 2.151599e-59 | -8.615850e-47 |
| Msa0014280 | Msa1027400 | 0.837643 | 4.605258e-57 | -8.615850e-47 |
| Msa0014280 | Msa1027910 | 0.844073 | 9.475723e-59 | -8.615850e-47 |
| Msa0014280 | Msa1030210 | 0.879305 | 1.388671e-69 | -8.615850e-47 |
| Msa0014280 | Msa1031780 | 0.809056 | 2.284612e-50 | -8.615850e-47 |
| Msa0014280 | Msa1035050 | 0.835568 | 1.556028e-56 | -8.615850e-47 |
| Msa0014280 | Msa1039150 | -0.809430 | 1.899265e-50 | -8.615850e-47 |
| Msa0014280 | Msa1061840 | 0.842423 | 2.609168e-58 | -8.615850e-47 |
| Msa0014280 | Msa1064240 | 0.808649 | 2.791274e-50 | -8.615850e-47 |
| Msa0014280 | Msa1069250 | 0.869813 | 2.336552e-66 | -8.615850e-47 |
| Msa0014280 | Msa1071350 | 0.812586 | 3.935214e-51 | -8.615850e-47 |
| Msa0014280 | Msa1075090 | 0.848318 | 6.614415e-60 | -8.615850e-47 |
| Msa0014280 | Msa1077970 | 0.842054 | 3.268180e-58 | -8.615850e-47 |
| Msa0014280 | Msa1078120 | -0.818435 | 1.962863e-52 | -8.615850e-47 |
| Msa0014280 | Msa1083660 | -0.816163 | 6.372136e-52 | -8.615850e-47 |
| Msa0014280 | Msa1084890 | 0.829314 | 5.518422e-55 | -8.615850e-47 |
| Msa0014280 | Msa1085820 | 0.802190 | 6.309623e-49 | -8.615850e-47 |
| Msa0014280 | Msa1095590 | 0.802166 | 6.382002e-49 | -8.615850e-47 |
| Msa0014280 | Msa1102210 | 0.874564 | 6.118242e-68 | -8.615850e-47 |
| Msa0014280 | Msa1107250 | 0.812841 | 3.459895e-51 | -8.615850e-47 |
| Msa0014280 | Msa1107510 | 0.829525 | 4.901696e-55 | -8.615850e-47 |
| Msa0014280 | Msa1110900 | 0.839542 | 1.488608e-57 | -8.615850e-47 |
| Msa0014280 | Msa1115980 | 0.834664 | 2.629247e-56 | -8.615850e-47 |
| Msa0014280 | Msa1120580 | 0.851770 | 7.148212e-61 | -8.615850e-47 |
| Msa0014280 | Msa1123440 | -0.801208 | 1.003430e-48 | -8.615850e-47 |
| Msa0014280 | Msa1131120 | 0.871164 | 8.417986e-67 | -8.615850e-47 |
| Msa0014280 | Msa1136630 | 0.809518 | 1.818369e-50 | -8.615850e-47 |
| Msa0014280 | Msa1136760 | 0.808071 | 3.708143e-50 | -8.615850e-47 |
| Msa0014280 | Msa1137750 | 0.844999 | 5.336435e-59 | -8.615850e-47 |
| Msa0014280 | Msa1150740 | 0.810070 | 1.383484e-50 | -8.615850e-47 |
| Msa0014280 | Msa1151070 | 0.824818 | 6.568902e-54 | -8.615850e-47 |
| Msa0014280 | Msa1154240 | 0.804987 | 1.658751e-49 | -8.615850e-47 |
| Msa0014280 | Msa1154570 | 0.843070 | 1.756775e-58 | -8.615850e-47 |
| Msa0014280 | Msa1157110 | 0.841126 | 5.739550e-58 | -8.615850e-47 |
| Msa0014280 | Msa1162430 | 0.828008 | 1.141577e-54 | -8.615850e-47 |
| Msa0014280 | Msa1174280 | 0.820086 | 8.261187e-53 | -8.615850e-47 |
| Msa0014280 | Msa1177650 | 0.821923 | 3.118788e-53 | -8.615850e-47 |
| Msa0014280 | Msa1185270 | 0.823871 | 1.096798e-53 | -8.615850e-47 |
| Msa0014280 | Msa1191270 | 0.819623 | 1.053795e-52 | -8.615850e-47 |
| Msa0014280 | Msa1202110 | 0.843045 | 1.783771e-58 | -8.615850e-47 |
| Msa0014280 | Msa1211610 | 0.854112 | 1.529188e-61 | -8.615850e-47 |
| Msa0014280 | Msa1223560 | 0.815373 | 9.559290e-52 | -8.615850e-47 |
| Msa0014280 | Msa1223960 | 0.804437 | 2.161179e-49 | -8.615850e-47 |
| Msa0014280 | Msa1223990 | 0.825005 | 5.934153e-54 | -8.615850e-47 |
| Msa0014280 | Msa1239190 | 0.836767 | 7.713395e-57 | -8.615850e-47 |
| Msa0014280 | Msa1239210 | 0.813291 | 2.756532e-51 | -8.615850e-47 |
| Msa0014280 | Msa1254870 | 0.845446 | 4.041978e-59 | -8.615850e-47 |
| Msa0014280 | Msa1263500 | 0.809132 | 2.200849e-50 | -8.615850e-47 |
| Msa0014280 | Msa1269200 | 0.810251 | 1.264708e-50 | -8.615850e-47 |
| Msa0014280 | Msa1299480 | 0.844954 | 5.487776e-59 | -8.615850e-47 |
| Msa0014280 | Msa1317740 | 0.820329 | 7.265044e-53 | -8.615850e-47 |
| Msa0014280 | Msa1320160 | 0.842626 | 2.305640e-58 | -8.615850e-47 |
