AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1198530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198530 MtrunA17_Chr8g0368151 98.163 490 9 0 1 490 1 490 0.0 994
Msa1198530 MtrunA17_Chr1g0194521 38.462 455 266 6 29 483 99 539 6.17e-93 292
Msa1198530 MtrunA17_Chr1g0185601 32.955 440 283 6 55 489 69 501 5.38e-81 260
Msa1198530 MtrunA17_Chr2g0282091 31.788 453 305 3 24 475 29 478 4.36e-79 255
Msa1198530 MtrunA17_Chr8g0359961 30.093 432 298 4 25 455 35 463 7.84e-73 239
Msa1198530 MtrunA17_Chr2g0303221 33.253 415 267 8 23 433 31 439 2.39e-68 227
Msa1198530 MtrunA17_Chr4g0021331 32.184 435 283 7 6 433 8 437 3.03e-68 226
Msa1198530 MtrunA17_Chr3g0132571 28.000 450 316 5 43 488 57 502 3.93e-58 200
Msa1198530 MtrunA17_Chr2g0324251 30.238 420 279 7 28 438 37 451 8.87e-55 191
Msa1198530 MtrunA17_Chr1g0155351 33.435 329 216 3 43 368 74 402 1.59e-52 182
Msa1198530 MtrunA17_Chr7g0256181 27.311 476 322 11 15 484 150 607 8.84e-46 169
Msa1198530 MtrunA17_Chr1g0171501 28.062 449 301 10 35 477 151 583 6.18e-40 152
Msa1198530 MtrunA17_Chr8g0335951 30.075 266 179 3 219 484 190 448 1.31e-35 137
Msa1198530 MtrunA17_Chr8g0335951 22.867 293 200 4 1 270 57 346 6.80e-14 73.6
Msa1198530 MtrunA17_Chr2g0328121 23.762 505 357 9 7 490 12 509 4.94e-32 128
Msa1198530 MtrunA17_Chr8g0349421 30.705 241 160 3 244 484 3 236 2.37e-31 121
Msa1198530 MtrunA17_Chr6g0473381 24.919 309 225 3 122 430 22 323 1.36e-20 93.2
Msa1198530 MtrunA17_Chr5g0446031 22.278 395 298 3 72 464 429 816 5.03e-19 90.5
Msa1198530 MtrunA17_Chr5g0446031 23.099 342 217 6 120 460 236 532 7.55e-14 74.3
Msa1198530 MtrunA17_Chr5g0446031 20.000 420 286 5 85 464 92 501 5.29e-13 71.6
Msa1198530 MtrunA17_Chr5g0446031 21.538 325 245 4 77 399 574 890 4.36e-12 68.9
Msa1198530 MtrunA17_Chr7g0218641 21.717 396 279 3 58 453 158 522 2.93e-18 87.8
Msa1198530 MtrunA17_Chr8g0369641 23.204 362 264 5 71 427 436 788 4.20e-18 87.8
Msa1198530 MtrunA17_Chr8g0369641 23.743 358 255 8 126 477 318 663 1.41e-12 70.1
Msa1198530 MtrunA17_Chr1g0210801 23.496 349 223 6 97 443 249 555 3.10e-17 84.3
Msa1198530 MtrunA17_Chr1g0210801 18.640 397 313 4 63 459 80 466 8.55e-11 64.3
Msa1198530 MtrunA17_Chr8g0392911 26.894 264 187 4 122 382 194 454 4.98e-17 84.3
Msa1198530 MtrunA17_Chr8g0392911 24.638 345 215 7 126 434 338 673 2.07e-14 75.9
Msa1198530 MtrunA17_Chr4g0059671 24.020 408 287 8 62 459 109 503 6.86e-17 84.0
Msa1198530 MtrunA17_Chr6g0473031 23.810 252 191 1 126 377 214 464 1.53e-16 82.4
Msa1198530 MtrunA17_Chr6g0473261 25.292 257 181 3 126 377 248 498 2.27e-16 82.0
Msa1198530 MtrunA17_Chr6g0473481 25.292 257 181 3 126 377 200 450 5.88e-16 80.5
Msa1198530 MtrunA17_Chr6g0473511 25.292 257 181 3 126 377 200 450 5.88e-16 80.5
Msa1198530 MtrunA17_Chr6g0473341 22.222 252 195 1 126 377 200 450 5.99e-16 80.5
Msa1198530 MtrunA17_Chr6g0473351 25.681 257 177 4 126 377 200 447 7.16e-16 80.1
Msa1198530 MtrunA17_Chr6g0473241 22.222 252 195 1 126 377 200 450 1.09e-15 79.7
Msa1198530 MtrunA17_Chr5g0396041 23.571 280 207 2 159 438 337 609 1.19e-15 80.5
Msa1198530 MtrunA17_Chr5g0396041 25.000 240 179 1 126 365 374 612 7.39e-15 77.8
Msa1198530 MtrunA17_Chr1g0211881 25.625 320 223 6 117 433 206 513 1.37e-15 79.3
Msa1198530 MtrunA17_Chr3g0143851 21.408 341 261 2 139 479 297 630 1.39e-15 79.7
Msa1198530 MtrunA17_Chr4g0033981 23.494 332 237 5 108 433 270 590 1.48e-15 79.3
Msa1198530 MtrunA17_Chr8g0365781 23.150 419 260 10 74 464 404 788 1.64e-15 79.7
Msa1198530 MtrunA17_Chr1g0162281 23.077 364 260 7 126 480 122 474 1.69e-15 79.3
Msa1198530 MtrunA17_Chr1g0162281 19.429 350 251 5 126 473 407 727 1.04e-11 67.4
Msa1198530 MtrunA17_Chr7g0220501 23.423 333 243 6 71 396 264 591 1.73e-15 79.7
Msa1198530 MtrunA17_Chr7g0220481 21.829 339 247 6 60 396 234 556 3.04e-15 78.6
Msa1198530 MtrunA17_Chr7g0220481 21.348 267 206 3 126 390 216 480 2.61e-11 66.2
Msa1198530 MtrunA17_Chr5g0434021 21.990 382 282 6 97 474 300 669 3.17e-15 79.0
Msa1198530 MtrunA17_Chr8g0349431 34.188 117 75 1 36 150 6 122 3.63e-15 72.0
Msa1198530 MtrunA17_Chr3g0089851 23.016 252 192 2 126 376 206 456 4.50e-15 77.4
Msa1198530 MtrunA17_Chr3g0091741 21.910 356 269 3 57 404 90 444 4.68e-15 77.8
Msa1198530 MtrunA17_Chr1g0147171 23.032 343 246 8 122 458 143 473 7.35e-15 77.4
Msa1198530 MtrunA17_Chr6g0473431 23.810 252 188 2 126 377 203 450 8.93e-15 76.6
Msa1198530 MtrunA17_Chr5g0412071 22.888 367 270 7 109 471 314 671 2.28e-14 75.9
Msa1198530 MtrunA17_Chr6g0471871 21.687 332 253 2 122 453 207 531 2.39e-14 75.5
Msa1198530 MtrunA17_Chr6g0471531 21.583 278 217 1 122 399 218 494 2.55e-14 75.5
Msa1198530 MtrunA17_Chr6g0478691 23.077 260 195 3 126 383 281 537 2.65e-14 75.5
Msa1198530 MtrunA17_Chr6g0478551 21.739 345 224 6 122 464 196 496 2.93e-14 75.1
Msa1198530 MtrunA17_Chr3g0136851 21.397 458 334 8 39 480 208 655 3.16e-14 75.5
Msa1198530 MtrunA17_Chr7g0236501 21.825 252 195 2 126 376 224 474 3.65e-14 74.7
Msa1198530 MtrunA17_Chr7g0246931 24.069 349 220 7 122 433 174 514 3.77e-14 74.7
Msa1198530 MtrunA17_Chr8g0368891 22.984 248 190 1 122 369 415 661 4.66e-14 74.7
Msa1198530 MtrunA17_Chr6g0473251 24.125 257 181 4 126 377 200 447 5.11e-14 74.3
Msa1198530 MtrunA17_Chr6g0473471 21.032 252 198 1 126 377 95 345 5.32e-14 73.9
Msa1198530 MtrunA17_Chr6g0473501 21.032 252 198 1 126 377 95 345 5.35e-14 73.9
Msa1198530 MtrunA17_Chr2g0277851 18.868 318 251 2 141 458 192 502 6.50e-14 74.3
Msa1198530 MtrunA17_Chr4g0030691 20.937 363 243 5 105 465 127 447 1.35e-13 72.8
Msa1198530 MtrunA17_Chr6g0473311 25.000 260 190 3 120 377 11 267 1.91e-13 71.2
Msa1198530 MtrunA17_Chr6g0482551 21.101 327 224 5 62 386 166 460 1.96e-13 72.4
Msa1198530 MtrunA17_Chr3g0099661 21.538 455 322 9 43 490 424 850 2.23e-13 72.8
Msa1198530 MtrunA17_Chr3g0099661 20.974 267 209 2 124 389 277 542 4.45e-11 65.5
Msa1198530 MtrunA17_Chr6g0482571 23.744 219 166 1 159 377 96 313 2.48e-13 71.6
Msa1198530 MtrunA17_Chr6g0482571 23.967 242 181 3 122 362 164 403 2.72e-11 65.5
Msa1198530 MtrunA17_Chr4g0047591 22.350 349 255 4 120 464 459 795 2.49e-13 72.8
Msa1198530 MtrunA17_Chr6g0472611 23.828 256 194 1 122 377 202 456 3.29e-13 72.0
Msa1198530 MtrunA17_Chr4g0060341 20.904 354 234 7 126 440 203 549 3.61e-13 72.0
Msa1198530 MtrunA17_Chr8g0353181 21.258 461 298 11 56 480 82 513 3.85e-13 71.6
Msa1198530 MtrunA17_Chr2g0297211 20.698 401 301 6 71 465 230 619 5.52e-13 71.6
Msa1198530 MtrunA17_Chr6g0481971 22.311 251 159 3 126 376 304 518 7.35e-13 70.9
Msa1198530 MtrunA17_Chr6g0481971 19.136 324 259 2 56 377 57 379 5.79e-11 64.7
Msa1198530 MtrunA17_Chr6g0473441 21.429 252 197 1 126 377 200 450 9.26e-13 70.5
Msa1198530 MtrunA17_Chr4g0037841 20.904 354 234 7 126 440 203 549 1.07e-12 70.5
Msa1198530 MtrunA17_Chr4g0037841 23.715 253 157 4 122 374 342 558 6.00e-11 64.7
Msa1198530 MtrunA17_Chr4g0037841 20.681 382 250 6 133 472 140 510 7.94e-11 64.3
Msa1198530 MtrunA17_Chr6g0473491 21.032 252 198 1 126 377 200 450 1.10e-12 70.1
Msa1198530 MtrunA17_Chr6g0483431 21.596 426 242 12 37 397 11 409 1.16e-12 69.7
Msa1198530 MtrunA17_Chr2g0331911 21.875 256 198 2 145 399 358 612 1.16e-12 70.5
Msa1198530 MtrunA17_Chr7g0241721 22.394 259 198 3 126 383 25 281 1.19e-12 70.1
Msa1198530 MtrunA17_Chr6g0479541 20.708 367 283 3 30 394 205 565 1.24e-12 70.1
