AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0062120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062120 MtrunA17_Chr1g0162381 97.244 508 14 0 1 508 1 508 0.0 1000
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062120 AT2G15860.1 62.971 478 153 9 36 508 54 512 0.0 546
Msa0062120 AT2G15860.2 61.429 490 153 10 36 508 54 524 0.0 537
Msa0062120 AT2G15860.3 62.264 424 125 9 36 443 54 458 1.02e-159 462
Msa0062120 AT2G15860.4 62.440 418 122 9 36 437 54 452 1.95e-158 458

Find 113 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCCGGTGGCGGCGGAAAT+TGG 0.125991 1_2:-21237626 Msa0062120:CDS
CTCAGCAGTAACACCTTTAA+TGG 0.213532 1_2:+21230565 None:intergenic
GTGATACCACTAAACTATTC+TGG 0.219513 1_2:-21230337 Msa0062120:three_prime_UTR
TGAGAAAATCAAGGGATAAA+AGG 0.232931 1_2:+21230221 None:intergenic
AAAATCTGCTCTAGATAAAT+TGG 0.241893 1_2:-21236609 Msa0062120:CDS
ATATCTGATTATATGATAAA+TGG 0.255524 1_2:+21230196 None:intergenic
ATCTTGGACTGATGTCTTCT+TGG 0.263781 1_2:+21230526 None:intergenic
TCTGGAGCATGGAGTGCTTT+AGG 0.298656 1_2:-21235971 Msa0062120:CDS
CGCCGGTGGCGGCGGAAATT+GGG 0.298686 1_2:-21237625 Msa0062120:CDS
GCCTATCAAGCAGCCATTAA+AGG 0.303168 1_2:-21230578 Msa0062120:CDS
CGGCGGAAATTGGGGCGGTT+GGG 0.307208 1_2:-21237616 Msa0062120:CDS
ACCTTTAATGGCTGCTTGAT+AGG 0.312993 1_2:+21230577 None:intergenic
TAATGCACCTTCCCTATTAG+AGG 0.313353 1_2:-21235093 Msa0062120:intron
GCGGCGGAAATTGGGGCGGT+TGG 0.339601 1_2:-21237617 Msa0062120:CDS
CTAAATATCCAATCATTGTC+TGG 0.353735 1_2:+21231846 None:intergenic
GGCGGAAATTGGGGCGGTTG+GGG 0.358974 1_2:-21237615 Msa0062120:CDS
GACTTATTAATCAGTGAAAC+TGG 0.359424 1_2:-21234921 Msa0062120:CDS
GCATTAGAACCTGGAGTTCC+TGG 0.359883 1_2:+21235110 None:intergenic
AGAAAGCACTGGCTTTATCT+TGG 0.360530 1_2:+21230510 None:intergenic
TCTTGGACTGATGTCTTCTT+GGG 0.367064 1_2:+21230527 None:intergenic
ATAATTGATCTTCATCGCTT+TGG 0.367189 1_2:+21234862 None:intergenic
TGTTGTGAAAACATGGATAT+TGG 0.391103 1_2:+21237730 None:intergenic
GATATAATTCAGAGAACTAC+TGG 0.394582 1_2:-21232198 Msa0062120:CDS
GTTTCACAACTTCTAACGTT+TGG 0.397114 1_2:-21231986 Msa0062120:CDS
TCTACATGAATCAAATTAAC+AGG 0.400751 1_2:+21230245 None:intergenic
GTCTGAAATGTGCTGTTTCG+CGG 0.402688 1_2:-21232008 Msa0062120:CDS
ATAAATGCCCAGACAATGAT+TGG 0.403832 1_2:-21231854 Msa0062120:CDS
