AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0620270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620270 MtrunA17_Chr8g0386171 84.150 347 24 1 9 324 16 362 0.0 595
Msa0620270 MtrunA17_Chr8g0386201 46.154 312 154 2 1 299 1 311 1.74e-92 279
Msa0620270 MtrunA17_Chr5g0396351 40.984 305 170 3 1 296 1 304 2.93e-74 233
Msa0620270 MtrunA17_Chr8g0386191 68.571 140 25 5 126 262 54 177 1.29e-53 174
Msa0620270 MtrunA17_Chr4g0026001 30.222 225 149 5 45 264 14 235 7.79e-20 87.4
Msa0620270 MtrunA17_Chr4g0025971 29.825 228 146 6 45 264 14 235 3.74e-18 82.8
Msa0620270 MtrunA17_Chr4g0025981 31.088 193 122 4 48 235 44 230 1.21e-17 82.4
Msa0620270 MtrunA17_Chr7g0267011 29.843 191 123 4 45 230 8 192 1.37e-17 79.7
Msa0620270 MtrunA17_Chr7g0249571 28.682 258 170 8 43 293 36 286 5.89e-17 80.1
Msa0620270 MtrunA17_Chr3g0124471 31.884 207 128 7 34 235 13 211 7.45e-17 79.7
Msa0620270 MtrunA17_Chr4g0054341 31.088 193 124 5 46 235 3 189 1.60e-16 78.6
Msa0620270 MtrunA17_Chr3g0122901 32.057 209 130 8 50 251 80 283 2.16e-16 78.6
Msa0620270 MtrunA17_Chr4g0044131 28.947 190 124 4 43 227 6 189 1.40e-15 75.5
Msa0620270 MtrunA17_Chr6g0459281 28.788 198 126 7 48 237 16 206 1.85e-15 75.1
Msa0620270 MtrunA17_Chr4g0045041 27.778 198 132 3 51 237 10 207 8.07e-15 75.1
Msa0620270 MtrunA17_Chr7g0244061 29.756 205 133 6 45 242 29 229 1.02e-14 73.6
Msa0620270 MtrunA17_Chr3g0124481 35.606 132 81 3 105 234 66 195 2.63e-14 72.0
Msa0620270 MtrunA17_Chr4g0045061 26.263 198 135 3 51 237 10 207 2.73e-14 73.6
Msa0620270 MtrunA17_Chr8g0357481 32.500 200 114 7 45 230 14 206 4.26e-14 71.6
Msa0620270 MtrunA17_Chr7g0270451 33.005 203 129 4 43 242 4 202 4.48e-14 71.2
Msa0620270 MtrunA17_Chr7g0268591 31.443 194 119 7 45 232 33 218 5.95e-14 71.2
Msa0620270 MtrunA17_Chr4g0040371 30.256 195 127 3 48 239 22 210 1.55e-13 69.7
Msa0620270 MtrunA17_Chr6g0459351 27.451 204 138 5 41 237 6 206 2.29e-13 69.3
Msa0620270 MtrunA17_Chr7g0266981 29.798 198 128 5 45 237 13 204 1.06e-12 67.4
Msa0620270 MtrunA17_Chr7g0272961 28.230 209 141 4 45 246 40 246 2.37e-12 66.6
Msa0620270 MtrunA17_Chr4g0044111 29.293 198 129 5 45 237 13 204 6.32e-12 65.1
Msa0620270 MtrunA17_Chr7g0266891 28.922 204 134 5 39 237 1 198 7.55e-12 64.7
Msa0620270 MtrunA17_Chr3g0084871 29.902 204 126 7 48 242 19 214 3.83e-11 62.8
Msa0620270 MtrunA17_Chr6g0459301 26.829 246 144 8 51 283 20 242 5.47e-11 62.0
Msa0620270 MtrunA17_Chr2g0287951 28.934 197 123 5 48 233 36 226 6.60e-11 62.4
Msa0620270 MtrunA17_Chr3g0123251 27.313 227 154 7 15 235 25 246 7.04e-11 62.4
Msa0620270 MtrunA17_Chr4g0028921 25.957 235 147 10 48 262 14 241 9.30e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620270 AT5G50700.1 46.624 311 153 3 1 299 1 310 2.18e-94 284
Msa0620270 AT5G50600.1 46.624 311 153 3 1 299 1 310 2.18e-94 284
Msa0620270 AT3G47350.1 49.032 310 154 4 1 309 1 307 4.69e-94 282
Msa0620270 AT3G47360.1 47.811 297 154 1 13 309 13 308 3.49e-91 275
Msa0620270 AT5G50590.1 49.481 289 139 5 7 291 7 292 5.52e-91 273
Msa0620270 AT5G50690.1 49.481 289 139 5 7 291 7 292 5.52e-91 273
Msa0620270 AT5G50770.1 45.130 308 156 2 1 296 1 307 1.46e-88 269
Msa0620270 AT3G47350.2 50.951 263 125 4 1 262 1 260 1.51e-80 248
Msa0620270 AT5G50590.2 51.982 227 106 3 7 232 7 231 1.21e-75 233
Msa0620270 AT5G50690.2 51.982 227 106 3 7 232 7 231 1.21e-75 233
Msa0620270 AT4G10020.1 42.667 300 161 5 4 293 5 303 4.94e-74 233
Msa0620270 AT3G47350.3 42.258 310 131 5 1 309 1 263 2.07e-67 212
Msa0620270 AT3G03330.1 29.225 284 191 8 36 311 32 313 4.89e-20 89.4
Msa0620270 AT5G10050.1 31.500 200 110 6 50 238 10 193 2.87e-19 86.7
Msa0620270 AT1G49670.2 32.143 196 122 4 51 235 10 205 3.10e-17 82.8
Msa0620270 AT1G49670.1 32.143 196 122 4 51 235 10 205 3.49e-17 82.8
Msa0620270 AT5G65205.1 30.732 205 115 6 42 235 3 191 8.20e-17 79.7
Msa0620270 AT1G24360.1 31.163 215 138 7 43 251 72 282 7.23e-16 77.4
Msa0620270 AT3G51680.1 30.918 207 131 5 43 240 30 233 1.28e-14 73.6
Msa0620270 AT1G54870.1 30.049 203 131 5 48 242 85 284 2.87e-14 72.8
Msa0620270 AT1G54870.2 30.049 203 131 5 48 242 87 286 3.16e-14 72.8
Msa0620270 AT3G26770.1 29.146 199 132 6 42 236 38 231 1.12e-13 70.9
Msa0620270 AT3G26760.1 28.384 229 152 7 17 241 11 231 1.22e-13 70.9
Msa0620270 AT1G52340.1 29.358 218 145 4 48 259 21 235 1.51e-13 70.5