Msa1198530 MtrunA17_Chr5g0419551 20.285 281 222 2 120 399 351 630 1.91e-12 69.7
Msa1198530 MtrunA17_Chr1g0171281 23.810 252 191 1 126 377 201 451 2.18e-12 69.3
Msa1198530 MtrunA17_Chr1g0162221 23.232 198 149 2 97 292 373 569 2.40e-12 69.3
Msa1198530 MtrunA17_Chr1g0160881 22.951 366 261 9 122 480 241 592 2.49e-12 69.3
Msa1198530 MtrunA17_Chr1g0160881 21.739 322 241 5 71 387 363 678 1.71e-11 66.6
Msa1198530 MtrunA17_Chr6g0482611 21.260 254 195 3 126 377 211 461 2.81e-12 68.9
Msa1198530 MtrunA17_Chr6g0482601 21.344 253 194 3 126 376 118 367 2.99e-12 68.6
Msa1198530 MtrunA17_Chr6g0481991 20.611 262 207 1 122 383 232 492 3.15e-12 68.9
Msa1198530 MtrunA17_Chr7g0256621 22.289 332 236 6 142 465 169 486 3.38e-12 68.6
Msa1198530 MtrunA17_Chr1g0181661 29.630 162 110 2 107 267 417 575 4.26e-12 68.6
Msa1198530 MtrunA17_Chr5g0442231 21.515 330 246 5 95 420 377 697 4.28e-12 68.6
Msa1198530 MtrunA17_Chr5g0442231 19.155 355 275 4 127 480 309 652 7.11e-12 67.8
Msa1198530 MtrunA17_Chr8g0375231 23.077 247 189 1 126 372 257 502 4.61e-12 68.6
Msa1198530 MtrunA17_Chr1g0182521 20.506 395 305 3 74 466 221 608 4.68e-12 68.6
Msa1198530 MtrunA17_Chr1g0194281 24.752 202 149 3 124 324 232 431 5.18e-12 68.2
Msa1198530 MtrunA17_Chr6g0482971 21.429 266 198 5 126 386 197 456 5.99e-12 67.8
Msa1198530 MtrunA17_Chr7g0241871 21.164 378 250 7 43 377 117 489 6.68e-12 68.2
Msa1198530 MtrunA17_Chr6g0481621 19.585 337 268 2 43 377 73 408 8.03e-12 67.4
Msa1198530 MtrunA17_Chr3g0126831 21.389 360 250 6 140 490 422 757 8.34e-12 67.8
Msa1198530 MtrunA17_Chr6g0482561 21.311 305 202 4 74 376 96 364 9.17e-12 66.6
Msa1198530 MtrunA17_Chr2g0292711 21.978 273 201 3 126 394 226 490 9.84e-12 67.4
Msa1198530 MtrunA17_Chr2g0297991 22.909 275 199 4 126 394 556 823 1.02e-11 67.4
Msa1198530 MtrunA17_Chr2g0297991 21.033 542 333 12 11 483 321 836 4.44e-11 65.5
Msa1198530 MtrunA17_Chr5g0434451 22.264 265 202 2 126 387 299 562 1.46e-11 66.6
Msa1198530 MtrunA17_Chr2g0296811 23.834 193 144 2 81 271 1 192 1.52e-11 63.9
Msa1198530 MtrunA17_Chr3g0102961 20.433 323 226 5 58 377 168 462 1.76e-11 66.2
Msa1198530 MtrunA17_Chr8g0387281 22.028 286 188 3 122 372 314 599 1.99e-11 66.6
Msa1198530 MtrunA17_Chr6g0473331 20.743 323 225 5 58 377 194 488 2.15e-11 66.2
Msa1198530 MtrunA17_Chr4g0039041 20.956 272 214 1 126 397 467 737 2.44e-11 66.2
Msa1198530 MtrunA17_Chr7g0214351 22.368 380 278 8 62 436 283 650 2.69e-11 66.2
Msa1198530 MtrunA17_Chr7g0217921 22.569 288 209 4 126 407 403 682 2.77e-11 66.2
Msa1198530 MtrunA17_Chr6g0482541 22.047 254 193 3 126 377 45 295 2.83e-11 65.1
Msa1198530 MtrunA17_Chr6g0476151 21.887 265 206 1 122 386 199 462 3.15e-11 65.5
Msa1198530 MtrunA17_Chr0c20g0493831 25.000 204 152 1 160 362 141 344 3.67e-11 65.5
Msa1198530 MtrunA17_Chr4g0069231 25.000 204 152 1 160 362 141 344 3.68e-11 65.1
Msa1198530 MtrunA17_Chr1g0168811 21.053 247 194 1 126 372 290 535 3.99e-11 65.5
Msa1198530 MtrunA17_Chr3g0121341 21.807 321 241 5 161 478 163 476 4.22e-11 65.5
Msa1198530 MtrunA17_Chr6g0471481 21.583 278 206 2 122 399 22 287 4.40e-11 63.9
Msa1198530 MtrunA17_Chr1g0196741 24.490 245 175 5 125 365 461 699 4.63e-11 65.5
Msa1198530 MtrunA17_Chr1g0170071 19.797 394 259 9 85 465 359 708 5.47e-11 65.5
Msa1198530 MtrunA17_Chr7g0215561 21.849 357 265 7 62 413 282 629 8.71e-11 64.3
Msa1198530 MtrunA17_Chr2g0290441 19.811 318 251 3 62 376 156 472 9.06e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198530 AT1G60770.1 65.574 488 167 1 4 490 3 490 0.0 696
Msa1198530 AT1G02370.1 41.667 456 261 3 33 487 84 535 2.98e-120 363
Msa1198530 AT4G01990.1 39.248 479 280 5 12 487 30 500 7.63e-107 327
Msa1198530 AT1G02150.1 34.467 441 283 3 2 439 46 483 8.14e-84 268
Msa1198530 AT4G02820.1 34.014 441 283 5 50 489 88 521 2.62e-82 265
Msa1198530 AT4G21705.1 31.906 467 314 4 24 488 26 490 1.91e-80 259
Msa1198530 AT5G27460.1 29.867 452 309 4 28 474 43 491 6.46e-64 215
Msa1198530 AT2G20710.1 30.227 440 295 7 23 459 38 468 1.80e-61 209
Msa1198530 AT2G20710.2 32.345 371 240 6 91 459 12 373 4.20e-58 197
Msa1198530 AT5G09450.1 31.373 306 206 4 43 344 75 380 2.28e-45 164
Msa1198530 AT1G80270.1 28.125 448 299 10 37 477 142 573 1.55e-43 162
Msa1198530 AT1G80270.3 28.125 448 299 10 37 477 142 573 1.55e-43 162
Msa1198530 AT1G80270.2 28.125 448 299 10 37 477 142 573 1.55e-43 162
Msa1198530 AT1G80270.5 28.125 448 299 10 37 477 142 573 1.55e-43 162
Msa1198530 AT1G80270.4 28.125 448 299 10 37 477 142 573 1.55e-43 162
Msa1198530 AT1G28020.1 28.670 436 287 9 40 461 60 485 6.15e-43 159
Msa1198530 AT1G15480.1 26.802 444 314 6 35 477 138 571 2.05e-40 154
Msa1198530 AT3G15590.1 27.511 458 311 9 31 478 141 587 5.13e-34 135
Msa1198530 AT3G15590.2 27.511 458 311 9 31 478 141 587 5.13e-34 135
Msa1198530 AT1G07590.1 24.190 463 331 6 37 489 79 531 6.24e-27 114
Msa1198530 AT3G11380.1 29.766 299 174 5 62 356 82 348 4.54e-26 111
Msa1198530 AT3G11380.1 30.769 208 136 4 11 215 339 541 1.69e-17 85.9
Msa1198530 AT2G35130.1 24.731 372 230 8 74 440 248 574 1.99e-20 95.1
Msa1198530 AT2G35130.3 24.731 372 230 8 74 440 245 571 2.26e-20 94.7
Msa1198530 AT2G35130.2 24.731 372 230 8 74 440 270 596 2.30e-20 94.7
Msa1198530 AT3G06920.2 21.883 393 298 3 74 464 410 795 1.26e-17 86.7
Msa1198530 AT3G06920.2 22.626 358 269 3 126 483 185 534 5.32e-17 84.7
Msa1198530 AT3G06920.2 22.263 274 205 2 126 399 604 869 3.96e-12 69.3
Msa1198530 AT3G06920.3 21.883 393 298 3 74 464 410 795 1.26e-17 86.7
Msa1198530 AT3G06920.3 22.626 358 269 3 126 483 185 534 5.32e-17 84.7
Msa1198530 AT3G06920.3 22.263 274 205 2 126 399 604 869 3.96e-12 69.3
Msa1198530 AT3G06920.1 21.883 393 298 3 74 464 396 781 1.33e-17 86.7
Msa1198530 AT3G06920.1 22.626 358 269 3 126 483 171 520 6.29e-17 84.3
Msa1198530 AT3G06920.1 22.263 274 205 2 126 399 590 855 4.25e-12 69.3
Msa1198530 AT5G39980.1 26.848 257 187 1 120 376 187 442 1.97e-17 85.9
Msa1198530 AT5G39980.1 20.923 325 246 4 157 478 154 470 1.13e-12 70.9
Msa1198530 AT5G39980.1 19.847 262 190 5 121 376 398 645 2.55e-11 66.6
Msa1198530 AT1G03560.1 21.176 340 226 3 125 464 154 451 7.01e-17 84.0
Msa1198530 AT1G09680.1 23.938 259 196 1 126 384 313 570 8.01e-17 84.0
Msa1198530 AT1G09680.1 21.233 292 223 2 126 417 243 527 3.20e-12 69.3
Msa1198530 AT5G65560.1 22.951 366 239 6 122 487 392 714 3.76e-16 82.0
Msa1198530 AT5G65560.2 22.951 366 239 6 122 487 392 714 3.76e-16 82.0
Msa1198530 AT5G65560.3 22.951 366 239 6 122 487 392 714 3.76e-16 82.0
Msa1198530 AT2G02150.1 22.709 251 193 1 126 376 265 514 9.65e-16 80.5
Msa1198530 AT2G02150.2 22.709 251 193 1 126 376 265 514 9.65e-16 80.5
Msa1198530 AT5G12100.1 29.710 276 179 7 126 394 217 484 1.31e-15 80.1
Msa1198530 AT5G12100.1 20.833 432 326 7 40 464 161 583 6.87e-11 65.5
Msa1198530 AT5G02860.1 25.000 276 171 4 124 399 455 694 2.63e-15 79.3
Msa1198530 AT5G02860.1 21.616 458 303 9 32 479 112 523 1.45e-13 73.9
Msa1198530 AT5G02860.1 21.790 257 200 1 120 376 276 531 2.03e-13 73.6
Msa1198530 AT5G02860.1 23.016 252 193 1 126 377 527 777 7.03e-13 71.6
Msa1198530 AT5G02860.1 25.980 204 148 2 109 310 613 815 7.03e-13 71.6
Msa1198530 AT5G02860.4 25.000 276 171 4 124 399 455 694 2.63e-15 79.3
Msa1198530 AT5G02860.4 21.616 458 303 9 32 479 112 523 1.45e-13 73.9
