Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1108960 | XP_024626263.2 | 97.347 | 603 | 16 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1223 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1108960 | sp|O82647|PDC1_ARATH | 84.893 | 609 | 84 | 2 | 1 | 603 | 1 | 607 | 0.0 | 1070 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1108960 | A0A396H177 | 97.347 | 603 | 16 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1223 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0021400 | Msa1108960 | 0.813409 | 2.597817e-51 | -8.615850e-47 |
Msa0029700 | Msa1108960 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
Msa0036560 | Msa1108960 | -0.825321 | 4.996433e-54 | -8.615850e-47 |
Msa0048410 | Msa1108960 | -0.801765 | 7.714536e-49 | -8.615850e-47 |
Msa0049670 | Msa1108960 | -0.807432 | 5.070546e-50 | -8.615850e-47 |
Msa0064960 | Msa1108960 | 0.810451 | 1.145288e-50 | -8.615850e-47 |
Msa0089540 | Msa1108960 | 0.816982 | 4.175882e-52 | -8.615850e-47 |
Msa0099090 | Msa1108960 | -0.804267 | 2.345354e-49 | -8.615850e-47 |
Msa0110240 | Msa1108960 | 0.820758 | 5.790655e-53 | -8.615850e-47 |
Msa0111000 | Msa1108960 | -0.820553 | 6.454366e-53 | -8.615850e-47 |
Msa0622800 | Msa1108960 | -0.805074 | 1.590871e-49 | -8.615850e-47 |
Msa0625550 | Msa1108960 | -0.807938 | 3.958279e-50 | -8.615850e-47 |
Msa0654500 | Msa1108960 | -0.832196 | 1.084964e-55 | -8.615850e-47 |
Msa0656570 | Msa1108960 | -0.809356 | 1.970881e-50 | -8.615850e-47 |
Msa0674680 | Msa1108960 | -0.822579 | 2.196586e-53 | -8.615850e-47 |
Msa0685390 | Msa1108960 | -0.836679 | 8.125929e-57 | -8.615850e-47 |
Msa0688880 | Msa1108960 | -0.800170 | 1.634468e-48 | -8.615850e-47 |
Msa0708840 | Msa1108960 | -0.831028 | 2.105354e-55 | -8.615850e-47 |
Msa0714230 | Msa1108960 | -0.813480 | 2.506346e-51 | -8.615850e-47 |
Msa0742690 | Msa1108960 | -0.839359 | 1.661388e-57 | -8.615850e-47 |
Msa0768240 | Msa1108960 | -0.822943 | 1.807056e-53 | -8.615850e-47 |
Msa0779830 | Msa1108960 | -0.824555 | 7.575121e-54 | -8.615850e-47 |
Msa0814350 | Msa1108960 | 0.810520 | 1.106653e-50 | -8.615850e-47 |
Msa0814660 | Msa1108960 | 0.810253 | 1.263669e-50 | -8.615850e-47 |
Msa0827560 | Msa1108960 | -0.838026 | 3.671135e-57 | -8.615850e-47 |
Msa0828350 | Msa1108960 | 0.803758 | 2.992372e-49 | -8.615850e-47 |
Msa0829770 | Msa1108960 | -0.816326 | 5.858442e-52 | -8.615850e-47 |
Msa0127910 | Msa1108960 | -0.805112 | 1.562431e-49 | -8.615850e-47 |
Msa0139280 | Msa1108960 | -0.821210 | 4.557371e-53 | -8.615850e-47 |
Msa0156530 | Msa1108960 | 0.805570 | 1.252254e-49 | -8.615850e-47 |
Msa0192890 | Msa1108960 | 0.851057 | 1.137296e-60 | -8.615850e-47 |
Msa0228360 | Msa1108960 | -0.809608 | 1.739713e-50 | -8.615850e-47 |
Msa0232660 | Msa1108960 | -0.816530 | 5.273115e-52 | -8.615850e-47 |
Msa0238140 | Msa1108960 | 0.810269 | 1.253355e-50 | -8.615850e-47 |
Msa0370350 | Msa1108960 | -0.800387 | 1.475811e-48 | -8.615850e-47 |
Msa0372100 | Msa1108960 | 0.814915 | 1.207829e-51 | -8.615850e-47 |
Msa0378620 | Msa1108960 | -0.805806 | 1.117618e-49 | -8.615850e-47 |
Msa0389570 | Msa1108960 | -0.815360 | 9.622155e-52 | -8.615850e-47 |
Msa0390590 | Msa1108960 | -0.807007 | 6.236886e-50 | -8.615850e-47 |
Msa0432260 | Msa1108960 | -0.805270 | 1.447367e-49 | -8.615850e-47 |
Msa0476730 | Msa1108960 | -0.811186 | 7.940484e-51 | -8.615850e-47 |
Msa1016450 | Msa1108960 | -0.819372 | 1.202188e-52 | -8.615850e-47 |
Msa1026710 | Msa1108960 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
Msa1026970 | Msa1108960 | 0.807015 | 6.213967e-50 | -8.615850e-47 |
Msa1039150 | Msa1108960 | -0.805755 | 1.145187e-49 | -8.615850e-47 |
Msa1057940 | Msa1108960 | -0.812469 | 4.174261e-51 | -8.615850e-47 |
Msa1067040 | Msa1108960 | 0.849200 | 3.766283e-60 | -8.615850e-47 |
Msa1078210 | Msa1108960 | -0.802289 | 6.020321e-49 | -8.615850e-47 |
Msa1078590 | Msa1108960 | -0.801278 | 9.710241e-49 | -8.615850e-47 |
Msa1083660 | Msa1108960 | -0.805496 | 1.298163e-49 | -8.615850e-47 |
Msa1093190 | Msa1108960 | -0.802242 | 6.155501e-49 | -8.615850e-47 |
Msa1104020 | Msa1108960 | -0.806822 | 6.825101e-50 | -8.615850e-47 |
Msa0258280 | Msa1108960 | -0.831053 | 2.076111e-55 | -8.615850e-47 |
Msa0261020 | Msa1108960 | -0.802549 | 5.322362e-49 | -8.615850e-47 |
Msa0294200 | Msa1108960 | 0.810328 | 1.217182e-50 | -8.615850e-47 |
Msa0297270 | Msa1108960 | -0.816661 | 4.928938e-52 | -8.615850e-47 |
Msa0297320 | Msa1108960 | -0.805335 | 1.403210e-49 | -8.615850e-47 |
Msa0304350 | Msa1108960 | -0.809318 | 2.007532e-50 | -8.615850e-47 |
Msa0305910 | Msa1108960 | -0.808055 | 3.738196e-50 | -8.615850e-47 |
Msa0313680 | Msa1108960 | 0.816537 | 5.253658e-52 | -8.615850e-47 |
Msa0336550 | Msa1108960 | -0.804394 | 2.205815e-49 | -8.615850e-47 |
Msa0340830 | Msa1108960 | -0.811830 | 5.753685e-51 | -8.615850e-47 |
Msa1108960 | Msa1112210 | -0.806025 | 1.005110e-49 | -8.615850e-47 |
Msa1108960 | Msa1136770 | -0.802150 | 6.429401e-49 | -8.615850e-47 |
Msa1108960 | Msa1152860 | 0.830617 | 2.655157e-55 | -8.615850e-47 |
Msa1108960 | Msa1154310 | 0.813403 | 2.605791e-51 | -8.615850e-47 |
Msa1108960 | Msa1182530 | -0.831996 | 1.216212e-55 | -8.615850e-47 |
Msa1108960 | Msa1191530 | -0.804782 | 1.831248e-49 | -8.615850e-47 |
Msa1108960 | Msa1194480 | -0.806138 | 9.514112e-50 | -8.615850e-47 |
Msa1108960 | Msa1197820 | 0.807405 | 5.136072e-50 | -8.615850e-47 |
Msa1108960 | Msa1200360 | 0.821092 | 4.852854e-53 | -8.615850e-47 |
Msa1108960 | Msa1235060 | -0.820205 | 7.758437e-53 | -8.615850e-47 |
Msa1108960 | Msa1251500 | 0.811330 | 7.388390e-51 | -8.615850e-47 |
Msa1108960 | Msa1263370 | 0.803409 | 3.534189e-49 | -8.615850e-47 |
Msa1108960 | Msa1290090 | -0.817833 | 2.685566e-52 | -8.615850e-47 |
Msa1108960 | Msa1292140 | 0.803542 | 3.316851e-49 | -8.615850e-47 |
Msa1108960 | Msa1320660 | -0.823529 | 1.319098e-53 | -8.615850e-47 |
Msa1108960 | Msa1334000 | 0.800362 | 1.493315e-48 | -8.615850e-47 |
Msa1108960 | Msa1361580 | -0.806279 | 8.885096e-50 | -8.615850e-47 |
Msa1108960 | Msa1362520 | 0.809193 | 2.135374e-50 | -8.615850e-47 |
Msa1108960 | Msa1371540 | -0.800428 | 1.448178e-48 | -8.615850e-47 |
Msa1108960 | Msa1374210 | -0.807026 | 6.179744e-50 | -8.615850e-47 |
Msa1108960 | Msa1375640 | 0.850310 | 1.844744e-60 | -8.615850e-47 |
Msa1108960 | Msa1376520 | 0.841010 | 6.157600e-58 | -8.615850e-47 |
Msa1108960 | Msa1381300 | -0.809005 | 2.343449e-50 | -8.615850e-47 |
Msa1108960 | Msa1387100 | -0.819089 | 1.394603e-52 | -8.615850e-47 |
Msa1108960 | Msa1392570 | -0.822083 | 2.863861e-53 | -8.615850e-47 |
Msa1108960 | Msa1398150 | -0.803167 | 3.966730e-49 | -8.615850e-47 |
Msa1108960 | Msa1426690 | -0.830273 | 3.222357e-55 | -8.615850e-47 |
Msa1108960 | Msa1429190 | 0.847677 | 9.937074e-60 | -8.615850e-47 |
Msa1108960 | Msa1433060 | -0.833235 | 5.990904e-56 | -8.615850e-47 |
Msa1108960 | Msa1450710 | 0.922691 | 7.074440e-89 | -8.615850e-47 |
Msa1108960 | Msa1451200 | -0.802551 | 5.316750e-49 | -8.615850e-47 |
Msa1108960 | Msa1464470 | -0.805276 | 1.443571e-49 | -8.615850e-47 |
Msa0483090 | Msa1108960 | -0.822173 | 2.728514e-53 | -8.615850e-47 |
Msa0483410 | Msa1108960 | -0.807429 | 5.076788e-50 | -8.615850e-47 |
Msa0514540 | Msa1108960 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
Msa0522810 | Msa1108960 | -0.809838 | 1.552769e-50 | -8.615850e-47 |
Msa0538650 | Msa1108960 | 0.819134 | 1.361863e-52 | -8.615850e-47 |
Msa0559440 | Msa1108960 | -0.825919 | 3.604545e-54 | -8.615850e-47 |
Msa0559640 | Msa1108960 | -0.834878 | 2.323645e-56 | -8.615850e-47 |
Msa0575950 | Msa1108960 | 0.808564 | 2.911321e-50 | -8.615850e-47 |
Msa0577960 | Msa1108960 | -0.806211 | 9.183067e-50 | -8.615850e-47 |
Msa0847140 | Msa1108960 | 0.826101 | 3.262708e-54 | -8.615850e-47 |
Msa0862750 | Msa1108960 | -0.823954 | 1.048492e-53 | -8.615850e-47 |
Msa0871420 | Msa1108960 | 0.817995 | 2.468680e-52 | -8.615850e-47 |
Msa0871620 | Msa1108960 | 0.800359 | 1.495812e-48 | -8.615850e-47 |
Msa0906100 | Msa1108960 | -0.810178 | 1.311331e-50 | -8.615850e-47 |
Msa0921860 | Msa1108960 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
Msa0936630 | Msa1108960 | 0.819459 | 1.148749e-52 | -8.615850e-47 |
Msa0947420 | Msa1108960 | 0.808602 | 2.857328e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1108960 | MtrunA17_Chr7g0242961 | 97.347 | 603 | 16 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1223 |
Msa1108960 | MtrunA17_Chr7g0242981 | 89.091 | 605 | 48 | 3 | 1 | 603 | 1 | 589 | 0.0 | 1096 |
Msa1108960 | MtrunA17_Chr4g0007071 | 85.502 | 607 | 84 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1068 |
Msa1108960 | MtrunA17_Chr5g0420011 | 85.173 | 607 | 86 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1065 |
Msa1108960 | MtrunA17_Chr2g0283471 | 81.250 | 576 | 104 | 1 | 28 | 603 | 11 | 582 | 0.0 | 987 |
Msa1108960 | MtrunA17_Chr2g0279461 | 59.109 | 247 | 67 | 2 | 10 | 228 | 25 | 265 | 1.76e-97 | 298 |
Msa1108960 | MtrunA17_Chr2g0279471 | 70.690 | 116 | 34 | 0 | 485 | 600 | 17 | 132 | 1.91e-52 | 176 |
Msa1108960 | MtrunA17_Chr3g0132201 | 24.070 | 511 | 338 | 18 | 47 | 531 | 84 | 570 | 5.75e-18 | 87.8 |
Msa1108960 | MtrunA17_Chr2g0281881 | 22.612 | 513 | 343 | 16 | 47 | 531 | 88 | 574 | 1.42e-15 | 80.1 |
Msa1108960 | MtrunA17_Chr2g0290681 | 23.248 | 585 | 365 | 21 | 26 | 558 | 38 | 590 | 5.28e-15 | 78.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1108960 | AT4G33070.1 | 84.893 | 609 | 84 | 2 | 1 | 603 | 1 | 607 | 0.0 | 1070 |
Msa1108960 | AT5G54960.1 | 83.744 | 609 | 91 | 3 | 1 | 603 | 1 | 607 | 0.0 | 1066 |