| Msa0014280 | Msa1328430 | 0.845720 | 3.406115e-59 | -8.615850e-47 |
| Msa0014280 | Msa1357570 | 0.835767 | 1.385453e-56 | -8.615850e-47 |
| Msa0014280 | Msa1364690 | 0.805280 | 1.440794e-49 | -8.615850e-47 |
| Msa0014280 | Msa1377050 | 0.810848 | 9.400085e-51 | -8.615850e-47 |
| Msa0014280 | Msa1381300 | -0.819477 | 1.137856e-52 | -8.615850e-47 |
| Msa0014280 | Msa1387610 | 0.814233 | 1.710251e-51 | -8.615850e-47 |
| Msa0014280 | Msa1390200 | 0.804793 | 1.821308e-49 | -8.615850e-47 |
| Msa0014280 | Msa1395250 | 0.817540 | 3.127688e-52 | -8.615850e-47 |
| Msa0014280 | Msa1398120 | 0.812283 | 4.583983e-51 | -8.615850e-47 |
| Msa0014280 | Msa1398140 | 0.800445 | 1.436692e-48 | -8.615850e-47 |
| Msa0014280 | Msa1398320 | 0.800463 | 1.424726e-48 | -8.615850e-47 |
| Msa0014280 | Msa1404050 | 0.804550 | 2.046827e-49 | -8.615850e-47 |
| Msa0014280 | Msa1405040 | -0.822758 | 1.996168e-53 | -8.615850e-47 |
| Msa0014280 | Msa1405500 | 0.840591 | 7.930600e-58 | -8.615850e-47 |
| Msa0014280 | Msa1405530 | 0.819030 | 1.438145e-52 | -8.615850e-47 |
| Msa0014280 | Msa1407040 | 0.813373 | 2.644877e-51 | -8.615850e-47 |
| Msa0014280 | Msa1427000 | 0.843320 | 1.506687e-58 | -8.615850e-47 |
| Msa0014280 | Msa1438160 | 0.850214 | 1.962114e-60 | -8.615850e-47 |
| Msa0014280 | Msa1439780 | 0.845801 | 3.237972e-59 | -8.615850e-47 |
| Msa0014280 | Msa1449470 | 0.818633 | 1.770610e-52 | -8.615850e-47 |
| Msa0014280 | Msa1453890 | 0.827972 | 1.164188e-54 | -8.615850e-47 |
| Msa0014280 | Msa1455480 | 0.801179 | 1.017127e-48 | -8.615850e-47 |
| Msa0014280 | Msa1459920 | 0.829291 | 5.589517e-55 | -8.615850e-47 |
| Msa0014280 | Msa1459930 | 0.837506 | 4.991970e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014280 | MtrunA17_Chr1g0164301 | 94.488 | 254 | 14 | 0 | 1 | 254 | 1 | 254 | 6.00e-170 | 469 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014280 | AT5G08240.1 | 47.059 | 85 | 40 | 2 | 169 | 252 | 176 | 256 | 9.91e-24 | 96.7 |
| Msa0014280 | AT5G23160.1 | 27.972 | 286 | 135 | 11 | 9 | 252 | 14 | 270 | 9.55e-22 | 91.7 |
Find 50 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTAGTGATAATGATATTT+TGG | 0.081777 | 1_1:-22603988 | Msa0014280:CDS |
| TCATTTGTTGAAGGTTTATT+TGG | 0.138550 | 1_1:+22605344 | None:intergenic |
| ATCATTCTTTGACATAATTT+TGG | 0.171434 | 1_1:+22603871 | None:intergenic |
| ACCTGTGTTGGTGTATAATA+AGG | 0.196392 | 1_1:+22605080 | None:intergenic |
| AGCTTCAAGCGGCACCGTTT+TGG | 0.297229 | 1_1:+22605226 | None:intergenic |
| GTGATTATGGAAGGACTTCT+TGG | 0.303559 | 1_1:-22603815 | Msa0014280:CDS |
| AGCCTTCGTTCTTGTCGTTT+TGG | 0.310594 | 1_1:+22604106 | None:intergenic |
| GCCGTCTACGGTGGTGCTCC+CGG | 0.371638 | 1_1:-22605108 | Msa0014280:CDS |
| AGTATAGACATTCCAACTAT+AGG | 0.430345 | 1_1:+22604019 | None:intergenic |
| TCTGTAATAATGTCATCAAT+TGG | 0.442337 | 1_1:+22604166 | None:intergenic |
| ACCGTCAATTCCGCCGTCTA+CGG | 0.455743 | 1_1:-22605120 | Msa0014280:CDS |
| TTTGATGAATCATTTGTTGA+AGG | 0.456259 | 1_1:+22605335 | None:intergenic |
| CCTGTGTTGGTGTATAATAA+GGG | 0.458661 | 1_1:+22605081 | None:intergenic |
| CAAAGCAAAAGAAAAGTAGT+TGG | 0.462094 | 1_1:-22605289 | Msa0014280:CDS |
| AGTTCATATGATCCTATAGT+TGG | 0.462595 | 1_1:-22604031 | Msa0014280:CDS |
| CCGTCTACGGTGGTGCTCCC+GGG | 0.464698 | 1_1:-22605107 | Msa0014280:CDS |
| CGGAATTGACGGTGGAGGAT+TGG | 0.468555 | 1_1:+22605130 | None:intergenic |
| CCATTCTATGTACTTCAGCT+TGG | 0.478889 | 1_1:-22603952 | Msa0014280:CDS |
| ACCGTAGACGGCGGAATTGA+CGG | 0.482737 | 1_1:+22605119 | None:intergenic |
| TGATTATGGAAGGACTTCTT+GGG | 0.486920 | 1_1:-22603814 | Msa0014280:CDS |
| TGATCGAACAACCCACCTAC+TGG | 0.491103 | 1_1:+22603690 | None:intergenic |
