Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0757110 | sp|Q94CL9|KRP7_ARATH | 71.739 | 46 | 13 | 0 | 137 | 182 | 150 | 195 | 2.03e-17 | 79.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0757110 | G7K7Z7 | 95.652 | 184 | 5 | 2 | 1 | 182 | 1 | 183 | 1.30e-120 | 347 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003470 | Msa0757110 | 0.816306 | 5.917939e-52 | -8.615850e-47 |
Msa0004350 | Msa0757110 | 0.806896 | 6.584501e-50 | -8.615850e-47 |
Msa0007230 | Msa0757110 | 0.807618 | 4.629954e-50 | -8.615850e-47 |
Msa0008850 | Msa0757110 | 0.819909 | 9.064084e-53 | -8.615850e-47 |
Msa0017120 | Msa0757110 | 0.829072 | 6.314326e-55 | -8.615850e-47 |
Msa0018220 | Msa0757110 | 0.818676 | 1.730630e-52 | -8.615850e-47 |
Msa0030000 | Msa0757110 | 0.817472 | 3.239918e-52 | -8.615850e-47 |
Msa0030740 | Msa0757110 | 0.805720 | 1.165117e-49 | -8.615850e-47 |
Msa0035090 | Msa0757110 | 0.817309 | 3.525453e-52 | -8.615850e-47 |
Msa0039200 | Msa0757110 | 0.824928 | 6.187883e-54 | -8.615850e-47 |
Msa0042220 | Msa0757110 | 0.812285 | 4.578149e-51 | -8.615850e-47 |
Msa0047470 | Msa0757110 | 0.803604 | 3.220861e-49 | -8.615850e-47 |
Msa0052020 | Msa0757110 | 0.800636 | 1.313365e-48 | -8.615850e-47 |
Msa0055280 | Msa0757110 | 0.815459 | 9.144946e-52 | -8.615850e-47 |
Msa0055590 | Msa0757110 | 0.808897 | 2.471615e-50 | -8.615850e-47 |
Msa0057260 | Msa0757110 | 0.818225 | 2.190613e-52 | -8.615850e-47 |
Msa0060600 | Msa0757110 | 0.814218 | 1.723458e-51 | -8.615850e-47 |
Msa0062750 | Msa0757110 | 0.826983 | 2.010846e-54 | -8.615850e-47 |
Msa0065390 | Msa0757110 | 0.809655 | 1.699929e-50 | -8.615850e-47 |
Msa0074230 | Msa0757110 | 0.823810 | 1.133400e-53 | -8.615850e-47 |
Msa0074760 | Msa0757110 | 0.808226 | 3.436831e-50 | -8.615850e-47 |
Msa0075850 | Msa0757110 | 0.835337 | 1.779615e-56 | -8.615850e-47 |
Msa0083160 | Msa0757110 | 0.837944 | 3.854313e-57 | -8.615850e-47 |
Msa0086820 | Msa0757110 | 0.819483 | 1.134501e-52 | -8.615850e-47 |
Msa0089210 | Msa0757110 | 0.806583 | 7.668021e-50 | -8.615850e-47 |
Msa0094060 | Msa0757110 | 0.802181 | 6.336707e-49 | -8.615850e-47 |
Msa0094420 | Msa0757110 | 0.832780 | 7.777645e-56 | -8.615850e-47 |
Msa0096230 | Msa0757110 | 0.808803 | 2.587703e-50 | -8.615850e-47 |
Msa0097050 | Msa0757110 | 0.817896 | 2.599418e-52 | -8.615850e-47 |
Msa0101060 | Msa0757110 | 0.801258 | 9.802128e-49 | -8.615850e-47 |
Msa0102800 | Msa0757110 | 0.809634 | 1.717285e-50 | -8.615850e-47 |
Msa0103060 | Msa0757110 | 0.810060 | 1.390703e-50 | -8.615850e-47 |
Msa0105340 | Msa0757110 | 0.800637 | 1.312793e-48 | -8.615850e-47 |
Msa0110710 | Msa0757110 | 0.809353 | 1.973108e-50 | -8.615850e-47 |
Msa0116260 | Msa0757110 | 0.804276 | 2.335162e-49 | -8.615850e-47 |
Msa0603680 | Msa0757110 | 0.816408 | 5.617466e-52 | -8.615850e-47 |
Msa0606060 | Msa0757110 | 0.831693 | 1.444706e-55 | -8.615850e-47 |
Msa0607280 | Msa0757110 | 0.827320 | 1.669670e-54 | -8.615850e-47 |
Msa0619060 | Msa0757110 | 0.827108 | 1.876866e-54 | -8.615850e-47 |
Msa0619330 | Msa0757110 | 0.811568 | 6.560830e-51 | -8.615850e-47 |
Msa0620640 | Msa0757110 | 0.808133 | 3.597664e-50 | -8.615850e-47 |
Msa0622390 | Msa0757110 | 0.858815 | 6.355963e-63 | -8.615850e-47 |
Msa0623270 | Msa0757110 | 0.801337 | 9.444713e-49 | -8.615850e-47 |
Msa0626230 | Msa0757110 | 0.825637 | 4.206104e-54 | -8.615850e-47 |
Msa0626890 | Msa0757110 | 0.835801 | 1.358006e-56 | -8.615850e-47 |
Msa0628060 | Msa0757110 | 0.805216 | 1.485557e-49 | -8.615850e-47 |
Msa0640880 | Msa0757110 | 0.818538 | 1.860102e-52 | -8.615850e-47 |
Msa0646390 | Msa0757110 | 0.840875 | 6.681490e-58 | -8.615850e-47 |
Msa0647000 | Msa0757110 | 0.806411 | 8.333108e-50 | -8.615850e-47 |
Msa0653710 | Msa0757110 | 0.804831 | 1.788132e-49 | -8.615850e-47 |
Msa0654060 | Msa0757110 | 0.812312 | 4.517703e-51 | -8.615850e-47 |
Msa0662860 | Msa0757110 | 0.804708 | 1.897018e-49 | -8.615850e-47 |
Msa0667220 | Msa0757110 | 0.804882 | 1.745142e-49 | -8.615850e-47 |
Msa0681890 | Msa0757110 | 0.804122 | 2.513644e-49 | -8.615850e-47 |
Msa0686610 | Msa0757110 | 0.836299 | 1.015321e-56 | -8.615850e-47 |
Msa0690720 | Msa0757110 | 0.811667 | 6.244114e-51 | -8.615850e-47 |
Msa0702070 | Msa0757110 | 0.800899 | 1.160592e-48 | -8.615850e-47 |
Msa0702120 | Msa0757110 | 0.800341 | 1.508193e-48 | -8.615850e-47 |
Msa0706410 | Msa0757110 | 0.807787 | 4.261288e-50 | -8.615850e-47 |
Msa0707780 | Msa0757110 | 0.821353 | 4.224510e-53 | -8.615850e-47 |
Msa0709480 | Msa0757110 | 0.817598 | 3.034666e-52 | -8.615850e-47 |
Msa0714020 | Msa0757110 | 0.831681 | 1.454312e-55 | -8.615850e-47 |
Msa0714160 | Msa0757110 | 0.827790 | 1.287792e-54 | -8.615850e-47 |
Msa0717510 | Msa0757110 | 0.804173 | 2.453487e-49 | -8.615850e-47 |
Msa0719340 | Msa0757110 | 0.812420 | 4.279093e-51 | -8.615850e-47 |
Msa0735470 | Msa0757110 | 0.806817 | 6.841151e-50 | -8.615850e-47 |
Msa0736930 | Msa0757110 | 0.836187 | 1.083765e-56 | -8.615850e-47 |
Msa0739610 | Msa0757110 | 0.826793 | 2.232029e-54 | -8.615850e-47 |
Msa0740420 | Msa0757110 | 0.800718 | 1.263494e-48 | -8.615850e-47 |
Msa0743640 | Msa0757110 | 0.801745 | 7.788011e-49 | -8.615850e-47 |
Msa0756480 | Msa0757110 | 0.819433 | 1.164545e-52 | -8.615850e-47 |
Msa0757110 | Msa0787720 | 0.815997 | 6.938964e-52 | -8.615850e-47 |
Msa0757110 | Msa0790830 | 0.817572 | 3.075608e-52 | -8.615850e-47 |
Msa0757110 | Msa0792510 | 0.833552 | 4.995663e-56 | -8.615850e-47 |
Msa0757110 | Msa0803130 | 0.804529 | 2.067598e-49 | -8.615850e-47 |
Msa0757110 | Msa0804930 | 0.800152 | 1.648068e-48 | -8.615850e-47 |
Msa0757110 | Msa0820670 | 0.806033 | 1.001095e-49 | -8.615850e-47 |
Msa0757110 | Msa0824770 | 0.804906 | 1.725079e-49 | -8.615850e-47 |
Msa0757110 | Msa0835510 | 0.802318 | 5.939841e-49 | -8.615850e-47 |