Msa1108960 | AT5G01320.1 | 83.113 | 604 | 100 | 2 | 1 | 603 | 1 | 603 | 0.0 | 1053 |
Msa1108960 | AT5G01330.1 | 82.215 | 596 | 102 | 1 | 8 | 603 | 1 | 592 | 0.0 | 1025 |
Msa1108960 | AT5G17380.1 | 24.351 | 501 | 309 | 19 | 47 | 509 | 18 | 486 | 5.18e-18 | 88.2 |
Msa1108960 | AT3G48560.1 | 22.417 | 513 | 344 | 15 | 47 | 531 | 103 | 589 | 2.51e-13 | 73.6 |
Find 188 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCATTTCATTGGAACTTAT+TGG | 0.122987 | 7_3:+52259616 | Msa1108960:CDS |
TCAGACCGTTACTTGCTTTC+AGG | 0.162001 | 7_3:+52257968 | Msa1108960:CDS |
CCATTTCATTGGAACTTATT+GGG | 0.218907 | 7_3:+52259617 | Msa1108960:CDS |
GGACCGAATTCTAATGATTA+TGG | 0.227678 | 7_3:+52257882 | Msa1108960:CDS |
CGGACAATGGCACATCTAAA+AGG | 0.233166 | 7_3:-52260881 | None:intergenic |
TACTTGGGAGCGAGTGAAAA+AGG | 0.254142 | 7_3:-52259031 | None:intergenic |
CATTGGTGATGGAAGCTTCC+AGG | 0.257014 | 7_3:+52260250 | Msa1108960:CDS |
TCTGAAGTTTACTGAGGATT+TGG | 0.261297 | 7_3:-52260801 | None:intergenic |
AGGGGTTATTATATACTAAA+AGG | 0.265507 | 7_3:-52257322 | None:intergenic |
AAACATAAGCTATCTTTCTT+TGG | 0.266263 | 7_3:-52260693 | None:intergenic |
CTGAAGTTTACTGAGGATTT+GGG | 0.267884 | 7_3:-52260800 | None:intergenic |
TTTGATGGATATTTAAAGTA+TGG | 0.270139 | 7_3:-52257411 | None:intergenic |
TTAACTCTCAAAGGTTCTTT+TGG | 0.273563 | 7_3:-52259933 | None:intergenic |
GTCAGTCTATTGTTGTTATA+TGG | 0.277326 | 7_3:+52260824 | Msa1108960:three_prime_UTR |
CCCAATAAGTTCCAATGAAA+TGG | 0.289567 | 7_3:-52259617 | None:intergenic |
ATTCAGTCACTTGAGATAAA+TGG | 0.298734 | 7_3:+52260973 | Msa1108960:three_prime_UTR |
GATCGGGTTGTGGTTGCTAA+TGG | 0.314935 | 7_3:+52259780 | Msa1108960:CDS |
GCTTTCGCCACCCTCAGTTT+AGG | 0.339876 | 7_3:-52259504 | None:intergenic |
TTTGTGGTTTAACGTGGAAA+TGG | 0.344615 | 7_3:-52257357 | None:intergenic |
AGTTGCTTGAGTGGGGTTCC+AGG | 0.345377 | 7_3:+52260754 | Msa1108960:CDS |
CAAATGCAATATGGTTCAAT+TGG | 0.346194 | 7_3:+52260164 | Msa1108960:CDS |
AGGATTCTTCATCATACTAT+TGG | 0.352361 | 7_3:+52257912 | Msa1108960:CDS |
GTTGCTAATGGACCTGCATT+TGG | 0.356868 | 7_3:+52259792 | Msa1108960:CDS |
AACAAAATGTCCACAATGTT+AGG | 0.362479 | 7_3:+52257465 | Msa1108960:exon |
CAAGCAATCACTCGCTTCTC+GGG | 0.364950 | 7_3:-52260227 | None:intergenic |
TATGAGTTTCAAATGCAATA+TGG | 0.365373 | 7_3:+52260155 | Msa1108960:CDS |
ATGAAATGGGGATGGTGCTC+AGG | 0.369145 | 7_3:-52259603 | None:intergenic |
CATGAAACGACGTCGTTGTT+TGG | 0.370477 | 7_3:-52257510 | None:intergenic |
CAGCCAATGCTTATATAAAC+AGG | 0.374707 | 7_3:-52258962 | None:intergenic |
GCTGATGCATACTTGTTTGC+CGG | 0.375814 | 7_3:+52259681 | Msa1108960:CDS |
GTGTTGTTACGTTCACTGTT+GGG | 0.380795 | 7_3:+52257790 | Msa1108960:CDS |
CAGTTCTTGATAACATTGTA+TGG | 0.391023 | 7_3:-52260473 | None:intergenic |
CCAATAAGTTCCAATGAAAT+GGG | 0.391316 | 7_3:-52259616 | None:intergenic |
TTGCCGCTTATTTGTATTGT+TGG | 0.393601 | 7_3:+52257858 | Msa1108960:CDS |
GAGCACCATCCCCATTTCAT+TGG | 0.394834 | 7_3:+52259606 | Msa1108960:CDS |
GCAAGCAATCACTCGCTTCT+CGG | 0.396937 | 7_3:-52260228 | None:intergenic |
CTAATGATTATGGGACTAGT+AGG | 0.404499 | 7_3:+52257892 | Msa1108960:CDS |
GAAGCAATTGCAACAGCAAC+AGG | 0.414187 | 7_3:+52260669 | Msa1108960:CDS |
TTGAAATTGCCCGAGGGATG+TGG | 0.415847 | 7_3:+52260044 | Msa1108960:CDS |
GACGCTTCGAAAGTGCCTTT+AGG | 0.416508 | 7_3:-52259836 | None:intergenic |
GTCCCATAATCATTAGAATT+CGG | 0.422032 | 7_3:-52257885 | None:intergenic |
TTTAATGACTACAGCTCTGT+TGG | 0.425890 | 7_3:+52259711 | Msa1108960:CDS |
GGAAATGGGAAGAGACTAAG+AGG | 0.431478 | 7_3:-52257342 | None:intergenic |
GGGGTTATTATATACTAAAA+GGG | 0.433558 | 7_3:-52257321 | None:intergenic |
CAGGAGGCGATCGCGGTGGC+TGG | 0.435574 | 7_3:-52257564 | None:intergenic |
GACCGAATTCTAATGATTAT+GGG | 0.436897 | 7_3:+52257883 | Msa1108960:CDS |
GGGTTATTATATACTAAAAG+GGG | 0.441988 | 7_3:-52257320 | None:intergenic |
TTGTGGTTTAACGTGGAAAT+GGG | 0.442454 | 7_3:-52257356 | None:intergenic |
CATGGTATCTTCTTCAATAC+AGG | 0.443052 | 7_3:+52257217 | None:intergenic |
ACCGACGTCTTCTCCGTTCC+CGG | 0.443261 | 7_3:+52257639 | Msa1108960:CDS |
CTCAACTCTTGACTAAAATC+AGG | 0.446683 | 7_3:-52257939 | None:intergenic |
CATACAATGTTATCAAGAAC+TGG | 0.450936 | 7_3:+52260474 | Msa1108960:CDS |
GAGTGTGAGGTTGAAGTCTC+CGG | 0.455911 | 7_3:-52257658 | None:intergenic |
ATTGTTTATCAAGAAGATGA+TGG | 0.455998 | 7_3:-52260414 | None:intergenic |
AGGCGATCGCGGTGGCTGGT+TGG | 0.460812 | 7_3:-52257560 | None:intergenic |
ATCAAAATGCATCCAAATGC+AGG | 0.464273 | 7_3:-52259804 | None:intergenic |
CATTGAAGTGATTGTTCACA+AGG | 0.466013 | 7_3:+52260716 | Msa1108960:CDS |
TGTGTTGTTACGTTCACTGT+TGG | 0.474626 | 7_3:+52257789 | Msa1108960:CDS |
CAATCATTGTGCAGCCCGAT+CGG | 0.474852 | 7_3:+52259763 | Msa1108960:CDS |
TGGTCTGTTGGTGCAACTCT+TGG | 0.476946 | 7_3:+52260188 | Msa1108960:CDS |
CCGTGATGCCATCAGCTAAA+GGG | 0.477384 | 7_3:+52259574 | Msa1108960:CDS |
CATTTCATTGGAACTTATTG+GGG | 0.478426 | 7_3:+52259618 | Msa1108960:CDS |
TTTGATGAAGGATTTCCTAA+AGG | 0.483996 | 7_3:+52259821 | Msa1108960:CDS |
CCGCTTATTTGTATTGTTGG+TGG | 0.484728 | 7_3:+52257861 | Msa1108960:CDS |
GGTTATTATATACTAAAAGG+GGG | 0.485038 | 7_3:-52257319 | None:intergenic |
TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 7_3:+52260168 | Msa1108960:CDS |
TTAATGACTACAGCTCTGTT+GGG | 0.491232 | 7_3:+52259712 | Msa1108960:CDS |
GTTATTATATACTAAAAGGG+GGG | 0.491386 | 7_3:-52257318 | None:intergenic |
ACAACATCTGTTGTATATGT+TGG | 0.492054 | 7_3:-52259965 | None:intergenic |
GACAGGATCACGACTGAAAG+TGG | 0.492188 | 7_3:-52259008 | None:intergenic |
CGACCATCTCGTCAATGAAC+CGG | 0.492546 | 7_3:+52257683 | Msa1108960:CDS |
AATCATTGTGCAGCCCGATC+GGG | 0.492725 | 7_3:+52259764 | Msa1108960:CDS |
AGTGTTCTTAATGCTATAGC+TGG | 0.494975 | 7_3:+52257819 | Msa1108960:CDS |
GCCGTGATGCCATCAGCTAA+AGG | 0.496857 | 7_3:+52259573 | Msa1108960:CDS |
GCAGTAAAACCTGTGCTAGT+AGG | 0.498681 | 7_3:+52259477 | Msa1108960:CDS |
GAACACTTACCCACATCCCT+CGG | 0.502879 | 7_3:-52260054 | None:intergenic |
ATCATGAATTTCAACCTCAA+TGG | 0.506430 | 7_3:-52260447 | None:intergenic |
ACTGCTGTAATTGCTGAGAC+AGG | 0.507925 | 7_3:+52259996 | Msa1108960:CDS |
AGCATTGGCTGTAACTTGCC+TGG | 0.508186 | 7_3:+52258974 | Msa1108960:CDS |
AGACGTCGGTGACGCCGACT+TGG | 0.509266 | 7_3:-52257626 | None:intergenic |
TTGCTGAGACAGGGGACTCA+TGG | 0.509451 | 7_3:+52260006 | Msa1108960:CDS |
CATAGGATATTTGTCCCAGA+TGG | 0.511574 | 7_3:+52259891 | Msa1108960:CDS |
TGTGCAGCCCGATCGGGTTG+TGG | 0.514001 | 7_3:+52259770 | Msa1108960:CDS |
GTTGCTTGAGTGGGGTTCCA+GGG | 0.514905 | 7_3:+52260755 | Msa1108960:CDS |
GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 7_3:+52260176 | Msa1108960:CDS |
TTAGCAACCACAACCCGATC+GGG | 0.517431 | 7_3:-52259777 | None:intergenic |
AAGCCTGTTTATATAAGCAT+TGG | 0.517974 | 7_3:+52258959 | Msa1108960:CDS |
TTATTATATACTAAAAGGGG+GGG | 0.518709 | 7_3:-52257317 | None:intergenic |
ATTGAGGTTGAAATTCATGA+TGG | 0.521307 | 7_3:+52260449 | Msa1108960:CDS |
TTAGGACCACCTACTAGCAC+AGG | 0.521701 | 7_3:-52259486 | None:intergenic |
AACACTTACCCACATCCCTC+GGG | 0.524155 | 7_3:-52260053 | None:intergenic |
AACATAACATTAACTCTCAA+AGG | 0.524430 | 7_3:-52259942 | None:intergenic |
TTATTGGGGTGCTGTGAGTA+CGG | 0.525149 | 7_3:+52259632 | Msa1108960:CDS |
CCATCAATAAAAGTAAATTC+CGG | 0.529435 | 7_3:-52260901 | None:intergenic |
GGACTAGTCGGCGTGCGAGA+TGG | 0.529848 | 7_3:-52257605 | None:intergenic |
TGTTGTTACGTTCACTGTTG+GGG | 0.530989 | 7_3:+52257791 | Msa1108960:CDS |
GTTTAGTTTGTGGTTTAACG+TGG | 0.531113 | 7_3:-52257363 | None:intergenic |
GGACAATGGCACATCTAAAA+GGG | 0.532644 | 7_3:-52260880 | None:intergenic |
AAGCAAAGAGTTGCTTGAGT+GGG | 0.534030 | 7_3:+52260746 | Msa1108960:CDS |
CATCTGGGACAAATATCCTA+TGG | 0.541696 | 7_3:-52259890 | None:intergenic |
ATAGTGATGGAATGGAAAGT+TGG | 0.544516 | 7_3:-52257276 | None:intergenic |
TATGCTCGGTCACGTGGTGT+CGG | 0.546337 | 7_3:+52257762 | Msa1108960:CDS |
TTGATGAAAAGTTTAGTTTG+TGG | 0.548420 | 7_3:-52257373 | None:intergenic |
GTAAGACAGTGGGAGGTACA+TGG | 0.550366 | 7_3:-52257248 | None:intergenic |
ATCATCTTCTTGATAAACAA+TGG | 0.550596 | 7_3:+52260416 | Msa1108960:CDS |
AGTGTGAGGTTGAAGTCTCC+GGG | 0.552102 | 7_3:-52257657 | None:intergenic |
GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 7_3:+52260239 | Msa1108960:CDS |
GCGGCCGAGTGTAGCGTCGC+AGG | 0.553256 | 7_3:-52257583 | None:intergenic |
ATAGGCTGTGGTGAATAACT+TGG | 0.556113 | 7_3:+52258883 | Msa1108960:intron |
AGTTGGTAAGAGTAAGACAG+TGG | 0.558764 | 7_3:-52257259 | None:intergenic |
GCCTCCTGCGACGCTACACT+CGG | 0.559561 | 7_3:+52257579 | Msa1108960:CDS |
TGTTGTAACGAGCTGAATGC+TGG | 0.559989 | 7_3:+52257723 | Msa1108960:CDS |
ACTTCTTCTCAAGAAAGAGA+AGG | 0.560019 | 7_3:+52259740 | Msa1108960:CDS |
TGCTTTACAGGTAACTGCAC+AGG | 0.560389 | 7_3:+52260358 | Msa1108960:intron |
TGAAGTTTACTGAGGATTTG+GGG | 0.560721 | 7_3:-52260799 | None:intergenic |
AGACACTGTTACTTAGTCCC+TGG | 0.561790 | 7_3:+52261099 | Msa1108960:three_prime_UTR |
TGAAATTGCCCGAGGGATGT+GGG | 0.564901 | 7_3:+52260045 | Msa1108960:CDS |
GAAATGAGATAGTGATGGAA+TGG | 0.565338 | 7_3:-52257284 | None:intergenic |
TGCTGTAATTGCTGAGACAG+GGG | 0.567658 | 7_3:+52259998 | Msa1108960:CDS |
GCTATTGGCAGCAGAGACCC+TGG | 0.567903 | 7_3:-52260772 | None:intergenic |
TGAAATGGGGATGGTGCTCA+GGG | 0.568384 | 7_3:-52259602 | None:intergenic |
ATTAGCAACCACAACCCGAT+CGG | 0.569214 | 7_3:-52259778 | None:intergenic |
CAAGCAAAGAGTTGCTTGAG+TGG | 0.571229 | 7_3:+52260745 | Msa1108960:CDS |
GGGACCATCCCTTTAGCTGA+TGG | 0.572399 | 7_3:-52259582 | None:intergenic |
ATTGAGTAACCACATGGGGT+TGG | 0.573467 | 7_3:+52259416 | Msa1108960:CDS |
CCCTTTAGCTGATGGCATCA+CGG | 0.575591 | 7_3:-52259574 | None:intergenic |