Msa1198530 AT5G02860.4 21.790 257 200 1 120 376 276 531 2.03e-13 73.6
Msa1198530 AT5G02860.4 23.016 252 193 1 126 377 527 777 7.03e-13 71.6
Msa1198530 AT5G02860.4 25.980 204 148 2 109 310 613 815 7.03e-13 71.6
Msa1198530 AT5G02860.2 25.000 276 171 4 124 399 455 694 2.63e-15 79.3
Msa1198530 AT5G02860.2 21.616 458 303 9 32 479 112 523 1.45e-13 73.9
Msa1198530 AT5G02860.2 21.790 257 200 1 120 376 276 531 2.03e-13 73.6
Msa1198530 AT5G02860.2 23.016 252 193 1 126 377 527 777 7.03e-13 71.6
Msa1198530 AT5G02860.2 25.980 204 148 2 109 310 613 815 7.03e-13 71.6
Msa1198530 AT5G02860.5 25.000 276 171 4 124 399 455 694 2.63e-15 79.3
Msa1198530 AT5G02860.5 21.616 458 303 9 32 479 112 523 1.45e-13 73.9
Msa1198530 AT5G02860.5 21.790 257 200 1 120 376 276 531 2.03e-13 73.6
Msa1198530 AT5G02860.5 23.016 252 193 1 126 377 527 777 7.03e-13 71.6
Msa1198530 AT5G02860.5 25.980 204 148 2 109 310 613 815 7.03e-13 71.6
Msa1198530 AT5G02860.3 25.000 276 171 4 124 399 455 694 2.63e-15 79.3
Msa1198530 AT5G02860.3 21.616 458 303 9 32 479 112 523 1.45e-13 73.9
Msa1198530 AT5G02860.3 21.790 257 200 1 120 376 276 531 2.03e-13 73.6
Msa1198530 AT5G02860.3 23.016 252 193 1 126 377 527 777 7.03e-13 71.6
Msa1198530 AT5G02860.3 25.980 204 148 2 109 310 613 815 7.03e-13 71.6
Msa1198530 AT2G18940.1 22.677 269 207 1 126 394 529 796 3.98e-15 79.0
Msa1198530 AT1G62590.2 23.392 342 217 5 77 416 318 616 1.40e-14 76.6
Msa1198530 AT1G62590.1 23.392 342 217 5 77 416 318 616 1.40e-14 76.6
Msa1198530 AT5G61990.1 24.150 294 213 6 102 388 534 824 1.48e-14 77.0
Msa1198530 AT5G61990.1 22.348 264 204 1 122 385 451 713 3.55e-13 72.8
Msa1198530 AT2G31400.1 23.759 282 212 2 111 390 325 605 1.48e-14 77.0
Msa1198530 AT2G31400.1 26.761 213 153 2 70 280 354 565 3.53e-13 72.8
Msa1198530 AT1G28000.1 25.442 283 201 7 21 297 31 309 1.68e-14 75.5
Msa1198530 AT2G31400.2 23.759 282 212 2 111 390 325 605 1.94e-14 76.6
Msa1198530 AT2G31400.2 25.100 251 184 3 33 280 316 565 3.54e-13 72.8
Msa1198530 AT1G63230.1 24.922 321 195 7 121 439 39 315 2.54e-14 74.3
Msa1198530 AT3G53170.4 21.379 290 226 2 111 399 153 441 2.75e-14 75.5
Msa1198530 AT5G04810.2 20.056 354 276 2 126 479 347 693 3.94e-14 75.5
Msa1198530 AT1G64583.2 19.382 356 280 2 126 481 84 432 4.03e-14 75.1
Msa1198530 AT5G04810.1 20.056 354 276 2 126 479 347 693 4.25e-14 75.5
Msa1198530 AT1G64583.1 19.382 356 280 2 126 481 109 457 4.73e-14 74.7
Msa1198530 AT1G66345.1 21.995 441 293 9 84 490 107 530 5.94e-14 74.7
Msa1198530 AT1G62930.1 24.638 345 254 3 38 377 270 613 6.50e-14 74.7
Msa1198530 AT3G53170.2 21.377 276 215 2 111 385 203 477 7.87e-14 73.9
Msa1198530 AT3G53170.1 21.377 276 215 2 111 385 203 477 7.87e-14 73.9
Msa1198530 AT3G59040.1 26.552 290 196 7 117 399 205 484 8.51e-14 74.3
Msa1198530 AT3G59040.1 25.472 212 157 1 145 356 301 511 5.59e-13 71.6
Msa1198530 AT1G77360.2 20.819 293 223 2 160 452 134 417 8.88e-14 73.9
Msa1198530 AT1G77360.2 25.000 372 249 13 52 414 99 449 2.17e-12 69.7
Msa1198530 AT1G77360.1 20.819 293 223 2 160 452 170 453 1.12e-13 73.6
Msa1198530 AT1G77360.1 25.000 372 249 13 52 414 135 485 2.96e-12 69.3
Msa1198530 AT3G59040.2 26.971 241 168 4 161 399 257 491 1.20e-13 73.9
Msa1198530 AT3G59040.2 25.472 212 157 1 145 356 308 518 5.18e-13 71.6
Msa1198530 AT3G06430.1 24.020 204 154 1 160 362 126 329 2.41e-13 72.4
Msa1198530 AT2G17140.1 21.168 274 211 2 108 376 165 438 2.85e-13 72.8
Msa1198530 AT2G17140.2 21.168 274 211 2 108 376 165 438 2.85e-13 72.8
Msa1198530 AT1G64100.2 20.886 316 235 5 126 439 229 531 3.23e-13 72.8
Msa1198530 AT3G22470.1 20.845 355 270 4 128 480 180 525 3.53e-13 72.4
Msa1198530 AT2G32630.1 23.055 347 258 5 145 490 211 549 3.65e-13 72.4
Msa1198530 AT1G64100.1 20.886 316 235 5 126 439 229 531 3.76e-13 72.4
Msa1198530 AT1G64100.3 20.886 316 235 5 126 439 229 531 3.76e-13 72.4
Msa1198530 AT1G09900.1 21.324 272 204 2 163 434 142 403 4.63e-13 72.0
Msa1198530 AT1G09900.1 21.471 340 255 4 128 466 142 470 1.90e-12 70.1
Msa1198530 AT1G63330.3 23.099 342 218 5 77 416 243 541 6.71e-13 71.2
Msa1198530 AT1G63330.1 23.099 342 218 5 77 416 243 541 6.71e-13 71.2
Msa1198530 AT1G63330.2 23.099 342 218 5 77 416 243 541 6.71e-13 71.2
Msa1198530 AT1G62670.2 22.835 254 195 1 124 377 257 509 7.88e-13 71.2
Msa1198530 AT1G62670.2 23.667 300 226 2 74 371 310 608 1.23e-11 67.4
Msa1198530 AT1G62670.1 22.835 254 195 1 124 377 257 509 7.88e-13 71.2
Msa1198530 AT1G62670.1 23.667 300 226 2 74 371 310 608 1.23e-11 67.4
Msa1198530 AT3G53700.1 20.670 358 270 6 128 480 264 612 8.24e-13 71.2
Msa1198530 AT3G53700.1 21.533 274 214 1 126 399 298 570 1.86e-11 67.0
Msa1198530 AT2G41720.2 22.222 324 241 5 159 480 189 503 1.08e-12 70.9
Msa1198530 AT2G41720.3 22.222 324 241 5 159 480 321 635 1.40e-12 70.9
Msa1198530 AT3G16010.1 25.000 284 205 3 114 390 288 570 1.60e-12 70.5
Msa1198530 AT3G16010.1 22.374 219 168 2 159 376 374 591 1.50e-11 67.4
Msa1198530 AT2G41720.1 22.222 324 241 5 159 480 321 635 1.66e-12 70.5
Msa1198530 AT4G20090.2 22.780 259 196 2 122 377 326 583 2.27e-12 69.7
Msa1198530 AT4G20090.1 22.780 259 196 2 122 377 326 583 2.27e-12 69.7
Msa1198530 AT1G12300.1 24.671 304 226 2 76 377 319 621 2.53e-12 69.7
Msa1198530 AT1G12300.1 20.354 339 259 4 128 464 198 527 5.21e-11 65.5
Msa1198530 AT1G43010.1 28.302 212 135 5 43 248 56 256 2.66e-12 67.4
Msa1198530 AT1G63070.1 22.925 253 193 2 126 377 218 469 3.10e-12 69.3
Msa1198530 AT3G09650.1 25.000 204 148 3 89 291 457 656 3.27e-12 69.3
Msa1198530 AT1G09820.1 21.348 356 230 5 122 472 222 532 3.31e-12 69.3
Msa1198530 AT1G51965.1 22.910 323 243 3 74 394 292 610 3.46e-12 69.3
Msa1198530 AT1G51965.1 23.616 271 199 7 126 394 241 505 5.02e-11 65.5
Msa1198530 AT1G74750.2 22.628 274 203 4 192 464 358 623 4.07e-12 69.3
Msa1198530 AT1G74750.1 22.628 274 203 4 192 464 358 623 4.07e-12 69.3
Msa1198530 AT1G74750.4 22.628 274 203 4 192 464 358 623 4.07e-12 69.3
Msa1198530 AT1G74750.3 22.628 274 203 4 192 464 358 623 4.07e-12 69.3
Msa1198530 AT1G74850.1 24.903 257 156 4 122 377 140 360 4.31e-12 69.3
Msa1198530 AT3G23020.1 21.315 441 329 8 27 459 229 659 5.39e-12 68.9
Msa1198530 AT4G11690.2 25.444 169 125 1 122 290 275 442 6.12e-12 68.2
Msa1198530 AT4G11690.1 25.444 169 125 1 122 290 302 469 6.27e-12 68.2
Msa1198530 AT4G11690.1 22.348 264 190 3 120 376 195 450 7.69e-11 64.7
Msa1198530 AT3G53170.3 21.190 269 203 2 126 385 182 450 6.47e-12 68.2
Msa1198530 AT1G12775.1 20.714 280 221 1 120 399 330 608 7.67e-12 68.2
Msa1198530 AT1G12775.1 23.026 304 231 2 76 377 319 621 9.41e-11 64.7
Msa1198530 AT1G12620.1 22.388 268 189 5 126 384 320 577 7.68e-12 68.2
Msa1198530 AT1G12620.1 23.684 304 229 2 76 377 303 605 8.58e-11 64.7
Msa1198530 AT5G14770.2 23.670 376 246 7 65 400 306 680 7.99e-12 68.6
Msa1198530 AT5G14770.5 23.670 376 246 7 65 400 306 680 7.99e-12 68.6
Msa1198530 AT5G14770.4 23.670 376 246 7 65 400 306 680 7.99e-12 68.6
Msa1198530 AT5G14770.1 23.670 376 246 7 65 400 306 680 7.99e-12 68.6
Msa1198530 AT5G14770.3 23.670 376 246 7 65 400 306 680 7.99e-12 68.6
Msa1198530 AT3G04130.1 27.119 236 168 4 126 358 262 496 8.36e-12 67.8
Msa1198530 AT3G04130.2 27.119 236 168 4 126 358 262 496 8.36e-12 67.8
Msa1198530 AT4G28010.1 22.832 346 223 5 122 466 106 408 8.46e-12 68.2