Msa0757110 | Msa0836190 | 0.932476 | 8.046518e-95 | -8.615850e-47 |
Msa0757110 | Msa0841490 | 0.802774 | 4.782937e-49 | -8.615850e-47 |
Msa0757110 | Msa0855490 | 0.815529 | 8.824008e-52 | -8.615850e-47 |
Msa0757110 | Msa0907700 | 0.824802 | 6.627065e-54 | -8.615850e-47 |
Msa0757110 | Msa0925160 | 0.814323 | 1.633441e-51 | -8.615850e-47 |
Msa0757110 | Msa0930330 | 0.803857 | 2.852926e-49 | -8.615850e-47 |
Msa0757110 | Msa0934830 | 0.802521 | 5.394558e-49 | -8.615850e-47 |
Msa0757110 | Msa0946650 | 0.805122 | 1.554484e-49 | -8.615850e-47 |
Msa0757110 | Msa0955300 | 0.812091 | 5.046810e-51 | -8.615850e-47 |
Msa0757110 | Msa0955310 | 0.822252 | 2.616683e-53 | -8.615850e-47 |
Msa0757110 | Msa0971860 | 0.800133 | 1.662960e-48 | -8.615850e-47 |
Msa0757110 | Msa0978000 | 0.820650 | 6.131780e-53 | -8.615850e-47 |
Msa0757110 | Msa0981300 | 0.802284 | 6.033993e-49 | -8.615850e-47 |
Msa0757110 | Msa1020710 | 0.804490 | 2.106943e-49 | -8.615850e-47 |
Msa0757110 | Msa1030280 | 0.821921 | 3.121859e-53 | -8.615850e-47 |
Msa0757110 | Msa1031220 | 0.814619 | 1.404781e-51 | -8.615850e-47 |
Msa0757110 | Msa1033160 | 0.810517 | 1.108130e-50 | -8.615850e-47 |
Msa0757110 | Msa1042380 | 0.814426 | 1.550399e-51 | -8.615850e-47 |
Msa0757110 | Msa1044040 | 0.808377 | 3.190935e-50 | -8.615850e-47 |
Msa0757110 | Msa1058010 | 0.806611 | 7.561204e-50 | -8.615850e-47 |
Msa0757110 | Msa1069300 | 0.807649 | 4.560218e-50 | -8.615850e-47 |
Msa0757110 | Msa1070900 | 0.819037 | 1.432965e-52 | -8.615850e-47 |
Msa0757110 | Msa1084490 | 0.802280 | 6.046614e-49 | -8.615850e-47 |
Msa0757110 | Msa1097380 | 0.813146 | 2.966375e-51 | -8.615850e-47 |
Msa0757110 | Msa1099030 | 0.806970 | 6.350006e-50 | -8.615850e-47 |
Msa0757110 | Msa1102540 | 0.807402 | 5.143581e-50 | -8.615850e-47 |
Msa0757110 | Msa1120540 | 0.812127 | 4.957240e-51 | -8.615850e-47 |
Msa0757110 | Msa1125100 | 0.829030 | 6.466782e-55 | -8.615850e-47 |
Msa0757110 | Msa1125150 | 0.830503 | 2.830460e-55 | -8.615850e-47 |
Msa0757110 | Msa1125780 | 0.809203 | 2.125426e-50 | -8.615850e-47 |
Msa0757110 | Msa1125950 | 0.806727 | 7.147528e-50 | -8.615850e-47 |
Msa0757110 | Msa1129720 | 0.800813 | 1.208528e-48 | -8.615850e-47 |
Msa0757110 | Msa1140010 | 0.803147 | 4.005414e-49 | -8.615850e-47 |
Msa0757110 | Msa1149760 | 0.837095 | 6.362396e-57 | -8.615850e-47 |
Msa0757110 | Msa1159360 | 0.800370 | 1.487821e-48 | -8.615850e-47 |
Msa0757110 | Msa1160730 | -0.822167 | 2.738248e-53 | -8.615850e-47 |
Msa0757110 | Msa1166180 | 0.834913 | 2.277092e-56 | -8.615850e-47 |
Msa0757110 | Msa1166280 | 0.831497 | 1.614451e-55 | -8.615850e-47 |
Msa0757110 | Msa1168840 | 0.801708 | 7.927512e-49 | -8.615850e-47 |
Msa0757110 | Msa1171340 | 0.811532 | 6.679441e-51 | -8.615850e-47 |
Msa0757110 | Msa1183730 | 0.806631 | 7.490348e-50 | -8.615850e-47 |
Msa0757110 | Msa1195860 | 0.839771 | 1.298404e-57 | -8.615850e-47 |
Msa0757110 | Msa1200920 | 0.840599 | 7.891630e-58 | -8.615850e-47 |
Msa0757110 | Msa1201990 | 0.820254 | 7.557316e-53 | -8.615850e-47 |
Msa0757110 | Msa1214400 | 0.826382 | 2.796849e-54 | -8.615850e-47 |
Msa0757110 | Msa1218720 | 0.813675 | 2.270260e-51 | -8.615850e-47 |
Msa0757110 | Msa1220450 | -0.818692 | 1.716672e-52 | -8.615850e-47 |
Msa0757110 | Msa1220460 | -0.815960 | 7.071565e-52 | -8.615850e-47 |
Msa0757110 | Msa1220480 | -0.814459 | 1.524272e-51 | -8.615850e-47 |
Msa0757110 | Msa1221200 | -0.802531 | 5.367213e-49 | -8.615850e-47 |
Msa0757110 | Msa1221260 | 0.861769 | 8.130971e-64 | -8.615850e-47 |
Msa0757110 | Msa1226600 | 0.819551 | 1.094727e-52 | -8.615850e-47 |
Msa0757110 | Msa1229660 | 0.800540 | 1.373983e-48 | -8.615850e-47 |
Msa0757110 | Msa1232860 | 0.838362 | 3.007596e-57 | -8.615850e-47 |
Msa0757110 | Msa1238480 | 0.807621 | 4.621168e-50 | -8.615850e-47 |
Msa0757110 | Msa1248400 | 0.823128 | 1.636403e-53 | -8.615850e-47 |
Msa0757110 | Msa1254770 | 0.841952 | 3.477078e-58 | -8.615850e-47 |
Msa0757110 | Msa1254800 | 0.845465 | 3.992928e-59 | -8.615850e-47 |
Msa0757110 | Msa1261000 | 0.816017 | 6.869263e-52 | -8.615850e-47 |
Msa0757110 | Msa1265310 | 0.851224 | 1.020020e-60 | -8.615850e-47 |
Msa0757110 | Msa1275290 | 0.817931 | 2.553325e-52 | -8.615850e-47 |
Msa0757110 | Msa1289340 | 0.815623 | 8.409546e-52 | -8.615850e-47 |
Msa0757110 | Msa1295010 | 0.855622 | 5.575978e-62 | -8.615850e-47 |
Msa0757110 | Msa1300500 | 0.820067 | 8.343964e-53 | -8.615850e-47 |
Msa0757110 | Msa1302150 | 0.811773 | 5.921221e-51 | -8.615850e-47 |
Msa0757110 | Msa1309910 | 0.810971 | 8.838690e-51 | -8.615850e-47 |
Msa0757110 | Msa1310340 | 0.810522 | 1.105693e-50 | -8.615850e-47 |
Msa0757110 | Msa1313460 | 0.826278 | 2.961147e-54 | -8.615850e-47 |
Msa0757110 | Msa1316170 | 0.817122 | 3.884844e-52 | -8.615850e-47 |
Msa0757110 | Msa1323060 | 0.826178 | 3.128727e-54 | -8.615850e-47 |
Msa0757110 | Msa1325980 | 0.821937 | 3.094980e-53 | -8.615850e-47 |
Msa0757110 | Msa1327820 | 0.850010 | 2.238233e-60 | -8.615850e-47 |
Msa0757110 | Msa1337340 | 0.837314 | 5.591286e-57 | -8.615850e-47 |
Msa0757110 | Msa1343340 | 0.815714 | 8.024921e-52 | -8.615850e-47 |
Msa0757110 | Msa1349360 | 0.814624 | 1.401625e-51 | -8.615850e-47 |
Msa0757110 | Msa1352290 | 0.818398 | 2.001515e-52 | -8.615850e-47 |
Msa0757110 | Msa1352820 | 0.861255 | 1.166194e-63 | -8.615850e-47 |
Msa0757110 | Msa1354040 | 0.826895 | 2.110935e-54 | -8.615850e-47 |
Msa0757110 | Msa1357170 | 0.810605 | 1.060568e-50 | -8.615850e-47 |
Msa0757110 | Msa1358870 | -0.806822 | 6.824400e-50 | -8.615850e-47 |
Msa0757110 | Msa1366620 | 0.818668 | 1.738403e-52 | -8.615850e-47 |
Msa0757110 | Msa1367600 | 0.805714 | 1.168293e-49 | -8.615850e-47 |
Msa0757110 | Msa1367940 | 0.836754 | 7.773872e-57 | -8.615850e-47 |
Msa0757110 | Msa1373950 | 0.832233 | 1.062578e-55 | -8.615850e-47 |