CTGCTTATGAAAATTACCAT+AGG | 0.576792 | 7_3:+52259874 | Msa1108960:CDS |
GTTGGTAAGAGTAAGACAGT+GGG | 0.577661 | 7_3:-52257258 | None:intergenic |
GCTCCGGTTCATTGACGAGA+TGG | 0.581139 | 7_3:-52257686 | None:intergenic |
GATGCAATTCACAATGGTGA+AGG | 0.582372 | 7_3:+52260515 | Msa1108960:CDS |
CTGCTGTAATTGCTGAGACA+GGG | 0.583448 | 7_3:+52259997 | Msa1108960:CDS |
GACGGTTATGCTCGGTCACG+TGG | 0.584252 | 7_3:+52257756 | Msa1108960:CDS |
AAGCGAGTGATTGCTTGCAT+TGG | 0.587132 | 7_3:+52260233 | Msa1108960:CDS |
TCACGACTGAAAGTGGGATG+AGG | 0.587384 | 7_3:-52259001 | None:intergenic |
ATCAAGAACTGGAATTACAC+TGG | 0.587582 | 7_3:+52260485 | Msa1108960:CDS |
ATCTAAAGATCCTAACATTG+TGG | 0.588263 | 7_3:-52257475 | None:intergenic |
GAGGTTGAAGTCTCCGGGAA+CGG | 0.591569 | 7_3:-52257652 | None:intergenic |
CTAGTCGGCGTGCGAGATGG+CGG | 0.592292 | 7_3:-52257602 | None:intergenic |
ATGCGGCTGACGGTTATGCT+CGG | 0.592533 | 7_3:+52257748 | Msa1108960:CDS |
AAAGTGGGATGAGGAATACC+AGG | 0.593405 | 7_3:-52258992 | None:intergenic |
TAAAAGTAAATTCCGGACAA+TGG | 0.594466 | 7_3:-52260894 | None:intergenic |
GAACCGGAGCTGAACCTCAT+CGG | 0.594651 | 7_3:+52257699 | Msa1108960:CDS |
AGCAAAGAGTTGCTTGAGTG+GGG | 0.601698 | 7_3:+52260747 | Msa1108960:CDS |
CGAGCTGAATGCTGGTTATG+CGG | 0.602693 | 7_3:+52257731 | Msa1108960:CDS |
TTGTAGATTGAGTAACCACA+TGG | 0.603932 | 7_3:+52259410 | Msa1108960:intron |
ACAATGGTGAAGGAAAATGT+TGG | 0.606866 | 7_3:+52260525 | Msa1108960:CDS |
GTTCATTGACGAGATGGTCG+AGG | 0.607447 | 7_3:-52257680 | None:intergenic |
CAACCGATGAGGTTCAGCTC+CGG | 0.610804 | 7_3:-52257702 | None:intergenic |
AATGCTGGTTATGCGGCTGA+CGG | 0.614053 | 7_3:+52257738 | Msa1108960:CDS |
CGCATCAGCTAGTTCGACAA+AGG | 0.614351 | 7_3:-52259535 | None:intergenic |
AGGAAAATGTTGGACTACCA+AGG | 0.615414 | 7_3:+52260535 | Msa1108960:CDS |
GAAGTTTACTGAGGATTTGG+GGG | 0.615619 | 7_3:-52260798 | None:intergenic |
AAGTTCCAATGAAATGGGGA+TGG | 0.619469 | 7_3:-52259611 | None:intergenic |
AGCGTCGCAGGAGGCGATCG+CGG | 0.619577 | 7_3:-52257571 | None:intergenic |
GTAAAACCTGTGCTAGTAGG+TGG | 0.625266 | 7_3:+52259480 | Msa1108960:CDS |
GTCGAACTAGCTGATGCGAG+TGG | 0.630980 | 7_3:+52259540 | Msa1108960:CDS |
AGTAGGTGGTCCTAAACTGA+GGG | 0.633120 | 7_3:+52259494 | Msa1108960:CDS |
TGACGCCGACTTGGACTAGT+CGG | 0.644497 | 7_3:-52257617 | None:intergenic |
CTGCTGCTTCCAACCCCATG+TGG | 0.646622 | 7_3:-52259425 | None:intergenic |
GTTGTTACGTTCACTGTTGG+GGG | 0.649005 | 7_3:+52257792 | Msa1108960:CDS |
CGAGATGGTCGAGGAGTGTG+AGG | 0.649689 | 7_3:-52257671 | None:intergenic |
ATCTTCTTGATAAACAATGG+AGG | 0.653014 | 7_3:+52260419 | Msa1108960:CDS |
TAGTAGGTGGTCCTAAACTG+AGG | 0.653930 | 7_3:+52259493 | Msa1108960:CDS |
ACAGGATCACGACTGAAAGT+GGG | 0.654306 | 7_3:-52259007 | None:intergenic |
GGTAAGAGTAAGACAGTGGG+AGG | 0.655254 | 7_3:-52257255 | None:intergenic |
AAGCAATCACTCGCTTCTCG+GGG | 0.655548 | 7_3:-52260226 | None:intergenic |
AGGTGGTCCTAAACTGAGGG+TGG | 0.656562 | 7_3:+52259497 | Msa1108960:CDS |
CCACCAACAATACAAATAAG+CGG | 0.658046 | 7_3:-52257861 | None:intergenic |
GATGCCATCAGCTAAAGGGA+TGG | 0.659243 | 7_3:+52259578 | Msa1108960:CDS |
CAATAAGTTCCAATGAAATG+GGG | 0.661557 | 7_3:-52259615 | None:intergenic |
CTGTATTGAAGAAGATACCA+TGG | 0.662710 | 7_3:-52257216 | None:intergenic |
GGGGTTGGAAGCAGCAGTTG+AGG | 0.663030 | 7_3:+52259431 | Msa1108960:CDS |
GTAGATTGAGTAACCACATG+GGG | 0.665962 | 7_3:+52259412 | Msa1108960:intron |
GGTGGCTGGTTGGATCGAAG+AGG | 0.667849 | 7_3:-52257550 | None:intergenic |
ACCAACCTGAAAGCAAGTAA+CGG | 0.667976 | 7_3:-52257973 | None:intergenic |
GCTCGTTACAACAACCGATG+AGG | 0.668000 | 7_3:-52257713 | None:intergenic |
GTCGCAGGAGGCGATCGCGG+TGG | 0.669288 | 7_3:-52257568 | None:intergenic |
TTGTTACGTTCACTGTTGGG+GGG | 0.670836 | 7_3:+52257793 | Msa1108960:CDS |
GCACGCCGACTAGTCCAAGT+CGG | 0.675934 | 7_3:+52257612 | Msa1108960:CDS |
ACTGACTCTGAAGTTTACTG+AGG | 0.676440 | 7_3:-52260807 | None:intergenic |
TTGATTGATGCAATTCACAA+TGG | 0.677426 | 7_3:+52260509 | Msa1108960:CDS |
AAATGGGAAGAGACTAAGAG+GGG | 0.678158 | 7_3:-52257340 | None:intergenic |
CAATGGAGGATACACCATTG+AGG | 0.679792 | 7_3:+52260433 | Msa1108960:CDS |
TGTAGATTGAGTAACCACAT+GGG | 0.679957 | 7_3:+52259411 | Msa1108960:intron |
GAAATGGGAAGAGACTAAGA+GGG | 0.684252 | 7_3:-52257341 | None:intergenic |
GTTGTGAAATGAGATAGTGA+TGG | 0.693358 | 7_3:-52257289 | None:intergenic |
AGGATGTGTCGACAATGCTG+AGG | 0.731840 | 7_3:+52260378 | Msa1108960:CDS |
TCCGGGAACGGAGAAGACGT+CGG | 0.744759 | 7_3:-52257640 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTCATTTTTTTTTTGTTTT+TGG | + | chr7_3:52258005-52258024 | Msa1108960:intron | 15.0% |
!!! | GTCATTTTTTTTTTGTTTTT+GGG | + | chr7_3:52258006-52258025 | Msa1108960:intron | 15.0% |
!! | ATACATTACATATTTGAATT+GGG | + | chr7_3:52258679-52258698 | Msa1108960:intron | 15.0% |
!!! | TGTCATTTTTTTTTTGTTTT+TGG | + | chr7_3:52258005-52258024 | Msa1108960:intron | 15.0% |
!!! | GTCATTTTTTTTTTGTTTTT+GGG | + | chr7_3:52258006-52258025 | Msa1108960:intron | 15.0% |
!! | ATACATTACATATTTGAATT+GGG | + | chr7_3:52258679-52258698 | Msa1108960:intron | 15.0% |
!!! | TTTGATGGATATTTAAAGTA+TGG | - | chr7_3:52257414-52257433 | None:intergenic | 20.0% |
!!! | TTTTTGAAGTATAGTTTTGA+TGG | - | chr7_3:52257429-52257448 | None:intergenic | 20.0% |
!!! | GCTAAAATTACTACAATTTT+AGG | - | chr7_3:52258400-52258419 | None:intergenic | 20.0% |
!!! | AAAATTGTAGTAATTTTAGC+TGG | + | chr7_3:52258400-52258419 | Msa1108960:intron | 20.0% |
!! | TAACTTATACAAAATCACAT+TGG | - | chr7_3:52258592-52258611 | None:intergenic | 20.0% |
!! | CATACATTACATATTTGAAT+TGG | + | chr7_3:52258678-52258697 | Msa1108960:intron | 20.0% |
!! | TACATTACATATTTGAATTG+GGG | + | chr7_3:52258680-52258699 | Msa1108960:intron | 20.0% |
!! | TAAAATCATGGTAATTTAAG+CGG | + | chr7_3:52258756-52258775 | Msa1108960:intron | 20.0% |
!!! | ATGCTAGTTTTTGTTAAAAT+CGG | + | chr7_3:52259264-52259283 | Msa1108960:intron | 20.0% |
!!! | TCTCAATTTTTAGAATCAAA+TGG | - | chr7_3:52260859-52260878 | None:intergenic | 20.0% |
!!! | TTTGATGGATATTTAAAGTA+TGG | - | chr7_3:52257414-52257433 | None:intergenic | 20.0% |
!!! | TTTTTGAAGTATAGTTTTGA+TGG | - | chr7_3:52257429-52257448 | None:intergenic | 20.0% |
!!! | GCTAAAATTACTACAATTTT+AGG | - | chr7_3:52258400-52258419 | None:intergenic | 20.0% |
!!! | AAAATTGTAGTAATTTTAGC+TGG | + | chr7_3:52258400-52258419 | Msa1108960:intron | 20.0% |
!! | TAACTTATACAAAATCACAT+TGG | - | chr7_3:52258592-52258611 | None:intergenic | 20.0% |
!! | CATACATTACATATTTGAAT+TGG | + | chr7_3:52258678-52258697 | Msa1108960:intron | 20.0% |
!! | TACATTACATATTTGAATTG+GGG | + | chr7_3:52258680-52258699 | Msa1108960:intron | 20.0% |
!! | TAAAATCATGGTAATTTAAG+CGG | + | chr7_3:52258756-52258775 | Msa1108960:intron | 20.0% |
!!! | ATGCTAGTTTTTGTTAAAAT+CGG | + | chr7_3:52259264-52259283 | Msa1108960:intron | 20.0% |
!!! | TCTCAATTTTTAGAATCAAA+TGG | - | chr7_3:52260859-52260878 | None:intergenic | 20.0% |
! | TTATTATATACTAAAAGGGG+GGG | - | chr7_3:52257320-52257339 | None:intergenic | 25.0% |
! | GTTATTATATACTAAAAGGG+GGG | - | chr7_3:52257321-52257340 | None:intergenic | 25.0% |
! | GGTTATTATATACTAAAAGG+GGG | - | chr7_3:52257322-52257341 | None:intergenic | 25.0% |
! | GGGTTATTATATACTAAAAG+GGG | - | chr7_3:52257323-52257342 | None:intergenic | 25.0% |
! | GGGGTTATTATATACTAAAA+GGG | - | chr7_3:52257324-52257343 | None:intergenic | 25.0% |
! | AGGGGTTATTATATACTAAA+AGG | - | chr7_3:52257325-52257344 | None:intergenic | 25.0% |
!!! | TTGATGAAAAGTTTAGTTTG+TGG | - | chr7_3:52257376-52257395 | None:intergenic | 25.0% |
! | TCAAACATGTAGTATATGTT+TGG | - | chr7_3:52258321-52258340 | None:intergenic | 25.0% |
! | CATATACTACATGTTTGAAT+CGG | + | chr7_3:52258323-52258342 | Msa1108960:intron | 25.0% |
! | ATATACTACATGTTTGAATC+GGG | + | chr7_3:52258324-52258343 | Msa1108960:intron | 25.0% |
! | TCAAATATGTAATGTATGTC+TGG | - | chr7_3:52258676-52258695 | None:intergenic | 25.0% |
!! | GCTTAAATTACCATGATTTT+AGG | - | chr7_3:52258757-52258776 | None:intergenic | 25.0% |
! | AAAATCATGGTAATTTAAGC+GGG | + | chr7_3:52258757-52258776 | Msa1108960:intron | 25.0% |
! | AAATAGAGAAAGACTTACTT+GGG | - | chr7_3:52259049-52259068 | None:intergenic | 25.0% |
! | TTCAAATCATACAAAGAATC+CGG | + | chr7_3:52259116-52259135 | Msa1108960:intron | 25.0% |
!! | AAACTTTTCAATCTAACCAA+AGG | - | chr7_3:52259142-52259161 | None:intergenic | 25.0% |
!!! | TGCTAGTTTTTGTTAAAATC+GGG | + | chr7_3:52259265-52259284 | Msa1108960:intron | 25.0% |
! | TCATCAACATTTCCAATAAT+CGG | - | chr7_3:52259363-52259382 | None:intergenic | 25.0% |
! | AACATAACATTAACTCTCAA+AGG | - | chr7_3:52259945-52259964 | None:intergenic | 25.0% |
! | TATGAGTTTCAAATGCAATA+TGG | + | chr7_3:52260155-52260174 | Msa1108960:CDS | 25.0% |
! | ATTGTTTATCAAGAAGATGA+TGG | - | chr7_3:52260417-52260436 | None:intergenic | 25.0% |
! | ATCATCTTCTTGATAAACAA+TGG | + | chr7_3:52260416-52260435 | Msa1108960:CDS | 25.0% |
! | AAACATAAGCTATCTTTCTT+TGG | - | chr7_3:52260696-52260715 | None:intergenic | 25.0% |
! | CCATCAATAAAAGTAAATTC+CGG | - | chr7_3:52260904-52260923 | None:intergenic | 25.0% |
! | TTATTATATACTAAAAGGGG+GGG | - | chr7_3:52257320-52257339 | None:intergenic | 25.0% |
! | GTTATTATATACTAAAAGGG+GGG | - | chr7_3:52257321-52257340 | None:intergenic | 25.0% |
! | GGTTATTATATACTAAAAGG+GGG | - | chr7_3:52257322-52257341 | None:intergenic | 25.0% |
! | GGGTTATTATATACTAAAAG+GGG | - | chr7_3:52257323-52257342 | None:intergenic | 25.0% |
! | GGGGTTATTATATACTAAAA+GGG | - | chr7_3:52257324-52257343 | None:intergenic | 25.0% |
! | AGGGGTTATTATATACTAAA+AGG | - | chr7_3:52257325-52257344 | None:intergenic | 25.0% |