AAAGTTACCTCCAGCTGCTC+TGG 0.404860 1_2:+21234795 None:intergenic
AGTTTCACAAATGCCTTGGC+TGG 0.417316 1_2:-21232234 Msa0062120:CDS
AAGGCTGCTGAAATGGCTGC+TGG 0.417716 1_2:-21232688 Msa0062120:CDS
TTTGCCCCAGAATAGTTTAG+TGG 0.418741 1_2:+21230331 None:intergenic
TGTTGGCAAGGCTGCTGAAA+TGG 0.423476 1_2:-21232695 Msa0062120:CDS
TGATACCACTAAACTATTCT+GGG 0.428487 1_2:-21230336 Msa0062120:three_prime_UTR
GTCATCAACTTCTTCATCCT+CGG 0.436498 1_2:+21231934 None:intergenic
ATTGAAAAGGCTAGAAAAGA+AGG 0.439240 1_2:-21234891 Msa0062120:CDS
CACTTACTAGTGTCTGAACT+GGG 0.444009 1_2:-21230278 Msa0062120:three_prime_UTR
GTAATGTGTGTAGGGTTTGA+AGG 0.448752 1_2:-21236023 Msa0062120:intron
ACACTTACTAGTGTCTGAAC+TGG 0.450174 1_2:-21230279 Msa0062120:three_prime_UTR
GAGAAAATCAAGGGATAAAA+GGG 0.450254 1_2:+21230222 None:intergenic
TTTGTTGGCAAGAGAAATGA+TGG 0.452056 1_2:+21231958 None:intergenic
TTATGGAGGTCCAGAGCAGC+TGG 0.460533 1_2:-21234805 Msa0062120:CDS
GAGAATTCAGCTTCAAACCT+TGG 0.461518 1_2:-21235155 Msa0062120:CDS
GCCCCAATTTCCGCCGCCAC+CGG 0.469913 1_2:+21237623 None:intergenic
GCCGGTGGCGGCGGAAATTG+GGG 0.471097 1_2:-21237624 Msa0062120:CDS
AGTGGATGAAGAAGCTGAAA+AGG 0.473699 1_2:-21236666 Msa0062120:CDS
ACACAAGACGCCGGTGGCGG+CGG 0.486559 1_2:-21237633 Msa0062120:CDS
TTTCAGTTTCACAAATGCCT+TGG 0.493240 1_2:-21232238 Msa0062120:intron
TTCAGACACTAGTAAGTGTT+AGG 0.495203 1_2:+21230283 None:intergenic
CACAGCTATAAGTAAAATCC+AGG 0.500617 1_2:-21230462 Msa0062120:CDS
TGAAGAAGTTGATGACGATA+AGG 0.503369 1_2:-21231927 Msa0062120:CDS
TGAAGATTCACTACTTAGCC+AGG 0.511588 1_2:-21236576 Msa0062120:intron
ACAATAAAGAAAGGAAATGC+AGG 0.517761 1_2:-21232754 Msa0062120:CDS
GCAACACAAGACGCCGGTGG+CGG 0.526130 1_2:-21237636 Msa0062120:CDS
GCTATAAGTAAAATCCAGGA+TGG 0.526975 1_2:-21230458 Msa0062120:CDS
AATTTACATGATGCAAGTGT+TGG 0.529843 1_2:-21232712 Msa0062120:CDS
AGCAAAAGTCTGCATTTGAC+GGG 0.535286 1_2:-21232852 Msa0062120:CDS
GCAAATCGCTGCTGAAGACT+CGG 0.539802 1_2:-21236708 Msa0062120:CDS
TAAATATCCAATCATTGTCT+GGG 0.539887 1_2:+21231847 None:intergenic
CATGATGGACCAGGAACTCC+AGG 0.540249 1_2:-21235119 Msa0062120:CDS
TTAGACTCTCTTCATTCTGA+GGG 0.540731 1_2:-21232171 Msa0062120:CDS
AACTGGAATTGAGATTGAAA+AGG 0.545630 1_2:-21234904 Msa0062120:CDS
TACATTGCGAGAGATTTCTT+CGG 0.546247 1_2:+21237545 None:intergenic