Msa0757110 | Msa1375630 | 0.805944 | 1.045011e-49 | -8.615850e-47 |
Msa0757110 | Msa1376530 | 0.803765 | 2.982052e-49 | -8.615850e-47 |
Msa0757110 | Msa1379070 | 0.847540 | 1.084407e-59 | -8.615850e-47 |
Msa0757110 | Msa1379090 | 0.845447 | 4.039541e-59 | -8.615850e-47 |
Msa0757110 | Msa1385940 | 0.817812 | 2.716148e-52 | -8.615850e-47 |
Msa0757110 | Msa1388230 | 0.833253 | 5.931724e-56 | -8.615850e-47 |
Msa0757110 | Msa1392680 | 0.816781 | 4.632109e-52 | -8.615850e-47 |
Msa0757110 | Msa1397540 | 0.854915 | 8.957097e-62 | -8.615850e-47 |
Msa0757110 | Msa1410170 | 0.815210 | 1.039128e-51 | -8.615850e-47 |
Msa0757110 | Msa1429830 | 0.805654 | 1.202637e-49 | -8.615850e-47 |
Msa0757110 | Msa1435470 | 0.833320 | 5.706928e-56 | -8.615850e-47 |
Msa0757110 | Msa1435910 | 0.820505 | 6.620547e-53 | -8.615850e-47 |
Msa0757110 | Msa1439670 | 0.800244 | 1.578518e-48 | -8.615850e-47 |
Msa0757110 | Msa1456810 | 0.800759 | 1.239464e-48 | -8.615850e-47 |
Msa0757110 | Msa1458920 | 0.813030 | 3.145708e-51 | -8.615850e-47 |
Msa0122180 | Msa0757110 | 0.818033 | 2.420571e-52 | -8.615850e-47 |
Msa0130120 | Msa0757110 | 0.809562 | 1.780053e-50 | -8.615850e-47 |
Msa0133670 | Msa0757110 | 0.828756 | 7.532909e-55 | -8.615850e-47 |
Msa0133880 | Msa0757110 | 0.831562 | 1.556330e-55 | -8.615850e-47 |
Msa0141670 | Msa0757110 | 0.810591 | 1.068277e-50 | -8.615850e-47 |
Msa0143360 | Msa0757110 | 0.813686 | 2.257840e-51 | -8.615850e-47 |
Msa0146470 | Msa0757110 | 0.817995 | 2.468530e-52 | -8.615850e-47 |
Msa0146600 | Msa0757110 | 0.832239 | 1.059039e-55 | -8.615850e-47 |
Msa0151690 | Msa0757110 | 0.835069 | 2.079802e-56 | -8.615850e-47 |
Msa0153640 | Msa0757110 | 0.803555 | 3.297406e-49 | -8.615850e-47 |
Msa0157020 | Msa0757110 | 0.822306 | 2.541768e-53 | -8.615850e-47 |
Msa0162030 | Msa0757110 | 0.836764 | 7.730627e-57 | -8.615850e-47 |
Msa0162050 | Msa0757110 | 0.815559 | 8.687683e-52 | -8.615850e-47 |
Msa0162070 | Msa0757110 | 0.819675 | 1.025326e-52 | -8.615850e-47 |
Msa0168390 | Msa0757110 | 0.826683 | 2.371061e-54 | -8.615850e-47 |
Msa0175900 | Msa0757110 | 0.833557 | 4.979526e-56 | -8.615850e-47 |
Msa0180980 | Msa0757110 | 0.831637 | 1.491139e-55 | -8.615850e-47 |
Msa0181290 | Msa0757110 | 0.800490 | 1.406700e-48 | -8.615850e-47 |
Msa0184120 | Msa0757110 | 0.825418 | 4.737705e-54 | -8.615850e-47 |
Msa0194570 | Msa0757110 | 0.814454 | 1.528188e-51 | -8.615850e-47 |
Msa0207180 | Msa0757110 | 0.846915 | 1.608982e-59 | -8.615850e-47 |
Msa0208930 | Msa0757110 | 0.800135 | 1.661291e-48 | -8.615850e-47 |
Msa0213650 | Msa0757110 | 0.827114 | 1.870928e-54 | -8.615850e-47 |
Msa0217470 | Msa0757110 | 0.805557 | 1.260628e-49 | -8.615850e-47 |
Msa0226800 | Msa0757110 | 0.804449 | 2.149013e-49 | -8.615850e-47 |
Msa0227490 | Msa0757110 | 0.834170 | 3.498442e-56 | -8.615850e-47 |
Msa0227500 | Msa0757110 | 0.844990 | 5.368282e-59 | -8.615850e-47 |
Msa0227960 | Msa0757110 | 0.813458 | 2.533899e-51 | -8.615850e-47 |
Msa0230400 | Msa0757110 | 0.855554 | 5.838058e-62 | -8.615850e-47 |
Msa0365150 | Msa0757110 | 0.811500 | 6.787638e-51 | -8.615850e-47 |
Msa0365870 | Msa0757110 | 0.818823 | 1.602906e-52 | -8.615850e-47 |
Msa0371610 | Msa0757110 | 0.856046 | 4.190750e-62 | -8.615850e-47 |
Msa0375430 | Msa0757110 | 0.801886 | 7.287545e-49 | -8.615850e-47 |
Msa0376900 | Msa0757110 | 0.801938 | 7.109475e-49 | -8.615850e-47 |
Msa0380420 | Msa0757110 | 0.809371 | 1.956103e-50 | -8.615850e-47 |
Msa0387790 | Msa0757110 | 0.804791 | 1.823406e-49 | -8.615850e-47 |
Msa0390950 | Msa0757110 | 0.805126 | 1.551375e-49 | -8.615850e-47 |
Msa0392410 | Msa0757110 | 0.813069 | 3.084134e-51 | -8.615850e-47 |
Msa0392450 | Msa0757110 | 0.817571 | 3.078272e-52 | -8.615850e-47 |
Msa0392480 | Msa0757110 | 0.801370 | 9.298018e-49 | -8.615850e-47 |
Msa0413180 | Msa0757110 | 0.804296 | 2.312194e-49 | -8.615850e-47 |
Msa0413740 | Msa0757110 | 0.807711 | 4.424051e-50 | -8.615850e-47 |
Msa0417630 | Msa0757110 | 0.804105 | 2.533989e-49 | -8.615850e-47 |
Msa0420070 | Msa0757110 | 0.850571 | 1.558463e-60 | -8.615850e-47 |
Msa0423110 | Msa0757110 | 0.843571 | 1.291373e-58 | -8.615850e-47 |
Msa0427050 | Msa0757110 | 0.846158 | 2.589758e-59 | -8.615850e-47 |
Msa0458790 | Msa0757110 | 0.806889 | 6.606945e-50 | -8.615850e-47 |
Msa0466100 | Msa0757110 | 0.861636 | 8.926810e-64 | -8.615850e-47 |
Msa0469270 | Msa0757110 | 0.818557 | 1.841875e-52 | -8.615850e-47 |
Msa0473450 | Msa0757110 | 0.837298 | 5.645331e-57 | -8.615850e-47 |
Msa0477780 | Msa0757110 | 0.833320 | 5.706585e-56 | -8.615850e-47 |
Msa0244750 | Msa0757110 | 0.808490 | 3.019669e-50 | -8.615850e-47 |
Msa0253370 | Msa0757110 | 0.807397 | 5.156538e-50 | -8.615850e-47 |
Msa0253410 | Msa0757110 | 0.808136 | 3.591063e-50 | -8.615850e-47 |
Msa0260960 | Msa0757110 | 0.805939 | 1.047566e-49 | -8.615850e-47 |
Msa0265780 | Msa0757110 | 0.804539 | 2.057771e-49 | -8.615850e-47 |
Msa0270610 | Msa0757110 | 0.810137 | 1.338444e-50 | -8.615850e-47 |
Msa0273710 | Msa0757110 | 0.809045 | 2.297384e-50 | -8.615850e-47 |
Msa0274780 | Msa0757110 | 0.864744 | 9.757293e-65 | -8.615850e-47 |
Msa0281570 | Msa0757110 | 0.811817 | 5.791257e-51 | -8.615850e-47 |
Msa0284870 | Msa0757110 | 0.808913 | 2.451247e-50 | -8.615850e-47 |
Msa0290950 | Msa0757110 | 0.822681 | 2.080106e-53 | -8.615850e-47 |
Msa0290970 | Msa0757110 | 0.821651 | 3.605262e-53 | -8.615850e-47 |
Msa0293080 | Msa0757110 | 0.822744 | 2.010718e-53 | -8.615850e-47 |
Msa0301800 | Msa0757110 | 0.806810 | 6.864250e-50 | -8.615850e-47 |
Msa0303780 | Msa0757110 | 0.805339 | 1.400217e-49 | -8.615850e-47 |
Msa0304870 | Msa0757110 | 0.838006 | 3.714631e-57 | -8.615850e-47 |
Msa0314790 | Msa0757110 | 0.818408 | 1.990667e-52 | -8.615850e-47 |
Msa0315480 | Msa0757110 | 0.861566 | 9.379245e-64 | -8.615850e-47 |