!!! | TTGATGAAAAGTTTAGTTTG+TGG | - | chr7_3:52257376-52257395 | None:intergenic | 25.0% |
! | TCAAACATGTAGTATATGTT+TGG | - | chr7_3:52258321-52258340 | None:intergenic | 25.0% |
! | CATATACTACATGTTTGAAT+CGG | + | chr7_3:52258323-52258342 | Msa1108960:intron | 25.0% |
! | ATATACTACATGTTTGAATC+GGG | + | chr7_3:52258324-52258343 | Msa1108960:intron | 25.0% |
! | TCAAATATGTAATGTATGTC+TGG | - | chr7_3:52258676-52258695 | None:intergenic | 25.0% |
!! | GCTTAAATTACCATGATTTT+AGG | - | chr7_3:52258757-52258776 | None:intergenic | 25.0% |
! | AAAATCATGGTAATTTAAGC+GGG | + | chr7_3:52258757-52258776 | Msa1108960:intron | 25.0% |
! | AAATAGAGAAAGACTTACTT+GGG | - | chr7_3:52259049-52259068 | None:intergenic | 25.0% |
! | TTCAAATCATACAAAGAATC+CGG | + | chr7_3:52259116-52259135 | Msa1108960:intron | 25.0% |
!! | AAACTTTTCAATCTAACCAA+AGG | - | chr7_3:52259142-52259161 | None:intergenic | 25.0% |
!!! | TGCTAGTTTTTGTTAAAATC+GGG | + | chr7_3:52259265-52259284 | Msa1108960:intron | 25.0% |
! | TCATCAACATTTCCAATAAT+CGG | - | chr7_3:52259363-52259382 | None:intergenic | 25.0% |
! | AACATAACATTAACTCTCAA+AGG | - | chr7_3:52259945-52259964 | None:intergenic | 25.0% |
! | TATGAGTTTCAAATGCAATA+TGG | + | chr7_3:52260155-52260174 | Msa1108960:CDS | 25.0% |
! | ATTGTTTATCAAGAAGATGA+TGG | - | chr7_3:52260417-52260436 | None:intergenic | 25.0% |
! | ATCATCTTCTTGATAAACAA+TGG | + | chr7_3:52260416-52260435 | Msa1108960:CDS | 25.0% |
! | AAACATAAGCTATCTTTCTT+TGG | - | chr7_3:52260696-52260715 | None:intergenic | 25.0% |
! | CCATCAATAAAAGTAAATTC+CGG | - | chr7_3:52260904-52260923 | None:intergenic | 25.0% |
AACAAAATGTCCACAATGTT+AGG | + | chr7_3:52257465-52257484 | Msa1108960:exon | 30.0% | |
ATCTAAAGATCCTAACATTG+TGG | - | chr7_3:52257478-52257497 | None:intergenic | 30.0% | |
GACCGAATTCTAATGATTAT+GGG | + | chr7_3:52257883-52257902 | Msa1108960:CDS | 30.0% | |
GTCCCATAATCATTAGAATT+CGG | - | chr7_3:52257888-52257907 | None:intergenic | 30.0% | |
AGGATTCTTCATCATACTAT+TGG | + | chr7_3:52257912-52257931 | Msa1108960:CDS | 30.0% | |
! | TAGCTTTTACAAAATCACAG+TGG | - | chr7_3:52258210-52258229 | None:intergenic | 30.0% |
!! | TTTTTGCTTTTGCGAAATCA+TGG | + | chr7_3:52258251-52258270 | Msa1108960:intron | 30.0% |
TATACTACATGTTTGAATCG+GGG | + | chr7_3:52258325-52258344 | Msa1108960:intron | 30.0% | |
TACACTTAGCTGTTGTAAAA+TGG | + | chr7_3:52258458-52258477 | Msa1108960:intron | 30.0% | |
ACACTTAGCTGTTGTAAAAT+GGG | + | chr7_3:52258459-52258478 | Msa1108960:intron | 30.0% | |
!! | ATTTTGCTTTTGCAAAACCA+TGG | + | chr7_3:52258616-52258635 | Msa1108960:intron | 30.0% |
TGCACTTAGTTGTTGTAAAA+TGG | + | chr7_3:52258823-52258842 | Msa1108960:intron | 30.0% | |
GCACTTAGTTGTTGTAAAAT+GGG | + | chr7_3:52258824-52258843 | Msa1108960:intron | 30.0% | |
!! | AGTTGTTGTAAAATGGGTTT+TGG | + | chr7_3:52258830-52258849 | Msa1108960:intron | 30.0% |
!! | TGGTGGTTTGATTTGATTAT+AGG | + | chr7_3:52258865-52258884 | Msa1108960:intron | 30.0% |
!! | TTTGATTTGATTATAGGCTG+TGG | + | chr7_3:52258871-52258890 | Msa1108960:intron | 30.0% |
AAGCCTGTTTATATAAGCAT+TGG | + | chr7_3:52258959-52258978 | Msa1108960:CDS | 30.0% | |
CAAATAGAGAAAGACTTACT+TGG | - | chr7_3:52259050-52259069 | None:intergenic | 30.0% | |
!!! | GCTAGTTTTTGTTAAAATCG+GGG | + | chr7_3:52259266-52259285 | Msa1108960:intron | 30.0% |
AAGTTTGGTAGAATCACATT+GGG | - | chr7_3:52259295-52259314 | None:intergenic | 30.0% | |
TAAGTTTGGTAGAATCACAT+TGG | - | chr7_3:52259296-52259315 | None:intergenic | 30.0% | |
CAAGTTAATAAGTGCATTTC+TGG | - | chr7_3:52259326-52259345 | None:intergenic | 30.0% | |
!! | TTATTAACTTGTGTGTGAAG+AGG | + | chr7_3:52259335-52259354 | Msa1108960:intron | 30.0% |
CAATAAGTTCCAATGAAATG+GGG | - | chr7_3:52259618-52259637 | None:intergenic | 30.0% | |
CCAATAAGTTCCAATGAAAT+GGG | - | chr7_3:52259619-52259638 | None:intergenic | 30.0% | |
CCATTTCATTGGAACTTATT+GGG | + | chr7_3:52259617-52259636 | Msa1108960:CDS | 30.0% | |
CATTTCATTGGAACTTATTG+GGG | + | chr7_3:52259618-52259637 | Msa1108960:CDS | 30.0% | |
GAGCTGTAGTCATTAAAAAT+GGG | - | chr7_3:52259708-52259727 | None:intergenic | 30.0% | |
AGAGCTGTAGTCATTAAAAA+TGG | - | chr7_3:52259709-52259728 | None:intergenic | 30.0% | |
!! | ATTTGGATGCATTTTGATGA+AGG | + | chr7_3:52259809-52259828 | Msa1108960:CDS | 30.0% |
TTTGATGAAGGATTTCCTAA+AGG | + | chr7_3:52259821-52259840 | Msa1108960:CDS | 30.0% | |
CTGCTTATGAAAATTACCAT+AGG | + | chr7_3:52259874-52259893 | Msa1108960:CDS | 30.0% | |
! | TTAACTCTCAAAGGTTCTTT+TGG | - | chr7_3:52259936-52259955 | None:intergenic | 30.0% |
ACAACATCTGTTGTATATGT+TGG | - | chr7_3:52259968-52259987 | None:intergenic | 30.0% | |
!! | TAGTGCTGATAAAATCTTGT+TGG | + | chr7_3:52260128-52260147 | Msa1108960:intron | 30.0% |
CAAATGCAATATGGTTCAAT+TGG | + | chr7_3:52260164-52260183 | Msa1108960:CDS | 30.0% | |
! | CTGTAAAGCATTTAAGAGAA+AGG | - | chr7_3:52260348-52260367 | None:intergenic | 30.0% |
CTTTCTCTTAAATGCTTTAC+AGG | + | chr7_3:52260346-52260365 | Msa1108960:intron | 30.0% | |
ATCTTCTTGATAAACAATGG+AGG | + | chr7_3:52260419-52260438 | Msa1108960:CDS | 30.0% | |
ATCATGAATTTCAACCTCAA+TGG | - | chr7_3:52260450-52260469 | None:intergenic | 30.0% | |
ATTGAGGTTGAAATTCATGA+TGG | + | chr7_3:52260449-52260468 | Msa1108960:CDS | 30.0% | |
! | CAGTTCTTGATAACATTGTA+TGG | - | chr7_3:52260476-52260495 | None:intergenic | 30.0% |
CATACAATGTTATCAAGAAC+TGG | + | chr7_3:52260474-52260493 | Msa1108960:CDS | 30.0% | |
TTGATTGATGCAATTCACAA+TGG | + | chr7_3:52260509-52260528 | Msa1108960:CDS | 30.0% | |
! | CTTGTTATAGAAGAAGTTTG+AGG | - | chr7_3:52260589-52260608 | None:intergenic | 30.0% |
! | GTCAGTCTATTGTTGTTATA+TGG | + | chr7_3:52260824-52260843 | Msa1108960:three_prime_UTR | 30.0% |
TAAAAGTAAATTCCGGACAA+TGG | - | chr7_3:52260897-52260916 | None:intergenic | 30.0% | |
!! | CCGGAATTTACTTTTATTGA+TGG | + | chr7_3:52260901-52260920 | Msa1108960:intron | 30.0% |
! | CTTTCTTGTTTATGCAAGTA+TGG | + | chr7_3:52260924-52260943 | Msa1108960:intron | 30.0% |
ATTCAGTCACTTGAGATAAA+TGG | + | chr7_3:52260973-52260992 | Msa1108960:three_prime_UTR | 30.0% | |
AACAAAATGTCCACAATGTT+AGG | + | chr7_3:52257465-52257484 | Msa1108960:exon | 30.0% | |
ATCTAAAGATCCTAACATTG+TGG | - | chr7_3:52257478-52257497 | None:intergenic | 30.0% | |
GACCGAATTCTAATGATTAT+GGG | + | chr7_3:52257883-52257902 | Msa1108960:CDS | 30.0% | |
GTCCCATAATCATTAGAATT+CGG | - | chr7_3:52257888-52257907 | None:intergenic | 30.0% | |
AGGATTCTTCATCATACTAT+TGG | + | chr7_3:52257912-52257931 | Msa1108960:CDS | 30.0% | |
! | TAGCTTTTACAAAATCACAG+TGG | - | chr7_3:52258210-52258229 | None:intergenic | 30.0% |
!! | TTTTTGCTTTTGCGAAATCA+TGG | + | chr7_3:52258251-52258270 | Msa1108960:intron | 30.0% |
TATACTACATGTTTGAATCG+GGG | + | chr7_3:52258325-52258344 | Msa1108960:intron | 30.0% | |
TACACTTAGCTGTTGTAAAA+TGG | + | chr7_3:52258458-52258477 | Msa1108960:intron | 30.0% | |
ACACTTAGCTGTTGTAAAAT+GGG | + | chr7_3:52258459-52258478 | Msa1108960:intron | 30.0% | |
!! | ATTTTGCTTTTGCAAAACCA+TGG | + | chr7_3:52258616-52258635 | Msa1108960:intron | 30.0% |
TGCACTTAGTTGTTGTAAAA+TGG | + | chr7_3:52258823-52258842 | Msa1108960:intron | 30.0% | |
GCACTTAGTTGTTGTAAAAT+GGG | + | chr7_3:52258824-52258843 | Msa1108960:intron | 30.0% | |
!! | AGTTGTTGTAAAATGGGTTT+TGG | + | chr7_3:52258830-52258849 | Msa1108960:intron | 30.0% |
!! | TGGTGGTTTGATTTGATTAT+AGG | + | chr7_3:52258865-52258884 | Msa1108960:intron | 30.0% |
!! | TTTGATTTGATTATAGGCTG+TGG | + | chr7_3:52258871-52258890 | Msa1108960:intron | 30.0% |
AAGCCTGTTTATATAAGCAT+TGG | + | chr7_3:52258959-52258978 | Msa1108960:CDS | 30.0% | |
CAAATAGAGAAAGACTTACT+TGG | - | chr7_3:52259050-52259069 | None:intergenic | 30.0% | |
!!! | GCTAGTTTTTGTTAAAATCG+GGG | + | chr7_3:52259266-52259285 | Msa1108960:intron | 30.0% |
AAGTTTGGTAGAATCACATT+GGG | - | chr7_3:52259295-52259314 | None:intergenic | 30.0% | |
TAAGTTTGGTAGAATCACAT+TGG | - | chr7_3:52259296-52259315 | None:intergenic | 30.0% | |
CAAGTTAATAAGTGCATTTC+TGG | - | chr7_3:52259326-52259345 | None:intergenic | 30.0% | |
!! | TTATTAACTTGTGTGTGAAG+AGG | + | chr7_3:52259335-52259354 | Msa1108960:intron | 30.0% |
CAATAAGTTCCAATGAAATG+GGG | - | chr7_3:52259618-52259637 | None:intergenic | 30.0% | |
CCAATAAGTTCCAATGAAAT+GGG | - | chr7_3:52259619-52259638 | None:intergenic | 30.0% | |
CCATTTCATTGGAACTTATT+GGG | + | chr7_3:52259617-52259636 | Msa1108960:CDS | 30.0% | |
CATTTCATTGGAACTTATTG+GGG | + | chr7_3:52259618-52259637 | Msa1108960:CDS | 30.0% | |
GAGCTGTAGTCATTAAAAAT+GGG | - | chr7_3:52259708-52259727 | None:intergenic | 30.0% | |
AGAGCTGTAGTCATTAAAAA+TGG | - | chr7_3:52259709-52259728 | None:intergenic | 30.0% | |
!! | ATTTGGATGCATTTTGATGA+AGG | + | chr7_3:52259809-52259828 | Msa1108960:CDS | 30.0% |
TTTGATGAAGGATTTCCTAA+AGG | + | chr7_3:52259821-52259840 | Msa1108960:CDS | 30.0% | |
CTGCTTATGAAAATTACCAT+AGG | + | chr7_3:52259874-52259893 | Msa1108960:CDS | 30.0% | |
! | TTAACTCTCAAAGGTTCTTT+TGG | - | chr7_3:52259936-52259955 | None:intergenic | 30.0% |
ACAACATCTGTTGTATATGT+TGG | - | chr7_3:52259968-52259987 | None:intergenic | 30.0% | |
!! | TAGTGCTGATAAAATCTTGT+TGG | + | chr7_3:52260128-52260147 | Msa1108960:intron | 30.0% |
CAAATGCAATATGGTTCAAT+TGG | + | chr7_3:52260164-52260183 | Msa1108960:CDS | 30.0% | |
! | CTGTAAAGCATTTAAGAGAA+AGG | - | chr7_3:52260348-52260367 | None:intergenic | 30.0% |
CTTTCTCTTAAATGCTTTAC+AGG | + | chr7_3:52260346-52260365 | Msa1108960:intron | 30.0% | |
ATCTTCTTGATAAACAATGG+AGG | + | chr7_3:52260419-52260438 | Msa1108960:CDS | 30.0% | |
ATCATGAATTTCAACCTCAA+TGG | - | chr7_3:52260450-52260469 | None:intergenic | 30.0% | |