Msa0620270 AT3G05260.1 27.854 219 146 6 36 246 28 242 2.72e-13 69.7
Msa0620270 AT3G55310.1 25.854 205 144 5 45 242 17 220 1.08e-11 64.7
Msa0620270 AT2G30670.1 32.579 221 135 8 44 255 6 221 1.11e-11 64.7
Msa0620270 AT3G12800.1 41.463 82 47 1 50 131 15 95 2.39e-11 63.9
Msa0620270 AT1G62610.3 27.885 208 137 8 45 242 15 219 3.28e-11 63.5
Msa0620270 AT1G62610.1 27.885 208 137 8 45 242 14 218 3.64e-11 63.2
Msa0620270 AT1G62610.2 27.885 208 137 8 45 242 13 217 3.79e-11 63.2
Msa0620270 AT1G62610.4 27.885 208 137 8 45 242 19 223 3.80e-11 63.2
Msa0620270 AT3G29250.3 28.251 223 152 5 45 264 42 259 4.96e-11 63.2
Msa0620270 AT3G29250.1 28.000 225 154 5 43 264 42 261 5.27e-11 63.2
Msa0620270 AT2G47130.1 27.363 201 137 5 45 242 6 200 9.02e-11 62.0

Find 106 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATATAGCTTACCATAAT+TGG 0.149058 4_2:-71682128 None:intergenic
GTAAATAATGCAGGAGTTTC+TGG 0.163110 4_2:+71682059 Msa0620270:CDS
GCCTGGCCTGTTTATTAAAA+AGG 0.176500 4_2:+71684216 Msa0620270:three_prime_UTR
ATTCACAGGATACAAATTTC+TGG 0.215325 4_2:+71683181 Msa0620270:intron
TGAATATCCTCTATCAAAAT+TGG 0.229535 4_2:-71682086 None:intergenic
ACTCTTAGTGTTTAAATCTA+TGG 0.267784 4_2:+71684004 Msa0620270:three_prime_UTR
GCAAATTGCACTCATTGTTT+TGG 0.268738 4_2:-71680672 None:intergenic
AACTAAATACAATCCAATTA+TGG 0.273832 4_2:+71682115 Msa0620270:CDS
ACAATATAGACCCTAGTCTA+AGG 0.294072 4_2:-71684086 None:intergenic
TGGGCAGAACGACACATCTT+TGG 0.310099 4_2:+71683858 Msa0620270:CDS
TGGTCTAATATGATGGGGTT+AGG 0.319464 4_2:+71684131 Msa0620270:three_prime_UTR
AGAAAAGGTAACATGATGAT+AGG 0.329910 4_2:-71680740 None:intergenic
AATAGGCCATGCCGGCCTAC+AGG 0.330765 4_2:+71684160 Msa0620270:three_prime_UTR
TCCCCTGATGTTACTATCAT+TGG 0.348900 4_2:+71681856 Msa0620270:CDS
TTAATTGAGTATTAGATGAT+TGG 0.365949 4_2:+71684111 Msa0620270:three_prime_UTR
TCTTGTAGCAGTGGCTGATA+TGG 0.366276 4_2:+71681819 Msa0620270:CDS
AGGCCAGGCCAGACTTAAAC+AGG 0.378537 4_2:-71684197 None:intergenic
AACGACACATCTTTGGGCTT+TGG 0.381249 4_2:+71683865 Msa0620270:CDS
TGTATGTGACAAACCCTTCA+TGG 0.382578 4_2:+71683787 Msa0620270:CDS
TGTTTAAGTCTGGCCTGGCC+TGG 0.383301 4_2:+71684199 Msa0620270:three_prime_UTR
GGGCAGAACGACACATCTTT+GGG 0.386518 4_2:+71683859 Msa0620270:CDS
CAAAACAAATATGGCATTGA+AGG 0.386732 4_2:+71683556 Msa0620270:CDS
GGTGCTTTATCCTGAGTTAG+TGG 0.387203 4_2:+71683833 Msa0620270:CDS
ACTGGGGCAGCCTCAGGAAT+TGG 0.397319 4_2:+71681159 Msa0620270:CDS
CAGGATCATAGTGGTTGCTT+CGG 0.397364 4_2:+71683257 Msa0620270:CDS
AATATGATGGGGTTAGGGTT+GGG 0.400102 4_2:+71684137 Msa0620270:three_prime_UTR
CCGCTTACTGTCTTCAACCT+TGG 0.411546 4_2:-71681890 None:intergenic
AATTTCTGGGGAGCAGTTCA+TGG 0.418408 4_2:+71683195 Msa0620270:CDS
GCCTACAGGGGCCTACGGTC+TGG 0.419696 4_2:+71684174 Msa0620270:three_prime_UTR
TTCACAGGATACAAATTTCT+GGG 0.420623 4_2:+71683182 Msa0620270:intron
GCAAAAGCCTTCTTGTAAGA+AGG 0.427375 4_2:+71683887 Msa0620270:CDS
GGTCTAATATGATGGGGTTA+GGG 0.427491 4_2:+71684132 Msa0620270:three_prime_UTR
ATTGAACTTGGTTGGACCAT+TGG 0.429928 4_2:+71683506 Msa0620270:CDS
TGGCCTGTTTAAGTCTGGCC+TGG 0.435902 4_2:+71684194 Msa0620270:three_prime_UTR
CGGTCTGGCCTGTTTAAGTC+TGG 0.440467 4_2:+71684189 Msa0620270:three_prime_UTR
ATAGGCCATGCCGGCCTACA+GGG 0.445586 4_2:+71684161 Msa0620270:three_prime_UTR
TTTAATAAACAGGCCAGGCC+AGG 0.445700 4_2:-71684212 None:intergenic
TAATATGATGGGGTTAGGGT+TGG 0.449931 4_2:+71684136 Msa0620270:three_prime_UTR
AGATGATTGGTCTAATATGA+TGG 0.453795 4_2:+71684124 Msa0620270:three_prime_UTR
TTATGTGTACCCTTAGACTA+GGG 0.454797 4_2:+71684076 Msa0620270:three_prime_UTR
TTATCCTGAGTTAGTGGACT+GGG 0.457624 4_2:+71683839 Msa0620270:CDS
CTCTAAGAATTGAACTTGGT+TGG 0.459501 4_2:+71683498 Msa0620270:CDS
ATGGGGTTAGGGTTGGGAAT+AGG 0.466969 4_2:+71684143 Msa0620270:three_prime_UTR
GACCGTAGGCCCCTGTAGGC+CGG 0.469336 4_2:-71684171 None:intergenic
GATGAAACAATCAAACACTT+TGG 0.473040 4_2:+71681919 Msa0620270:CDS
CTAATCACTGGGGCAGCCTC+AGG 0.473197 4_2:+71681153 Msa0620270:CDS
AGGATCATAGTGGTTGCTTC+GGG 0.474071 4_2:+71683258 Msa0620270:CDS
TCAGGATAAAGCACCTGAAA+AGG 0.475371 4_2:-71683825 None:intergenic
AACATCACTTTGAGCCATGA+AGG 0.478716 4_2:-71683801 None:intergenic
GATGATTGGTCTAATATGAT+GGG 0.480461 4_2:+71684125 Msa0620270:three_prime_UTR