Msa0320540 | Msa0757110 | 0.822096 | 2.844005e-53 | -8.615850e-47 |
Msa0330400 | Msa0757110 | 0.803341 | 3.651483e-49 | -8.615850e-47 |
Msa0331780 | Msa0757110 | 0.819350 | 1.216321e-52 | -8.615850e-47 |
Msa0341260 | Msa0757110 | 0.837516 | 4.964517e-57 | -8.615850e-47 |
Msa0344070 | Msa0757110 | 0.828351 | 9.435578e-55 | -8.615850e-47 |
Msa0344580 | Msa0757110 | 0.809982 | 1.445244e-50 | -8.615850e-47 |
Msa0487560 | Msa0757110 | 0.825233 | 5.242408e-54 | -8.615850e-47 |
Msa0487620 | Msa0757110 | 0.827727 | 1.333730e-54 | -8.615850e-47 |
Msa0500510 | Msa0757110 | 0.806943 | 6.436248e-50 | -8.615850e-47 |
Msa0505390 | Msa0757110 | 0.805071 | 1.593166e-49 | -8.615850e-47 |
Msa0511890 | Msa0757110 | 0.860054 | 2.699264e-63 | -8.615850e-47 |
Msa0512310 | Msa0757110 | 0.801767 | 7.709250e-49 | -8.615850e-47 |
Msa0538240 | Msa0757110 | 0.813911 | 2.013627e-51 | -8.615850e-47 |
Msa0548720 | Msa0757110 | 0.805348 | 1.394000e-49 | -8.615850e-47 |
Msa0549740 | Msa0757110 | 0.829438 | 5.146699e-55 | -8.615850e-47 |
Msa0558890 | Msa0757110 | 0.801511 | 8.700791e-49 | -8.615850e-47 |
Msa0575250 | Msa0757110 | 0.813068 | 3.086779e-51 | -8.615850e-47 |
Msa0576420 | Msa0757110 | 0.811029 | 8.588193e-51 | -8.615850e-47 |
Msa0581340 | Msa0757110 | 0.860052 | 2.701643e-63 | -8.615850e-47 |
Msa0582110 | Msa0757110 | 0.806879 | 6.638717e-50 | -8.615850e-47 |
Msa0587060 | Msa0757110 | 0.807125 | 5.888303e-50 | -8.615850e-47 |
Msa0594180 | Msa0757110 | 0.831930 | 1.262608e-55 | -8.615850e-47 |
Msa0595780 | Msa0757110 | 0.823568 | 1.291597e-53 | -8.615850e-47 |
Msa0596100 | Msa0757110 | 0.806970 | 6.351954e-50 | -8.615850e-47 |
Msa0600390 | Msa0757110 | 0.810350 | 1.204032e-50 | -8.615850e-47 |
Msa0601710 | Msa0757110 | 0.808961 | 2.393876e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0757110 | MtrunA17_Chr5g0402391 | 95.652 | 184 | 5 | 2 | 1 | 182 | 1 | 183 | 2.50e-124 | 347 |
Msa0757110 | MtrunA17_Chr8g0374981 | 38.983 | 177 | 97 | 4 | 8 | 181 | 6 | 174 | 1.12e-25 | 97.1 |
Msa0757110 | MtrunA17_Chr7g0237211 | 31.795 | 195 | 101 | 7 | 5 | 180 | 25 | 206 | 1.17e-18 | 79.7 |
Msa0757110 | MtrunA17_Chr7g0237171 | 32.143 | 196 | 96 | 7 | 5 | 178 | 65 | 245 | 2.62e-15 | 71.6 |
Msa0757110 | MtrunA17_Chr4g0045111 | 61.905 | 42 | 16 | 0 | 139 | 180 | 111 | 152 | 2.24e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0757110 | AT1G49620.1 | 71.739 | 46 | 13 | 0 | 137 | 182 | 150 | 195 | 2.06e-18 | 79.0 |
Msa0757110 | AT1G49620.3 | 71.739 | 46 | 13 | 0 | 137 | 182 | 155 | 200 | 2.18e-18 | 79.3 |
Msa0757110 | AT5G48820.1 | 30.233 | 215 | 108 | 8 | 1 | 182 | 17 | 222 | 1.34e-16 | 74.7 |
Msa0757110 | AT5G48820.2 | 63.830 | 47 | 17 | 0 | 136 | 182 | 194 | 240 | 2.59e-16 | 74.3 |
Msa0757110 | AT3G24810.1 | 36.364 | 88 | 42 | 2 | 95 | 182 | 116 | 189 | 2.00e-12 | 63.2 |
Find 71 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTGTATAGATTTAATATT+TGG | 0.143028 | 5_2:-11832570 | Msa0757110:three_prime_UTR |
GGGATGTGGTGGGTTATTTA+TGG | 0.174091 | 5_2:-11832549 | Msa0757110:three_prime_UTR |
AATGTTATTGTTAACGTTCA+TGG | 0.256129 | 5_2:+11832730 | None:intergenic |
CTGCAGACTGCGTTTGCGTT+TGG | 0.306961 | 5_2:+11834336 | None:intergenic |
TCGTTGGTTCGTTCTTTGAA+TGG | 0.337118 | 5_2:-11832504 | Msa0757110:three_prime_UTR |
GAGATTTCTTCTCAGGTTGT+AGG | 0.348310 | 5_2:-11833875 | Msa0757110:CDS |
CTTCTCAGGTTGTAGGTGTC+AGG | 0.365163 | 5_2:-11833868 | Msa0757110:CDS |
ATCAATGGAGATTTCTTCTC+AGG | 0.379055 | 5_2:-11833882 | Msa0757110:exon |
CGTTGGTTCGTTCTTTGAAT+GGG | 0.382563 | 5_2:-11832503 | Msa0757110:three_prime_UTR |
AGTGTATAGATTTAATATTT+GGG | 0.387507 | 5_2:-11832569 | Msa0757110:three_prime_UTR |
GACACGTCGTTGTAACTAAC+GGG | 0.389369 | 5_2:+11834239 | None:intergenic |
GGATCCATTGCTTGAACAAC+AGG | 0.405756 | 5_2:+11833673 | None:intergenic |
TTCAAACGAGTTTGAGTCAA+TGG | 0.407914 | 5_2:-11833011 | Msa0757110:CDS |
TCGCTGAATTTCATCATCAA+TGG | 0.423818 | 5_2:-11833897 | Msa0757110:exon |
GGAAAATTATGAAGGGATCA+TGG | 0.430084 | 5_2:+11834428 | None:intergenic |
TTGCAAGTGGAAAATTATGA+AGG | 0.432757 | 5_2:+11834420 | None:intergenic |
GCCGACGATTCTTCCTCAAC+TGG | 0.440359 | 5_2:-11833747 | Msa0757110:CDS |
AGAAATTGAACGGTTAGGAT+TGG | 0.454247 | 5_2:+11834107 | None:intergenic |
TCCCTTGTTTAATCAGATAA+CGG | 0.456647 | 5_2:-11834214 | Msa0757110:five_prime_UTR |
GAAAATTATGAAGGGATCAT+GGG | 0.462110 | 5_2:+11834429 | None:intergenic |
ATAGGAATGGGAAGAGGATG+AGG | 0.467161 | 5_2:+11834294 | None:intergenic |
GATTCTTCCTCAACTGGAAA+AGG | 0.467164 | 5_2:-11833741 | Msa0757110:CDS |
TGATAAGAAATTGAACGGTT+AGG | 0.471693 | 5_2:+11834102 | None:intergenic |
AAAGATTAAGGTAGTTTCGT+TGG | 0.472995 | 5_2:-11832520 | Msa0757110:three_prime_UTR |
ATTTAATATTTGGGATGTGG+TGG | 0.487137 | 5_2:-11832560 | Msa0757110:three_prime_UTR |
CAGTCTCCGTTAATAGTGAC+GGG | 0.487784 | 5_2:+11834162 | None:intergenic |
CGCTCAAGCTGCATTAGCCA+TGG | 0.498701 | 5_2:-11833840 | Msa0757110:CDS |
GTTGGAATAGGAATGGGAAG+AGG | 0.501706 | 5_2:+11834288 | None:intergenic |
CGCCGTTATCTGATTAAACA+AGG | 0.505496 | 5_2:+11834212 | None:intergenic |
GATGAAATTCAGCGAAGTAC+GGG | 0.509147 | 5_2:+11833905 | None:intergenic |
TCTCAAAACGGGGAATTTGA+CGG | 0.510894 | 5_2:+11834189 | None:intergenic |
TTGATAACGCGCGTGGAGTA+CGG | 0.517751 | 5_2:+11834060 | None:intergenic |
CACTCGTAGCGTCCTTCCAA+TGG | 0.522068 | 5_2:+11832766 | None:intergenic |
CCAGTCTCCGTTAATAGTGA+CGG | 0.523295 | 5_2:+11834161 | None:intergenic |
TAGATTTAATATTTGGGATG+TGG | 0.523492 | 5_2:-11832563 | Msa0757110:three_prime_UTR |
TGATGAAATTCAGCGAAGTA+CGG | 0.524846 | 5_2:+11833904 | None:intergenic |
CCGTTCAACTCGATGAAGAA+AGG | 0.525470 | 5_2:-11833652 | Msa0757110:CDS |
TTTAATATTTGGGATGTGGT+GGG | 0.527047 | 5_2:-11832559 | Msa0757110:three_prime_UTR |