ATTGAGGTTGAAATTCATGA+TGG | + | chr7_3:52260449-52260468 | Msa1108960:CDS | 30.0% | |
! | CAGTTCTTGATAACATTGTA+TGG | - | chr7_3:52260476-52260495 | None:intergenic | 30.0% |
CATACAATGTTATCAAGAAC+TGG | + | chr7_3:52260474-52260493 | Msa1108960:CDS | 30.0% | |
TTGATTGATGCAATTCACAA+TGG | + | chr7_3:52260509-52260528 | Msa1108960:CDS | 30.0% | |
! | CTTGTTATAGAAGAAGTTTG+AGG | - | chr7_3:52260589-52260608 | None:intergenic | 30.0% |
! | GTCAGTCTATTGTTGTTATA+TGG | + | chr7_3:52260824-52260843 | Msa1108960:three_prime_UTR | 30.0% |
TAAAAGTAAATTCCGGACAA+TGG | - | chr7_3:52260897-52260916 | None:intergenic | 30.0% | |
!! | CCGGAATTTACTTTTATTGA+TGG | + | chr7_3:52260901-52260920 | Msa1108960:intron | 30.0% |
! | CTTTCTTGTTTATGCAAGTA+TGG | + | chr7_3:52260924-52260943 | Msa1108960:intron | 30.0% |
ATTCAGTCACTTGAGATAAA+TGG | + | chr7_3:52260973-52260992 | Msa1108960:three_prime_UTR | 30.0% | |
! | ATAGTGATGGAATGGAAAGT+TGG | - | chr7_3:52257279-52257298 | None:intergenic | 35.0% |
! | GAAATGAGATAGTGATGGAA+TGG | - | chr7_3:52257287-52257306 | None:intergenic | 35.0% |
GTTGTGAAATGAGATAGTGA+TGG | - | chr7_3:52257292-52257311 | None:intergenic | 35.0% | |
TTGTGGTTTAACGTGGAAAT+GGG | - | chr7_3:52257359-52257378 | None:intergenic | 35.0% | |
TTTGTGGTTTAACGTGGAAA+TGG | - | chr7_3:52257360-52257379 | None:intergenic | 35.0% | |
!! | GTTTAGTTTGTGGTTTAACG+TGG | - | chr7_3:52257366-52257385 | None:intergenic | 35.0% |
AGTGTTCTTAATGCTATAGC+TGG | + | chr7_3:52257819-52257838 | Msa1108960:CDS | 35.0% | |
! | TTGCCGCTTATTTGTATTGT+TGG | + | chr7_3:52257858-52257877 | Msa1108960:CDS | 35.0% |
CCACCAACAATACAAATAAG+CGG | - | chr7_3:52257864-52257883 | None:intergenic | 35.0% | |
GGACCGAATTCTAATGATTA+TGG | + | chr7_3:52257882-52257901 | Msa1108960:CDS | 35.0% | |
! | CTAATGATTATGGGACTAGT+AGG | + | chr7_3:52257892-52257911 | Msa1108960:CDS | 35.0% |
CTCAACTCTTGACTAAAATC+AGG | - | chr7_3:52257942-52257961 | None:intergenic | 35.0% | |
!! | CTGATTTTAGTCAAGAGTTG+AGG | + | chr7_3:52257940-52257959 | Msa1108960:CDS | 35.0% |
CACTTAGCTGTTGTAAAATG+GGG | + | chr7_3:52258460-52258479 | Msa1108960:intron | 35.0% | |
AAACAAAGTCACTATGCATC+TGG | - | chr7_3:52258513-52258532 | None:intergenic | 35.0% | |
AGATGCATAGTGACTTTGTT+TGG | + | chr7_3:52258512-52258531 | Msa1108960:intron | 35.0% | |
! | ACTTTGTTTGGTATCACAGA+CGG | + | chr7_3:52258524-52258543 | Msa1108960:intron | 35.0% |
AGTACGTTGTCCTAAAATCA+TGG | + | chr7_3:52258744-52258763 | Msa1108960:intron | 35.0% | |
!!! | GGTTTTGGTGATTGTTTTGA+TGG | + | chr7_3:52258845-52258864 | Msa1108960:intron | 35.0% |
!!! | TTTGGTGATTGTTTTGATGG+TGG | + | chr7_3:52258848-52258867 | Msa1108960:intron | 35.0% |
CAGCCAATGCTTATATAAAC+AGG | - | chr7_3:52258965-52258984 | None:intergenic | 35.0% | |
! | TTTTCAATCTAACCAAAGGC+CGG | - | chr7_3:52259138-52259157 | None:intergenic | 35.0% |
! | CACCAAACTTGCTTTAAACA+CGG | + | chr7_3:52259163-52259182 | Msa1108960:intron | 35.0% |
TGTGATTCTACCAAACTTAC+TGG | + | chr7_3:52259297-52259316 | Msa1108960:intron | 35.0% | |
TTTCTGGATTCCAGTAAGTT+TGG | - | chr7_3:52259310-52259329 | None:intergenic | 35.0% | |
TTGTAGATTGAGTAACCACA+TGG | + | chr7_3:52259410-52259429 | Msa1108960:intron | 35.0% | |
TGTAGATTGAGTAACCACAT+GGG | + | chr7_3:52259411-52259430 | Msa1108960:intron | 35.0% | |
CCCATTTCATTGGAACTTAT+TGG | + | chr7_3:52259616-52259635 | Msa1108960:CDS | 35.0% | |
CCCAATAAGTTCCAATGAAA+TGG | - | chr7_3:52259620-52259639 | None:intergenic | 35.0% | |
GTAGTCATTAAAAATGGGAC+CGG | - | chr7_3:52259703-52259722 | None:intergenic | 35.0% | |
TTTAATGACTACAGCTCTGT+TGG | + | chr7_3:52259711-52259730 | Msa1108960:CDS | 35.0% | |
TTAATGACTACAGCTCTGTT+GGG | + | chr7_3:52259712-52259731 | Msa1108960:CDS | 35.0% | |
ACTTCTTCTCAAGAAAGAGA+AGG | + | chr7_3:52259740-52259759 | Msa1108960:CDS | 35.0% | |
ATCAAAATGCATCCAAATGC+AGG | - | chr7_3:52259807-52259826 | None:intergenic | 35.0% | |
! | ACTTCAAAGGTTTTCCATCT+GGG | - | chr7_3:52259908-52259927 | None:intergenic | 35.0% |
TCAAAAATTGAAATTGCCCG+AGG | + | chr7_3:52260037-52260056 | Msa1108960:CDS | 35.0% | |
CAAAAATTGAAATTGCCCGA+GGG | + | chr7_3:52260038-52260057 | Msa1108960:CDS | 35.0% | |
TGCAATATGGTTCAATTGGA+TGG | + | chr7_3:52260168-52260187 | Msa1108960:CDS | 35.0% | |
ATCAAGAACTGGAATTACAC+TGG | + | chr7_3:52260485-52260504 | Msa1108960:CDS | 35.0% | |
ACAATGGTGAAGGAAAATGT+TGG | + | chr7_3:52260525-52260544 | Msa1108960:CDS | 35.0% | |
TGAGTCGTTTGACATTGTTA+TGG | + | chr7_3:52260558-52260577 | Msa1108960:intron | 35.0% | |
TCTTCACAGAATACCTGAAA+AGG | - | chr7_3:52260639-52260658 | None:intergenic | 35.0% | |
!!! | TTTTCAGGTATTCTGTGAAG+AGG | + | chr7_3:52260638-52260657 | Msa1108960:intron | 35.0% |
CATTGAAGTGATTGTTCACA+AGG | + | chr7_3:52260716-52260735 | Msa1108960:CDS | 35.0% | |
TGAAGTTTACTGAGGATTTG+GGG | - | chr7_3:52260802-52260821 | None:intergenic | 35.0% | |
CTGAAGTTTACTGAGGATTT+GGG | - | chr7_3:52260803-52260822 | None:intergenic | 35.0% | |
! | TCTGAAGTTTACTGAGGATT+TGG | - | chr7_3:52260804-52260823 | None:intergenic | 35.0% |
! | ATAGTGATGGAATGGAAAGT+TGG | - | chr7_3:52257279-52257298 | None:intergenic | 35.0% |
! | GAAATGAGATAGTGATGGAA+TGG | - | chr7_3:52257287-52257306 | None:intergenic | 35.0% |
GTTGTGAAATGAGATAGTGA+TGG | - | chr7_3:52257292-52257311 | None:intergenic | 35.0% | |
TTGTGGTTTAACGTGGAAAT+GGG | - | chr7_3:52257359-52257378 | None:intergenic | 35.0% | |
TTTGTGGTTTAACGTGGAAA+TGG | - | chr7_3:52257360-52257379 | None:intergenic | 35.0% | |
!! | GTTTAGTTTGTGGTTTAACG+TGG | - | chr7_3:52257366-52257385 | None:intergenic | 35.0% |
AGTGTTCTTAATGCTATAGC+TGG | + | chr7_3:52257819-52257838 | Msa1108960:CDS | 35.0% | |
! | TTGCCGCTTATTTGTATTGT+TGG | + | chr7_3:52257858-52257877 | Msa1108960:CDS | 35.0% |
CCACCAACAATACAAATAAG+CGG | - | chr7_3:52257864-52257883 | None:intergenic | 35.0% | |
GGACCGAATTCTAATGATTA+TGG | + | chr7_3:52257882-52257901 | Msa1108960:CDS | 35.0% | |
! | CTAATGATTATGGGACTAGT+AGG | + | chr7_3:52257892-52257911 | Msa1108960:CDS | 35.0% |
CTCAACTCTTGACTAAAATC+AGG | - | chr7_3:52257942-52257961 | None:intergenic | 35.0% | |
!! | CTGATTTTAGTCAAGAGTTG+AGG | + | chr7_3:52257940-52257959 | Msa1108960:CDS | 35.0% |
CACTTAGCTGTTGTAAAATG+GGG | + | chr7_3:52258460-52258479 | Msa1108960:intron | 35.0% | |
AAACAAAGTCACTATGCATC+TGG | - | chr7_3:52258513-52258532 | None:intergenic | 35.0% | |
AGATGCATAGTGACTTTGTT+TGG | + | chr7_3:52258512-52258531 | Msa1108960:intron | 35.0% | |
! | ACTTTGTTTGGTATCACAGA+CGG | + | chr7_3:52258524-52258543 | Msa1108960:intron | 35.0% |
AGTACGTTGTCCTAAAATCA+TGG | + | chr7_3:52258744-52258763 | Msa1108960:intron | 35.0% | |
!!! | GGTTTTGGTGATTGTTTTGA+TGG | + | chr7_3:52258845-52258864 | Msa1108960:intron | 35.0% |
!!! | TTTGGTGATTGTTTTGATGG+TGG | + | chr7_3:52258848-52258867 | Msa1108960:intron | 35.0% |
CAGCCAATGCTTATATAAAC+AGG | - | chr7_3:52258965-52258984 | None:intergenic | 35.0% | |
! | TTTTCAATCTAACCAAAGGC+CGG | - | chr7_3:52259138-52259157 | None:intergenic | 35.0% |
! | CACCAAACTTGCTTTAAACA+CGG | + | chr7_3:52259163-52259182 | Msa1108960:intron | 35.0% |
TGTGATTCTACCAAACTTAC+TGG | + | chr7_3:52259297-52259316 | Msa1108960:intron | 35.0% | |
TTTCTGGATTCCAGTAAGTT+TGG | - | chr7_3:52259310-52259329 | None:intergenic | 35.0% | |
TTGTAGATTGAGTAACCACA+TGG | + | chr7_3:52259410-52259429 | Msa1108960:intron | 35.0% | |
TGTAGATTGAGTAACCACAT+GGG | + | chr7_3:52259411-52259430 | Msa1108960:intron | 35.0% | |
CCCATTTCATTGGAACTTAT+TGG | + | chr7_3:52259616-52259635 | Msa1108960:CDS | 35.0% | |
CCCAATAAGTTCCAATGAAA+TGG | - | chr7_3:52259620-52259639 | None:intergenic | 35.0% | |
GTAGTCATTAAAAATGGGAC+CGG | - | chr7_3:52259703-52259722 | None:intergenic | 35.0% | |
TTTAATGACTACAGCTCTGT+TGG | + | chr7_3:52259711-52259730 | Msa1108960:CDS | 35.0% | |
TTAATGACTACAGCTCTGTT+GGG | + | chr7_3:52259712-52259731 | Msa1108960:CDS | 35.0% | |
ACTTCTTCTCAAGAAAGAGA+AGG | + | chr7_3:52259740-52259759 | Msa1108960:CDS | 35.0% | |
ATCAAAATGCATCCAAATGC+AGG | - | chr7_3:52259807-52259826 | None:intergenic | 35.0% | |
! | ACTTCAAAGGTTTTCCATCT+GGG | - | chr7_3:52259908-52259927 | None:intergenic | 35.0% |
TCAAAAATTGAAATTGCCCG+AGG | + | chr7_3:52260037-52260056 | Msa1108960:CDS | 35.0% | |
CAAAAATTGAAATTGCCCGA+GGG | + | chr7_3:52260038-52260057 | Msa1108960:CDS | 35.0% | |
TGCAATATGGTTCAATTGGA+TGG | + | chr7_3:52260168-52260187 | Msa1108960:CDS | 35.0% | |
ATCAAGAACTGGAATTACAC+TGG | + | chr7_3:52260485-52260504 | Msa1108960:CDS | 35.0% | |
ACAATGGTGAAGGAAAATGT+TGG | + | chr7_3:52260525-52260544 | Msa1108960:CDS | 35.0% | |
TGAGTCGTTTGACATTGTTA+TGG | + | chr7_3:52260558-52260577 | Msa1108960:intron | 35.0% | |
TCTTCACAGAATACCTGAAA+AGG | - | chr7_3:52260639-52260658 | None:intergenic | 35.0% | |
!!! | TTTTCAGGTATTCTGTGAAG+AGG | + | chr7_3:52260638-52260657 | Msa1108960:intron | 35.0% |
CATTGAAGTGATTGTTCACA+AGG | + | chr7_3:52260716-52260735 | Msa1108960:CDS | 35.0% | |
TGAAGTTTACTGAGGATTTG+GGG | - | chr7_3:52260802-52260821 | None:intergenic | 35.0% | |
CTGAAGTTTACTGAGGATTT+GGG | - | chr7_3:52260803-52260822 | None:intergenic | 35.0% | |
! | TCTGAAGTTTACTGAGGATT+TGG | - | chr7_3:52260804-52260823 | None:intergenic | 35.0% |
! | GTTGGTAAGAGTAAGACAGT+GGG | - | chr7_3:52257261-52257280 | None:intergenic | 40.0% |
!! | AGTTGGTAAGAGTAAGACAG+TGG | - | chr7_3:52257262-52257281 | None:intergenic | 40.0% |
AAATGGGAAGAGACTAAGAG+GGG | - | chr7_3:52257343-52257362 | None:intergenic | 40.0% | |
GAAATGGGAAGAGACTAAGA+GGG | - | chr7_3:52257344-52257363 | None:intergenic | 40.0% | |