| GGTGTATAATAAGGGGTGCC+CGG | 0.500762 | 1_1:+22605089 | None:intergenic |
| CCAAAATATCATTATCACTA+AGG | 0.503699 | 1_1:+22603988 | None:intergenic |
| TAGTGGTGTTGGAAATTATG+AGG | 0.517184 | 1_1:-22603903 | Msa0014280:CDS |
| CCCGGGAGCACCACCGTAGA+CGG | 0.528265 | 1_1:+22605107 | None:intergenic |
| GGTTAAGGTAGGCCAGTAGG+TGG | 0.528338 | 1_1:-22603702 | Msa0014280:three_prime_UTR |
| TGTTCGATCATGTCGTCTGT+TGG | 0.533378 | 1_1:-22603677 | Msa0014280:three_prime_UTR |
| CCAAGCTGAAGTACATAGAA+TGG | 0.538851 | 1_1:+22603952 | None:intergenic |
| TCGATCATGTCGTCTGTTGG+TGG | 0.554594 | 1_1:-22603674 | Msa0014280:three_prime_UTR |
| TGTTTGGTTCAGACAAGGCA+TGG | 0.557886 | 1_1:-22604190 | Msa0014280:intron |
| ATTGACGGTGGAGGATTGGT+TGG | 0.565173 | 1_1:+22605134 | None:intergenic |
| GATGAAGTCAACGTCCAAAA+CGG | 0.565444 | 1_1:-22605240 | Msa0014280:CDS |
| TTTGGTTAAGGTAGGCCAGT+AGG | 0.582540 | 1_1:-22603705 | Msa0014280:three_prime_UTR |
| GACGGCGGAATTGACGGTGG+AGG | 0.582722 | 1_1:+22605125 | None:intergenic |
| TCTCTCATTATTCAAAGTCA+CGG | 0.583059 | 1_1:-22605199 | Msa0014280:CDS |
| GTGTATAATAAGGGGTGCCC+GGG | 0.583548 | 1_1:+22605090 | None:intergenic |
| GTTAAGGTAGGCCAGTAGGT+GGG | 0.593861 | 1_1:-22603701 | Msa0014280:three_prime_UTR |
| ACAGAAGACACACATGTACA+AGG | 0.596924 | 1_1:-22604148 | Msa0014280:CDS |
| AATTATGTCAAAGAATGATG+TGG | 0.599103 | 1_1:-22603867 | Msa0014280:CDS |
| GTCAATTCCGCCGTCTACGG+TGG | 0.605008 | 1_1:-22605117 | Msa0014280:CDS |
| ATATATATACATACCTGTGT+TGG | 0.616378 | 1_1:+22605068 | None:intergenic |
| GTTGGAAATTATGAGGAAGA+TGG | 0.618802 | 1_1:-22603896 | Msa0014280:CDS |
| GACCAAAACGACAAGAACGA+AGG | 0.624397 | 1_1:-22604108 | Msa0014280:CDS |
| CCCTTATTATACACCAACAC+AGG | 0.642258 | 1_1:-22605081 | Msa0014280:intron |
| TGAGAGAATGAAGCTTCAAG+CGG | 0.647573 | 1_1:+22605215 | None:intergenic |
| GGGAGCACCACCGTAGACGG+CGG | 0.683818 | 1_1:+22605110 | None:intergenic |
| CTGTGTTGGTGTATAATAAG+GGG | 0.699987 | 1_1:+22605082 | None:intergenic |
| ACACCACTATTTCTAAAACG+TGG | 0.710690 | 1_1:+22603917 | None:intergenic |
| GTAGACGGCGGAATTGACGG+TGG | 0.719951 | 1_1:+22605122 | None:intergenic |
| CTTCTTGGGAGAAATAATCG+AGG | 0.735972 | 1_1:-22603800 | Msa0014280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTATGTTAACA+TGG | - | chr1_1:22604069-22604088 | Msa0014280:CDS | 10.0% |
| !! | TATTATTAAATTGACTAAAA+TGG | - | chr1_1:22604178-22604197 | Msa0014280:CDS | 10.0% |
| !! | ATTATTAAATTGACTAAAAT+GGG | - | chr1_1:22604179-22604198 | Msa0014280:CDS | 10.0% |
| !!! | AAGTATAATTTTTTTTTTGA+AGG | - | chr1_1:22604495-22604514 | Msa0014280:intron | 10.0% |
| !! | TAATAAAAGTAATTAAACAA+AGG | + | chr1_1:22604575-22604594 | None:intergenic | 10.0% |
| !! | TTTATGAAAAAAAATCAAAA+TGG | + | chr1_1:22604628-22604647 | None:intergenic | 10.0% |
| !! | AAAAAAAAATTATGTTAACA+TGG | - | chr1_1:22604069-22604088 | Msa0014280:CDS | 10.0% |
| !! | TATTATTAAATTGACTAAAA+TGG | - | chr1_1:22604178-22604197 | Msa0014280:CDS | 10.0% |
| !! | ATTATTAAATTGACTAAAAT+GGG | - | chr1_1:22604179-22604198 | Msa0014280:CDS | 10.0% |
| !!! | AAGTATAATTTTTTTTTTGA+AGG | - | chr1_1:22604495-22604514 | Msa0014280:intron | 10.0% |
| !! | TAATAAAAGTAATTAAACAA+AGG | + | chr1_1:22604575-22604594 | None:intergenic | 10.0% |
| !! | TTTATGAAAAAAAATCAAAA+TGG | + | chr1_1:22604628-22604647 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTCTTTTTCTGA+AGG | + | chr1_1:22604366-22604385 | None:intergenic | 15.0% |
| !!! | TTTTCAAAAAATGAATTTCT+TGG | + | chr1_1:22604442-22604461 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTTGTTAATGTT+TGG | - | chr1_1:22604772-22604791 | Msa0014280:intron | 15.0% |