ATAGTGGTTGCTTCGGGTTG+TGG 0.481789 4_2:+71683264 Msa0620270:CDS
GGATCGAAATCAGTGACAAT+GGG 0.482174 4_2:-71680718 None:intergenic
TAGAGACTTAATCTTGGAAG+TGG 0.486255 4_2:-71683294 None:intergenic
AGCAATTTGACGAAAAGAAA+AGG 0.488892 4_2:-71680755 None:intergenic
ACATTATAGAGACTTAATCT+TGG 0.493027 4_2:-71683300 None:intergenic
ATTATGGTATCAGGCTAGTA+AGG 0.497359 4_2:+71683451 Msa0620270:intron
GCACCAATGATAGTAACATC+AGG 0.503443 4_2:-71681859 None:intergenic
GTTTCATGCAGTGGATCATC+TGG 0.506526 4_2:+71682037 Msa0620270:intron
CGGAGGGAGTACTAATCACT+GGG 0.512881 4_2:+71681142 Msa0620270:intron
CATTCATTTGCTGATCCCAA+TGG 0.513399 4_2:-71683726 None:intergenic
GGCATTACAATCGTCACACC+TGG 0.515479 4_2:+71683527 Msa0620270:CDS
GAAAAGGTAACATGATGATA+GGG 0.516275 4_2:-71680739 None:intergenic
CATTGGTGCAGATGTTTCCA+AGG 0.517111 4_2:+71681873 Msa0620270:CDS
GATCATCTGGTAAATAATGC+AGG 0.522085 4_2:+71682050 Msa0620270:CDS
TAGTCTGCAATGCATTCCAT+TGG 0.525080 4_2:+71683710 Msa0620270:CDS
ACGGAGGGAGTACTAATCAC+TGG 0.525772 4_2:+71681141 Msa0620270:intron
TGCCGGCCTACAGGGGCCTA+CGG 0.531164 4_2:+71684169 Msa0620270:three_prime_UTR
GCTGATATGGCAACATCCCT+TGG 0.533765 4_2:+71681832 Msa0620270:CDS
CAAAAGCCTTCTTGTAAGAA+GGG 0.535473 4_2:+71683888 Msa0620270:CDS
TTTATCCTGAGTTAGTGGAC+TGG 0.536192 4_2:+71683838 Msa0620270:CDS
TAGGCCCCTGTAGGCCGGCA+TGG 0.537117 4_2:-71684166 None:intergenic
TTTATGTGTACCCTTAGACT+AGG 0.543214 4_2:+71684075 Msa0620270:three_prime_UTR
AGTCTGCAATGCATTCCATT+GGG 0.547551 4_2:+71683711 Msa0620270:CDS
GAGACTCTAAGAATTGAACT+TGG 0.549331 4_2:+71683494 Msa0620270:CDS
TGGTTGCTTCGGGTTGTGGA+TGG 0.554870 4_2:+71683268 Msa0620270:CDS
AGATCGCCCTTCTTACAAGA+AGG 0.555115 4_2:-71683894 None:intergenic
GGGATCGAAATCAGTGACAA+TGG 0.561465 4_2:-71680719 None:intergenic
CTTGGTGCACACAGAAAGCA+TGG 0.570391 4_2:+71680793 Msa0620270:CDS
TAGGCCATGCCGGCCTACAG+GGG 0.579585 4_2:+71684162 Msa0620270:three_prime_UTR
CAATATAGACCCTAGTCTAA+GGG 0.591708 4_2:-71684085 None:intergenic
CACCAATGATAGTAACATCA+GGG 0.594536 4_2:-71681858 None:intergenic
ACATCACTTTGAGCCATGAA+GGG 0.597072 4_2:-71683800 None:intergenic
ATAAGACAAAATTACTCTCG+TGG 0.605015 4_2:+71683956 Msa0620270:exon
CCAAGGTTGAAGACAGTAAG+CGG 0.605037 4_2:+71681890 Msa0620270:CDS
GGGTTGGGAATAGGCCATGC+CGG 0.605568 4_2:+71684152 Msa0620270:three_prime_UTR
TCTGCCCAGTCCACTAACTC+AGG 0.607396 4_2:-71683843 None:intergenic
AGAGACTTAATCTTGGAAGT+GGG 0.610882 4_2:-71683293 None:intergenic
AGTAACATCAGGGGAACCAA+GGG 0.611098 4_2:-71681848 None:intergenic
AAAAGAGAATCTTGTAGCAG+TGG 0.617226 4_2:+71681810 Msa0620270:CDS
ATTATTCTGTCTTAAGCACG+TGG 0.620818 4_2:-71683935 None:intergenic
GCTTATGAGTATGCTAAGAG+AGG 0.621046 4_2:+71681760 Msa0620270:CDS
TAGTAACATCAGGGGAACCA+AGG 0.622054 4_2:-71681849 None:intergenic
CAGCAAAGGCAGGATCATAG+TGG 0.623837 4_2:+71683248 Msa0620270:CDS
TCACAGGATACAAATTTCTG+GGG 0.631294 4_2:+71683183 Msa0620270:intron
ATGATTGGTCTAATATGATG+GGG 0.634277 4_2:+71684126 Msa0620270:three_prime_UTR
GCCAGACCGTAGGCCCCTGT+AGG 0.651838 4_2:-71684175 None:intergenic
GAGTACCTCGCCAATTCCTG+AGG 0.653628 4_2:-71681169 None:intergenic
GGCAGCCTCAGGAATTGGCG+AGG 0.661286 4_2:+71681164 Msa0620270:CDS
GATCGAAATCAGTGACAATG+GGG 0.665333 4_2:-71680717 None:intergenic
ACTTAAACAGGCCAGACCGT+AGG 0.667799 4_2:-71684185 None:intergenic
ATCGAAATCAGTGACAATGG+GGG 0.699761 4_2:-71680716 None:intergenic
TGTGACGATTGTAATGCCAA+TGG 0.709012 4_2:-71683522 None:intergenic
ATTGAAGGCATATGAAGACG+AGG 0.713291 4_2:+71683571 Msa0620270:CDS
ACCAATGATAGTAACATCAG+GGG 0.719017 4_2:-71681857 None:intergenic
AGTATGCTAAGAGAGGAGCA+AGG 0.743793 4_2:+71681767 Msa0620270:CDS
GGAGGGAGTACTAATCACTG+GGG 0.822816 4_2:+71681143 Msa0620270:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATGAAAAAAAGATTT+AGG - chr4_2:71681593-71681612 None:intergenic 10.0%
!!! TTTTAACTTTTTATTTTCTT+CGG + chr4_2:71684041-71684060 Msa0620270:three_prime_UTR 10.0%
!!! GATTTTTTTGCTTATATTTT+AGG - chr4_2:71680843-71680862 None:intergenic 15.0%
!! CACAATAATAACATAAAAAT+TGG - chr4_2:71680901-71680920 None:intergenic 15.0%
!!! ACATGCATTTAATTTTATAT+TGG - chr4_2:71680947-71680966 None:intergenic 15.0%
!!! TTTTTGCTTATAAAAAAAGA+CGG + chr4_2:71681122-71681141 Msa0620270:intron 15.0%
!! ATAATGTTTAAAAATAAGTG+AGG - chr4_2:71681408-71681427 None:intergenic 15.0%