! | TGTGTTGTTACGTTCACTGT+TGG | + | chr7_3:52257789-52257808 | Msa1108960:CDS | 40.0% |
! | GTGTTGTTACGTTCACTGTT+GGG | + | chr7_3:52257790-52257809 | Msa1108960:CDS | 40.0% |
TGTTGTTACGTTCACTGTTG+GGG | + | chr7_3:52257791-52257810 | Msa1108960:CDS | 40.0% | |
CCGCTTATTTGTATTGTTGG+TGG | + | chr7_3:52257861-52257880 | Msa1108960:CDS | 40.0% | |
ACCAACCTGAAAGCAAGTAA+CGG | - | chr7_3:52257976-52257995 | None:intergenic | 40.0% | |
CAGTGAGTTTGACGAAATCA+TGG | - | chr7_3:52258293-52258312 | None:intergenic | 40.0% | |
TACACTGTCAAACTCACTAG+TGG | + | chr7_3:52258423-52258442 | Msa1108960:intron | 40.0% | |
CAGCTAAGTGTATGCATGTT+TGG | - | chr7_3:52258450-52258469 | None:intergenic | 40.0% | |
CAAAACCATGGTAAGCACTA+TGG | + | chr7_3:52258628-52258647 | Msa1108960:intron | 40.0% | |
TTTGAATTGGGGTGAGTTTG+AGG | + | chr7_3:52258691-52258710 | Msa1108960:intron | 40.0% | |
TAATTTAAGCGGGCACATTG+TGG | + | chr7_3:52258767-52258786 | Msa1108960:intron | 40.0% | |
CAACTAAGTGCATGCATGTT+TGG | - | chr7_3:52258815-52258834 | None:intergenic | 40.0% | |
ATAGGCTGTGGTGAATAACT+TGG | + | chr7_3:52258883-52258902 | Msa1108960:intron | 40.0% | |
AATTACTGGAAAGTGGGATG+AGG | - | chr7_3:52259075-52259094 | None:intergenic | 40.0% | |
CACGCTAATTACTGGAAAGT+GGG | - | chr7_3:52259081-52259100 | None:intergenic | 40.0% | |
ACACGCTAATTACTGGAAAG+TGG | - | chr7_3:52259082-52259101 | None:intergenic | 40.0% | |
ATCGAAGACACGCTAATTAC+TGG | - | chr7_3:52259089-52259108 | None:intergenic | 40.0% | |
! | CACCGTGTTTAAAGCAAGTT+TGG | - | chr7_3:52259168-52259187 | None:intergenic | 40.0% |
ACCAAACTTGCAGCTAATTC+AGG | - | chr7_3:52259208-52259227 | None:intergenic | 40.0% | |
TGAATTAGCTGCAAGTTTGG+TGG | + | chr7_3:52259207-52259226 | Msa1108960:intron | 40.0% | |
TGTGAAGAGGAACCGATTAT+TGG | + | chr7_3:52259348-52259367 | Msa1108960:intron | 40.0% | |
GTAGATTGAGTAACCACATG+GGG | + | chr7_3:52259412-52259431 | Msa1108960:intron | 40.0% | |
AAGTTCCAATGAAATGGGGA+TGG | - | chr7_3:52259614-52259633 | None:intergenic | 40.0% | |
! | CATCTGGGACAAATATCCTA+TGG | - | chr7_3:52259893-52259912 | None:intergenic | 40.0% |
CATAGGATATTTGTCCCAGA+TGG | + | chr7_3:52259891-52259910 | Msa1108960:CDS | 40.0% | |
! | GACTTCAAAGGTTTTCCATC+TGG | - | chr7_3:52259909-52259928 | None:intergenic | 40.0% |
!! | TCTTTTGGTGCAGACTTCAA+AGG | - | chr7_3:52259921-52259940 | None:intergenic | 40.0% |
GCTGATAAAATCTTGTTGGC+AGG | + | chr7_3:52260132-52260151 | Msa1108960:intron | 40.0% | |
GTAGTTATGCAAGACAAACC+TGG | - | chr7_3:52260271-52260290 | None:intergenic | 40.0% | |
GATGCAATTCACAATGGTGA+AGG | + | chr7_3:52260515-52260534 | Msa1108960:CDS | 40.0% | |
AGGAAAATGTTGGACTACCA+AGG | + | chr7_3:52260535-52260554 | Msa1108960:CDS | 40.0% | |
! | TTCATGCATGCTTCCTTTTC+AGG | + | chr7_3:52260623-52260642 | Msa1108960:intron | 40.0% |
AAGCAAAGAGTTGCTTGAGT+GGG | + | chr7_3:52260746-52260765 | Msa1108960:CDS | 40.0% | |
GAAGTTTACTGAGGATTTGG+GGG | - | chr7_3:52260801-52260820 | None:intergenic | 40.0% | |
!! | ACTGACTCTGAAGTTTACTG+AGG | - | chr7_3:52260810-52260829 | None:intergenic | 40.0% |
GGACAATGGCACATCTAAAA+GGG | - | chr7_3:52260883-52260902 | None:intergenic | 40.0% | |
!! | CTTTTAGATGTGCCATTGTC+CGG | + | chr7_3:52260882-52260901 | Msa1108960:three_prime_UTR | 40.0% |
! | GTTGGTAAGAGTAAGACAGT+GGG | - | chr7_3:52257261-52257280 | None:intergenic | 40.0% |
!! | AGTTGGTAAGAGTAAGACAG+TGG | - | chr7_3:52257262-52257281 | None:intergenic | 40.0% |
AAATGGGAAGAGACTAAGAG+GGG | - | chr7_3:52257343-52257362 | None:intergenic | 40.0% | |
GAAATGGGAAGAGACTAAGA+GGG | - | chr7_3:52257344-52257363 | None:intergenic | 40.0% | |
! | TGTGTTGTTACGTTCACTGT+TGG | + | chr7_3:52257789-52257808 | Msa1108960:CDS | 40.0% |
! | GTGTTGTTACGTTCACTGTT+GGG | + | chr7_3:52257790-52257809 | Msa1108960:CDS | 40.0% |
TGTTGTTACGTTCACTGTTG+GGG | + | chr7_3:52257791-52257810 | Msa1108960:CDS | 40.0% | |
CCGCTTATTTGTATTGTTGG+TGG | + | chr7_3:52257861-52257880 | Msa1108960:CDS | 40.0% | |
ACCAACCTGAAAGCAAGTAA+CGG | - | chr7_3:52257976-52257995 | None:intergenic | 40.0% | |
CAGTGAGTTTGACGAAATCA+TGG | - | chr7_3:52258293-52258312 | None:intergenic | 40.0% | |
TACACTGTCAAACTCACTAG+TGG | + | chr7_3:52258423-52258442 | Msa1108960:intron | 40.0% | |
CAGCTAAGTGTATGCATGTT+TGG | - | chr7_3:52258450-52258469 | None:intergenic | 40.0% | |
CAAAACCATGGTAAGCACTA+TGG | + | chr7_3:52258628-52258647 | Msa1108960:intron | 40.0% | |
TTTGAATTGGGGTGAGTTTG+AGG | + | chr7_3:52258691-52258710 | Msa1108960:intron | 40.0% | |
TAATTTAAGCGGGCACATTG+TGG | + | chr7_3:52258767-52258786 | Msa1108960:intron | 40.0% | |
CAACTAAGTGCATGCATGTT+TGG | - | chr7_3:52258815-52258834 | None:intergenic | 40.0% | |
ATAGGCTGTGGTGAATAACT+TGG | + | chr7_3:52258883-52258902 | Msa1108960:intron | 40.0% | |
AATTACTGGAAAGTGGGATG+AGG | - | chr7_3:52259075-52259094 | None:intergenic | 40.0% | |
CACGCTAATTACTGGAAAGT+GGG | - | chr7_3:52259081-52259100 | None:intergenic | 40.0% | |
ACACGCTAATTACTGGAAAG+TGG | - | chr7_3:52259082-52259101 | None:intergenic | 40.0% | |
ATCGAAGACACGCTAATTAC+TGG | - | chr7_3:52259089-52259108 | None:intergenic | 40.0% | |
! | CACCGTGTTTAAAGCAAGTT+TGG | - | chr7_3:52259168-52259187 | None:intergenic | 40.0% |
ACCAAACTTGCAGCTAATTC+AGG | - | chr7_3:52259208-52259227 | None:intergenic | 40.0% | |
TGAATTAGCTGCAAGTTTGG+TGG | + | chr7_3:52259207-52259226 | Msa1108960:intron | 40.0% | |
TGTGAAGAGGAACCGATTAT+TGG | + | chr7_3:52259348-52259367 | Msa1108960:intron | 40.0% | |
GTAGATTGAGTAACCACATG+GGG | + | chr7_3:52259412-52259431 | Msa1108960:intron | 40.0% | |
AAGTTCCAATGAAATGGGGA+TGG | - | chr7_3:52259614-52259633 | None:intergenic | 40.0% | |
! | CATCTGGGACAAATATCCTA+TGG | - | chr7_3:52259893-52259912 | None:intergenic | 40.0% |
CATAGGATATTTGTCCCAGA+TGG | + | chr7_3:52259891-52259910 | Msa1108960:CDS | 40.0% | |
! | GACTTCAAAGGTTTTCCATC+TGG | - | chr7_3:52259909-52259928 | None:intergenic | 40.0% |
!! | TCTTTTGGTGCAGACTTCAA+AGG | - | chr7_3:52259921-52259940 | None:intergenic | 40.0% |
GCTGATAAAATCTTGTTGGC+AGG | + | chr7_3:52260132-52260151 | Msa1108960:intron | 40.0% | |
GTAGTTATGCAAGACAAACC+TGG | - | chr7_3:52260271-52260290 | None:intergenic | 40.0% | |
GATGCAATTCACAATGGTGA+AGG | + | chr7_3:52260515-52260534 | Msa1108960:CDS | 40.0% | |
AGGAAAATGTTGGACTACCA+AGG | + | chr7_3:52260535-52260554 | Msa1108960:CDS | 40.0% | |
! | TTCATGCATGCTTCCTTTTC+AGG | + | chr7_3:52260623-52260642 | Msa1108960:intron | 40.0% |
AAGCAAAGAGTTGCTTGAGT+GGG | + | chr7_3:52260746-52260765 | Msa1108960:CDS | 40.0% | |
GAAGTTTACTGAGGATTTGG+GGG | - | chr7_3:52260801-52260820 | None:intergenic | 40.0% | |
!! | ACTGACTCTGAAGTTTACTG+AGG | - | chr7_3:52260810-52260829 | None:intergenic | 40.0% |
GGACAATGGCACATCTAAAA+GGG | - | chr7_3:52260883-52260902 | None:intergenic | 40.0% | |
!! | CTTTTAGATGTGCCATTGTC+CGG | + | chr7_3:52260882-52260901 | Msa1108960:three_prime_UTR | 40.0% |
GGAAATGGGAAGAGACTAAG+AGG | - | chr7_3:52257345-52257364 | None:intergenic | 45.0% | |
CATGAAACGACGTCGTTGTT+TGG | - | chr7_3:52257513-52257532 | None:intergenic | 45.0% | |
TGTTGTAACGAGCTGAATGC+TGG | + | chr7_3:52257723-52257742 | Msa1108960:CDS | 45.0% | |
GTTGTTACGTTCACTGTTGG+GGG | + | chr7_3:52257792-52257811 | Msa1108960:CDS | 45.0% | |
TTGTTACGTTCACTGTTGGG+GGG | + | chr7_3:52257793-52257812 | Msa1108960:CDS | 45.0% | |
TCAGACCGTTACTTGCTTTC+AGG | + | chr7_3:52257968-52257987 | Msa1108960:CDS | 45.0% | |
! | ACCGTTACTTGCTTTCAGGT+TGG | + | chr7_3:52257972-52257991 | Msa1108960:intron | 45.0% |
TGTTTGGTATCACAGACGGT+TGG | + | chr7_3:52258528-52258547 | Msa1108960:intron | 45.0% | |
! | GACGGTTGGTCAGATTATAG+TGG | + | chr7_3:52258542-52258561 | Msa1108960:intron | 45.0% |
AAAGTGGGATGAGGAATACC+AGG | - | chr7_3:52258995-52259014 | None:intergenic | 45.0% | |
ACAGGATCACGACTGAAAGT+GGG | - | chr7_3:52259010-52259029 | None:intergenic | 45.0% | |
ACTTGGGAGCGAGTGAAAAA+GGG | - | chr7_3:52259033-52259052 | None:intergenic | 45.0% | |
TACTTGGGAGCGAGTGAAAA+AGG | - | chr7_3:52259034-52259053 | None:intergenic | 45.0% | |
CATACAAAGAATCCGGCCTT+TGG | + | chr7_3:52259123-52259142 | Msa1108960:intron | 45.0% | |
GCCTGAATTAGCTGCAAGTT+TGG | + | chr7_3:52259204-52259223 | Msa1108960:intron | 45.0% | |
! | CTGCAAGTTTGGTGGAATCA+TGG | + | chr7_3:52259215-52259234 | Msa1108960:intron | 45.0% |
! | CAAGTTTGGTGGAATCATGG+TGG | + | chr7_3:52259218-52259237 | Msa1108960:intron | 45.0% |
ATTGAGTAACCACATGGGGT+TGG | + | chr7_3:52259416-52259435 | Msa1108960:CDS | 45.0% | |
GCAGTAAAACCTGTGCTAGT+AGG | + | chr7_3:52259477-52259496 | Msa1108960:CDS | 45.0% | |
GTAAAACCTGTGCTAGTAGG+TGG | + | chr7_3:52259480-52259499 | Msa1108960:CDS | 45.0% | |
TAGTAGGTGGTCCTAAACTG+AGG | + | chr7_3:52259493-52259512 | Msa1108960:CDS | 45.0% | |
AGTAGGTGGTCCTAAACTGA+GGG | + | chr7_3:52259494-52259513 | Msa1108960:CDS | 45.0% | |
!! | TTATTGGGGTGCTGTGAGTA+CGG | + | chr7_3:52259632-52259651 | Msa1108960:CDS | 45.0% |
GCTGATGCATACTTGTTTGC+CGG | + | chr7_3:52259681-52259700 | Msa1108960:CDS | 45.0% | |
ATTAGCAACCACAACCCGAT+CGG | - | chr7_3:52259781-52259800 | None:intergenic | 45.0% | |
! | GTTGCTAATGGACCTGCATT+TGG | + | chr7_3:52259792-52259811 | Msa1108960:CDS | 45.0% |
ACTGCTGTAATTGCTGAGAC+AGG | + | chr7_3:52259996-52260015 | Msa1108960:CDS | 45.0% | |
CTGCTGTAATTGCTGAGACA+GGG | + | chr7_3:52259997-52260016 | Msa1108960:CDS | 45.0% | |
TGCTGTAATTGCTGAGACAG+GGG | + | chr7_3:52259998-52260017 | Msa1108960:CDS | 45.0% | |
GGTTCAATTGGATGGTCTGT+TGG | + | chr7_3:52260176-52260195 | Msa1108960:CDS | 45.0% | |
AAGCGAGTGATTGCTTGCAT+TGG | + | chr7_3:52260233-52260252 | Msa1108960:CDS | 45.0% | |