| !!! | TTTTTTTTTTCTTTTTCTGA+AGG | + | chr1_1:22604366-22604385 | None:intergenic | 15.0% |
| !!! | TTTTCAAAAAATGAATTTCT+TGG | + | chr1_1:22604442-22604461 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTTGTTAATGTT+TGG | - | chr1_1:22604772-22604791 | Msa0014280:intron | 15.0% |
| !!! | AAAACAAGTTCATGATTTTT+AGG | - | chr1_1:22603985-22604004 | Msa0014280:CDS | 20.0% |
| !!! | AAACAAGTTCATGATTTTTA+GGG | - | chr1_1:22603986-22604005 | Msa0014280:CDS | 20.0% |
| !!! | CAACTATACTTTCTTTTTTT+TGG | - | chr1_1:22604280-22604299 | Msa0014280:intron | 20.0% |
| !!! | CTTAGTGATAATGATATTTT+GGG | - | chr1_1:22604991-22605010 | Msa0014280:intron | 20.0% |
| !!! | TTAGTGATAATGATATTTTG+GGG | - | chr1_1:22604992-22605011 | Msa0014280:intron | 20.0% |
| !!! | ATCATTCTTTGACATAATTT+TGG | + | chr1_1:22605110-22605129 | None:intergenic | 20.0% |
| !! | GTATAAGAAAAAAGTGATTA+TGG | - | chr1_1:22605150-22605169 | Msa0014280:CDS | 20.0% |
| !! | TTACTCAAAAAAGGAAAAAA+GGG | - | chr1_1:22605230-22605249 | Msa0014280:CDS | 20.0% |
| !!! | AAAAAAGATTCTTGTGATTT+TGG | - | chr1_1:22605255-22605274 | Msa0014280:CDS | 20.0% |
| !!! | AAAACAAGTTCATGATTTTT+AGG | - | chr1_1:22603985-22604004 | Msa0014280:CDS | 20.0% |
| !!! | AAACAAGTTCATGATTTTTA+GGG | - | chr1_1:22603986-22604005 | Msa0014280:CDS | 20.0% |
| !!! | CAACTATACTTTCTTTTTTT+TGG | - | chr1_1:22604280-22604299 | Msa0014280:intron | 20.0% |
| !!! | CTTAGTGATAATGATATTTT+GGG | - | chr1_1:22604991-22605010 | Msa0014280:intron | 20.0% |
| !!! | TTAGTGATAATGATATTTTG+GGG | - | chr1_1:22604992-22605011 | Msa0014280:intron | 20.0% |
| !!! | ATCATTCTTTGACATAATTT+TGG | + | chr1_1:22605110-22605129 | None:intergenic | 20.0% |
| !! | GTATAAGAAAAAAGTGATTA+TGG | - | chr1_1:22605150-22605169 | Msa0014280:CDS | 20.0% |
| !! | TTACTCAAAAAAGGAAAAAA+GGG | - | chr1_1:22605230-22605249 | Msa0014280:CDS | 20.0% |
| !!! | AAAAAAGATTCTTGTGATTT+TGG | - | chr1_1:22605255-22605274 | Msa0014280:CDS | 20.0% |
| !!! | AGATTTTGAGTTTTTGGTTT+TGG | + | chr1_1:22603575-22603594 | None:intergenic | 25.0% |
| !!! | GGTTTTAGATTTTGAGTTTT+TGG | + | chr1_1:22603581-22603600 | None:intergenic | 25.0% |
| ! | AAAGCAACATAGAAAAATAG+AGG | + | chr1_1:22603602-22603621 | None:intergenic | 25.0% |
| !! | TCATTTGTTGAAGGTTTATT+TGG | + | chr1_1:22603637-22603656 | None:intergenic | 25.0% |
| !! | TTTGATGAATCATTTGTTGA+AGG | + | chr1_1:22603646-22603665 | None:intergenic | 25.0% |
| ! | ATATATATACATACCTGTGT+TGG | + | chr1_1:22603913-22603932 | None:intergenic | 25.0% |
| !!! | AAGATCATGAACTTGTTAAT+AGG | + | chr1_1:22603952-22603971 | None:intergenic | 25.0% |
| ! | AGTATTGTGTAGCTTAATTA+AGG | - | chr1_1:22604014-22604033 | Msa0014280:CDS | 25.0% |
| ! | AAAATTTACTACTTCAAGTG+TGG | + | chr1_1:22604152-22604171 | None:intergenic | 25.0% |
| !! | ATTTGTATTTTACCTAAGGA+AGG | + | chr1_1:22604230-22604249 | None:intergenic | 25.0% |
| !! | TCGTATTTGTATTTTACCTA+AGG | + | chr1_1:22604234-22604253 | None:intergenic | 25.0% |
| ! | GAAAGACATACATTTAAGAA+GGG | + | chr1_1:22604257-22604276 | None:intergenic | 25.0% |
| ! | AGAAAGACATACATTTAAGA+AGG | + | chr1_1:22604258-22604277 | None:intergenic | 25.0% |
| !! | ATTGACTTAATTAAACAGCT+AGG | + | chr1_1:22604408-22604427 | None:intergenic | 25.0% |
| ! | TCTGTAATAATGTCATCAAT+TGG | + | chr1_1:22604815-22604834 | None:intergenic | 25.0% |
| ! | CCAAAATATCATTATCACTA+AGG | + | chr1_1:22604993-22605012 | None:intergenic | 25.0% |
| !!! | CCTTAGTGATAATGATATTT+TGG | - | chr1_1:22604990-22605009 | Msa0014280:intron | 25.0% |
| ! | AATTATGTCAAAGAATGATG+TGG | - | chr1_1:22605111-22605130 | Msa0014280:CDS | 25.0% |
| ! | AAGAAAAAAGTGATTATGGA+AGG | - | chr1_1:22605154-22605173 | Msa0014280:CDS | 25.0% |