!!! CACTTATTTTTAAACATTAT+TGG + chr4_2:71681408-71681427 Msa0620270:intron 15.0%
!! AATTTCTTGATAAAATCTAA+GGG - chr4_2:71682299-71682318 None:intergenic 15.0%
!! CTAAATGAAGAATAAAATAA+AGG - chr4_2:71682576-71682595 None:intergenic 15.0%
!! TTTCTTTAGTAAAAAAAAGA+AGG - chr4_2:71682635-71682654 None:intergenic 15.0%
!!! TCTTTTTTTTACTAAAGAAA+AGG + chr4_2:71682635-71682654 Msa0620270:intron 15.0%
!!! AAATTAAACTGATTTTTTGA+AGG + chr4_2:71682749-71682768 Msa0620270:intron 15.0%
!!! ATGGGATTTTTTTTTTTTTA+GGG - chr4_2:71682812-71682831 None:intergenic 15.0%
!!! AATGGGATTTTTTTTTTTTT+AGG - chr4_2:71682813-71682832 None:intergenic 15.0%
!! ATATATACCTATATCTAAAT+GGG - chr4_2:71682830-71682849 None:intergenic 15.0%
!! TATATATACCTATATCTAAA+TGG - chr4_2:71682831-71682850 None:intergenic 15.0%
!!! TTTTTGCTTATATTTTAGGA+CGG - chr4_2:71680839-71680858 None:intergenic 20.0%
!!! TTCTCATTGGTTAAAAATTA+TGG - chr4_2:71681001-71681020 None:intergenic 20.0%
!! GATGTAAAAATAATTCTCAT+TGG - chr4_2:71681014-71681033 None:intergenic 20.0%
!!! ACTCCATTAATAATCTATTT+TGG + chr4_2:71681197-71681216 Msa0620270:intron 20.0%
!! TCACCAAAATAGATTATTAA+TGG - chr4_2:71681203-71681222 None:intergenic 20.0%
!! ACTATACCAAATAAAACTTT+AGG + chr4_2:71681678-71681697 Msa0620270:intron 20.0%
!! CTATACCAAATAAAACTTTA+GGG + chr4_2:71681679-71681698 Msa0620270:intron 20.0%
!! TATACCAAATAAAACTTTAG+GGG + chr4_2:71681680-71681699 Msa0620270:intron 20.0%
!!! ATAAAACCTTTCTCTAAAAA+AGG + chr4_2:71681732-71681751 Msa0620270:intron 20.0%
!! AACTAAATACAATCCAATTA+TGG + chr4_2:71682115-71682134 Msa0620270:CDS 20.0%
!!! ATCATTGCTCTTTTTTTAAA+TGG - chr4_2:71682185-71682204 None:intergenic 20.0%
!! CAATTTCTTGATAAAATCTA+AGG - chr4_2:71682300-71682319 None:intergenic 20.0%
!! AAAAAATCCCATTTAGATAT+AGG + chr4_2:71682820-71682839 Msa0620270:intron 20.0%
!! TATTTAACAAAACCTATGAT+CGG + chr4_2:71682933-71682952 Msa0620270:intron 20.0%
!! TAGTTATATACTATGATACA+AGG + chr4_2:71682999-71683018 Msa0620270:intron 20.0%
!!! ACAGTTTAAGACTATTATTT+TGG - chr4_2:71683421-71683440 None:intergenic 20.0%
!!! ATATTTGTTTTGATAAAACC+AGG - chr4_2:71683548-71683567 None:intergenic 20.0%
!!! TGGTTTTATCAAAACAAATA+TGG + chr4_2:71683547-71683566 Msa0620270:CDS 20.0%
!! AAGTTAAAAACATAAGTGAA+GGG - chr4_2:71684030-71684049 None:intergenic 20.0%
!! AAAGTTAAAAACATAAGTGA+AGG - chr4_2:71684031-71684050 None:intergenic 20.0%
!! TTAATTGAGTATTAGATGAT+TGG + chr4_2:71684111-71684130 Msa0620270:three_prime_UTR 20.0%
! GCTTATTTATGCAAAAAACT+TGG + chr4_2:71680775-71680794 Msa0620270:CDS 25.0%
!!! ATAATTTTTTGTGTTCTCCT+TGG - chr4_2:71681054-71681073 None:intergenic 25.0%
! AATCTCATTGCTTAAAAATC+AGG + chr4_2:71681485-71681504 Msa0620270:intron 25.0%
!!! GTTTTATTAGCAACATTAAC+TGG - chr4_2:71681719-71681738 None:intergenic 25.0%
! TGAATATCCTCTATCAAAAT+TGG - chr4_2:71682089-71682108 None:intergenic 25.0%
! AACATATAGCTTACCATAAT+TGG - chr4_2:71682131-71682150 None:intergenic 25.0%
! ATATGTTCTGCTTCAATTAA+TGG + chr4_2:71682144-71682163 Msa0620270:intron 25.0%
!! TATTGGCTAACATTAATTTC+AGG - chr4_2:71682324-71682343 None:intergenic 25.0%
!!! ATTGCACTCTGTTTTTTTTA+AGG - chr4_2:71682482-71682501 None:intergenic 25.0%
!! TAATATCTAAAATCCCAATG+CGG + chr4_2:71682849-71682868 Msa0620270:intron 25.0%
! TAGCTACCTAAACTTTAATT+TGG - chr4_2:71682877-71682896 None:intergenic 25.0%
! TTAAAGTTTAGGTAGCTATT+AGG + chr4_2:71682879-71682898 Msa0620270:intron 25.0%
! ATAAAATCATGAATGACCAA+GGG - chr4_2:71683049-71683068 None:intergenic 25.0%
! TATAAAATCATGAATGACCA+AGG - chr4_2:71683050-71683069 None:intergenic 25.0%
! AATTGAACTACATCAAAAGT+CGG + chr4_2:71683104-71683123 Msa0620270:intron 25.0%
! CTTAATAACTATCTCAAAAG+TGG + chr4_2:71683138-71683157 Msa0620270:intron 25.0%
! ACATTATAGAGACTTAATCT+TGG - chr4_2:71683303-71683322 None:intergenic 25.0%
! AACTGTGATTATATGCATTA+TGG + chr4_2:71683435-71683454 Msa0620270:intron 25.0%
! ATTATATGCATTATGGTATC+AGG + chr4_2:71683442-71683461 Msa0620270:intron 25.0%
! TTGGTTGAGGTTTAAATTAA+AGG - chr4_2:71683631-71683650 None:intergenic 25.0%
! TTCACAACATTAACTATTGT+AGG + chr4_2:71683686-71683705 Msa0620270:intron 25.0%
! ACTCTTAGTGTTTAAATCTA+TGG + chr4_2:71684004-71684023 Msa0620270:three_prime_UTR 25.0%
!!! ATTGTTTTGGGAGATTTGAT+TGG - chr4_2:71680662-71680681 None:intergenic 30.0%