CCTTTCTTCATCGAGTTGAA+CGG | 0.528328 | 5_2:+11833652 | None:intergenic |
CCGTCACTATTAACGGAGAC+TGG | 0.530529 | 5_2:-11834161 | Msa0757110:five_prime_UTR |
GTGAAGGATGTTCCATTGGA+AGG | 0.536178 | 5_2:-11832778 | Msa0757110:CDS |
TCCAGTTGAGGAAGAATCGT+CGG | 0.551036 | 5_2:+11833746 | None:intergenic |
TCTTCAAGCTCAAATTCCGT+TGG | 0.553314 | 5_2:+11832947 | None:intergenic |
GCGTCCTGTTGTTCAAGCAA+TGG | 0.555643 | 5_2:-11833677 | Msa0757110:CDS |
TGCAAGTGGAAAATTATGAA+GGG | 0.556850 | 5_2:+11834421 | None:intergenic |
TTACTATTCACACCTCACTC+TGG | 0.568694 | 5_2:+11833949 | None:intergenic |
TATTGTGAAGGATGTTCCAT+TGG | 0.578054 | 5_2:-11832782 | Msa0757110:CDS |
TCTTCCTCAACTGGAAAAGG+AGG | 0.580715 | 5_2:-11833738 | Msa0757110:CDS |
TTGGAATTTACATACAACAA+AGG | 0.586695 | 5_2:+11834385 | None:intergenic |
GATCAAATCGTTAGATCTAG+AGG | 0.589450 | 5_2:-11833630 | Msa0757110:intron |
TGACACGTCGTTGTAACTAA+CGG | 0.593876 | 5_2:+11834238 | None:intergenic |
GAAACGCGATTATTTGCAAG+TGG | 0.593999 | 5_2:+11834407 | None:intergenic |
CATTGGAAGGACGCTACGAG+TGG | 0.598974 | 5_2:-11832765 | Msa0757110:CDS |
TTCTTCATCGGAGATATCAC+CGG | 0.604193 | 5_2:+11833706 | None:intergenic |
TGAAGTTGTAGCTTCATCCA+TGG | 0.608270 | 5_2:+11833823 | None:intergenic |
ATTGCTTGAACAACAGGACG+CGG | 0.618562 | 5_2:+11833679 | None:intergenic |
ACAGTGAAGAAGAATTTCAG+AGG | 0.627175 | 5_2:-11833393 | Msa0757110:intron |
GGACGCGGGAAATTCTTCAT+CGG | 0.641501 | 5_2:+11833694 | None:intergenic |
GAGAGTGTTGATAACGCGCG+TGG | 0.646351 | 5_2:+11834053 | None:intergenic |
TGTGATGATAAGAAATTGAA+CGG | 0.647986 | 5_2:+11834097 | None:intergenic |
TTGCTTGAACAACAGGACGC+GGG | 0.649814 | 5_2:+11833680 | None:intergenic |
TTCATCGGAGATATCACCGG+AGG | 0.654993 | 5_2:+11833709 | None:intergenic |
ATTGGAAGGACGCTACGAGT+GGG | 0.655621 | 5_2:-11832764 | Msa0757110:CDS |
ACACCTGAAAAGCCAGAGTG+AGG | 0.658166 | 5_2:-11833961 | Msa0757110:five_prime_UTR |
GTATAATTATGATATTGTGA+AGG | 0.659384 | 5_2:-11832794 | Msa0757110:CDS |
AAAATTATGAAGGGATCATG+GGG | 0.661542 | 5_2:+11834430 | None:intergenic |
GTCTCCGTTAATAGTGACGG+GGG | 0.678897 | 5_2:+11834164 | None:intergenic |
ACACGTCGTTGTAACTAACG+GGG | 0.680569 | 5_2:+11834240 | None:intergenic |
GCCGTTATCTGATTAAACAA+GGG | 0.689324 | 5_2:+11834213 | None:intergenic |
AGTCTCCGTTAATAGTGACG+GGG | 0.697219 | 5_2:+11834163 | None:intergenic |
CACGTCGTTGTAACTAACGG+GGG | 0.714208 | 5_2:+11834241 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTCTTACTATTTTAGTTT+AGG | - | chr5_2:11834249-11834268 | Msa0757110:five_prime_UTR | 15.0% |
!! | TAGTGTATAGATTTAATATT+TGG | - | chr5_2:11834333-11834352 | Msa0757110:five_prime_UTR | 15.0% |
!! | AGTGTATAGATTTAATATTT+GGG | - | chr5_2:11834334-11834353 | Msa0757110:five_prime_UTR | 15.0% |
!!! | TTTTCTTACTATTTTAGTTT+AGG | - | chr5_2:11834249-11834268 | Msa0757110:five_prime_UTR | 15.0% |
!! | TAGTGTATAGATTTAATATT+TGG | - | chr5_2:11834333-11834352 | Msa0757110:five_prime_UTR | 15.0% |
!! | AGTGTATAGATTTAATATTT+GGG | - | chr5_2:11834334-11834353 | Msa0757110:five_prime_UTR | 15.0% |
!!! | TTTGAAATTTGAATTTGCTT+TGG | - | chr5_2:11833535-11833554 | Msa0757110:intron | 20.0% |
!!! | TTAGTTATAGTTTTTGAGTT+AGG | - | chr5_2:11833568-11833587 | Msa0757110:intron | 20.0% |
!!! | ATATTTTTTGGAGAAGAAAT+CGG | + | chr5_2:11833935-11833954 | None:intergenic | 20.0% |
!! | GTATAATTATGATATTGTGA+AGG | - | chr5_2:11834109-11834128 | Msa0757110:five_prime_UTR | 20.0% |
!! | TTATGGAAGAAAAAAGATTA+AGG | - | chr5_2:11834371-11834390 | Msa0757110:five_prime_UTR | 20.0% |
!!! | TTTGAAATTTGAATTTGCTT+TGG | - | chr5_2:11833535-11833554 | Msa0757110:intron | 20.0% |
!!! | TTAGTTATAGTTTTTGAGTT+AGG | - | chr5_2:11833568-11833587 | Msa0757110:intron | 20.0% |
!!! | ATATTTTTTGGAGAAGAAAT+CGG | + | chr5_2:11833935-11833954 | None:intergenic | 20.0% |
!! | GTATAATTATGATATTGTGA+AGG | - | chr5_2:11834109-11834128 | Msa0757110:five_prime_UTR | 20.0% |
!! | TTATGGAAGAAAAAAGATTA+AGG | - | chr5_2:11834371-11834390 | Msa0757110:five_prime_UTR | 20.0% |
! | TTGGAATTTACATACAACAA+AGG | + | chr5_2:11832521-11832540 | None:intergenic | 25.0% |
! | TGTGATGATAAGAAATTGAA+CGG | + | chr5_2:11832809-11832828 | None:intergenic | 25.0% |
!!! | TTTCTTCTCTTTGAAGTTTT+TGG | + | chr5_2:11833109-11833128 | None:intergenic | 25.0% |
! | CTGAAATGAACAATTTAATG+CGG | - | chr5_2:11833325-11833344 | Msa0757110:intron | 25.0% |
! | CATTAAACGTTTCTATTTAC+AGG | - | chr5_2:11833451-11833470 | Msa0757110:intron | 25.0% |
! | AATGTTATTGTTAACGTTCA+TGG | + | chr5_2:11834176-11834195 | None:intergenic | 25.0% |
!! | TAGATTTAATATTTGGGATG+TGG | - | chr5_2:11834340-11834359 | Msa0757110:five_prime_UTR | 25.0% |
! | TTGGAATTTACATACAACAA+AGG | + | chr5_2:11832521-11832540 | None:intergenic | 25.0% |
! | TGTGATGATAAGAAATTGAA+CGG | + | chr5_2:11832809-11832828 | None:intergenic | 25.0% |
!!! | TTTCTTCTCTTTGAAGTTTT+TGG | + | chr5_2:11833109-11833128 | None:intergenic | 25.0% |
! | CTGAAATGAACAATTTAATG+CGG | - | chr5_2:11833325-11833344 | Msa0757110:intron | 25.0% |
! | CATTAAACGTTTCTATTTAC+AGG | - | chr5_2:11833451-11833470 | Msa0757110:intron | 25.0% |
! | AATGTTATTGTTAACGTTCA+TGG | + | chr5_2:11834176-11834195 | None:intergenic | 25.0% |
!! | TAGATTTAATATTTGGGATG+TGG | - | chr5_2:11834340-11834359 | Msa0757110:five_prime_UTR | 25.0% |
AAAATTATGAAGGGATCATG+GGG | + | chr5_2:11832476-11832495 | None:intergenic | 30.0% | |
GAAAATTATGAAGGGATCAT+GGG | + | chr5_2:11832477-11832496 | None:intergenic | 30.0% | |
TGCAAGTGGAAAATTATGAA+GGG | + | chr5_2:11832485-11832504 | None:intergenic | 30.0% | |
TTGCAAGTGGAAAATTATGA+AGG | + | chr5_2:11832486-11832505 | None:intergenic | 30.0% | |
!! | TGTTTTGTTGGAATAGGAAT+GGG | + | chr5_2:11832624-11832643 | None:intergenic | 30.0% |