! | GTGATTGCTTGCATTGGTGA+TGG | + | chr7_3:52260239-52260258 | Msa1108960:CDS | 45.0% |
TGCTTTACAGGTAACTGCAC+AGG | + | chr7_3:52260358-52260377 | Msa1108960:intron | 45.0% | |
CAATGGAGGATACACCATTG+AGG | + | chr7_3:52260433-52260452 | Msa1108960:CDS | 45.0% | |
CAATGTCAAACGACTCACCT+TGG | - | chr7_3:52260555-52260574 | None:intergenic | 45.0% | |
GAAGCAATTGCAACAGCAAC+AGG | + | chr7_3:52260669-52260688 | Msa1108960:CDS | 45.0% | |
CAAGCAAAGAGTTGCTTGAG+TGG | + | chr7_3:52260745-52260764 | Msa1108960:CDS | 45.0% | |
AGCAAAGAGTTGCTTGAGTG+GGG | + | chr7_3:52260747-52260766 | Msa1108960:CDS | 45.0% | |
TTTACTGAGGATTTGGGGGA+CGG | - | chr7_3:52260797-52260816 | None:intergenic | 45.0% | |
CGGACAATGGCACATCTAAA+AGG | - | chr7_3:52260884-52260903 | None:intergenic | 45.0% | |
! | AGACACTGTTACTTAGTCCC+TGG | + | chr7_3:52261099-52261118 | Msa1108960:three_prime_UTR | 45.0% |
GGAAATGGGAAGAGACTAAG+AGG | - | chr7_3:52257345-52257364 | None:intergenic | 45.0% | |
CATGAAACGACGTCGTTGTT+TGG | - | chr7_3:52257513-52257532 | None:intergenic | 45.0% | |
TGTTGTAACGAGCTGAATGC+TGG | + | chr7_3:52257723-52257742 | Msa1108960:CDS | 45.0% | |
GTTGTTACGTTCACTGTTGG+GGG | + | chr7_3:52257792-52257811 | Msa1108960:CDS | 45.0% | |
TTGTTACGTTCACTGTTGGG+GGG | + | chr7_3:52257793-52257812 | Msa1108960:CDS | 45.0% | |
TCAGACCGTTACTTGCTTTC+AGG | + | chr7_3:52257968-52257987 | Msa1108960:CDS | 45.0% | |
! | ACCGTTACTTGCTTTCAGGT+TGG | + | chr7_3:52257972-52257991 | Msa1108960:intron | 45.0% |
TGTTTGGTATCACAGACGGT+TGG | + | chr7_3:52258528-52258547 | Msa1108960:intron | 45.0% | |
! | GACGGTTGGTCAGATTATAG+TGG | + | chr7_3:52258542-52258561 | Msa1108960:intron | 45.0% |
AAAGTGGGATGAGGAATACC+AGG | - | chr7_3:52258995-52259014 | None:intergenic | 45.0% | |
ACAGGATCACGACTGAAAGT+GGG | - | chr7_3:52259010-52259029 | None:intergenic | 45.0% | |
ACTTGGGAGCGAGTGAAAAA+GGG | - | chr7_3:52259033-52259052 | None:intergenic | 45.0% | |
TACTTGGGAGCGAGTGAAAA+AGG | - | chr7_3:52259034-52259053 | None:intergenic | 45.0% | |
CATACAAAGAATCCGGCCTT+TGG | + | chr7_3:52259123-52259142 | Msa1108960:intron | 45.0% | |
GCCTGAATTAGCTGCAAGTT+TGG | + | chr7_3:52259204-52259223 | Msa1108960:intron | 45.0% | |
! | CTGCAAGTTTGGTGGAATCA+TGG | + | chr7_3:52259215-52259234 | Msa1108960:intron | 45.0% |
! | CAAGTTTGGTGGAATCATGG+TGG | + | chr7_3:52259218-52259237 | Msa1108960:intron | 45.0% |
ATTGAGTAACCACATGGGGT+TGG | + | chr7_3:52259416-52259435 | Msa1108960:CDS | 45.0% | |
GCAGTAAAACCTGTGCTAGT+AGG | + | chr7_3:52259477-52259496 | Msa1108960:CDS | 45.0% | |
GTAAAACCTGTGCTAGTAGG+TGG | + | chr7_3:52259480-52259499 | Msa1108960:CDS | 45.0% | |
TAGTAGGTGGTCCTAAACTG+AGG | + | chr7_3:52259493-52259512 | Msa1108960:CDS | 45.0% | |
AGTAGGTGGTCCTAAACTGA+GGG | + | chr7_3:52259494-52259513 | Msa1108960:CDS | 45.0% | |
!! | TTATTGGGGTGCTGTGAGTA+CGG | + | chr7_3:52259632-52259651 | Msa1108960:CDS | 45.0% |
GCTGATGCATACTTGTTTGC+CGG | + | chr7_3:52259681-52259700 | Msa1108960:CDS | 45.0% | |
ATTAGCAACCACAACCCGAT+CGG | - | chr7_3:52259781-52259800 | None:intergenic | 45.0% | |
! | GTTGCTAATGGACCTGCATT+TGG | + | chr7_3:52259792-52259811 | Msa1108960:CDS | 45.0% |
ACTGCTGTAATTGCTGAGAC+AGG | + | chr7_3:52259996-52260015 | Msa1108960:CDS | 45.0% | |
CTGCTGTAATTGCTGAGACA+GGG | + | chr7_3:52259997-52260016 | Msa1108960:CDS | 45.0% | |
TGCTGTAATTGCTGAGACAG+GGG | + | chr7_3:52259998-52260017 | Msa1108960:CDS | 45.0% | |
GGTTCAATTGGATGGTCTGT+TGG | + | chr7_3:52260176-52260195 | Msa1108960:CDS | 45.0% | |
AAGCGAGTGATTGCTTGCAT+TGG | + | chr7_3:52260233-52260252 | Msa1108960:CDS | 45.0% | |
! | GTGATTGCTTGCATTGGTGA+TGG | + | chr7_3:52260239-52260258 | Msa1108960:CDS | 45.0% |
TGCTTTACAGGTAACTGCAC+AGG | + | chr7_3:52260358-52260377 | Msa1108960:intron | 45.0% | |
CAATGGAGGATACACCATTG+AGG | + | chr7_3:52260433-52260452 | Msa1108960:CDS | 45.0% | |
CAATGTCAAACGACTCACCT+TGG | - | chr7_3:52260555-52260574 | None:intergenic | 45.0% | |
GAAGCAATTGCAACAGCAAC+AGG | + | chr7_3:52260669-52260688 | Msa1108960:CDS | 45.0% | |
CAAGCAAAGAGTTGCTTGAG+TGG | + | chr7_3:52260745-52260764 | Msa1108960:CDS | 45.0% | |
AGCAAAGAGTTGCTTGAGTG+GGG | + | chr7_3:52260747-52260766 | Msa1108960:CDS | 45.0% | |
TTTACTGAGGATTTGGGGGA+CGG | - | chr7_3:52260797-52260816 | None:intergenic | 45.0% | |
CGGACAATGGCACATCTAAA+AGG | - | chr7_3:52260884-52260903 | None:intergenic | 45.0% | |
! | AGACACTGTTACTTAGTCCC+TGG | + | chr7_3:52261099-52261118 | Msa1108960:three_prime_UTR | 45.0% |
! | GTAAGACAGTGGGAGGTACA+TGG | - | chr7_3:52257251-52257270 | None:intergenic | 50.0% |
GGTAAGAGTAAGACAGTGGG+AGG | - | chr7_3:52257258-52257277 | None:intergenic | 50.0% | |
AGTGTGAGGTTGAAGTCTCC+GGG | - | chr7_3:52257660-52257679 | None:intergenic | 50.0% | |
GAGTGTGAGGTTGAAGTCTC+CGG | - | chr7_3:52257661-52257680 | None:intergenic | 50.0% | |
GTTCATTGACGAGATGGTCG+AGG | - | chr7_3:52257683-52257702 | None:intergenic | 50.0% | |
CGACCATCTCGTCAATGAAC+CGG | + | chr7_3:52257683-52257702 | Msa1108960:CDS | 50.0% | |
GCTCGTTACAACAACCGATG+AGG | - | chr7_3:52257716-52257735 | None:intergenic | 50.0% | |
! | CGAGCTGAATGCTGGTTATG+CGG | + | chr7_3:52257731-52257750 | Msa1108960:CDS | 50.0% |
! | AATGCTGGTTATGCGGCTGA+CGG | + | chr7_3:52257738-52257757 | Msa1108960:CDS | 50.0% |
CGCAACCATAGTGCTTACCA+TGG | - | chr7_3:52258636-52258655 | None:intergenic | 50.0% | |
!! | AGCATTGGCTGTAACTTGCC+TGG | + | chr7_3:52258974-52258993 | Msa1108960:CDS | 50.0% |
TCACGACTGAAAGTGGGATG+AGG | - | chr7_3:52259004-52259023 | None:intergenic | 50.0% | |
GACAGGATCACGACTGAAAG+TGG | - | chr7_3:52259011-52259030 | None:intergenic | 50.0% | |
TTAGGACCACCTACTAGCAC+AGG | - | chr7_3:52259489-52259508 | None:intergenic | 50.0% | |
CGCATCAGCTAGTTCGACAA+AGG | - | chr7_3:52259538-52259557 | None:intergenic | 50.0% | |
CCCTTTAGCTGATGGCATCA+CGG | - | chr7_3:52259577-52259596 | None:intergenic | 50.0% | |
CCGTGATGCCATCAGCTAAA+GGG | + | chr7_3:52259574-52259593 | Msa1108960:CDS | 50.0% | |
GATGCCATCAGCTAAAGGGA+TGG | + | chr7_3:52259578-52259597 | Msa1108960:CDS | 50.0% | |
TGAAATGGGGATGGTGCTCA+GGG | - | chr7_3:52259605-52259624 | None:intergenic | 50.0% | |
ATGAAATGGGGATGGTGCTC+AGG | - | chr7_3:52259606-52259625 | None:intergenic | 50.0% | |
GAGCACCATCCCCATTTCAT+TGG | + | chr7_3:52259606-52259625 | Msa1108960:CDS | 50.0% | |
CAATCATTGTGCAGCCCGAT+CGG | + | chr7_3:52259763-52259782 | Msa1108960:CDS | 50.0% | |
AATCATTGTGCAGCCCGATC+GGG | + | chr7_3:52259764-52259783 | Msa1108960:CDS | 50.0% | |
TTAGCAACCACAACCCGATC+GGG | - | chr7_3:52259780-52259799 | None:intergenic | 50.0% | |
! | GATCGGGTTGTGGTTGCTAA+TGG | + | chr7_3:52259780-52259799 | Msa1108960:CDS | 50.0% |
!! | GACGCTTCGAAAGTGCCTTT+AGG | - | chr7_3:52259839-52259858 | None:intergenic | 50.0% |
TTGAAATTGCCCGAGGGATG+TGG | + | chr7_3:52260044-52260063 | Msa1108960:CDS | 50.0% | |
TGAAATTGCCCGAGGGATGT+GGG | + | chr7_3:52260045-52260064 | Msa1108960:CDS | 50.0% | |
AACACTTACCCACATCCCTC+GGG | - | chr7_3:52260056-52260075 | None:intergenic | 50.0% | |
GAACACTTACCCACATCCCT+CGG | - | chr7_3:52260057-52260076 | None:intergenic | 50.0% | |
TGGTCTGTTGGTGCAACTCT+TGG | + | chr7_3:52260188-52260207 | Msa1108960:CDS | 50.0% | |
AAGCAATCACTCGCTTCTCG+GGG | - | chr7_3:52260229-52260248 | None:intergenic | 50.0% | |
CAAGCAATCACTCGCTTCTC+GGG | - | chr7_3:52260230-52260249 | None:intergenic | 50.0% | |
GCAAGCAATCACTCGCTTCT+CGG | - | chr7_3:52260231-52260250 | None:intergenic | 50.0% | |
!! | CATTGGTGATGGAAGCTTCC+AGG | + | chr7_3:52260250-52260269 | Msa1108960:CDS | 50.0% |
! | AGGATGTGTCGACAATGCTG+AGG | + | chr7_3:52260378-52260397 | Msa1108960:CDS | 50.0% |
! | GTAAGACAGTGGGAGGTACA+TGG | - | chr7_3:52257251-52257270 | None:intergenic | 50.0% |
GGTAAGAGTAAGACAGTGGG+AGG | - | chr7_3:52257258-52257277 | None:intergenic | 50.0% | |
AGTGTGAGGTTGAAGTCTCC+GGG | - | chr7_3:52257660-52257679 | None:intergenic | 50.0% | |
GAGTGTGAGGTTGAAGTCTC+CGG | - | chr7_3:52257661-52257680 | None:intergenic | 50.0% | |
GTTCATTGACGAGATGGTCG+AGG | - | chr7_3:52257683-52257702 | None:intergenic | 50.0% | |
CGACCATCTCGTCAATGAAC+CGG | + | chr7_3:52257683-52257702 | Msa1108960:CDS | 50.0% | |
GCTCGTTACAACAACCGATG+AGG | - | chr7_3:52257716-52257735 | None:intergenic | 50.0% | |
! | CGAGCTGAATGCTGGTTATG+CGG | + | chr7_3:52257731-52257750 | Msa1108960:CDS | 50.0% |
! | AATGCTGGTTATGCGGCTGA+CGG | + | chr7_3:52257738-52257757 | Msa1108960:CDS | 50.0% |
CGCAACCATAGTGCTTACCA+TGG | - | chr7_3:52258636-52258655 | None:intergenic | 50.0% | |
!! | AGCATTGGCTGTAACTTGCC+TGG | + | chr7_3:52258974-52258993 | Msa1108960:CDS | 50.0% |
TCACGACTGAAAGTGGGATG+AGG | - | chr7_3:52259004-52259023 | None:intergenic | 50.0% | |
GACAGGATCACGACTGAAAG+TGG | - | chr7_3:52259011-52259030 | None:intergenic | 50.0% | |
TTAGGACCACCTACTAGCAC+AGG | - | chr7_3:52259489-52259508 | None:intergenic | 50.0% | |
CGCATCAGCTAGTTCGACAA+AGG | - | chr7_3:52259538-52259557 | None:intergenic | 50.0% | |
CCCTTTAGCTGATGGCATCA+CGG | - | chr7_3:52259577-52259596 | None:intergenic | 50.0% | |
CCGTGATGCCATCAGCTAAA+GGG | + | chr7_3:52259574-52259593 | Msa1108960:CDS | 50.0% | |
GATGCCATCAGCTAAAGGGA+TGG | + | chr7_3:52259578-52259597 | Msa1108960:CDS | 50.0% | |
TGAAATGGGGATGGTGCTCA+GGG | - | chr7_3:52259605-52259624 | None:intergenic | 50.0% | |
ATGAAATGGGGATGGTGCTC+AGG | - | chr7_3:52259606-52259625 | None:intergenic | 50.0% | |
GAGCACCATCCCCATTTCAT+TGG | + | chr7_3:52259606-52259625 | Msa1108960:CDS | 50.0% | |
CAATCATTGTGCAGCCCGAT+CGG | + | chr7_3:52259763-52259782 | Msa1108960:CDS | 50.0% | |
AATCATTGTGCAGCCCGATC+GGG | + | chr7_3:52259764-52259783 | Msa1108960:CDS | 50.0% | |