! CAAATTGCACTCATTGTTTT+GGG - chr4_2:71680674-71680693 None:intergenic 30.0%
GAAAAGGTAACATGATGATA+GGG - chr4_2:71680742-71680761 None:intergenic 30.0%
AGAAAAGGTAACATGATGAT+AGG - chr4_2:71680743-71680762 None:intergenic 30.0%
AGCAATTTGACGAAAAGAAA+AGG - chr4_2:71680758-71680777 None:intergenic 30.0%
TTTCCATGAAACTTATTCCA+AGG + chr4_2:71681034-71681053 Msa0620270:intron 30.0%
TACCTCAAATCACTAAGTAT+TGG + chr4_2:71681073-71681092 Msa0620270:intron 30.0%
AACCAATACTTAGTGATTTG+AGG - chr4_2:71681078-71681097 None:intergenic 30.0%
TTGCTTATAAAAAAAGACGG+AGG + chr4_2:71681125-71681144 Msa0620270:intron 30.0%
TGCTTATAAAAAAAGACGGA+GGG + chr4_2:71681126-71681145 Msa0620270:intron 30.0%
! TATATCCACATTTTTCTCGT+AGG - chr4_2:71681237-71681256 None:intergenic 30.0%
TAAAAATCAGTCGCAATAGT+TGG + chr4_2:71681304-71681323 Msa0620270:intron 30.0%
AACTTCTTATCAACTGAACA+AGG - chr4_2:71681439-71681458 None:intergenic 30.0%
ATCTCCATCAATTCTCTATA+CGG + chr4_2:71681521-71681540 Msa0620270:intron 30.0%
!!! ATGTCCCCTAAAGTTTTATT+TGG - chr4_2:71681687-71681706 None:intergenic 30.0%
!!! CTAGTTCCTTTTTTAGAGAA+AGG - chr4_2:71681741-71681760 None:intergenic 30.0%
GATGAAACAATCAAACACTT+TGG + chr4_2:71681919-71681938 Msa0620270:CDS 30.0%
AGAAAGATTCAAGAATGACA+TGG + chr4_2:71682262-71682281 Msa0620270:intron 30.0%
AGAAAGATTCAAGAATGACA+TGG - chr4_2:71682262-71682281 None:intergenic 30.0%
! TCGGTTGGAAAACATTTTTA+AGG + chr4_2:71682952-71682971 Msa0620270:intron 30.0%
CTGCTTAGATATTAACTTCA+TGG + chr4_2:71683075-71683094 Msa0620270:intron 30.0%
! CACTTTTAGTGTTTATTCAC+AGG + chr4_2:71683167-71683186 Msa0620270:intron 30.0%
ATTCACAGGATACAAATTTC+TGG + chr4_2:71683181-71683200 Msa0620270:intron 30.0%
TTCACAGGATACAAATTTCT+GGG + chr4_2:71683182-71683201 Msa0620270:intron 30.0%
! CAAAACAAATATGGCATTGA+AGG + chr4_2:71683556-71683575 Msa0620270:CDS 30.0%
GTTGAGGTTTAAATTAAAGG+AGG - chr4_2:71683628-71683647 None:intergenic 30.0%
ATAAGACAAAATTACTCTCG+TGG + chr4_2:71683956-71683975 Msa0620270:exon 30.0%
!! AGATGATTGGTCTAATATGA+TGG + chr4_2:71684124-71684143 Msa0620270:three_prime_UTR 30.0%
!! GATGATTGGTCTAATATGAT+GGG + chr4_2:71684125-71684144 Msa0620270:three_prime_UTR 30.0%
!! ATGATTGGTCTAATATGATG+GGG + chr4_2:71684126-71684145 Msa0620270:three_prime_UTR 30.0%
! GCAAATTGCACTCATTGTTT+TGG - chr4_2:71680675-71680694 None:intergenic 35.0%
!!! TGCTTATATTTTAGGACGGA+GGG - chr4_2:71680835-71680854 None:intergenic 35.0%
!!! TTGCTTATATTTTAGGACGG+AGG - chr4_2:71680836-71680855 None:intergenic 35.0%
TCTCCTTGGAATAAGTTTCA+TGG - chr4_2:71681040-71681059 None:intergenic 35.0%
TCATACCTACGAGAAAAATG+TGG + chr4_2:71681229-71681248 Msa0620270:intron 35.0%
GCATCATATGCACACAAAAA+AGG + chr4_2:71681356-71681375 Msa0620270:intron 35.0%
TCTTATCAACTGAACAAGGT+CGG - chr4_2:71681435-71681454 None:intergenic 35.0%
CAAACCGTATAGAGAATTGA+TGG - chr4_2:71681528-71681547 None:intergenic 35.0%
AAAAGAGAATCTTGTAGCAG+TGG + chr4_2:71681810-71681829 Msa0620270:CDS 35.0%
ACCAATGATAGTAACATCAG+GGG - chr4_2:71681860-71681879 None:intergenic 35.0%
CACCAATGATAGTAACATCA+GGG - chr4_2:71681861-71681880 None:intergenic 35.0%
AAATTGTGTGTTTCATGCAG+TGG + chr4_2:71682028-71682047 Msa0620270:intron 35.0%
GATCATCTGGTAAATAATGC+AGG + chr4_2:71682050-71682069 Msa0620270:CDS 35.0%
GTAAATAATGCAGGAGTTTC+TGG + chr4_2:71682059-71682078 Msa0620270:CDS 35.0%
!! TGGCATTCCAATTTTGATAG+AGG + chr4_2:71682079-71682098 Msa0620270:CDS 35.0%
! TCTGCTTCAATTAATGGACA+TGG + chr4_2:71682150-71682169 Msa0620270:intron 35.0%
CAATAAAATCTCAGCATGAC+CGG + chr4_2:71682339-71682358 Msa0620270:intron 35.0%
! TACCATACACATTCTAGAGA+TGG + chr4_2:71682508-71682527 Msa0620270:intron 35.0%
!! AACCATCTCTAGAATGTGTA+TGG - chr4_2:71682513-71682532 None:intergenic 35.0%
AAGTTAGCAAGCTCATCTTT+GGG + chr4_2:71682909-71682928 Msa0620270:intron 35.0%
TAACAAAACCTATGATCGGT+TGG + chr4_2:71682937-71682956 Msa0620270:intron 35.0%
! AATGTTTTCCAACCGATCAT+AGG - chr4_2:71682948-71682967 None:intergenic 35.0%
! AATACGTAGCATTTTTCCCT+TGG + chr4_2:71683030-71683049 Msa0620270:intron 35.0%
TCACAGGATACAAATTTCTG+GGG + chr4_2:71683183-71683202 Msa0620270:intron 35.0%
!!! CTTTGCTGTTTTTGAGATGT+GGG - chr4_2:71683236-71683255 None:intergenic 35.0%
AGAGACTTAATCTTGGAAGT+GGG - chr4_2:71683296-71683315 None:intergenic 35.0%