Msa1198530 AT1G19290.2 21.260 254 199 1 120 373 293 545 9.28e-12 68.2
Msa1198530 AT1G19290.1 21.260 254 199 1 120 373 293 545 9.28e-12 68.2
Msa1198530 AT5G01110.1 21.114 341 254 6 126 462 273 602 9.83e-12 67.8
Msa1198530 AT5G01110.1 20.992 262 206 1 129 390 241 501 1.87e-11 67.0
Msa1198530 AT2G19280.4 25.498 251 180 4 124 371 409 655 1.10e-11 67.8
Msa1198530 AT2G19280.2 25.498 251 180 4 124 371 409 655 1.10e-11 67.8
Msa1198530 AT2G19280.1 25.498 251 180 4 124 371 409 655 1.10e-11 67.8
Msa1198530 AT2G19280.3 25.498 251 180 4 124 371 409 655 1.10e-11 67.8
Msa1198530 AT5G01110.2 21.114 341 254 6 126 462 301 630 1.19e-11 67.8
Msa1198530 AT5G01110.2 20.992 262 206 1 129 390 269 529 2.05e-11 67.0
Msa1198530 AT1G63130.1 20.573 384 258 5 38 416 271 612 1.76e-11 67.0
Msa1198530 AT1G63130.2 20.573 384 258 5 38 416 271 612 1.76e-11 67.0
Msa1198530 AT4G30825.1 30.380 158 104 2 120 272 725 881 2.14e-11 67.0
Msa1198530 AT1G13040.2 22.593 270 199 3 135 399 21 285 2.14e-11 66.6
Msa1198530 AT1G13040.1 22.593 270 199 3 135 399 21 285 2.14e-11 66.6
Msa1198530 AT1G06710.7 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.7 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.1 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.1 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.9 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.9 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.4 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.4 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.13 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.13 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.3 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.3 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.8 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.8 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.2 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.2 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.19 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.19 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.5 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.5 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.6 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.6 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.12 21.111 360 255 6 130 472 424 771 2.38e-11 67.0
Msa1198530 AT1G06710.12 21.534 339 247 3 74 394 502 839 6.23e-11 65.5
Msa1198530 AT1G06710.15 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.15 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.18 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.18 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.17 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.17 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.14 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.14 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.16 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.16 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.10 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.10 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT1G06710.11 21.111 360 255 6 130 472 424 771 2.43e-11 67.0
Msa1198530 AT1G06710.11 21.534 339 247 3 74 394 502 839 8.48e-11 65.1
Msa1198530 AT2G15630.1 19.765 425 265 7 97 452 197 614 2.43e-11 66.6
Msa1198530 AT1G05670.1 19.471 416 318 8 36 441 150 558 2.82e-11 66.6
Msa1198530 AT1G05670.1 19.582 383 297 5 76 455 302 676 5.47e-11 65.5
Msa1198530 AT1G05670.2 19.471 416 318 8 36 441 150 558 2.82e-11 66.6
Msa1198530 AT1G05670.2 19.582 383 297 5 76 455 302 676 5.47e-11 65.5
Msa1198530 AT1G05670.3 19.471 416 318 8 36 441 150 558 2.82e-11 66.6
Msa1198530 AT1G05670.3 19.582 383 297 5 76 455 302 676 5.47e-11 65.5
Msa1198530 AT5G25630.3 21.724 290 213 4 122 402 63 347 2.89e-11 66.2
Msa1198530 AT5G28370.1 28.571 154 108 2 126 278 514 666 2.95e-11 66.2
Msa1198530 AT4G31850.1 20.888 383 267 5 122 472 187 565 3.08e-11 66.6
Msa1198530 AT1G06580.1 20.096 418 321 4 49 464 42 448 3.14e-11 65.9
Msa1198530 AT5G25630.1 22.028 286 209 4 126 402 118 398 3.18e-11 66.2
Msa1198530 AT1G63080.2 21.725 313 207 3 74 384 294 570 3.31e-11 66.2
Msa1198530 AT1G63080.1 21.725 313 207 3 74 384 294 570 3.31e-11 66.2
Msa1198530 AT1G63080.3 21.725 313 207 3 74 384 294 570 3.31e-11 66.2
Msa1198530 AT3G61520.1 28.571 154 108 2 126 278 514 666 3.73e-11 66.2
Msa1198530 AT5G28460.1 28.571 154 108 2 126 278 514 666 3.93e-11 66.2
Msa1198530 AT3G18110.1 23.323 313 201 6 126 400 228 539 3.94e-11 66.2
Msa1198530 AT5G27270.5 21.888 233 180 2 122 354 292 522 3.98e-11 66.2
Msa1198530 AT5G27270.4 21.888 233 180 2 122 354 292 522 4.12e-11 66.2
Msa1198530 AT5G27270.1 21.888 233 180 2 122 354 292 522 4.20e-11 66.2
Msa1198530 AT1G10910.2 20.354 226 179 1 156 381 235 459 4.50e-11 65.9
Msa1198530 AT1G10910.1 20.354 226 179 1 156 381 235 459 5.25e-11 65.5
Msa1198530 AT5G27270.3 21.983 232 179 2 122 353 87 316 6.14e-11 65.5
Msa1198530 AT5G27270.2 21.983 232 179 2 122 353 87 316 6.14e-11 65.5
Msa1198530 AT1G52640.1 23.041 217 160 4 101 313 219 432 6.55e-11 65.1
Msa1198530 AT1G02420.1 22.754 167 128 1 124 290 247 412 7.24e-11 64.7
Msa1198530 AT5G39710.1 21.237 372 280 6 104 471 184 546 7.99e-11 65.1
Msa1198530 AT5G38730.1 24.513 359 222 8 62 377 103 455 8.64e-11 64.7
Msa1198530 AT4G39620.1 22.530 253 187 6 122 370 207 454 8.74e-11 64.7
Msa1198530 AT1G63150.2 20.286 350 250 7 126 464 121 452 9.27e-11 64.7
Msa1198530 AT1G63150.1 20.286 350 250 7 126 464 121 452 9.27e-11 64.7

Find 119 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGATGAAGTATTGGCTTAA+AGG 0.151752 8_1:-50162463 None:intergenic
GCTGCAGTTAATGATATTTC+TGG 0.193804 8_1:+50161365 Msa1198530:CDS
TCTGAATATGATTCAGGTTT+TGG 0.218361 8_1:+50161661 Msa1198530:CDS
GCAAAGTATACGAGGTTTAT+AGG 0.245815 8_1:+50161588 Msa1198530:CDS
TTTGCTTCTCCGAGAAAATT+AGG 0.246831 8_1:+50158699 Msa1198530:five_prime_UTR
ATTACATTGTATGGGAAAAT+AGG 0.247775 8_1:+50161566 Msa1198530:CDS
ATATAGCCTCAAGCAACTTC+TGG 0.280772 8_1:-50162195 None:intergenic
CAGTTTCTAATTACATTGTA+TGG 0.283082 8_1:+50161557 Msa1198530:CDS
GTGGGAAGCGCGTTTATAAA+TGG 0.289722 8_1:+50158926 Msa1198530:CDS
AAGCTATCTGAATATGATTC+AGG 0.291296 8_1:+50161655 Msa1198530:CDS
TGTCTACATCAACCATTATA+TGG 0.309928 8_1:+50162384 Msa1198530:three_prime_UTR
TTGTGGCATGTGCTTGTTGT+AGG 0.315373 8_1:+50162435 Msa1198530:three_prime_UTR
TTCATTTCTTGAATGATAGA+TGG 0.315931 8_1:-50161287 None:intergenic
CCAAGCTATACATATTGATT+TGG 0.317319 8_1:+50161031 Msa1198530:CDS
GAAGTGGCGCATGCCGTATA+TGG 0.327899 8_1:+50162309 Msa1198530:three_prime_UTR
CGAGTTGCAAATGTATTGAT+AGG 0.332634 8_1:+50161758 Msa1198530:CDS
CTTAATCAGTTTATTAAGAG+TGG 0.365489 8_1:+50158907 Msa1198530:CDS
AGGAGCGTGCTCGGAGGAGG+GGG 0.367351 8_1:+50161825 Msa1198530:CDS
ATTATATCAACCTGCTCTTA+AGG 0.369801 8_1:+50158987 Msa1198530:CDS
CTTATAGTGAAAACCATATA+CGG 0.378033 8_1:-50162322 None:intergenic
TCAAAAGTGTTCACCGTTGT+AGG 0.378935 8_1:-50158738 None:intergenic
ATTCTTTCACATATAATGTA+TGG 0.380119 8_1:+50161330 Msa1198530:CDS
CATACAATGTAATTAGAAAC+TGG 0.399606 8_1:-50161556 None:intergenic