! | TCCCTTGTTTAATCAGATAA+CGG | - | chr5_2:11832689-11832708 | Msa0757110:three_prime_UTR | 30.0% |
TGATAAGAAATTGAACGGTT+AGG | + | chr5_2:11832804-11832823 | None:intergenic | 30.0% | |
ATAGAAACGTTTAATGCGTT+AGG | + | chr5_2:11833447-11833466 | None:intergenic | 30.0% | |
TAAACGTTTCTATTTACAGG+TGG | - | chr5_2:11833454-11833473 | Msa0757110:intron | 30.0% | |
! | TCAGTTACTACGATTTTGAA+CGG | + | chr5_2:11833753-11833772 | None:intergenic | 30.0% |
! | ACAGAATATTTTGTGAGTGT+AGG | - | chr5_2:11833855-11833874 | Msa0757110:CDS | 30.0% |
TTCTCCAAAAAATATGCCAA+CGG | - | chr5_2:11833940-11833959 | Msa0757110:five_prime_UTR | 30.0% | |
!!! | AATTCCGTTGGCATATTTTT+TGG | + | chr5_2:11833947-11833966 | None:intergenic | 30.0% |
! | TTCTTGAAGAATGATTTTGC+AGG | - | chr5_2:11834087-11834106 | Msa0757110:five_prime_UTR | 30.0% |
AAGAAAAAATGTCAGCAAAG+TGG | + | chr5_2:11834236-11834255 | None:intergenic | 30.0% | |
! | ATTTAATATTTGGGATGTGG+TGG | - | chr5_2:11834343-11834362 | Msa0757110:five_prime_UTR | 30.0% |
! | TTTAATATTTGGGATGTGGT+GGG | - | chr5_2:11834344-11834363 | Msa0757110:five_prime_UTR | 30.0% |
AAAGATTAAGGTAGTTTCGT+TGG | - | chr5_2:11834383-11834402 | Msa0757110:five_prime_UTR | 30.0% | |
TCATCATCATCATGTATTTG+CGG | + | chr5_2:11832438-11832457 | None:intergenic | 30.0% | |
AAAATTATGAAGGGATCATG+GGG | + | chr5_2:11832476-11832495 | None:intergenic | 30.0% | |
GAAAATTATGAAGGGATCAT+GGG | + | chr5_2:11832477-11832496 | None:intergenic | 30.0% | |
TGCAAGTGGAAAATTATGAA+GGG | + | chr5_2:11832485-11832504 | None:intergenic | 30.0% | |
TTGCAAGTGGAAAATTATGA+AGG | + | chr5_2:11832486-11832505 | None:intergenic | 30.0% | |
!! | TGTTTTGTTGGAATAGGAAT+GGG | + | chr5_2:11832624-11832643 | None:intergenic | 30.0% |
! | TCCCTTGTTTAATCAGATAA+CGG | - | chr5_2:11832689-11832708 | Msa0757110:three_prime_UTR | 30.0% |
TGATAAGAAATTGAACGGTT+AGG | + | chr5_2:11832804-11832823 | None:intergenic | 30.0% | |
ATAGAAACGTTTAATGCGTT+AGG | + | chr5_2:11833447-11833466 | None:intergenic | 30.0% | |
TAAACGTTTCTATTTACAGG+TGG | - | chr5_2:11833454-11833473 | Msa0757110:intron | 30.0% | |
! | TCAGTTACTACGATTTTGAA+CGG | + | chr5_2:11833753-11833772 | None:intergenic | 30.0% |
! | ACAGAATATTTTGTGAGTGT+AGG | - | chr5_2:11833855-11833874 | Msa0757110:CDS | 30.0% |
TTCTCCAAAAAATATGCCAA+CGG | - | chr5_2:11833940-11833959 | Msa0757110:five_prime_UTR | 30.0% | |
!!! | AATTCCGTTGGCATATTTTT+TGG | + | chr5_2:11833947-11833966 | None:intergenic | 30.0% |
! | TTCTTGAAGAATGATTTTGC+AGG | - | chr5_2:11834087-11834106 | Msa0757110:five_prime_UTR | 30.0% |
AAGAAAAAATGTCAGCAAAG+TGG | + | chr5_2:11834236-11834255 | None:intergenic | 30.0% | |
! | ATTTAATATTTGGGATGTGG+TGG | - | chr5_2:11834343-11834362 | Msa0757110:five_prime_UTR | 30.0% |
! | TTTAATATTTGGGATGTGGT+GGG | - | chr5_2:11834344-11834363 | Msa0757110:five_prime_UTR | 30.0% |
AAAGATTAAGGTAGTTTCGT+TGG | - | chr5_2:11834383-11834402 | Msa0757110:five_prime_UTR | 30.0% | |
GGAAAATTATGAAGGGATCA+TGG | + | chr5_2:11832478-11832497 | None:intergenic | 35.0% | |
!! | TTTTGAGTGAAAAGTGCGTT+TGG | + | chr5_2:11832540-11832559 | None:intergenic | 35.0% |
!! | GTGTTTTGTTGGAATAGGAA+TGG | + | chr5_2:11832625-11832644 | None:intergenic | 35.0% |
!! | AAACGGTGTTTTGTTGGAAT+AGG | + | chr5_2:11832630-11832649 | None:intergenic | 35.0% |
GCCGTTATCTGATTAAACAA+GGG | + | chr5_2:11832693-11832712 | None:intergenic | 35.0% | |
AGAAATTGAACGGTTAGGAT+TGG | + | chr5_2:11832799-11832818 | None:intergenic | 35.0% | |
!!! | TGCTTTTTCTGCGATTTTTC+TGG | + | chr5_2:11832917-11832936 | None:intergenic | 35.0% |
TGATGAAATTCAGCGAAGTA+CGG | + | chr5_2:11833002-11833021 | None:intergenic | 35.0% | |
TCGCTGAATTTCATCATCAA+TGG | - | chr5_2:11833006-11833025 | Msa0757110:CDS | 35.0% | |
ATCAATGGAGATTTCTTCTC+AGG | - | chr5_2:11833021-11833040 | Msa0757110:CDS | 35.0% | |
GATCAAATCGTTAGATCTAG+AGG | - | chr5_2:11833273-11833292 | Msa0757110:intron | 35.0% | |
ACAGTGAAGAAGAATTTCAG+AGG | - | chr5_2:11833510-11833529 | Msa0757110:intron | 35.0% | |
TTCAAACGAGTTTGAGTCAA+TGG | - | chr5_2:11833892-11833911 | Msa0757110:exon | 35.0% | |
!! | TTTTTGGAGAAGAAATCGGA+CGG | + | chr5_2:11833931-11833950 | None:intergenic | 35.0% |
TATTGTGAAGGATGTTCCAT+TGG | - | chr5_2:11834121-11834140 | Msa0757110:five_prime_UTR | 35.0% | |
GGAAAATTATGAAGGGATCA+TGG | + | chr5_2:11832478-11832497 | None:intergenic | 35.0% | |
!! | TTTTGAGTGAAAAGTGCGTT+TGG | + | chr5_2:11832540-11832559 | None:intergenic | 35.0% |
!! | GTGTTTTGTTGGAATAGGAA+TGG | + | chr5_2:11832625-11832644 | None:intergenic | 35.0% |
!! | AAACGGTGTTTTGTTGGAAT+AGG | + | chr5_2:11832630-11832649 | None:intergenic | 35.0% |
GCCGTTATCTGATTAAACAA+GGG | + | chr5_2:11832693-11832712 | None:intergenic | 35.0% | |
AGAAATTGAACGGTTAGGAT+TGG | + | chr5_2:11832799-11832818 | None:intergenic | 35.0% | |
!!! | TGCTTTTTCTGCGATTTTTC+TGG | + | chr5_2:11832917-11832936 | None:intergenic | 35.0% |
TGATGAAATTCAGCGAAGTA+CGG | + | chr5_2:11833002-11833021 | None:intergenic | 35.0% | |
TCGCTGAATTTCATCATCAA+TGG | - | chr5_2:11833006-11833025 | Msa0757110:CDS | 35.0% | |
ATCAATGGAGATTTCTTCTC+AGG | - | chr5_2:11833021-11833040 | Msa0757110:CDS | 35.0% | |
GATCAAATCGTTAGATCTAG+AGG | - | chr5_2:11833273-11833292 | Msa0757110:intron | 35.0% | |
ACAGTGAAGAAGAATTTCAG+AGG | - | chr5_2:11833510-11833529 | Msa0757110:intron | 35.0% | |
TTCAAACGAGTTTGAGTCAA+TGG | - | chr5_2:11833892-11833911 | Msa0757110:exon | 35.0% | |
!! | TTTTTGGAGAAGAAATCGGA+CGG | + | chr5_2:11833931-11833950 | None:intergenic | 35.0% |
TATTGTGAAGGATGTTCCAT+TGG | - | chr5_2:11834121-11834140 | Msa0757110:five_prime_UTR | 35.0% | |
GAAACGCGATTATTTGCAAG+TGG | + | chr5_2:11832499-11832518 | None:intergenic | 40.0% | |
TAACTAACGGGGGATGAAAA+CGG | + | chr5_2:11832655-11832674 | None:intergenic | 40.0% | |