TAGAGACTTAATCTTGGAAG+TGG - chr4_2:71683297-71683316 None:intergenic 35.0%
ATTATGGTATCAGGCTAGTA+AGG + chr4_2:71683451-71683470 Msa0620270:intron 35.0%
! GAGACTCTAAGAATTGAACT+TGG + chr4_2:71683494-71683513 Msa0620270:CDS 35.0%
! CTCTAAGAATTGAACTTGGT+TGG + chr4_2:71683498-71683517 Msa0620270:CDS 35.0%
! AGGAGGTGTAATATTATGCT+TGG - chr4_2:71683611-71683630 None:intergenic 35.0%
!! CGCACTTTTTACTATGTCTT+TGG - chr4_2:71683754-71683773 None:intergenic 35.0%
! CAAAGTGATGTTTCCTTTTC+AGG + chr4_2:71683812-71683831 Msa0620270:CDS 35.0%
CAAAAGCCTTCTTGTAAGAA+GGG + chr4_2:71683888-71683907 Msa0620270:CDS 35.0%
ATTATTCTGTCTTAAGCACG+TGG - chr4_2:71683938-71683957 None:intergenic 35.0%
TTTATGTGTACCCTTAGACT+AGG + chr4_2:71684075-71684094 Msa0620270:three_prime_UTR 35.0%
TTATGTGTACCCTTAGACTA+GGG + chr4_2:71684076-71684095 Msa0620270:three_prime_UTR 35.0%
CAATATAGACCCTAGTCTAA+GGG - chr4_2:71684088-71684107 None:intergenic 35.0%
ACAATATAGACCCTAGTCTA+AGG - chr4_2:71684089-71684108 None:intergenic 35.0%
GCCTGTTTATTAAAAAGGCT+AGG + chr4_2:71684221-71684240 Msa0620270:three_prime_UTR 35.0%
!! GCCTAGCCTTTTTAATAAAC+AGG - chr4_2:71684225-71684244 None:intergenic 35.0%
ATCGAAATCAGTGACAATGG+GGG - chr4_2:71680719-71680738 None:intergenic 40.0%
GATCGAAATCAGTGACAATG+GGG - chr4_2:71680720-71680739 None:intergenic 40.0%
GGATCGAAATCAGTGACAAT+GGG - chr4_2:71680721-71680740 None:intergenic 40.0%
GCATATGATGCCTTACCTTT+GGG - chr4_2:71681347-71681366 None:intergenic 40.0%
TGCATATGATGCCTTACCTT+TGG - chr4_2:71681348-71681367 None:intergenic 40.0%
GCTTATGAGTATGCTAAGAG+AGG + chr4_2:71681760-71681779 Msa0620270:CDS 40.0%
TCCCCTGATGTTACTATCAT+TGG + chr4_2:71681856-71681875 Msa0620270:CDS 40.0%
GCACCAATGATAGTAACATC+AGG - chr4_2:71681862-71681881 None:intergenic 40.0%
! CGGTCATGCTGAGATTTTAT+TGG - chr4_2:71682341-71682360 None:intergenic 40.0%
!! CTTTAATTTGGCTCCGCATT+GGG - chr4_2:71682865-71682884 None:intergenic 40.0%
!! ACTTTAATTTGGCTCCGCAT+TGG - chr4_2:71682866-71682885 None:intergenic 40.0%
GCGGAGCCAAATTAAAGTTT+AGG + chr4_2:71682868-71682887 Msa0620270:intron 40.0%
CAAGTTAGCAAGCTCATCTT+TGG + chr4_2:71682908-71682927 Msa0620270:intron 40.0%
!!! CCTTTGCTGTTTTTGAGATG+TGG - chr4_2:71683237-71683256 None:intergenic 40.0%
CCACATCTCAAAAACAGCAA+AGG + chr4_2:71683234-71683253 Msa0620270:CDS 40.0%
ATCTCAAAAACAGCAAAGGC+AGG + chr4_2:71683238-71683257 Msa0620270:CDS 40.0%
ATTGAACTTGGTTGGACCAT+TGG + chr4_2:71683506-71683525 Msa0620270:CDS 40.0%
TGTGACGATTGTAATGCCAA+TGG - chr4_2:71683525-71683544 None:intergenic 40.0%
! ATTGAAGGCATATGAAGACG+AGG + chr4_2:71683571-71683590 Msa0620270:CDS 40.0%
!! AGTGTAAACTGCATTGGTTG+AGG - chr4_2:71683644-71683663 None:intergenic 40.0%
CACAGTAGTGTAAACTGCAT+TGG - chr4_2:71683650-71683669 None:intergenic 40.0%
TAGTCTGCAATGCATTCCAT+TGG + chr4_2:71683710-71683729 Msa0620270:CDS 40.0%
AGTCTGCAATGCATTCCATT+GGG + chr4_2:71683711-71683730 Msa0620270:CDS 40.0%
! CATTCATTTGCTGATCCCAA+TGG - chr4_2:71683729-71683748 None:intergenic 40.0%
! ACATAGTAAAAAGTGCGTGC+AGG + chr4_2:71683757-71683776 Msa0620270:CDS 40.0%
! CATAGTAAAAAGTGCGTGCA+GGG + chr4_2:71683758-71683777 Msa0620270:CDS 40.0%
! ATAGTAAAAAGTGCGTGCAG+GGG + chr4_2:71683759-71683778 Msa0620270:CDS 40.0%
TGTATGTGACAAACCCTTCA+TGG + chr4_2:71683787-71683806 Msa0620270:CDS 40.0%
ACATCACTTTGAGCCATGAA+GGG - chr4_2:71683803-71683822 None:intergenic 40.0%
AACATCACTTTGAGCCATGA+AGG - chr4_2:71683804-71683823 None:intergenic 40.0%
! TCAGGATAAAGCACCTGAAA+AGG - chr4_2:71683828-71683847 None:intergenic 40.0%
! TTTATCCTGAGTTAGTGGAC+TGG + chr4_2:71683838-71683857 Msa0620270:CDS 40.0%
!! TTATCCTGAGTTAGTGGACT+GGG + chr4_2:71683839-71683858 Msa0620270:CDS 40.0%
GCAAAAGCCTTCTTGTAAGA+AGG + chr4_2:71683887-71683906 Msa0620270:CDS 40.0%
! TGGTCTAATATGATGGGGTT+AGG + chr4_2:71684131-71684150 Msa0620270:three_prime_UTR 40.0%
! GGTCTAATATGATGGGGTTA+GGG + chr4_2:71684132-71684151 Msa0620270:three_prime_UTR 40.0%
! TAATATGATGGGGTTAGGGT+TGG + chr4_2:71684136-71684155 Msa0620270:three_prime_UTR 40.0%
! AATATGATGGGGTTAGGGTT+GGG + chr4_2:71684137-71684156 Msa0620270:three_prime_UTR 40.0%
GCCTGGCCTGTTTATTAAAA+AGG + chr4_2:71684216-71684235 Msa0620270:three_prime_UTR 40.0%
! GCCTTTTTAATAAACAGGCC+AGG - chr4_2:71684220-71684239 None:intergenic 40.0%