TTGATATCTGATGCAATTGT+TGG 0.402278 8_1:+50162512 Msa1198530:three_prime_UTR
GTCATTTCTAGATGAAGTAT+TGG 0.408412 8_1:-50162471 None:intergenic
TGCATGGATAAACCATATAA+TGG 0.418339 8_1:-50162396 None:intergenic
AGAAGGTGCACTTAAGGAAT+TGG 0.419645 8_1:+50161499 Msa1198530:CDS
ATAGGGTCTGGCGTTCCCTT+AGG 0.427793 8_1:+50161606 Msa1198530:CDS
GGTCTTTATCATATTCCTCT+TGG 0.433190 8_1:-50161000 None:intergenic
ATGACTCTTTATAGTAAAGT+AGG 0.433747 8_1:+50161248 Msa1198530:CDS
CAAAGTATACGAGGTTTATA+GGG 0.436615 8_1:+50161589 Msa1198530:CDS
AAGAGGGACGGTCGAGTCAC+TGG 0.436839 8_1:+50161413 Msa1198530:CDS
TAAAGTCTGCATTCCGCAAA+TGG 0.437007 8_1:-50161889 None:intergenic
ACATTATATGTGAAAGAATC+CGG 0.442518 8_1:-50161326 None:intergenic
GGTCAACTTGAAAGATCTCC+CGG 0.444569 8_1:+50161682 Msa1198530:CDS
CGCGTTTATAAATGGGAAGT+TGG 0.445756 8_1:+50158934 Msa1198530:CDS
TAAAGGAGCGTGCTCGGAGG+AGG 0.446366 8_1:+50161822 Msa1198530:CDS
CAGAAAAGTGTTTCCGTGAG+TGG 0.460026 8_1:+50161708 Msa1198530:CDS
TATAGCCTCAAGCAACTTCT+GGG 0.470403 8_1:-50162194 None:intergenic
AAAGGAGCGTGCTCGGAGGA+GGG 0.478966 8_1:+50161823 Msa1198530:CDS
CGGAGAAGCAAAAGCGGAAG+AGG 0.479652 8_1:-50158688 None:intergenic
AGAAATCTGTGGAATCTGTT+GGG 0.480158 8_1:+50162065 Msa1198530:CDS
TATACGAGGTTTATAGGGTC+TGG 0.480388 8_1:+50161594 Msa1198530:CDS
AAGAAATCTGTGGAATCTGT+TGG 0.481388 8_1:+50162064 Msa1198530:CDS
ATACCTATTGTCTCAGATGA+TGG 0.482076 8_1:-50161977 None:intergenic
GAAGGCAGAAGGTGCACTTA+AGG 0.485117 8_1:+50161493 Msa1198530:CDS
TGGGAAGCGCGTTTATAAAT+GGG 0.485728 8_1:+50158927 Msa1198530:CDS
GTTCCATCATCTGAGACAAT+AGG 0.486056 8_1:+50161974 Msa1198530:CDS
GATGTAGACATTCCTTCAAA+AGG 0.490366 8_1:-50162371 None:intergenic
TTATCCGAAGCAATCTCAAT+TGG 0.493361 8_1:+50161929 Msa1198530:CDS
TCTACCAATTGAGATTGCTT+CGG 0.494263 8_1:-50161933 None:intergenic
CCAAATCAATATGTATAGCT+TGG 0.496342 8_1:-50161031 None:intergenic
GACATTCCTTCAAAAGGAGA+TGG 0.497668 8_1:-50162365 None:intergenic
ATCTATCATTCAAGAAATGA+AGG 0.497880 8_1:+50161289 Msa1198530:CDS
GCGGAATGCAGACTTTAAGT+TGG 0.503435 8_1:+50161895 Msa1198530:CDS
AGTTTCTAATTACATTGTAT+GGG 0.504578 8_1:+50161558 Msa1198530:CDS
ACGGTCGAGTCACTGGAGAT+TGG 0.505652 8_1:+50161420 Msa1198530:CDS
ATTAGAACTTACGCCGCTGC+TGG 0.506567 8_1:+50162109 Msa1198530:CDS
GAGCAAGAGAAGGATGTTGA+TGG 0.508667 8_1:+50162016 Msa1198530:CDS
GAGTTGCAAATGTATTGATA+GGG 0.511075 8_1:+50161759 Msa1198530:CDS
TGATATTTCTGGTGTCGAAA+GGG 0.511359 8_1:+50161376 Msa1198530:CDS
ATCTCAATTGGTAGAGGGAA+TGG 0.512168 8_1:+50161941 Msa1198530:CDS
AAGGAGCGTGCTCGGAGGAG+GGG 0.512913 8_1:+50161824 Msa1198530:CDS
ACTTCTCAACTGCTACTGTA+AGG 0.521971 8_1:+50161139 Msa1198530:CDS
CGCTTAAGAAGCTGAGACAA+CGG 0.525030 8_1:+50158962 Msa1198530:CDS
ATGTCTCTGATGCAACGTTA+CGG 0.528194 8_1:+50158781 Msa1198530:CDS
ATATGCAAAATTAGAGATGC+TGG 0.528260 8_1:+50161784 Msa1198530:CDS
AAAAGAATCACGAGGTTGCA+TGG 0.530653 8_1:-50162412 None:intergenic
TGCAGACTTTAAGTTGGCGG+TGG 0.532018 8_1:+50161901 Msa1198530:CDS
ATGATATTTCTGGTGTCGAA+AGG 0.532268 8_1:+50161375 Msa1198530:CDS
GAGACATTGTTGCTCAGTGA+TGG 0.534809 8_1:-50158765 None:intergenic
TGTGGAATCTGTTGGGGAAG+AGG 0.535027 8_1:+50162072 Msa1198530:CDS
GGAGAAGGCTGAAGAACTAA+AGG 0.536610 8_1:+50161805 Msa1198530:CDS
AAGAACTAAAGGAGCGTGCT+CGG 0.537452 8_1:+50161816 Msa1198530:CDS
TAGAGGGAATGGTGAAAAGT+GGG 0.538860 8_1:+50161952 Msa1198530:CDS
GGGTTATTGATGAGATGAAG+AGG 0.539631 8_1:+50161396 Msa1198530:CDS
GGTCTGGCGTTCCCTTAGGT+TGG 0.541986 8_1:+50161610 Msa1198530:CDS
GTAGAGGGAATGGTGAAAAG+TGG 0.542141 8_1:+50161951 Msa1198530:CDS
CACTTTCTTCATTCCTACAA+CGG 0.548430 8_1:+50158725 Msa1198530:five_prime_UTR
TTAATCAGTTTATTAAGAGT+GGG 0.552756 8_1:+50158908 Msa1198530:CDS
CACTTAAGGAATTGGAAAAG+AGG 0.555566 8_1:+50161507 Msa1198530:CDS
GAATGCAGACTTTAAGTTGG+CGG 0.558777 8_1:+50161898 Msa1198530:CDS
GAAGCAATCTCAATTGGTAG+AGG 0.560595 8_1:+50161935 Msa1198530:CDS
TATGAAACGACGATTGAAGA+TGG 0.562202 8_1:+50162147 Msa1198530:CDS
GGTTATTGATGAGATGAAGA+GGG 0.563994 8_1:+50161397 Msa1198530:CDS
TTTAGGAAATGCCAACCTAA+GGG 0.568249 8_1:-50161621 None:intergenic
AAGGAATTGGAAAAGAGGAA+TGG 0.570113 8_1:+50161512 Msa1198530:CDS
GGAGCGTGCTCGGAGGAGGG+GGG 0.575173 8_1:+50161826 Msa1198530:CDS
TACTTGAAACTCTTCAAAGA+CGG 0.580431 8_1:+50158856 Msa1198530:CDS
AGAAAAGTGTTTCCGTGAGT+GGG 0.581496 8_1:+50161709 Msa1198530:CDS
AACTTGTTTGAGAAGGCAGA+AGG 0.582161 8_1:+50161482 Msa1198530:CDS
TTGATGACTGATAAAGCTGA+AGG 0.582579 8_1:+50161164 Msa1198530:CDS
CGAAATCTTGAAGAAATCTG+TGG 0.586042 8_1:+50162054 Msa1198530:CDS
AAAATTAGAGATGCTGGAGA+AGG 0.589408 8_1:+50161790 Msa1198530:CDS
ACATTCCTTCAAAAGGAGAT+GGG 0.591788 8_1:-50162364 None:intergenic
GATTTGGTTGCAAAAGCTAG+AGG 0.596922 8_1:+50161047 Msa1198530:CDS
AATTTACATGAATCACTCCT+CGG 0.599378 8_1:-50162218 None:intergenic
ATGTATAGCTTGGTCACTGA+CGG 0.607677 8_1:-50161021 None:intergenic
TGCAGCTTGATTCCCACTCA+CGG 0.609199 8_1:-50161721 None:intergenic
AGCACTTGTCCTACCAGCAG+CGG 0.610957 8_1:-50162122 None:intergenic
AGTTGCAAATGTATTGATAG+GGG 0.611891 8_1:+50161760 Msa1198530:CDS
CATCAACATAAATAGACGCA+AGG 0.616654 8_1:-50161457 None:intergenic
TTGAAACTCTTCAAAGACGG+TGG 0.620058 8_1:+50158859 Msa1198530:CDS
TGATGACTGATAAAGCTGAA+GGG 0.624592 8_1:+50161165 Msa1198530:CDS
AAGCAATCTCAATTGGTAGA+GGG 0.624857 8_1:+50161936 Msa1198530:CDS
GATGACTGATAAAGCTGAAG+GGG 0.628456 8_1:+50161166 Msa1198530:CDS
GAAGGCTAGCAATATCATGC+CGG 0.629396 8_1:+50161307 Msa1198530:CDS
GAAGCACTACGAGCAAGAGA+AGG 0.634627 8_1:+50162006 Msa1198530:CDS
TGATGCTAACTTGTTTGAGA+AGG 0.634964 8_1:+50161475 Msa1198530:CDS
TTATAAGACAGTGAACTCAA+AGG 0.644951 8_1:-50161218 None:intergenic
GTCAACTTGAAAGATCTCCC+GGG 0.644962 8_1:+50161683 Msa1198530:CDS
GTTGCAGCTATCAGAAACAA+TGG 0.654586 8_1:+50160977 Msa1198530:intron
TATCAGAAACAATGGCCAAG+AGG 0.670222 8_1:+50160985 Msa1198530:CDS
ATTGATGAGATGAAGAGGGA+CGG 0.670634 8_1:+50161401 Msa1198530:CDS
GAAATCTGTGGAATCTGTTG+GGG 0.676021 8_1:+50162066 Msa1198530:CDS
GTTGCTTGAGGCTATATCCG+AGG 0.682538 8_1:+50162201 Msa1198530:CDS
AGATGCCCAGAAGTTGCTTG+AGG 0.693369 8_1:+50162189 Msa1198530:CDS
AACTAAAGGAGCGTGCTCGG+AGG 0.698646 8_1:+50161819 Msa1198530:CDS
GAAAATAGGCAAAGTATACG+AGG 0.724011 8_1:+50161580 Msa1198530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAATAAGATTATATAT+TGG + chr8_1:50159074-50159093 Msa1198530:intron 10.0%
!! TTATTTATTTATGTTCTGTT+TGG + chr8_1:50159176-50159195 Msa1198530:intron 15.0%
!! TAGCTAACATTAAAATAATT+TGG - chr8_1:50159695-50159714 None:intergenic 15.0%
!!! AATTTGAGTTGATTTTTTTT+TGG - chr8_1:50159968-50159987 None:intergenic 15.0%
!! AATAAAATGATATATTAGCT+TGG + chr8_1:50160038-50160057 Msa1198530:intron 15.0%
!!! ATAAAATGATATATTAGCTT+GGG + chr8_1:50160039-50160058 Msa1198530:intron 15.0%
!! TGGTTCAATAATAAAAATAA+CGG - chr8_1:50160618-50160637 None:intergenic 15.0%
!!! AACTTTAAAAACTCATTATA+TGG - chr8_1:50160638-50160657 None:intergenic 15.0%
!! TACTTTATAAATTATGAATG+TGG + chr8_1:50160717-50160736 Msa1198530:intron 15.0%
!! TTAATCAGTTTATTAAGAGT+GGG + chr8_1:50158908-50158927 Msa1198530:CDS 20.0%
!!! AATAAGATTATATATTGGCT+TGG + chr8_1:50159079-50159098 Msa1198530:intron 20.0%
!! AAATTCTCCAAAATAGTTTA+TGG - chr8_1:50159338-50159357 None:intergenic 20.0%
!! AAATGCTTATGATATGAATT+TGG + chr8_1:50159521-50159540 Msa1198530:intron 20.0%