TGACACGTCGTTGTAACTAA+CGG | + | chr5_2:11832668-11832687 | None:intergenic | 40.0% | |
CGCCGTTATCTGATTAAACA+AGG | + | chr5_2:11832694-11832713 | None:intergenic | 40.0% | |
TCTCAAAACGGGGAATTTGA+CGG | + | chr5_2:11832717-11832736 | None:intergenic | 40.0% | |
!!! | GGATGATTGCTTTTTCGTAG+TGG | + | chr5_2:11832778-11832797 | None:intergenic | 40.0% |
TTACTATTCACACCTCACTC+TGG | + | chr5_2:11832957-11832976 | None:intergenic | 40.0% | |
GATGAAATTCAGCGAAGTAC+GGG | + | chr5_2:11833001-11833020 | None:intergenic | 40.0% | |
! | GAGATTTCTTCTCAGGTTGT+AGG | - | chr5_2:11833028-11833047 | Msa0757110:CDS | 40.0% |
TGAAGTTGTAGCTTCATCCA+TGG | + | chr5_2:11833083-11833102 | None:intergenic | 40.0% | |
GATTCTTCCTCAACTGGAAA+AGG | - | chr5_2:11833162-11833181 | Msa0757110:intron | 40.0% | |
! | TTTTCCTCCTTTTCCAGTTG+AGG | + | chr5_2:11833172-11833191 | None:intergenic | 40.0% |
GAAAAGGAGGAAAAATCCTC+CGG | - | chr5_2:11833178-11833197 | Msa0757110:intron | 40.0% | |
TTCTTCATCGGAGATATCAC+CGG | + | chr5_2:11833200-11833219 | None:intergenic | 40.0% | |
!! | CCTTTCTTCATCGAGTTGAA+CGG | + | chr5_2:11833254-11833273 | None:intergenic | 40.0% |
TCTTCAAGCTCAAATTCCGT+TGG | + | chr5_2:11833959-11833978 | None:intergenic | 40.0% | |
!! | TCGTTGGTTCGTTCTTTGAA+TGG | - | chr5_2:11834399-11834418 | Msa0757110:five_prime_UTR | 40.0% |
!! | CGTTGGTTCGTTCTTTGAAT+GGG | - | chr5_2:11834400-11834419 | Msa0757110:five_prime_UTR | 40.0% |
GAAACGCGATTATTTGCAAG+TGG | + | chr5_2:11832499-11832518 | None:intergenic | 40.0% | |
TAACTAACGGGGGATGAAAA+CGG | + | chr5_2:11832655-11832674 | None:intergenic | 40.0% | |
TGACACGTCGTTGTAACTAA+CGG | + | chr5_2:11832668-11832687 | None:intergenic | 40.0% | |
CGCCGTTATCTGATTAAACA+AGG | + | chr5_2:11832694-11832713 | None:intergenic | 40.0% | |
TCTCAAAACGGGGAATTTGA+CGG | + | chr5_2:11832717-11832736 | None:intergenic | 40.0% | |
!!! | GGATGATTGCTTTTTCGTAG+TGG | + | chr5_2:11832778-11832797 | None:intergenic | 40.0% |
TTACTATTCACACCTCACTC+TGG | + | chr5_2:11832957-11832976 | None:intergenic | 40.0% | |
GATGAAATTCAGCGAAGTAC+GGG | + | chr5_2:11833001-11833020 | None:intergenic | 40.0% | |
! | GAGATTTCTTCTCAGGTTGT+AGG | - | chr5_2:11833028-11833047 | Msa0757110:CDS | 40.0% |
TGAAGTTGTAGCTTCATCCA+TGG | + | chr5_2:11833083-11833102 | None:intergenic | 40.0% | |
GATTCTTCCTCAACTGGAAA+AGG | - | chr5_2:11833162-11833181 | Msa0757110:intron | 40.0% | |
! | TTTTCCTCCTTTTCCAGTTG+AGG | + | chr5_2:11833172-11833191 | None:intergenic | 40.0% |
GAAAAGGAGGAAAAATCCTC+CGG | - | chr5_2:11833178-11833197 | Msa0757110:intron | 40.0% | |
TTCTTCATCGGAGATATCAC+CGG | + | chr5_2:11833200-11833219 | None:intergenic | 40.0% | |
!! | CCTTTCTTCATCGAGTTGAA+CGG | + | chr5_2:11833254-11833273 | None:intergenic | 40.0% |
TCTTCAAGCTCAAATTCCGT+TGG | + | chr5_2:11833959-11833978 | None:intergenic | 40.0% | |
!! | TCGTTGGTTCGTTCTTTGAA+TGG | - | chr5_2:11834399-11834418 | Msa0757110:five_prime_UTR | 40.0% |
!! | CGTTGGTTCGTTCTTTGAAT+GGG | - | chr5_2:11834400-11834419 | Msa0757110:five_prime_UTR | 40.0% |
ATAGGAATGGGAAGAGGATG+AGG | + | chr5_2:11832612-11832631 | None:intergenic | 45.0% | |
GTTGGAATAGGAATGGGAAG+AGG | + | chr5_2:11832618-11832637 | None:intergenic | 45.0% | |
! | ACGGAGAAACGGTGTTTTGT+TGG | + | chr5_2:11832636-11832655 | None:intergenic | 45.0% |
ACACGTCGTTGTAACTAACG+GGG | + | chr5_2:11832666-11832685 | None:intergenic | 45.0% | |
GACACGTCGTTGTAACTAAC+GGG | + | chr5_2:11832667-11832686 | None:intergenic | 45.0% | |
GATTCCCCCGTCACTATTAA+CGG | - | chr5_2:11832735-11832754 | Msa0757110:exon | 45.0% | |
AGTCTCCGTTAATAGTGACG+GGG | + | chr5_2:11832743-11832762 | None:intergenic | 45.0% | |
CAGTCTCCGTTAATAGTGAC+GGG | + | chr5_2:11832744-11832763 | None:intergenic | 45.0% | |
CCAGTCTCCGTTAATAGTGA+CGG | + | chr5_2:11832745-11832764 | None:intergenic | 45.0% | |
!! | CTTTTTCGTAGTGGTGTGTG+TGG | + | chr5_2:11832769-11832788 | None:intergenic | 45.0% |
!! | TCGTCGGCGTTGAGAATTTT+CGG | + | chr5_2:11833144-11833163 | None:intergenic | 45.0% |
TCCAGTTGAGGAAGAATCGT+CGG | + | chr5_2:11833160-11833179 | None:intergenic | 45.0% | |
TCTTCCTCAACTGGAAAAGG+AGG | - | chr5_2:11833165-11833184 | Msa0757110:intron | 45.0% | |
ATTGCTTGAACAACAGGACG+CGG | + | chr5_2:11833227-11833246 | None:intergenic | 45.0% | |
GGATCCATTGCTTGAACAAC+AGG | + | chr5_2:11833233-11833252 | None:intergenic | 45.0% | |
CCGTTCAACTCGATGAAGAA+AGG | - | chr5_2:11833251-11833270 | Msa0757110:intron | 45.0% | |
GTGAAGGATGTTCCATTGGA+AGG | - | chr5_2:11834125-11834144 | Msa0757110:five_prime_UTR | 45.0% | |
!! | GGGATGTGGTGGGTTATTTA+TGG | - | chr5_2:11834354-11834373 | Msa0757110:five_prime_UTR | 45.0% |
ATAGGAATGGGAAGAGGATG+AGG | + | chr5_2:11832612-11832631 | None:intergenic | 45.0% | |
GTTGGAATAGGAATGGGAAG+AGG | + | chr5_2:11832618-11832637 | None:intergenic | 45.0% | |
! | ACGGAGAAACGGTGTTTTGT+TGG | + | chr5_2:11832636-11832655 | None:intergenic | 45.0% |
ACACGTCGTTGTAACTAACG+GGG | + | chr5_2:11832666-11832685 | None:intergenic | 45.0% | |
GACACGTCGTTGTAACTAAC+GGG | + | chr5_2:11832667-11832686 | None:intergenic | 45.0% | |
GATTCCCCCGTCACTATTAA+CGG | - | chr5_2:11832735-11832754 | Msa0757110:exon | 45.0% | |
AGTCTCCGTTAATAGTGACG+GGG | + | chr5_2:11832743-11832762 | None:intergenic | 45.0% | |
CAGTCTCCGTTAATAGTGAC+GGG | + | chr5_2:11832744-11832763 | None:intergenic | 45.0% | |
CCAGTCTCCGTTAATAGTGA+CGG | + | chr5_2:11832745-11832764 | None:intergenic | 45.0% | |
!! | CTTTTTCGTAGTGGTGTGTG+TGG | + | chr5_2:11832769-11832788 | None:intergenic | 45.0% |
!! | TCGTCGGCGTTGAGAATTTT+CGG | + | chr5_2:11833144-11833163 | None:intergenic | 45.0% |
TCCAGTTGAGGAAGAATCGT+CGG | + | chr5_2:11833160-11833179 | None:intergenic | 45.0% | |
TCTTCCTCAACTGGAAAAGG+AGG | - | chr5_2:11833165-11833184 | Msa0757110:intron | 45.0% | |