GGGATCGAAATCAGTGACAA+TGG - chr4_2:71680722-71680741 None:intergenic 45.0%
! CAATAGTTGGTTCCGTTGCA+GGG + chr4_2:71681317-71681336 Msa0620270:intron 45.0%
ATGATGCCTTACCTTTGGGT+CGG - chr4_2:71681343-71681362 None:intergenic 45.0%
AGTATGCTAAGAGAGGAGCA+AGG + chr4_2:71681767-71681786 Msa0620270:CDS 45.0%
TCTTGTAGCAGTGGCTGATA+TGG + chr4_2:71681819-71681838 Msa0620270:CDS 45.0%
AGTAACATCAGGGGAACCAA+GGG - chr4_2:71681851-71681870 None:intergenic 45.0%
TAGTAACATCAGGGGAACCA+AGG - chr4_2:71681852-71681871 None:intergenic 45.0%
CATTGGTGCAGATGTTTCCA+AGG + chr4_2:71681873-71681892 Msa0620270:CDS 45.0%
CCAAGGTTGAAGACAGTAAG+CGG + chr4_2:71681890-71681909 Msa0620270:CDS 45.0%
TGGACGATGTATGTGACTGT+TGG + chr4_2:71681939-71681958 Msa0620270:intron 45.0%
GTTTCATGCAGTGGATCATC+TGG + chr4_2:71682037-71682056 Msa0620270:intron 45.0%
TCAGCATGACCGGAAATCAT+GGG + chr4_2:71682349-71682368 Msa0620270:intron 45.0%
! AATTTCTGGGGAGCAGTTCA+TGG + chr4_2:71683195-71683214 Msa0620270:CDS 45.0%
CAGGATCATAGTGGTTGCTT+CGG + chr4_2:71683257-71683276 Msa0620270:CDS 45.0%
AGGATCATAGTGGTTGCTTC+GGG + chr4_2:71683258-71683277 Msa0620270:CDS 45.0%
AAGGCATATGAAGACGAGGT+CGG + chr4_2:71683575-71683594 Msa0620270:intron 45.0%
GGTGCTTTATCCTGAGTTAG+TGG + chr4_2:71683833-71683852 Msa0620270:CDS 45.0%
AACGACACATCTTTGGGCTT+TGG + chr4_2:71683865-71683884 Msa0620270:CDS 45.0%
AGATCGCCCTTCTTACAAGA+AGG - chr4_2:71683897-71683916 None:intergenic 45.0%
TTTAATAAACAGGCCAGGCC+AGG - chr4_2:71684215-71684234 None:intergenic 45.0%
! CTTGGTGCACACAGAAAGCA+TGG + chr4_2:71680793-71680812 Msa0620270:CDS 50.0%
!! ACGGAGGGAGTACTAATCAC+TGG + chr4_2:71681141-71681160 Msa0620270:intron 50.0%
!! CGGAGGGAGTACTAATCACT+GGG + chr4_2:71681142-71681161 Msa0620270:intron 50.0%
!! GGAGGGAGTACTAATCACTG+GGG + chr4_2:71681143-71681162 Msa0620270:intron 50.0%
! GCAATAGTTGGTTCCGTTGC+AGG + chr4_2:71681316-71681335 Msa0620270:intron 50.0%
GCTGATATGGCAACATCCCT+TGG + chr4_2:71681832-71681851 Msa0620270:CDS 50.0%
CCGCTTACTGTCTTCAACCT+TGG - chr4_2:71681893-71681912 None:intergenic 50.0%
CTCAGCATGACCGGAAATCA+TGG + chr4_2:71682348-71682367 Msa0620270:intron 50.0%
CAGCATGACCGGAAATCATG+GGG + chr4_2:71682350-71682369 Msa0620270:intron 50.0%
! GTGGCGGGACTGAAATCTAA+GGG + chr4_2:71682391-71682410 Msa0620270:intron 50.0%
CAGCAAAGGCAGGATCATAG+TGG + chr4_2:71683248-71683267 Msa0620270:CDS 50.0%
!! ATAGTGGTTGCTTCGGGTTG+TGG + chr4_2:71683264-71683283 Msa0620270:CDS 50.0%
GGCATTACAATCGTCACACC+TGG + chr4_2:71683527-71683546 Msa0620270:CDS 50.0%
TGAAGACGAGGTCGGTCAAT+TGG + chr4_2:71683583-71683602 Msa0620270:intron 50.0%
TGGGCAGAACGACACATCTT+TGG + chr4_2:71683858-71683877 Msa0620270:CDS 50.0%
GGGCAGAACGACACATCTTT+GGG + chr4_2:71683859-71683878 Msa0620270:CDS 50.0%
ATGGGGTTAGGGTTGGGAAT+AGG + chr4_2:71684143-71684162 Msa0620270:three_prime_UTR 50.0%
ACTTAAACAGGCCAGACCGT+AGG - chr4_2:71684188-71684207 None:intergenic 50.0%
GAGTACCTCGCCAATTCCTG+AGG - chr4_2:71681172-71681191 None:intergenic 55.0%
CATGACCGGAAATCATGGGG+TGG + chr4_2:71682353-71682372 Msa0620270:intron 55.0%
ATGGGGTGGTGCGGAAATCA+TGG + chr4_2:71682367-71682386 Msa0620270:intron 55.0%
TGGGGTGGTGCGGAAATCAT+GGG + chr4_2:71682368-71682387 Msa0620270:intron 55.0%
!! GGTGGCGGGACTGAAATCTA+AGG + chr4_2:71682390-71682409 Msa0620270:intron 55.0%
!! TGGTTGCTTCGGGTTGTGGA+TGG + chr4_2:71683268-71683287 Msa0620270:CDS 55.0%
TCTGCCCAGTCCACTAACTC+AGG - chr4_2:71683846-71683865 None:intergenic 55.0%
CGGTCTGGCCTGTTTAAGTC+TGG + chr4_2:71684189-71684208 Msa0620270:three_prime_UTR 55.0%
TGGCCTGTTTAAGTCTGGCC+TGG + chr4_2:71684194-71684213 Msa0620270:three_prime_UTR 55.0%
AGGCCAGGCCAGACTTAAAC+AGG - chr4_2:71684200-71684219 None:intergenic 55.0%
TGTTTAAGTCTGGCCTGGCC+TGG + chr4_2:71684199-71684218 Msa0620270:three_prime_UTR 55.0%
CTAATCACTGGGGCAGCCTC+AGG + chr4_2:71681153-71681172 Msa0620270:CDS 60.0%
ACTGGGGCAGCCTCAGGAAT+TGG + chr4_2:71681159-71681178 Msa0620270:CDS 60.0%
CCGCACCACCCCATGATTTC+CGG - chr4_2:71682361-71682380 None:intergenic 60.0%
CCGGAAATCATGGGGTGGTG+CGG + chr4_2:71682358-71682377 Msa0620270:intron 60.0%
GGGGTGGTGCGGAAATCATG+GGG + chr4_2:71682369-71682388 Msa0620270:intron 60.0%
GTGGTGCGGAAATCATGGGG+TGG + chr4_2:71682372-71682391 Msa0620270:intron 60.0%
GTGCGGAAATCATGGGGTGG+CGG + chr4_2:71682375-71682394 Msa0620270:intron 60.0%