!! CATATACACTTAACATATAA+GGG + chr8_1:50159629-50159648 Msa1198530:intron 20.0%
!!! ACTAAGTTGAAAATAATTGA+TGG + chr8_1:50159752-50159771 Msa1198530:intron 20.0%
!! TGTTCAGTAATTTATATTCA+TGG + chr8_1:50160934-50160953 Msa1198530:intron 20.0%
!! ATTCTTTCACATATAATGTA+TGG + chr8_1:50161330-50161349 Msa1198530:CDS 20.0%
!! AGTTTCTAATTACATTGTAT+GGG + chr8_1:50161558-50161577 Msa1198530:CDS 20.0%
!!! AAAAACTTGGGAAATATTTT+TGG + chr8_1:50161862-50161881 Msa1198530:CDS 20.0%
!! TCTTTGTTGCAATAAAAATT+TGG + chr8_1:50162266-50162285 Msa1198530:three_prime_UTR 20.0%
!!! TCAATTTAAACATTTTGAAG+TGG + chr8_1:50162293-50162312 Msa1198530:three_prime_UTR 20.0%
!! AAAGTGAAACCTAATTTTCT+CGG - chr8_1:50158711-50158730 None:intergenic 25.0%
! CTTAATCAGTTTATTAAGAG+TGG + chr8_1:50158907-50158926 Msa1198530:CDS 25.0%
!!! GTTATTACTAGTGTTTTTTC+TGG + chr8_1:50159123-50159142 Msa1198530:intron 25.0%
!!! GTTGTTTCCATAAACTATTT+TGG + chr8_1:50159328-50159347 Msa1198530:intron 25.0%
! GAGTTGTAGTTTATGAATTA+TGG + chr8_1:50159485-50159504 Msa1198530:intron 25.0%
! GCTATATCTATATGTTTCTT+AGG + chr8_1:50159569-50159588 Msa1198530:intron 25.0%
! GCATATACACTTAACATATA+AGG + chr8_1:50159628-50159647 Msa1198530:intron 25.0%
! AAACATTTATGAGCATGTTT+GGG - chr8_1:50159807-50159826 None:intergenic 25.0%
! TAAACATTTATGAGCATGTT+TGG - chr8_1:50159808-50159827 None:intergenic 25.0%
!! AACTCAAATTTGTGTTTTCT+AGG + chr8_1:50159978-50159997 Msa1198530:intron 25.0%
!!! GAATGGAGTTATTTTTATCA+TGG + chr8_1:50160067-50160086 Msa1198530:intron 25.0%
! TATCATGGAATCATAAAATG+AGG + chr8_1:50160082-50160101 Msa1198530:intron 25.0%
!!! AGACTTTTGGTTATTTTTCT+TGG + chr8_1:50160408-50160427 Msa1198530:intron 25.0%
!!! GACTTTTGGTTATTTTTCTT+GGG + chr8_1:50160409-50160428 Msa1198530:intron 25.0%
!!! ACTTTTGGTTATTTTTCTTG+GGG + chr8_1:50160410-50160429 Msa1198530:intron 25.0%
! ATGACTCTTTATAGTAAAGT+AGG + chr8_1:50161248-50161267 Msa1198530:CDS 25.0%
! TTCATTTCTTGAATGATAGA+TGG - chr8_1:50161290-50161309 None:intergenic 25.0%
! ATCTATCATTCAAGAAATGA+AGG + chr8_1:50161289-50161308 Msa1198530:CDS 25.0%
! ACATTATATGTGAAAGAATC+CGG - chr8_1:50161329-50161348 None:intergenic 25.0%
! CATACAATGTAATTAGAAAC+TGG - chr8_1:50161559-50161578 None:intergenic 25.0%
! CAGTTTCTAATTACATTGTA+TGG + chr8_1:50161557-50161576 Msa1198530:CDS 25.0%
! ATTACATTGTATGGGAAAAT+AGG + chr8_1:50161566-50161585 Msa1198530:CDS 25.0%
!!! TATTTTTGGATTACCATTTG+CGG + chr8_1:50161876-50161895 Msa1198530:CDS 25.0%
! CTTATAGTGAAAACCATATA+CGG - chr8_1:50162325-50162344 None:intergenic 25.0%
!! TATATGGTTTTCACTATAAG+AGG + chr8_1:50162325-50162344 Msa1198530:three_prime_UTR 25.0%
TACTTGAAACTCTTCAAAGA+CGG + chr8_1:50158856-50158875 Msa1198530:CDS 30.0%
ATTATATCAACCTGCTCTTA+AGG + chr8_1:50158987-50159006 Msa1198530:CDS 30.0%
TGTAAAAATACCTTAAGAGC+AGG - chr8_1:50159000-50159019 None:intergenic 30.0%
!!! TACATTTAAGCGCTTTTTCT+AGG + chr8_1:50159016-50159035 Msa1198530:intron 30.0%
!!! TTTTTTCTGGATGTGAAACT+GGG + chr8_1:50159136-50159155 Msa1198530:intron 30.0%
TATGTTCTGTTTGGATAAAC+AGG + chr8_1:50159185-50159204 Msa1198530:intron 30.0%
TCAAATTAGCCAATCTAGAA+GGG + chr8_1:50159454-50159473 Msa1198530:intron 30.0%
CATAAACTACAACTCACTAA+GGG - chr8_1:50159480-50159499 None:intergenic 30.0%
TCATAAACTACAACTCACTA+AGG - chr8_1:50159481-50159500 None:intergenic 30.0%
!! TAGCTATAAGCTGTTTTCAT+AGG + chr8_1:50159709-50159728 Msa1198530:intron 30.0%
!! TGATATATTAGCTTGGGTTT+TGG + chr8_1:50160045-50160064 Msa1198530:intron 30.0%
! GTTTTTCTGCATAATTTAGC+AGG + chr8_1:50160155-50160174 Msa1198530:intron 30.0%
TCTGCTTGGTTATTAATATC+AGG + chr8_1:50160229-50160248 Msa1198530:intron 30.0%
CTATCAAACTTCCTTAAAAC+AGG - chr8_1:50160335-50160354 None:intergenic 30.0%
TGTGATGGTAAACTTATGAT+AGG + chr8_1:50160770-50160789 Msa1198530:intron 30.0%
CCAAATCAATATGTATAGCT+TGG - chr8_1:50161034-50161053 None:intergenic 30.0%
! CCAAGCTATACATATTGATT+TGG + chr8_1:50161031-50161050 Msa1198530:CDS 30.0%
TTATAAGACAGTGAACTCAA+AGG - chr8_1:50161221-50161240 None:intergenic 30.0%
! ATGATAGATGGAATCTTTTC+TGG - chr8_1:50161278-50161297 None:intergenic 30.0%
CAAAGTATACGAGGTTTATA+GGG + chr8_1:50161589-50161608 Msa1198530:CDS 30.0%
! TAGCTTATGTTTGCAGTTTT+AGG - chr8_1:50161641-50161660 None:intergenic 30.0%
AAGCTATCTGAATATGATTC+AGG + chr8_1:50161655-50161674 Msa1198530:CDS 30.0%
!! TCTGAATATGATTCAGGTTT+TGG + chr8_1:50161661-50161680 Msa1198530:CDS 30.0%
! GAGTTGCAAATGTATTGATA+GGG + chr8_1:50161759-50161778 Msa1198530:CDS 30.0%
! AGTTGCAAATGTATTGATAG+GGG + chr8_1:50161760-50161779 Msa1198530:CDS 30.0%
ATATGCAAAATTAGAGATGC+TGG + chr8_1:50161784-50161803 Msa1198530:CDS 30.0%
! ATTTCCCAAGTTTTTGCATT+AGG - chr8_1:50161857-50161876 None:intergenic 30.0%
AATTTACATGAATCACTCCT+CGG - chr8_1:50162221-50162240 None:intergenic 30.0%
TGTCTACATCAACCATTATA+TGG + chr8_1:50162384-50162403 Msa1198530:three_prime_UTR 30.0%
TGCATGGATAAACCATATAA+TGG - chr8_1:50162399-50162418 None:intergenic 30.0%
!! TAGATGAAGTATTGGCTTAA+AGG - chr8_1:50162466-50162485 None:intergenic 30.0%
! GTCATTTCTAGATGAAGTAT+TGG - chr8_1:50162474-50162493 None:intergenic 30.0%
TTGATATCTGATGCAATTGT+TGG + chr8_1:50162512-50162531 Msa1198530:three_prime_UTR 30.0%
TTTGCTTCTCCGAGAAAATT+AGG + chr8_1:50158699-50158718 Msa1198530:five_prime_UTR 35.0%
CACTTTCTTCATTCCTACAA+CGG + chr8_1:50158725-50158744 Msa1198530:five_prime_UTR 35.0%
!!! GTTTTTTCTGGATGTGAAAC+TGG + chr8_1:50159135-50159154 Msa1198530:intron 35.0%
CTCAAATTAGCCAATCTAGA+AGG + chr8_1:50159453-50159472 Msa1198530:intron 35.0%
!!! TATTAGCTTGGGTTTTGGAA+TGG + chr8_1:50160050-50160069 Msa1198530:intron 35.0%
TGTTAGTGTCAACCTTTGTT+AGG + chr8_1:50160113-50160132 Msa1198530:intron 35.0%
GCTTGGTTATTAATATCAGG+TGG + chr8_1:50160232-50160251 Msa1198530:intron 35.0%
!!! GTTTTGGTTCCTTTTGCAAT+TGG + chr8_1:50160260-50160279 Msa1198530:intron 35.0%
AGCACAAAACCAATTGCAAA+AGG - chr8_1:50160272-50160291 None:intergenic 35.0%
! GCTTTTAGTGTGGTTATAAG+TGG + chr8_1:50160302-50160321 Msa1198530:intron 35.0%
AAACCACATAAGGCCAAAAA+TGG - chr8_1:50160376-50160395 None:intergenic 35.0%
!!! TCTGATTTGGCTTAGACTTT+TGG + chr8_1:50160395-50160414 Msa1198530:intron 35.0%
AAATGACTCACCCAAATACA+AGG - chr8_1:50160525-50160544 None:intergenic 35.0%
TCAAATGCAGTGGCTTATAA+AGG + chr8_1:50160745-50160764 Msa1198530:intron 35.0%
GGTCTTTATCATATTCCTCT+TGG - chr8_1:50161003-50161022 None:intergenic 35.0%
! TTGATGACTGATAAAGCTGA+AGG + chr8_1:50161164-50161183 Msa1198530:CDS 35.0%
TGATGACTGATAAAGCTGAA+GGG + chr8_1:50161165-50161184 Msa1198530:CDS 35.0%
GCTGCAGTTAATGATATTTC+TGG + chr8_1:50161365-50161384 Msa1198530:CDS 35.0%
!! ATGATATTTCTGGTGTCGAA+AGG + chr8_1:50161375-50161394 Msa1198530:CDS 35.0%
!! TGATATTTCTGGTGTCGAAA+GGG + chr8_1:50161376-50161395 Msa1198530:CDS 35.0%
GGTTATTGATGAGATGAAGA+GGG + chr8_1:50161397-50161416 Msa1198530:CDS 35.0%
CATCAACATAAATAGACGCA+AGG - chr8_1:50161460-50161479 None:intergenic 35.0%
!! TGATGCTAACTTGTTTGAGA+AGG + chr8_1:50161475-50161494 Msa1198530:CDS 35.0%
CACTTAAGGAATTGGAAAAG+AGG + chr8_1:50161507-50161526 Msa1198530:CDS 35.0%
AAGGAATTGGAAAAGAGGAA+TGG + chr8_1:50161512-50161531 Msa1198530:CDS 35.0%
GAAAATAGGCAAAGTATACG+AGG + chr8_1:50161580-50161599 Msa1198530:CDS 35.0%