ATTGCTTGAACAACAGGACG+CGG | + | chr5_2:11833227-11833246 | None:intergenic | 45.0% | |
GGATCCATTGCTTGAACAAC+AGG | + | chr5_2:11833233-11833252 | None:intergenic | 45.0% | |
CCGTTCAACTCGATGAAGAA+AGG | - | chr5_2:11833251-11833270 | Msa0757110:intron | 45.0% | |
GTGAAGGATGTTCCATTGGA+AGG | - | chr5_2:11834125-11834144 | Msa0757110:five_prime_UTR | 45.0% | |
!! | GGGATGTGGTGGGTTATTTA+TGG | - | chr5_2:11834354-11834373 | Msa0757110:five_prime_UTR | 45.0% |
GGGGGATGAAAACGGAGAAA+CGG | + | chr5_2:11832647-11832666 | None:intergenic | 50.0% | |
CACGTCGTTGTAACTAACGG+GGG | + | chr5_2:11832665-11832684 | None:intergenic | 50.0% | |
TGACGGGGGAATCTCAAAAC+GGG | + | chr5_2:11832728-11832747 | None:intergenic | 50.0% | |
! | GTGACGGGGGAATCTCAAAA+CGG | + | chr5_2:11832729-11832748 | None:intergenic | 50.0% |
GTCTCCGTTAATAGTGACGG+GGG | + | chr5_2:11832742-11832761 | None:intergenic | 50.0% | |
CCGTCACTATTAACGGAGAC+TGG | - | chr5_2:11832742-11832761 | Msa0757110:exon | 50.0% | |
!! | TTGATAACGCGCGTGGAGTA+CGG | + | chr5_2:11832846-11832865 | None:intergenic | 50.0% |
ACACCTGAAAAGCCAGAGTG+AGG | - | chr5_2:11832942-11832961 | Msa0757110:CDS | 50.0% | |
!!! | ACACCTCACTCTGGCTTTTC+AGG | + | chr5_2:11832948-11832967 | None:intergenic | 50.0% |
! | CTTCTCAGGTTGTAGGTGTC+AGG | - | chr5_2:11833035-11833054 | Msa0757110:intron | 50.0% |
TTCATCGGAGATATCACCGG+AGG | + | chr5_2:11833197-11833216 | None:intergenic | 50.0% | |
GGACGCGGGAAATTCTTCAT+CGG | + | chr5_2:11833212-11833231 | None:intergenic | 50.0% | |
TTGCTTGAACAACAGGACGC+GGG | + | chr5_2:11833226-11833245 | None:intergenic | 50.0% | |
GCGTCCTGTTGTTCAAGCAA+TGG | - | chr5_2:11833226-11833245 | Msa0757110:intron | 50.0% | |
ATTGGAAGGACGCTACGAGT+GGG | - | chr5_2:11834139-11834158 | Msa0757110:five_prime_UTR | 50.0% | |
GGGGGATGAAAACGGAGAAA+CGG | + | chr5_2:11832647-11832666 | None:intergenic | 50.0% | |
CACGTCGTTGTAACTAACGG+GGG | + | chr5_2:11832665-11832684 | None:intergenic | 50.0% | |
TGACGGGGGAATCTCAAAAC+GGG | + | chr5_2:11832728-11832747 | None:intergenic | 50.0% | |
! | GTGACGGGGGAATCTCAAAA+CGG | + | chr5_2:11832729-11832748 | None:intergenic | 50.0% |
GTCTCCGTTAATAGTGACGG+GGG | + | chr5_2:11832742-11832761 | None:intergenic | 50.0% | |
CCGTCACTATTAACGGAGAC+TGG | - | chr5_2:11832742-11832761 | Msa0757110:exon | 50.0% | |
!! | TTGATAACGCGCGTGGAGTA+CGG | + | chr5_2:11832846-11832865 | None:intergenic | 50.0% |
ACACCTGAAAAGCCAGAGTG+AGG | - | chr5_2:11832942-11832961 | Msa0757110:CDS | 50.0% | |
!!! | ACACCTCACTCTGGCTTTTC+AGG | + | chr5_2:11832948-11832967 | None:intergenic | 50.0% |
! | CTTCTCAGGTTGTAGGTGTC+AGG | - | chr5_2:11833035-11833054 | Msa0757110:intron | 50.0% |
TTCATCGGAGATATCACCGG+AGG | + | chr5_2:11833197-11833216 | None:intergenic | 50.0% | |
GGACGCGGGAAATTCTTCAT+CGG | + | chr5_2:11833212-11833231 | None:intergenic | 50.0% | |
TTGCTTGAACAACAGGACGC+GGG | + | chr5_2:11833226-11833245 | None:intergenic | 50.0% | |
GCGTCCTGTTGTTCAAGCAA+TGG | - | chr5_2:11833226-11833245 | Msa0757110:intron | 50.0% | |
ATTGGAAGGACGCTACGAGT+GGG | - | chr5_2:11834139-11834158 | Msa0757110:five_prime_UTR | 50.0% | |
CTGCAGACTGCGTTTGCGTT+TGG | + | chr5_2:11832570-11832589 | None:intergenic | 55.0% | |
GACGGGGGAATCTCAAAACG+GGG | + | chr5_2:11832727-11832746 | None:intergenic | 55.0% | |
!! | GAGAGTGTTGATAACGCGCG+TGG | + | chr5_2:11832853-11832872 | None:intergenic | 55.0% |
CGCTCAAGCTGCATTAGCCA+TGG | - | chr5_2:11833063-11833082 | Msa0757110:intron | 55.0% | |
GCCGACGATTCTTCCTCAAC+TGG | - | chr5_2:11833156-11833175 | Msa0757110:intron | 55.0% | |
CACTCGTAGCGTCCTTCCAA+TGG | + | chr5_2:11834140-11834159 | None:intergenic | 55.0% | |
CATTGGAAGGACGCTACGAG+TGG | - | chr5_2:11834138-11834157 | Msa0757110:five_prime_UTR | 55.0% | |
CTGCAGACTGCGTTTGCGTT+TGG | + | chr5_2:11832570-11832589 | None:intergenic | 55.0% | |
GACGGGGGAATCTCAAAACG+GGG | + | chr5_2:11832727-11832746 | None:intergenic | 55.0% | |
!! | GAGAGTGTTGATAACGCGCG+TGG | + | chr5_2:11832853-11832872 | None:intergenic | 55.0% |
CGCTCAAGCTGCATTAGCCA+TGG | - | chr5_2:11833063-11833082 | Msa0757110:intron | 55.0% | |
GCCGACGATTCTTCCTCAAC+TGG | - | chr5_2:11833156-11833175 | Msa0757110:intron | 55.0% | |
CACTCGTAGCGTCCTTCCAA+TGG | + | chr5_2:11834140-11834159 | None:intergenic | 55.0% | |
CATTGGAAGGACGCTACGAG+TGG | - | chr5_2:11834138-11834157 | Msa0757110:five_prime_UTR | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 11832436 | 11834489 | 11832436 | ID=Msa0757110;Name=Msa0757110 |
chr5_2 | mRNA | 11832436 | 11834489 | 11832436 | ID=Msa0757110-mRNA-1;Parent=Msa0757110;Name=Msa0757110-mRNA-1;_AED=0.04;_eAED=0.04;_QI=589|1|1|1|1|1|4|311|182 |
chr5_2 | exon | 11832436 | 11832816 | 11832436 | ID=Msa0757110-mRNA-1:exon:5301;Parent=Msa0757110-mRNA-1 |
chr5_2 | exon | 11832899 | 11833048 | 11832899 | ID=Msa0757110-mRNA-1:exon:5300;Parent=Msa0757110-mRNA-1 |
chr5_2 | exon | 11833394 | 11833452 | 11833394 | ID=Msa0757110-mRNA-1:exon:5299;Parent=Msa0757110-mRNA-1 |
chr5_2 | exon | 11833631 | 11834489 | 11833631 | ID=Msa0757110-mRNA-1:exon:5298;Parent=Msa0757110-mRNA-1 |
chr5_2 | five_prime_UTR | 11833901 | 11834489 | 11833901 | ID=Msa0757110-mRNA-1:five_prime_utr;Parent=Msa0757110-mRNA-1 |
chr5_2 | CDS | 11833631 | 11833900 | 11833631 | ID=Msa0757110-mRNA-1:cds;Parent=Msa0757110-mRNA-1 |
chr5_2 | CDS | 11833394 | 11833452 | 11833394 | ID=Msa0757110-mRNA-1:cds;Parent=Msa0757110-mRNA-1 |
chr5_2 | CDS | 11832899 | 11833048 | 11832899 | ID=Msa0757110-mRNA-1:cds;Parent=Msa0757110-mRNA-1 |
chr5_2 | CDS | 11832747 | 11832816 | 11832747 | ID=Msa0757110-mRNA-1:cds;Parent=Msa0757110-mRNA-1 |
chr5_2 | three_prime_UTR | 11832436 | 11832746 | 11832436 | ID=Msa0757110-mRNA-1:three_prime_utr;Parent=Msa0757110-mRNA-1 |
Gene Sequence |
Protein sequence |