TGCGGAAATCATGGGGTGGC+GGG + chr4_2:71682376-71682395 Msa0620270:intron 60.0%
GGGTTGGGAATAGGCCATGC+CGG + chr4_2:71684152-71684171 Msa0620270:three_prime_UTR 60.0%
AATAGGCCATGCCGGCCTAC+AGG + chr4_2:71684160-71684179 Msa0620270:three_prime_UTR 60.0%
ATAGGCCATGCCGGCCTACA+GGG + chr4_2:71684161-71684180 Msa0620270:three_prime_UTR 60.0%
GGCAGCCTCAGGAATTGGCG+AGG + chr4_2:71681164-71681183 Msa0620270:CDS 65.0%
CCTTTGGGTCGGCCCTGCAA+CGG - chr4_2:71681332-71681351 None:intergenic 65.0%
GCAGGGCCGACCCAAAGGTA+AGG + chr4_2:71681334-71681353 Msa0620270:intron 65.0%
TAGGCCATGCCGGCCTACAG+GGG + chr4_2:71684162-71684181 Msa0620270:three_prime_UTR 65.0%
CCGTTGCAGGGCCGACCCAA+AGG + chr4_2:71681329-71681348 Msa0620270:intron 70.0%
TAGGCCCCTGTAGGCCGGCA+TGG - chr4_2:71684169-71684188 None:intergenic 70.0%
TGCCGGCCTACAGGGGCCTA+CGG + chr4_2:71684169-71684188 Msa0620270:three_prime_UTR 70.0%
GACCGTAGGCCCCTGTAGGC+CGG - chr4_2:71684174-71684193 None:intergenic 70.0%
GCCTACAGGGGCCTACGGTC+TGG + chr4_2:71684174-71684193 Msa0620270:three_prime_UTR 70.0%
GCCAGACCGTAGGCCCCTGT+AGG - chr4_2:71684178-71684197 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71680555 71684261 71680555 ID=Msa0620270;Name=Msa0620270
chr4_2 mRNA 71680555 71684261 71680555 ID=Msa0620270-mRNA-1;Parent=Msa0620270;Name=Msa0620270-mRNA-1;_AED=0.38;_eAED=0.38;_QI=125|1|1|1|0.66|0.71|7|305|324
chr4_2 exon 71680555 71680823 71680555 ID=Msa0620270-mRNA-1:exon:21212;Parent=Msa0620270-mRNA-1
chr4_2 exon 71681147 71681185 71681147 ID=Msa0620270-mRNA-1:exon:21213;Parent=Msa0620270-mRNA-1
chr4_2 exon 71681754 71681946 71681754 ID=Msa0620270-mRNA-1:exon:21214;Parent=Msa0620270-mRNA-1
chr4_2 exon 71682048 71682136 71682048 ID=Msa0620270-mRNA-1:exon:21215;Parent=Msa0620270-mRNA-1
chr4_2 exon 71683189 71683320 71683189 ID=Msa0620270-mRNA-1:exon:21216;Parent=Msa0620270-mRNA-1
chr4_2 exon 71683464 71683592 71683464 ID=Msa0620270-mRNA-1:exon:21217;Parent=Msa0620270-mRNA-1
chr4_2 exon 71683708 71684261 71683708 ID=Msa0620270-mRNA-1:exon:21218;Parent=Msa0620270-mRNA-1
chr4_2 five_prime_UTR 71680555 71680679 71680555 ID=Msa0620270-mRNA-1:five_prime_utr;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71680680 71680823 71680680 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71681147 71681185 71681147 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71681754 71681946 71681754 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71682048 71682136 71682048 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71683189 71683320 71683189 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71683464 71683592 71683464 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 CDS 71683708 71683956 71683708 ID=Msa0620270-mRNA-1:cds;Parent=Msa0620270-mRNA-1
chr4_2 three_prime_UTR 71683957 71684261 71683957 ID=Msa0620270-mRNA-1:three_prime_utr;Parent=Msa0620270-mRNA-1
Gene Sequence

>Msa0620270

ATGAGTGCAATTTGCAGCATACTGAATGTAGTATTGCCCCCATTGTCACTGATTTCGATCCCTATCATCATGTTACCTTTTCTTTTCGTCAAATTGCTTATTTATGCAAAAAACTTGGTGCACACAGAAAGCATGGAAAGAAAAGGAGTACTAATCACTGGGGCAGCCTCAGGAATTGGCGAGGAACTAGCTTATGAGTATGCTAAGAGAGGAGCAAGGTTGTCTCTAGTTGACATTCGAAAAGAGAATCTTGTAGCAGTGGCTGATATGGCAACATCCCTTGGTTCCCCTGATGTTACTATCATTGGTGCAGATGTTTCCAAGGTTGAAGACAGTAAGCGGTTTATTGATGAAACAATCAAACACTTTGGACGATTGGATCATCTGGTAAATAATGCAGGAGTTTCTGGCATTCCAATTTTGATAGAGGATATTCATGATTTAACTAAATACAATCCAATTATGGATACAAATTTCTGGGGAGCAGTTCATGGCACTCTATATGCAATCCCACATCTCAAAAACAGCAAAGGCAGGATCATAGTGGTTGCTTCGGGTTGTGGATGGTTCCCACTTCCAAGATTAAGTCTCTATAATGCTAGTAAGGCTGCGACAATAAGCTTCTTTGAGACTCTAAGAATTGAACTTGGTTGGACCATTGGCATTACAATCGTCACACCTGGTTTTATCAAAACAAATATGGCATTGAAGGCATATGAAGACGAGGCTAGTCTGCAATGCATTCCATTGGGATCAGCAAATGAATGTGCCAAAGACATAGTAAAAAGTGCGTGCAGGGGAGATATGTATGTGACAAACCCTTCATGGCTCAAAGTGATGTTTCCTTTTCAGGTGCTTTATCCTGAGTTAGTGGACTGGGCAGAACGACACATCTTTGGGCTTTGGCAAAAGCCTTCTTGTAAGAAGGGCGATCTTCGTATGTCTAAGAATAACCACGTGCTTAAGACAGAATAA

Protein sequence

>Msa0620270

MSAICSILNVVLPPLSLISIPIIMLPFLFVKLLIYAKNLVHTESMERKGVLITGAASGIGEELAYEYAKRGARLSLVDIRKENLVAVADMATSLGSPDVTIIGADVSKVEDSKRFIDETIKHFGRLDHLVNNAGVSGIPILIEDIHDLTKYNPIMDTNFWGAVHGTLYAIPHLKNSKGRIIVVASGCGWFPLPRLSLYNASKAATISFFETLRIELGWTIGITIVTPGFIKTNMALKAYEDEASLQCIPLGSANECAKDIVKSACRGDMYVTNPSWLKVMFPFQVLYPELVDWAERHIFGLWQKPSCKKGDLRMSKNNHVLKTE*