GCAAAGTATACGAGGTTTAT+AGG + chr8_1:50161588-50161607 Msa1198530:CDS 35.0%
TTTAGGAAATGCCAACCTAA+GGG - chr8_1:50161624-50161643 None:intergenic 35.0%
!! TTTTAGGAAATGCCAACCTA+AGG - chr8_1:50161625-50161644 None:intergenic 35.0%
! CGAGTTGCAAATGTATTGAT+AGG + chr8_1:50161758-50161777 Msa1198530:CDS 35.0%
AAAATTAGAGATGCTGGAGA+AGG + chr8_1:50161790-50161809 Msa1198530:CDS 35.0%
CAAGCCTAATGCAAAAACTT+GGG + chr8_1:50161850-50161869 Msa1198530:CDS 35.0%
TTATCCGAAGCAATCTCAAT+TGG + chr8_1:50161929-50161948 Msa1198530:CDS 35.0%
TCTACCAATTGAGATTGCTT+CGG - chr8_1:50161936-50161955 None:intergenic 35.0%
AAGCAATCTCAATTGGTAGA+GGG + chr8_1:50161936-50161955 Msa1198530:CDS 35.0%
ATACCTATTGTCTCAGATGA+TGG - chr8_1:50161980-50161999 None:intergenic 35.0%
CGAAATCTTGAAGAAATCTG+TGG + chr8_1:50162054-50162073 Msa1198530:CDS 35.0%
AAGAAATCTGTGGAATCTGT+TGG + chr8_1:50162064-50162083 Msa1198530:CDS 35.0%
AGAAATCTGTGGAATCTGTT+GGG + chr8_1:50162065-50162084 Msa1198530:CDS 35.0%
TATGAAACGACGATTGAAGA+TGG + chr8_1:50162147-50162166 Msa1198530:CDS 35.0%
! ATGGTTTTCACTATAAGAGG+TGG + chr8_1:50162328-50162347 Msa1198530:three_prime_UTR 35.0%
ACATTCCTTCAAAAGGAGAT+GGG - chr8_1:50162367-50162386 None:intergenic 35.0%
GATGTAGACATTCCTTCAAA+AGG - chr8_1:50162374-50162393 None:intergenic 35.0%
!!! AACCTCGTGATTCTTTTTTG+TGG + chr8_1:50162418-50162437 Msa1198530:three_prime_UTR 35.0%
! TTTTCTCGGAGAAGCAAAAG+CGG - chr8_1:50158697-50158716 None:intergenic 40.0%
!! TCAAAAGTGTTCACCGTTGT+AGG - chr8_1:50158741-50158760 None:intergenic 40.0%
ATGTCTCTGATGCAACGTTA+CGG + chr8_1:50158781-50158800 Msa1198530:CDS 40.0%
TTGAAACTCTTCAAAGACGG+TGG + chr8_1:50158859-50158878 Msa1198530:CDS 40.0%
! TGGGAAGCGCGTTTATAAAT+GGG + chr8_1:50158927-50158946 Msa1198530:CDS 40.0%
CGCGTTTATAAATGGGAAGT+TGG + chr8_1:50158934-50158953 Msa1198530:CDS 40.0%
TGGATGTGAAACTGGGTTAA+AGG + chr8_1:50159143-50159162 Msa1198530:intron 40.0%
GGATGTGAAACTGGGTTAAA+GGG + chr8_1:50159144-50159163 Msa1198530:intron 40.0%
AAGTCAATCGAAAACCCACT+TGG + chr8_1:50159842-50159861 Msa1198530:intron 40.0%
AGTCAATCGAAAACCCACTT+GGG + chr8_1:50159843-50159862 Msa1198530:intron 40.0%
!! GTCTCAAGTTCGTTTTTCTC+CGG + chr8_1:50159914-50159933 Msa1198530:intron 40.0%
!! TTTTTCTCCGGTGCCAATTT+CGG + chr8_1:50159926-50159945 Msa1198530:intron 40.0%
CCAAATTAGTGCACCGAAAT+TGG - chr8_1:50159942-50159961 None:intergenic 40.0%
! CCAATTTCGGTGCACTAATT+TGG + chr8_1:50159939-50159958 Msa1198530:intron 40.0%
TAGTGTCAACCTTTGTTAGG+CGG + chr8_1:50160116-50160135 Msa1198530:intron 40.0%
TGTGTGTGTGGAATAGCATT+TGG + chr8_1:50160205-50160224 Msa1198530:intron 40.0%
!! GAATAGCATTTGGTTCTGCT+TGG + chr8_1:50160215-50160234 Msa1198530:intron 40.0%
! ATATCAGGTGGCAGTTGTTT+TGG + chr8_1:50160244-50160263 Msa1198530:intron 40.0%
!!! CAATTGGTTTTGTGCTAGTG+TGG + chr8_1:50160276-50160295 Msa1198530:intron 40.0%
!! AGTGTGGATTGCTTTTAGTG+TGG + chr8_1:50160292-50160311 Msa1198530:intron 40.0%
! GTGGATTTGTGCCTGTTTTA+AGG + chr8_1:50160321-50160340 Msa1198530:intron 40.0%
! GTTTGATAGTTCCTTCTGTG+TGG + chr8_1:50160346-50160365 Msa1198530:intron 40.0%
AAAATGGACAACCACACAGA+AGG - chr8_1:50160360-50160379 None:intergenic 40.0%
! TCTGTGTGGTTGTCCATTTT+TGG + chr8_1:50160360-50160379 Msa1198530:intron 40.0%
!!! TGTCCATTTTTGGCCTTATG+TGG + chr8_1:50160370-50160389 Msa1198530:intron 40.0%
GCCTTATGTGGTTTCTGATT+TGG + chr8_1:50160382-50160401 Msa1198530:intron 40.0%
GCCAAATCAGAAACCACATA+AGG - chr8_1:50160386-50160405 None:intergenic 40.0%
!!! TGGTTATTTTTCTTGGGGTC+TGG + chr8_1:50160415-50160434 Msa1198530:intron 40.0%
!!! GTCTGGTAGTTTGGTTTTGT+GGG + chr8_1:50160432-50160451 Msa1198530:intron 40.0%
ACTCAAGTACGCCTTGTATT+TGG + chr8_1:50160511-50160530 Msa1198530:intron 40.0%
CTCAAGTACGCCTTGTATTT+GGG + chr8_1:50160512-50160531 Msa1198530:intron 40.0%
! TGGCTTATAAAGGAGTGTGA+TGG + chr8_1:50160755-50160774 Msa1198530:intron 40.0%
! TGATGTTGTTGACTAGTGTC+TGG + chr8_1:50160862-50160881 Msa1198530:intron 40.0%
! TCTCTAAATCTAGAGCTGCA+TGG - chr8_1:50160895-50160914 None:intergenic 40.0%
GTTGCAGCTATCAGAAACAA+TGG + chr8_1:50160977-50160996 Msa1198530:intron 40.0%
TATCAGAAACAATGGCCAAG+AGG + chr8_1:50160985-50161004 Msa1198530:CDS 40.0%
ATGTATAGCTTGGTCACTGA+CGG - chr8_1:50161024-50161043 None:intergenic 40.0%
! GATTTGGTTGCAAAAGCTAG+AGG + chr8_1:50161047-50161066 Msa1198530:CDS 40.0%
! GATGATTTTTCGCAGACTCA+GGG - chr8_1:50161106-50161125 None:intergenic 40.0%
! AGATGATTTTTCGCAGACTC+AGG - chr8_1:50161107-50161126 None:intergenic 40.0%
GCGAAAAATCATCTGTGCTA+TGG + chr8_1:50161113-50161132 Msa1198530:CDS 40.0%
ACTTCTCAACTGCTACTGTA+AGG + chr8_1:50161139-50161158 Msa1198530:CDS 40.0%
GATGACTGATAAAGCTGAAG+GGG + chr8_1:50161166-50161185 Msa1198530:CDS 40.0%
AGGGGTCGTTGAAAAAATGA+AGG + chr8_1:50161184-50161203 Msa1198530:CDS 40.0%
GGGTTATTGATGAGATGAAG+AGG + chr8_1:50161396-50161415 Msa1198530:CDS 40.0%
ATTGATGAGATGAAGAGGGA+CGG + chr8_1:50161401-50161420 Msa1198530:CDS 40.0%
! AACTTGTTTGAGAAGGCAGA+AGG + chr8_1:50161482-50161501 Msa1198530:CDS 40.0%
! AGAAGGTGCACTTAAGGAAT+TGG + chr8_1:50161499-50161518 Msa1198530:CDS 40.0%
TATACGAGGTTTATAGGGTC+TGG + chr8_1:50161594-50161613 Msa1198530:CDS 40.0%
!! AGAAAAGTGTTTCCGTGAGT+GGG + chr8_1:50161709-50161728 Msa1198530:CDS 40.0%
! CCAAGTTTTTGCATTAGGCT+TGG - chr8_1:50161852-50161871 None:intergenic 40.0%
CCAAGCCTAATGCAAAAACT+TGG + chr8_1:50161849-50161868 Msa1198530:CDS 40.0%
TAAAGTCTGCATTCCGCAAA+TGG - chr8_1:50161892-50161911 None:intergenic 40.0%
!! GAATGCAGACTTTAAGTTGG+CGG + chr8_1:50161898-50161917 Msa1198530:CDS 40.0%
GAAGCAATCTCAATTGGTAG+AGG + chr8_1:50161935-50161954 Msa1198530:CDS 40.0%
ATCTCAATTGGTAGAGGGAA+TGG + chr8_1:50161941-50161960 Msa1198530:CDS 40.0%
TAGAGGGAATGGTGAAAAGT+GGG + chr8_1:50161952-50161971 Msa1198530:CDS 40.0%
! GTTCCATCATCTGAGACAAT+AGG + chr8_1:50161974-50161993 Msa1198530:CDS 40.0%
GAAATCTGTGGAATCTGTTG+GGG + chr8_1:50162066-50162085 Msa1198530:CDS 40.0%
TATAGCCTCAAGCAACTTCT+GGG - chr8_1:50162197-50162216 None:intergenic 40.0%
ATATAGCCTCAAGCAACTTC+TGG - chr8_1:50162198-50162217 None:intergenic 40.0%
GACATTCCTTCAAAAGGAGA+TGG - chr8_1:50162368-50162387 None:intergenic 40.0%
AAAAGAATCACGAGGTTGCA+TGG - chr8_1:50162415-50162434 None:intergenic 40.0%
TGCCACAAAAAAGAATCACG+AGG - chr8_1:50162423-50162442 None:intergenic 40.0%
GAGACATTGTTGCTCAGTGA+TGG - chr8_1:50158768-50158787 None:intergenic 45.0%
! GTGGGAAGCGCGTTTATAAA+TGG + chr8_1:50158926-50158945 Msa1198530:CDS 45.0%
CGCTTAAGAAGCTGAGACAA+CGG + chr8_1:50158962-50158981 Msa1198530:CDS 45.0%
GTGAAACTGGGTTAAAGGGA+TGG + chr8_1:50159148-50159167 Msa1198530:intron 45.0%
AATCGAAAACCCACTTGGGT+TGG + chr8_1:50159847-50159866 Msa1198530:intron 45.0%
AACGAACTTGAGACCTTGAG+AGG - chr8_1:50159908-50159927 None:intergenic 45.0%
AGTGTCAACCTTTGTTAGGC+GGG + chr8_1:50160117-50160136 Msa1198530:intron 45.0%
TTTCTTGGGGTCTGGTAGTT+TGG + chr8_1:50160423-50160442 Msa1198530:intron 45.0%
!!! GGTCTGGTAGTTTGGTTTTG+TGG + chr8_1:50160431-50160450 Msa1198530:intron 45.0%
!!! TTTTTTCCCTGCTAGTGCAG+TGG + chr8_1:50160468-50160487 Msa1198530:intron 45.0%
TAAACTCCACTGCACTAGCA+GGG - chr8_1:50160477-50160496 None:intergenic 45.0%
ATAAACTCCACTGCACTAGC+AGG - chr8_1:50160478-50160497 None:intergenic 45.0%