TTAGCAACCACAACCCGATC+GGG | - | chr7_3:52259780-52259799 | None:intergenic | 50.0% | |
! | GATCGGGTTGTGGTTGCTAA+TGG | + | chr7_3:52259780-52259799 | Msa1108960:CDS | 50.0% |
!! | GACGCTTCGAAAGTGCCTTT+AGG | - | chr7_3:52259839-52259858 | None:intergenic | 50.0% |
TTGAAATTGCCCGAGGGATG+TGG | + | chr7_3:52260044-52260063 | Msa1108960:CDS | 50.0% | |
TGAAATTGCCCGAGGGATGT+GGG | + | chr7_3:52260045-52260064 | Msa1108960:CDS | 50.0% | |
AACACTTACCCACATCCCTC+GGG | - | chr7_3:52260056-52260075 | None:intergenic | 50.0% | |
GAACACTTACCCACATCCCT+CGG | - | chr7_3:52260057-52260076 | None:intergenic | 50.0% | |
TGGTCTGTTGGTGCAACTCT+TGG | + | chr7_3:52260188-52260207 | Msa1108960:CDS | 50.0% | |
AAGCAATCACTCGCTTCTCG+GGG | - | chr7_3:52260229-52260248 | None:intergenic | 50.0% | |
CAAGCAATCACTCGCTTCTC+GGG | - | chr7_3:52260230-52260249 | None:intergenic | 50.0% | |
GCAAGCAATCACTCGCTTCT+CGG | - | chr7_3:52260231-52260250 | None:intergenic | 50.0% | |
!! | CATTGGTGATGGAAGCTTCC+AGG | + | chr7_3:52260250-52260269 | Msa1108960:CDS | 50.0% |
! | AGGATGTGTCGACAATGCTG+AGG | + | chr7_3:52260378-52260397 | Msa1108960:CDS | 50.0% |
!! | TGACGCCGACTTGGACTAGT+CGG | - | chr7_3:52257620-52257639 | None:intergenic | 55.0% |
GAGGTTGAAGTCTCCGGGAA+CGG | - | chr7_3:52257655-52257674 | None:intergenic | 55.0% | |
GCTCCGGTTCATTGACGAGA+TGG | - | chr7_3:52257689-52257708 | None:intergenic | 55.0% | |
GAACCGGAGCTGAACCTCAT+CGG | + | chr7_3:52257699-52257718 | Msa1108960:CDS | 55.0% | |
CAACCGATGAGGTTCAGCTC+CGG | - | chr7_3:52257705-52257724 | None:intergenic | 55.0% | |
ATGCGGCTGACGGTTATGCT+CGG | + | chr7_3:52257748-52257767 | Msa1108960:CDS | 55.0% | |
TATGCTCGGTCACGTGGTGT+CGG | + | chr7_3:52257762-52257781 | Msa1108960:CDS | 55.0% | |
GGAGCGAGTGAAAAAGGGAC+AGG | - | chr7_3:52259028-52259047 | None:intergenic | 55.0% | |
AGGTGGTCCTAAACTGAGGG+TGG | + | chr7_3:52259497-52259516 | Msa1108960:CDS | 55.0% | |
GCTTTCGCCACCCTCAGTTT+AGG | - | chr7_3:52259507-52259526 | None:intergenic | 55.0% | |
GTCGAACTAGCTGATGCGAG+TGG | + | chr7_3:52259540-52259559 | Msa1108960:CDS | 55.0% | |
GCCGTGATGCCATCAGCTAA+AGG | + | chr7_3:52259573-52259592 | Msa1108960:CDS | 55.0% | |
GGGACCATCCCTTTAGCTGA+TGG | - | chr7_3:52259585-52259604 | None:intergenic | 55.0% | |
TTGCTGAGACAGGGGACTCA+TGG | + | chr7_3:52260006-52260025 | Msa1108960:CDS | 55.0% | |
AGTTGCTTGAGTGGGGTTCC+AGG | + | chr7_3:52260754-52260773 | Msa1108960:CDS | 55.0% | |
GTTGCTTGAGTGGGGTTCCA+GGG | + | chr7_3:52260755-52260774 | Msa1108960:CDS | 55.0% | |
AGGATTTGGGGGACGGCTAT+TGG | - | chr7_3:52260790-52260809 | None:intergenic | 55.0% | |
!! | TGACGCCGACTTGGACTAGT+CGG | - | chr7_3:52257620-52257639 | None:intergenic | 55.0% |
GAGGTTGAAGTCTCCGGGAA+CGG | - | chr7_3:52257655-52257674 | None:intergenic | 55.0% | |
GCTCCGGTTCATTGACGAGA+TGG | - | chr7_3:52257689-52257708 | None:intergenic | 55.0% | |
GAACCGGAGCTGAACCTCAT+CGG | + | chr7_3:52257699-52257718 | Msa1108960:CDS | 55.0% | |
CAACCGATGAGGTTCAGCTC+CGG | - | chr7_3:52257705-52257724 | None:intergenic | 55.0% | |
ATGCGGCTGACGGTTATGCT+CGG | + | chr7_3:52257748-52257767 | Msa1108960:CDS | 55.0% | |
TATGCTCGGTCACGTGGTGT+CGG | + | chr7_3:52257762-52257781 | Msa1108960:CDS | 55.0% | |
GGAGCGAGTGAAAAAGGGAC+AGG | - | chr7_3:52259028-52259047 | None:intergenic | 55.0% | |
AGGTGGTCCTAAACTGAGGG+TGG | + | chr7_3:52259497-52259516 | Msa1108960:CDS | 55.0% | |
GCTTTCGCCACCCTCAGTTT+AGG | - | chr7_3:52259507-52259526 | None:intergenic | 55.0% | |
GTCGAACTAGCTGATGCGAG+TGG | + | chr7_3:52259540-52259559 | Msa1108960:CDS | 55.0% | |
GCCGTGATGCCATCAGCTAA+AGG | + | chr7_3:52259573-52259592 | Msa1108960:CDS | 55.0% | |
GGGACCATCCCTTTAGCTGA+TGG | - | chr7_3:52259585-52259604 | None:intergenic | 55.0% | |
TTGCTGAGACAGGGGACTCA+TGG | + | chr7_3:52260006-52260025 | Msa1108960:CDS | 55.0% | |
AGTTGCTTGAGTGGGGTTCC+AGG | + | chr7_3:52260754-52260773 | Msa1108960:CDS | 55.0% | |
GTTGCTTGAGTGGGGTTCCA+GGG | + | chr7_3:52260755-52260774 | Msa1108960:CDS | 55.0% | |
AGGATTTGGGGGACGGCTAT+TGG | - | chr7_3:52260790-52260809 | None:intergenic | 55.0% | |
! | GGTGGCTGGTTGGATCGAAG+AGG | - | chr7_3:52257553-52257572 | None:intergenic | 60.0% |
! | GCACGCCGACTAGTCCAAGT+CGG | + | chr7_3:52257612-52257631 | Msa1108960:CDS | 60.0% |
ACCGACGTCTTCTCCGTTCC+CGG | + | chr7_3:52257639-52257658 | Msa1108960:CDS | 60.0% | |
TCCGGGAACGGAGAAGACGT+CGG | - | chr7_3:52257643-52257662 | None:intergenic | 60.0% | |
! | CGAGATGGTCGAGGAGTGTG+AGG | - | chr7_3:52257674-52257693 | None:intergenic | 60.0% |
GACGGTTATGCTCGGTCACG+TGG | + | chr7_3:52257756-52257775 | Msa1108960:CDS | 60.0% | |
! | CTGCTGCTTCCAACCCCATG+TGG | - | chr7_3:52259428-52259447 | None:intergenic | 60.0% |
GGGGTTGGAAGCAGCAGTTG+AGG | + | chr7_3:52259431-52259450 | Msa1108960:CDS | 60.0% | |
GCTATTGGCAGCAGAGACCC+TGG | - | chr7_3:52260775-52260794 | None:intergenic | 60.0% | |
! | GGTGGCTGGTTGGATCGAAG+AGG | - | chr7_3:52257553-52257572 | None:intergenic | 60.0% |
! | GCACGCCGACTAGTCCAAGT+CGG | + | chr7_3:52257612-52257631 | Msa1108960:CDS | 60.0% |
ACCGACGTCTTCTCCGTTCC+CGG | + | chr7_3:52257639-52257658 | Msa1108960:CDS | 60.0% | |
TCCGGGAACGGAGAAGACGT+CGG | - | chr7_3:52257643-52257662 | None:intergenic | 60.0% | |
! | CGAGATGGTCGAGGAGTGTG+AGG | - | chr7_3:52257674-52257693 | None:intergenic | 60.0% |
GACGGTTATGCTCGGTCACG+TGG | + | chr7_3:52257756-52257775 | Msa1108960:CDS | 60.0% | |
! | CTGCTGCTTCCAACCCCATG+TGG | - | chr7_3:52259428-52259447 | None:intergenic | 60.0% |
GGGGTTGGAAGCAGCAGTTG+AGG | + | chr7_3:52259431-52259450 | Msa1108960:CDS | 60.0% | |
GCTATTGGCAGCAGAGACCC+TGG | - | chr7_3:52260775-52260794 | None:intergenic | 60.0% | |
GCCTCCTGCGACGCTACACT+CGG | + | chr7_3:52257579-52257598 | Msa1108960:CDS | 65.0% | |
CTAGTCGGCGTGCGAGATGG+CGG | - | chr7_3:52257605-52257624 | None:intergenic | 65.0% | |
!! | GGACTAGTCGGCGTGCGAGA+TGG | - | chr7_3:52257608-52257627 | None:intergenic | 65.0% |
! | AGACGTCGGTGACGCCGACT+TGG | - | chr7_3:52257629-52257648 | None:intergenic | 65.0% |
! | TGTGCAGCCCGATCGGGTTG+TGG | + | chr7_3:52259770-52259789 | Msa1108960:CDS | 65.0% |
GCCTCCTGCGACGCTACACT+CGG | + | chr7_3:52257579-52257598 | Msa1108960:CDS | 65.0% | |
CTAGTCGGCGTGCGAGATGG+CGG | - | chr7_3:52257605-52257624 | None:intergenic | 65.0% | |
!! | GGACTAGTCGGCGTGCGAGA+TGG | - | chr7_3:52257608-52257627 | None:intergenic | 65.0% |
! | AGACGTCGGTGACGCCGACT+TGG | - | chr7_3:52257629-52257648 | None:intergenic | 65.0% |
! | TGTGCAGCCCGATCGGGTTG+TGG | + | chr7_3:52259770-52259789 | Msa1108960:CDS | 65.0% |
AGGCGATCGCGGTGGCTGGT+TGG | - | chr7_3:52257563-52257582 | None:intergenic | 70.0% | |
AGCGTCGCAGGAGGCGATCG+CGG | - | chr7_3:52257574-52257593 | None:intergenic | 70.0% | |
GCCGAGTGTAGCGTCGCAGG+AGG | - | chr7_3:52257583-52257602 | None:intergenic | 70.0% | |
AGGCGATCGCGGTGGCTGGT+TGG | - | chr7_3:52257563-52257582 | None:intergenic | 70.0% | |
AGCGTCGCAGGAGGCGATCG+CGG | - | chr7_3:52257574-52257593 | None:intergenic | 70.0% | |
GCCGAGTGTAGCGTCGCAGG+AGG | - | chr7_3:52257583-52257602 | None:intergenic | 70.0% | |
CAGGAGGCGATCGCGGTGGC+TGG | - | chr7_3:52257567-52257586 | None:intergenic | 75.0% | |
GTCGCAGGAGGCGATCGCGG+TGG | - | chr7_3:52257571-52257590 | None:intergenic | 75.0% | |
GCGGCCGAGTGTAGCGTCGC+AGG | - | chr7_3:52257586-52257605 | None:intergenic | 75.0% | |
CAGGAGGCGATCGCGGTGGC+TGG | - | chr7_3:52257567-52257586 | None:intergenic | 75.0% | |
GTCGCAGGAGGCGATCGCGG+TGG | - | chr7_3:52257571-52257590 | None:intergenic | 75.0% | |
GCGGCCGAGTGTAGCGTCGC+AGG | - | chr7_3:52257586-52257605 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 52257219 | 52261132 | 52257219 | ID=Msa1108960;Name=Msa1108960 |
chr7_3 | mRNA | 52257219 | 52261132 | 52257219 | ID=Msa1108960-mRNA-1;Parent=Msa1108960;Name=Msa1108960-mRNA-1;_AED=0.24;_eAED=0.24;_QI=252|1|1|1|0.83|0.71|7|292|603 |
chr7_3 | exon | 52257219 | 52257989 | 52257219 | ID=Msa1108960-mRNA-1:exon:10927;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52258887 | 52259050 | 52258887 | ID=Msa1108960-mRNA-1:exon:10928;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52259416 | 52260066 | 52259416 | ID=Msa1108960-mRNA-1:exon:10929;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52260154 | 52260271 | 52260154 | ID=Msa1108960-mRNA-1:exon:10930;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52260368 | 52260556 | 52260368 | ID=Msa1108960-mRNA-1:exon:10931;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52260645 | 52260916 | 52260645 | ID=Msa1108960-mRNA-1:exon:10932;Parent=Msa1108960-mRNA-1 |
chr7_3 | exon | 52260942 | 52261132 | 52260942 | ID=Msa1108960-mRNA-1:exon:10933;Parent=Msa1108960-mRNA-1 |
chr7_3 | five_prime_UTR | 52257219 | 52257470 | 52257219 | ID=Msa1108960-mRNA-1:five_prime_utr;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52257471 | 52257989 | 52257471 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52258887 | 52259050 | 52258887 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52259416 | 52260066 | 52259416 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52260154 | 52260271 | 52260154 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52260368 | 52260556 | 52260368 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | CDS | 52260645 | 52260815 | 52260645 | ID=Msa1108960-mRNA-1:cds;Parent=Msa1108960-mRNA-1 |
chr7_3 | three_prime_UTR | 52260816 | 52260916 | 52260816 | ID=Msa1108960-mRNA-1:three_prime_utr;Parent=Msa1108960-mRNA-1 |
chr7_3 | three_prime_UTR | 52260942 | 52261132 | 52260942 | ID=Msa1108960-mRNA-1:three_prime_utr;Parent=Msa1108960-mRNA-1 |
Gene Sequence |
Protein sequence |