| !! | ATTCTTGTGTTACTCAAAAA+AGG | - | chr1_1:22605221-22605240 | Msa0014280:CDS | 25.0% |
| ! | GTTACTCAAAAAAGGAAAAA+AGG | - | chr1_1:22605229-22605248 | Msa0014280:CDS | 25.0% |
| !!! | AGATTTTGAGTTTTTGGTTT+TGG | + | chr1_1:22603575-22603594 | None:intergenic | 25.0% |
| !!! | GGTTTTAGATTTTGAGTTTT+TGG | + | chr1_1:22603581-22603600 | None:intergenic | 25.0% |
| ! | AAAGCAACATAGAAAAATAG+AGG | + | chr1_1:22603602-22603621 | None:intergenic | 25.0% |
| !! | TCATTTGTTGAAGGTTTATT+TGG | + | chr1_1:22603637-22603656 | None:intergenic | 25.0% |
| !! | TTTGATGAATCATTTGTTGA+AGG | + | chr1_1:22603646-22603665 | None:intergenic | 25.0% |
| ! | ATATATATACATACCTGTGT+TGG | + | chr1_1:22603913-22603932 | None:intergenic | 25.0% |
| !!! | AAGATCATGAACTTGTTAAT+AGG | + | chr1_1:22603952-22603971 | None:intergenic | 25.0% |
| ! | AGTATTGTGTAGCTTAATTA+AGG | - | chr1_1:22604014-22604033 | Msa0014280:CDS | 25.0% |
| ! | AAAATTTACTACTTCAAGTG+TGG | + | chr1_1:22604152-22604171 | None:intergenic | 25.0% |
| !! | ATTTGTATTTTACCTAAGGA+AGG | + | chr1_1:22604230-22604249 | None:intergenic | 25.0% |
| !! | TCGTATTTGTATTTTACCTA+AGG | + | chr1_1:22604234-22604253 | None:intergenic | 25.0% |
| ! | GAAAGACATACATTTAAGAA+GGG | + | chr1_1:22604257-22604276 | None:intergenic | 25.0% |
| ! | AGAAAGACATACATTTAAGA+AGG | + | chr1_1:22604258-22604277 | None:intergenic | 25.0% |
| !! | ATTGACTTAATTAAACAGCT+AGG | + | chr1_1:22604408-22604427 | None:intergenic | 25.0% |
| ! | TCTGTAATAATGTCATCAAT+TGG | + | chr1_1:22604815-22604834 | None:intergenic | 25.0% |
| ! | CCAAAATATCATTATCACTA+AGG | + | chr1_1:22604993-22605012 | None:intergenic | 25.0% |
| !!! | CCTTAGTGATAATGATATTT+TGG | - | chr1_1:22604990-22605009 | Msa0014280:intron | 25.0% |
| ! | AATTATGTCAAAGAATGATG+TGG | - | chr1_1:22605111-22605130 | Msa0014280:CDS | 25.0% |
| ! | AAGAAAAAAGTGATTATGGA+AGG | - | chr1_1:22605154-22605173 | Msa0014280:CDS | 25.0% |
| !! | ATTCTTGTGTTACTCAAAAA+AGG | - | chr1_1:22605221-22605240 | Msa0014280:CDS | 25.0% |
| ! | GTTACTCAAAAAAGGAAAAA+AGG | - | chr1_1:22605229-22605248 | Msa0014280:CDS | 25.0% |
| !!! | CTTTTCTTTTGCTTTGGAAT+AGG | + | chr1_1:22603685-22603704 | None:intergenic | 30.0% |
| !! | CAACTACTTTTCTTTTGCTT+TGG | + | chr1_1:22603691-22603710 | None:intergenic | 30.0% |
| CAAAGCAAAAGAAAAGTAGT+TGG | - | chr1_1:22603689-22603708 | Msa0014280:three_prime_UTR | 30.0% | |
| !!! | AGAAAAGTAGTTGGTTTTCA+TGG | - | chr1_1:22603698-22603717 | Msa0014280:three_prime_UTR | 30.0% |
| TCTCTCATTATTCAAAGTCA+CGG | - | chr1_1:22603779-22603798 | Msa0014280:exon | 30.0% | |
| !! | TCATGAACTTGTTAATAGGT+TGG | + | chr1_1:22603948-22603967 | None:intergenic | 30.0% |
| ! | TATTTTACCTAAGGAAGGAA+GGG | + | chr1_1:22604225-22604244 | None:intergenic | 30.0% |
| AGTTCATATGATCCTATAGT+TGG | - | chr1_1:22604947-22604966 | Msa0014280:intron | 30.0% | |
| AGTATAGACATTCCAACTAT+AGG | + | chr1_1:22604962-22604981 | None:intergenic | 30.0% | |
| !!! | ATACCACGTTTTAGAAATAG+TGG | - | chr1_1:22605058-22605077 | Msa0014280:intron | 30.0% |
| !!! | GATTCTTGTGATTTTGGTTA+AGG | - | chr1_1:22605261-22605280 | Msa0014280:CDS | 30.0% |
| !!! | CTTTTCTTTTGCTTTGGAAT+AGG | + | chr1_1:22603685-22603704 | None:intergenic | 30.0% |
| !! | CAACTACTTTTCTTTTGCTT+TGG | + | chr1_1:22603691-22603710 | None:intergenic | 30.0% |
| CAAAGCAAAAGAAAAGTAGT+TGG | - | chr1_1:22603689-22603708 | Msa0014280:three_prime_UTR | 30.0% | |
| !!! | AGAAAAGTAGTTGGTTTTCA+TGG | - | chr1_1:22603698-22603717 | Msa0014280:three_prime_UTR | 30.0% |
| TCTCTCATTATTCAAAGTCA+CGG | - | chr1_1:22603779-22603798 | Msa0014280:exon | 30.0% | |