TGTGGATGCTTCAAATGCAG+TGG + chr8_1:50160735-50160754 Msa1198530:intron 45.0%
GAAGGCTAGCAATATCATGC+CGG + chr8_1:50161307-50161326 Msa1198530:CDS 45.0%
GGTCAACTTGAAAGATCTCC+CGG + chr8_1:50161682-50161701 Msa1198530:CDS 45.0%
GTCAACTTGAAAGATCTCCC+GGG + chr8_1:50161683-50161702 Msa1198530:CDS 45.0%
!! CAGAAAAGTGTTTCCGTGAG+TGG + chr8_1:50161708-50161727 Msa1198530:CDS 45.0%
GGAGAAGGCTGAAGAACTAA+AGG + chr8_1:50161805-50161824 Msa1198530:CDS 45.0%
! AAGAACTAAAGGAGCGTGCT+CGG + chr8_1:50161816-50161835 Msa1198530:CDS 45.0%
GCGGAATGCAGACTTTAAGT+TGG + chr8_1:50161895-50161914 Msa1198530:CDS 45.0%
GTAGAGGGAATGGTGAAAAG+TGG + chr8_1:50161951-50161970 Msa1198530:CDS 45.0%
GAGCAAGAGAAGGATGTTGA+TGG + chr8_1:50162016-50162035 Msa1198530:CDS 45.0%
! AGTCACCCATCTCCTTTTGA+AGG + chr8_1:50162359-50162378 Msa1198530:three_prime_UTR 45.0%
!! TTGTGGCATGTGCTTGTTGT+AGG + chr8_1:50162435-50162454 Msa1198530:three_prime_UTR 45.0%
CACTAAGGGCCCTTCTAGAT+TGG - chr8_1:50159466-50159485 None:intergenic 50.0%
TAGTGCACCGAAATTGGCAC+CGG - chr8_1:50159936-50159955 None:intergenic 50.0%
GTGTCAACCTTTGTTAGGCG+GGG + chr8_1:50160118-50160137 Msa1198530:intron 50.0%
ACCTTTGTTAGGCGGGGTAA+AGG + chr8_1:50160124-50160143 Msa1198530:intron 50.0%
ACCTTTACCCCGCCTAACAA+AGG - chr8_1:50160128-50160147 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + chr8_1:50160193-50160212 Msa1198530:intron 50.0%
! GAAGGCAGAAGGTGCACTTA+AGG + chr8_1:50161493-50161512 Msa1198530:CDS 50.0%
! GGAAACACTTTTCTGCTCCC+GGG - chr8_1:50161703-50161722 None:intergenic 50.0%
! CGGAAACACTTTTCTGCTCC+CGG - chr8_1:50161704-50161723 None:intergenic 50.0%
TGCAGCTTGATTCCCACTCA+CGG - chr8_1:50161724-50161743 None:intergenic 50.0%
!! TGCAGACTTTAAGTTGGCGG+TGG + chr8_1:50161901-50161920 Msa1198530:CDS 50.0%
! GAAGCACTACGAGCAAGAGA+AGG + chr8_1:50162006-50162025 Msa1198530:CDS 50.0%
TGTGGAATCTGTTGGGGAAG+AGG + chr8_1:50162072-50162091 Msa1198530:CDS 50.0%
ATTAGAACTTACGCCGCTGC+TGG + chr8_1:50162109-50162128 Msa1198530:CDS 50.0%
AGATGCCCAGAAGTTGCTTG+AGG + chr8_1:50162189-50162208 Msa1198530:CDS 50.0%
GTTGCTTGAGGCTATATCCG+AGG + chr8_1:50162201-50162220 Msa1198530:CDS 50.0%
CGGAGAAGCAAAAGCGGAAG+AGG - chr8_1:50158691-50158710 None:intergenic 55.0%
!! AAAACCCACTTGGGTTGGCC+TGG + chr8_1:50159852-50159871 Msa1198530:intron 55.0%
! TGGTGTGGGCTTGGTACCTT+GGG + chr8_1:50159875-50159894 Msa1198530:intron 55.0%
ACGGTCGAGTCACTGGAGAT+TGG + chr8_1:50161420-50161439 Msa1198530:CDS 55.0%
ATAGGGTCTGGCGTTCCCTT+AGG + chr8_1:50161606-50161625 Msa1198530:CDS 55.0%
! AACTAAAGGAGCGTGCTCGG+AGG + chr8_1:50161819-50161838 Msa1198530:CDS 55.0%
AGCACTTGTCCTACCAGCAG+CGG - chr8_1:50162125-50162144 None:intergenic 55.0%
GAAGTGGCGCATGCCGTATA+TGG + chr8_1:50162309-50162328 Msa1198530:three_prime_UTR 55.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8_1:50159859-50159878 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+GGG + chr8_1:50159861-50159880 Msa1198530:intron 60.0%
! GTGGTGTGGGCTTGGTACCT+TGG + chr8_1:50159874-50159893 Msa1198530:intron 60.0%
! GGTGTGGGCTTGGTACCTTG+GGG + chr8_1:50159876-50159895 Msa1198530:intron 60.0%
! CTTGAGAGGAGCACACCCCA+AGG - chr8_1:50159894-50159913 None:intergenic 60.0%
CTTGGGGTGTGCTCCTCTCA+AGG + chr8_1:50159892-50159911 Msa1198530:intron 60.0%
AAGAGGGACGGTCGAGTCAC+TGG + chr8_1:50161413-50161432 Msa1198530:CDS 60.0%
GGTCTGGCGTTCCCTTAGGT+TGG + chr8_1:50161610-50161629 Msa1198530:CDS 60.0%
! TAAAGGAGCGTGCTCGGAGG+AGG + chr8_1:50161822-50161841 Msa1198530:CDS 60.0%
! AAAGGAGCGTGCTCGGAGGA+GGG + chr8_1:50161823-50161842 Msa1198530:CDS 60.0%
GAACTTACGCCGCTGCTGGT+AGG + chr8_1:50162113-50162132 Msa1198530:CDS 60.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8_1:50159855-50159874 Msa1198530:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr8_1:50159860-50159879 None:intergenic 65.0%
!! CTTGGGTTGGCCTGGTGGTG+TGG + chr8_1:50159860-50159879 Msa1198530:intron 65.0%
! TTGGCCTGGTGGTGTGGGCT+TGG + chr8_1:50159866-50159885 Msa1198530:intron 65.0%
GGTACCAAGCCCACACCACC+AGG - chr8_1:50159873-50159892 None:intergenic 65.0%
! AAGGAGCGTGCTCGGAGGAG+GGG + chr8_1:50161824-50161843 Msa1198530:CDS 65.0%
! AGGAGCGTGCTCGGAGGAGG+GGG + chr8_1:50161825-50161844 Msa1198530:CDS 70.0%
GGAGCGTGCTCGGAGGAGGG+GGG + chr8_1:50161826-50161845 Msa1198530:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 50158687 50162544 50158687 ID=Msa1198530;Name=Msa1198530
chr8_1 mRNA 50158687 50162544 50158687 ID=Msa1198530-mRNA-1;Parent=Msa1198530;Name=Msa1198530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=94|1|1|1|1|1|2|316|490
chr8_1 exon 50158687 50159008 50158687 ID=Msa1198530-mRNA-1:exon:15721;Parent=Msa1198530-mRNA-1
chr8_1 exon 50160984 50162544 50160984 ID=Msa1198530-mRNA-1:exon:15722;Parent=Msa1198530-mRNA-1
chr8_1 five_prime_UTR 50158687 50158780 50158687 ID=Msa1198530-mRNA-1:five_prime_utr;Parent=Msa1198530-mRNA-1
chr8_1 CDS 50158781 50159008 50158781 ID=Msa1198530-mRNA-1:cds;Parent=Msa1198530-mRNA-1
chr8_1 CDS 50160984 50162228 50160984 ID=Msa1198530-mRNA-1:cds;Parent=Msa1198530-mRNA-1
chr8_1 three_prime_UTR 50162229 50162544 50162229 ID=Msa1198530-mRNA-1:three_prime_utr;Parent=Msa1198530-mRNA-1
Gene Sequence

>Msa1198530

ATGTCTCTGATGCAACGTTACGGAAAATGCAAAAGCGTTGTGAAACGATCAAAAAAGTACTTAGACGAAGCGCTTTACTTGAAACTCTTCAAAGACGGTGGTTCTGAACTCAATGTTCGTCAACAGCTTAATCAGTTTATTAAGAGTGGGAAGCGCGTTTATAAATGGGAAGTTGGCGATACGCTTAAGAAGCTGAGACAACGGAAATTATATCAACCTGCTCTTAAGCTATCAGAAACAATGGCCAAGAGGAATATGATAAAGACCGTCAGTGACCAAGCTATACATATTGATTTGGTTGCAAAAGCTAGAGGTATTGTTGCTGCTGAAAAATATTTTGTTGATCTCCCTGAGTCTGCGAAAAATCATCTGTGCTATGGTGCACTTCTCAACTGCTACTGTAAGGAGTTGATGACTGATAAAGCTGAAGGGGTCGTTGAAAAAATGAAGGATCTTGATTTTCCTTTGAGTTCACTGTCTTATAACAGTCTTATGACTCTTTATAGTAAAGTAGGTCAACCAGAAAAGATTCCATCTATCATTCAAGAAATGAAGGCTAGCAATATCATGCCGGATTCTTTCACATATAATGTATGGATGAGAGCTCTTGCTGCAGTTAATGATATTTCTGGTGTCGAAAGGGTTATTGATGAGATGAAGAGGGACGGTCGAGTCACTGGAGATTGGACAACGTATAGCAACCTTGCGTCTATTTATGTTGATGCTAACTTGTTTGAGAAGGCAGAAGGTGCACTTAAGGAATTGGAAAAGAGGAATGGTTACAAAGATCTTTCTGCTTACCAGTTTCTAATTACATTGTATGGGAAAATAGGCAAAGTATACGAGGTTTATAGGGTCTGGCGTTCCCTTAGGTTGGCATTTCCTAAAACTGCAAACATAAGCTATCTGAATATGATTCAGGTTTTGGTCAACTTGAAAGATCTCCCGGGAGCAGAAAAGTGTTTCCGTGAGTGGGAATCAAGCTGCACTACTTATGATATTCGAGTTGCAAATGTATTGATAGGGGCATATGCAAAATTAGAGATGCTGGAGAAGGCTGAAGAACTAAAGGAGCGTGCTCGGAGGAGGGGGGCCAAGCCTAATGCAAAAACTTGGGAAATATTTTTGGATTACCATTTGCGGAATGCAGACTTTAAGTTGGCGGTGGATTGTTTATCCGAAGCAATCTCAATTGGTAGAGGGAATGGTGAAAAGTGGGTTCCATCATCTGAGACAATAGGTATTATGATGAAGCACTACGAGCAAGAGAAGGATGTTGATGGTGCAGAAGAATTCATCGAAATCTTGAAGAAATCTGTGGAATCTGTTGGGGAAGAGGTGTTTGAATCATTGATTAGAACTTACGCCGCTGCTGGTAGGACAAGTGCTGCTATGAAACGACGATTGAAGATGGAAAATGTGAACGTGAATGAAGATGCCCAGAAGTTGCTTGAGGCTATATCCGAGGAGTGA

Protein sequence

>Msa1198530

MSLMQRYGKCKSVVKRSKKYLDEALYLKLFKDGGSELNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYQPALKLSETMAKRNMIKTVSDQAIHIDLVAKARGIVAAEKYFVDLPESAKNHLCYGALLNCYCKELMTDKAEGVVEKMKDLDFPLSSLSYNSLMTLYSKVGQPEKIPSIIQEMKASNIMPDSFTYNVWMRALAAVNDISGVERVIDEMKRDGRVTGDWTTYSNLASIYVDANLFEKAEGALKELEKRNGYKDLSAYQFLITLYGKIGKVYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWESSCTTYDIRVANVLIGAYAKLEMLEKAEELKERARRRGAKPNAKTWEIFLDYHLRNADFKLAVDCLSEAISIGRGNGEKWVPSSETIGIMMKHYEQEKDVDGAEEFIEILKKSVESVGEEVFESLIRTYAAAGRTSAAMKRRLKMENVNVNEDAQKLLEAISEE*