| !! | TCATGAACTTGTTAATAGGT+TGG | + | chr1_1:22603948-22603967 | None:intergenic | 30.0% |
| ! | TATTTTACCTAAGGAAGGAA+GGG | + | chr1_1:22604225-22604244 | None:intergenic | 30.0% |
| AGTTCATATGATCCTATAGT+TGG | - | chr1_1:22604947-22604966 | Msa0014280:intron | 30.0% | |
| AGTATAGACATTCCAACTAT+AGG | + | chr1_1:22604962-22604981 | None:intergenic | 30.0% | |
| !!! | ATACCACGTTTTAGAAATAG+TGG | - | chr1_1:22605058-22605077 | Msa0014280:intron | 30.0% |
| !!! | GATTCTTGTGATTTTGGTTA+AGG | - | chr1_1:22605261-22605280 | Msa0014280:CDS | 30.0% |
| ! | CTGTGTTGGTGTATAATAAG+GGG | + | chr1_1:22603899-22603918 | None:intergenic | 35.0% |
| ! | CCTGTGTTGGTGTATAATAA+GGG | + | chr1_1:22603900-22603919 | None:intergenic | 35.0% |
| ! | ACCTGTGTTGGTGTATAATA+AGG | + | chr1_1:22603901-22603920 | None:intergenic | 35.0% |
| TCTCAAAAATGTGTGGTAGT+TGG | + | chr1_1:22604109-22604128 | None:intergenic | 35.0% | |
| ATGGTTCTCTCAAAAATGTG+TGG | + | chr1_1:22604116-22604135 | None:intergenic | 35.0% | |
| ! | GTGTGGTAATTTGTGGTAAA+TGG | + | chr1_1:22604135-22604154 | None:intergenic | 35.0% |
| ACTTCAAGTGTGGTAATTTG+TGG | + | chr1_1:22604142-22604161 | None:intergenic | 35.0% | |
| ! | GTATTTTACCTAAGGAAGGA+AGG | + | chr1_1:22604226-22604245 | None:intergenic | 35.0% |
| ! | GTTAATGTTTGGTTCAGACA+AGG | - | chr1_1:22604783-22604802 | Msa0014280:intron | 35.0% |
| !! | TGAGGTTTTTGATTGTCGTT+TGG | + | chr1_1:22604916-22604935 | None:intergenic | 35.0% |
| ! | ATGAACTTCGTACGTTTTTG+AGG | + | chr1_1:22604934-22604953 | None:intergenic | 35.0% |
| !! | ACACCACTATTTCTAAAACG+TGG | + | chr1_1:22605064-22605083 | None:intergenic | 35.0% |
| !!! | CGTTTTAGAAATAGTGGTGT+TGG | - | chr1_1:22605064-22605083 | Msa0014280:intron | 35.0% |
| ! | TAGTGGTGTTGGAAATTATG+AGG | - | chr1_1:22605075-22605094 | Msa0014280:intron | 35.0% |
| GTTGGAAATTATGAGGAAGA+TGG | - | chr1_1:22605082-22605101 | Msa0014280:CDS | 35.0% | |
| !!! | TGATGTGGATTTTGATTCTG+AGG | - | chr1_1:22605126-22605145 | Msa0014280:CDS | 35.0% |
| TGATTATGGAAGGACTTCTT+GGG | - | chr1_1:22605164-22605183 | Msa0014280:CDS | 35.0% | |
| !!! | CTTGTGATTTTGGTTAAGGT+AGG | - | chr1_1:22605265-22605284 | Msa0014280:CDS | 35.0% |
| ! | CTGTGTTGGTGTATAATAAG+GGG | + | chr1_1:22603899-22603918 | None:intergenic | 35.0% |
| ! | CCTGTGTTGGTGTATAATAA+GGG | + | chr1_1:22603900-22603919 | None:intergenic | 35.0% |
| ! | ACCTGTGTTGGTGTATAATA+AGG | + | chr1_1:22603901-22603920 | None:intergenic | 35.0% |
| TCTCAAAAATGTGTGGTAGT+TGG | + | chr1_1:22604109-22604128 | None:intergenic | 35.0% | |
| ATGGTTCTCTCAAAAATGTG+TGG | + | chr1_1:22604116-22604135 | None:intergenic | 35.0% | |
| ! | GTGTGGTAATTTGTGGTAAA+TGG | + | chr1_1:22604135-22604154 | None:intergenic | 35.0% |
| ACTTCAAGTGTGGTAATTTG+TGG | + | chr1_1:22604142-22604161 | None:intergenic | 35.0% | |
| ! | GTATTTTACCTAAGGAAGGA+AGG | + | chr1_1:22604226-22604245 | None:intergenic | 35.0% |
| ! | GTTAATGTTTGGTTCAGACA+AGG | - | chr1_1:22604783-22604802 | Msa0014280:intron | 35.0% |
| !! | TGAGGTTTTTGATTGTCGTT+TGG | + | chr1_1:22604916-22604935 | None:intergenic | 35.0% |
| ! | ATGAACTTCGTACGTTTTTG+AGG | + | chr1_1:22604934-22604953 | None:intergenic | 35.0% |
| !! | ACACCACTATTTCTAAAACG+TGG | + | chr1_1:22605064-22605083 | None:intergenic | 35.0% |
| !!! | CGTTTTAGAAATAGTGGTGT+TGG | - | chr1_1:22605064-22605083 | Msa0014280:intron | 35.0% |
| ! | TAGTGGTGTTGGAAATTATG+AGG | - | chr1_1:22605075-22605094 | Msa0014280:intron | 35.0% |
| GTTGGAAATTATGAGGAAGA+TGG | - | chr1_1:22605082-22605101 | Msa0014280:CDS | 35.0% | |
| !!! | TGATGTGGATTTTGATTCTG+AGG | - | chr1_1:22605126-22605145 | Msa0014280:CDS | 35.0% |
| TGATTATGGAAGGACTTCTT+GGG | - | chr1_1:22605164-22605183 | Msa0014280:CDS | 35.0% | |
| !!! | CTTGTGATTTTGGTTAAGGT+AGG | - | chr1_1:22605265-22605284 | Msa0014280:CDS | 35.0% |
| !!! | GTAGTTGGTTTTCATGGAGA+TGG | - | chr1_1:22603704-22603723 | Msa0014280:three_prime_UTR | 40.0% |
| GATGAAGTCAACGTCCAAAA+CGG | - | chr1_1:22603738-22603757 | Msa0014280:three_prime_UTR | 40.0% | |
| TGAGAGAATGAAGCTTCAAG+CGG | + | chr1_1:22603766-22603785 | None:intergenic | 40.0% | |
| CCCTTATTATACACCAACAC+AGG | - | chr1_1:22603897-22603916 | Msa0014280:CDS | 40.0% | |
| ACAGAAGACACACATGTACA+AGG | - | chr1_1:22604830-22604849 | Msa0014280:intron | 40.0% | |
| CCAAGCTGAAGTACATAGAA+TGG | + | chr1_1:22605029-22605048 | None:intergenic | 40.0% | |
| CCATTCTATGTACTTCAGCT+TGG | - | chr1_1:22605026-22605045 | Msa0014280:intron | 40.0% | |
| GTGATTATGGAAGGACTTCT+TGG | - | chr1_1:22605163-22605182 | Msa0014280:CDS | 40.0% | |
| CTTCTTGGGAGAAATAATCG+AGG | - | chr1_1:22605178-22605197 | Msa0014280:CDS | 40.0% | |
| !!! | GTAGTTGGTTTTCATGGAGA+TGG | - | chr1_1:22603704-22603723 | Msa0014280:three_prime_UTR | 40.0% |
| GATGAAGTCAACGTCCAAAA+CGG | - | chr1_1:22603738-22603757 | Msa0014280:three_prime_UTR | 40.0% | |
| TGAGAGAATGAAGCTTCAAG+CGG | + | chr1_1:22603766-22603785 | None:intergenic | 40.0% | |
| CCCTTATTATACACCAACAC+AGG | - | chr1_1:22603897-22603916 | Msa0014280:CDS | 40.0% | |
| ACAGAAGACACACATGTACA+AGG | - | chr1_1:22604830-22604849 | Msa0014280:intron | 40.0% | |
| CCAAGCTGAAGTACATAGAA+TGG | + | chr1_1:22605029-22605048 | None:intergenic | 40.0% | |
| CCATTCTATGTACTTCAGCT+TGG | - | chr1_1:22605026-22605045 | Msa0014280:intron | 40.0% | |
| GTGATTATGGAAGGACTTCT+TGG | - | chr1_1:22605163-22605182 | Msa0014280:CDS | 40.0% | |
| CTTCTTGGGAGAAATAATCG+AGG | - | chr1_1:22605178-22605197 | Msa0014280:CDS | 40.0% | |
| AATACGACCCTTCCTTCCTT+AGG | - | chr1_1:22604215-22604234 | Msa0014280:intron | 45.0% | |
| ! | TGTTTGGTTCAGACAAGGCA+TGG | - | chr1_1:22604788-22604807 | Msa0014280:intron | 45.0% |
| !!! | TCTTGTCGTTTTGGTCGTGT+TGG | + | chr1_1:22604866-22604885 | None:intergenic | 45.0% |
| GACCAAAACGACAAGAACGA+AGG | - | chr1_1:22604870-22604889 | Msa0014280:intron | 45.0% | |
| !! | AGCCTTCGTTCTTGTCGTTT+TGG | + | chr1_1:22604875-22604894 | None:intergenic | 45.0% |
| TTTGGTTAAGGTAGGCCAGT+AGG | - | chr1_1:22605273-22605292 | Msa0014280:CDS | 45.0% | |
| TGTTCGATCATGTCGTCTGT+TGG | - | chr1_1:22605301-22605320 | Msa0014280:CDS | 45.0% | |
| AATACGACCCTTCCTTCCTT+AGG | - | chr1_1:22604215-22604234 | Msa0014280:intron | 45.0% | |
| ! | TGTTTGGTTCAGACAAGGCA+TGG | - | chr1_1:22604788-22604807 | Msa0014280:intron | 45.0% |
| !!! | TCTTGTCGTTTTGGTCGTGT+TGG | + | chr1_1:22604866-22604885 | None:intergenic | 45.0% |
| GACCAAAACGACAAGAACGA+AGG | - | chr1_1:22604870-22604889 | Msa0014280:intron | 45.0% | |
| !! | AGCCTTCGTTCTTGTCGTTT+TGG | + | chr1_1:22604875-22604894 | None:intergenic | 45.0% |
| TTTGGTTAAGGTAGGCCAGT+AGG | - | chr1_1:22605273-22605292 | Msa0014280:CDS | 45.0% | |
| TGTTCGATCATGTCGTCTGT+TGG | - | chr1_1:22605301-22605320 | Msa0014280:CDS | 45.0% | |
| !!! | TTTTTTTTTAATTATGTTAT+AGG | + | chr1_1:22604058-22604077 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAATTATGTTAT+AGG | + | chr1_1:22604058-22604077 | None:intergenic | 5.0% |
| ! | ATTGACGGTGGAGGATTGGT+TGG | + | chr1_1:22603847-22603866 | None:intergenic | 50.0% |
| !! | GTGTATAATAAGGGGTGCCC+GGG | + | chr1_1:22603891-22603910 | None:intergenic | 50.0% |
| !! | GGTGTATAATAAGGGGTGCC+CGG | + | chr1_1:22603892-22603911 | None:intergenic | 50.0% |
| GTTAAGGTAGGCCAGTAGGT+GGG | - | chr1_1:22605277-22605296 | Msa0014280:CDS | 50.0% | |
| TGATCGAACAACCCACCTAC+TGG | + | chr1_1:22605291-22605310 | None:intergenic | 50.0% | |
| TCGATCATGTCGTCTGTTGG+TGG | - | chr1_1:22605304-22605323 | Msa0014280:CDS | 50.0% | |
| ! | ATTGACGGTGGAGGATTGGT+TGG | + | chr1_1:22603847-22603866 | None:intergenic | 50.0% |
| !! | GTGTATAATAAGGGGTGCCC+GGG | + | chr1_1:22603891-22603910 | None:intergenic | 50.0% |
| !! | GGTGTATAATAAGGGGTGCC+CGG | + | chr1_1:22603892-22603911 | None:intergenic | 50.0% |
| GTTAAGGTAGGCCAGTAGGT+GGG | - | chr1_1:22605277-22605296 | Msa0014280:CDS | 50.0% | |
| TGATCGAACAACCCACCTAC+TGG | + | chr1_1:22605291-22605310 | None:intergenic | 50.0% | |
| TCGATCATGTCGTCTGTTGG+TGG | - | chr1_1:22605304-22605323 | Msa0014280:CDS | 50.0% | |
| ! | AGCTTCAAGCGGCACCGTTT+TGG | + | chr1_1:22603755-22603774 | None:intergenic | 55.0% |
| CGGAATTGACGGTGGAGGAT+TGG | + | chr1_1:22603851-22603870 | None:intergenic | 55.0% | |
| ACCGTCAATTCCGCCGTCTA+CGG | - | chr1_1:22603858-22603877 | Msa0014280:CDS | 55.0% | |
| ACCGTAGACGGCGGAATTGA+CGG | + | chr1_1:22603862-22603881 | None:intergenic | 55.0% | |
| GGTTAAGGTAGGCCAGTAGG+TGG | - | chr1_1:22605276-22605295 | Msa0014280:CDS | 55.0% | |
| ! | AGCTTCAAGCGGCACCGTTT+TGG | + | chr1_1:22603755-22603774 | None:intergenic | 55.0% |
| CGGAATTGACGGTGGAGGAT+TGG | + | chr1_1:22603851-22603870 | None:intergenic | 55.0% | |
| ACCGTCAATTCCGCCGTCTA+CGG | - | chr1_1:22603858-22603877 | Msa0014280:CDS | 55.0% | |
| ACCGTAGACGGCGGAATTGA+CGG | + | chr1_1:22603862-22603881 | None:intergenic | 55.0% | |
| GGTTAAGGTAGGCCAGTAGG+TGG | - | chr1_1:22605276-22605295 | Msa0014280:CDS | 55.0% | |
| GTAGACGGCGGAATTGACGG+TGG | + | chr1_1:22603859-22603878 | None:intergenic | 60.0% | |
| GTCAATTCCGCCGTCTACGG+TGG | - | chr1_1:22603861-22603880 | Msa0014280:CDS | 60.0% | |
| GTAGACGGCGGAATTGACGG+TGG | + | chr1_1:22603859-22603878 | None:intergenic | 60.0% | |
| GTCAATTCCGCCGTCTACGG+TGG | - | chr1_1:22603861-22603880 | Msa0014280:CDS | 60.0% | |
| GACGGCGGAATTGACGGTGG+AGG | + | chr1_1:22603856-22603875 | None:intergenic | 65.0% | |
| GACGGCGGAATTGACGGTGG+AGG | + | chr1_1:22603856-22603875 | None:intergenic | 65.0% | |
| !! | GGGAGCACCACCGTAGACGG+CGG | + | chr1_1:22603871-22603890 | None:intergenic | 70.0% |
| GCCGTCTACGGTGGTGCTCC+CGG | - | chr1_1:22603870-22603889 | Msa0014280:CDS | 70.0% | |
| !! | CCCGGGAGCACCACCGTAGA+CGG | + | chr1_1:22603874-22603893 | None:intergenic | 70.0% |
| CCGTCTACGGTGGTGCTCCC+GGG | - | chr1_1:22603871-22603890 | Msa0014280:CDS | 70.0% | |
| !! | GGGAGCACCACCGTAGACGG+CGG | + | chr1_1:22603871-22603890 | None:intergenic | 70.0% |
| GCCGTCTACGGTGGTGCTCC+CGG | - | chr1_1:22603870-22603889 | Msa0014280:CDS | 70.0% | |
| !! | CCCGGGAGCACCACCGTAGA+CGG | + | chr1_1:22603874-22603893 | None:intergenic | 70.0% |
| CCGTCTACGGTGGTGCTCCC+GGG | - | chr1_1:22603871-22603890 | Msa0014280:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 22603568 | 22605432 | 22603568 | ID=Msa0014280;Name=Msa0014280 |
| chr1_1 | mRNA | 22603568 | 22605432 | 22603568 | ID=Msa0014280-mRNA-1;Parent=Msa0014280;Name=Msa0014280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|219|254 |
| chr1_1 | exon | 22603568 | 22604200 | 22603568 | ID=Msa0014280-mRNA-1:exon:7961;Parent=Msa0014280-mRNA-1 |
| chr1_1 | exon | 22605082 | 22605432 | 22605082 | ID=Msa0014280-mRNA-1:exon:7960;Parent=Msa0014280-mRNA-1 |
| chr1_1 | CDS | 22605082 | 22605432 | 22605082 | ID=Msa0014280-mRNA-1:cds;Parent=Msa0014280-mRNA-1 |
| chr1_1 | CDS | 22603787 | 22604200 | 22603787 | ID=Msa0014280-mRNA-1:cds;Parent=Msa0014280-mRNA-1 |
| chr1_1 | three_prime_UTR | 22603568 | 22603786 | 22603568 | ID=Msa0014280-mRNA-1:three_prime_utr;Parent=Msa0014280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