GAATTATATCATTAGCAGCT+AGG 0.548106 1_2:+21232211 None:intergenic
GGAGGATCTGTACCGCATGA+TGG 0.549991 1_2:-21235134 Msa0062120:CDS
CTATAAGTAAAATCCAGGAT+GGG 0.550409 1_2:-21230457 Msa0062120:CDS
AATTCAGCTTCAAACCTTGG+AGG 0.553437 1_2:-21235152 Msa0062120:CDS
ATTAGACTCTCTTCATTCTG+AGG 0.553694 1_2:-21232172 Msa0062120:CDS
TTGAGTAATGAAATTGATGC+TGG 0.556947 1_2:-21232799 Msa0062120:CDS
AATGCAAGTGCTTGAATATG+TGG 0.559060 1_2:-21234958 Msa0062120:CDS
AGGCTGCTGAAATGGCTGCT+GGG 0.562196 1_2:-21232687 Msa0062120:intron
GAGCAAAAGTCTGCATTTGA+CGG 0.562921 1_2:-21232853 Msa0062120:CDS
AATGCTCTTTGATGCTGTCT+CGG 0.566295 1_2:+21236739 None:intergenic
GTCTTCTAAAGAGGATGTAG+TGG 0.567458 1_2:-21236684 Msa0062120:CDS
CAGCATTCATCGAGGTCGAA+AGG 0.569781 1_2:+21230411 None:intergenic
TAAATGGTTTGAGAAAATCA+AGG 0.570080 1_2:+21230212 None:intergenic
ATTTGACGGGAAGCTTAAAG+AGG 0.577894 1_2:-21232839 Msa0062120:CDS
GTCTTCTTGGGAACAACTGT+GGG 0.578589 1_2:+21230539 None:intergenic
TTCCGAACCTCTAATAGGGA+AGG 0.580394 1_2:+21235086 None:intergenic
AGTGCTTGAATATGTGGGTA+AGG 0.584715 1_2:-21234952 Msa0062120:CDS
AAATGGTTTGAGAAAATCAA+GGG 0.591824 1_2:+21230213 None:intergenic
GATTTCTTCGGCGGCAACAG+CGG 0.592070 1_2:+21237557 None:intergenic
AAGAAAGGAAATGCAGGAAG+CGG 0.592995 1_2:-21232748 Msa0062120:CDS
TCTGTACCGCATGATGGACC+AGG 0.594388 1_2:-21235128 Msa0062120:CDS
AGGGAAGGTGCATTAGAACC+TGG 0.595416 1_2:+21235101 None:intergenic
CCAACCTGTAGTAAAACTGT+TGG 0.597807 1_2:+21231814 None:intergenic
ATTAGCAGCTAGGCCAGCCA+AGG 0.601827 1_2:+21232221 None:intergenic
TGTCTTCTTGGGAACAACTG+TGG 0.605458 1_2:+21230538 None:intergenic
AGACTCGGAGTCTTCTAAAG+AGG 0.607550 1_2:-21236693 Msa0062120:CDS
TTAGGAAATGCATGGAGAGG+TGG 0.610161 1_2:-21235953 Msa0062120:CDS
CTGTGATTTGATCAGCTCGA+AGG 0.617243 1_2:+21230480 None:intergenic
TATAAGTAAAATCCAGGATG+GGG 0.618547 1_2:-21230456 Msa0062120:CDS
GGAGTTCCTGGTCCATCATG+CGG 0.627103 1_2:+21235122 None:intergenic
GCTGGTGCTGATTCTAACAA+AGG 0.630570 1_2:-21232781 Msa0062120:CDS
ACGATAAGGCTAACATAGAG+TGG 0.631053 1_2:-21231913 Msa0062120:CDS
ACATGATGCAAGTGTTGGCA+AGG 0.633721 1_2:-21232707 Msa0062120:CDS
ATGCAATTCTCAGGAACTGG+AGG 0.646518 1_2:-21232932 Msa0062120:intron
GATACCACTAAACTATTCTG+GGG 0.648773 1_2:-21230335 Msa0062120:three_prime_UTR
ATTGCGAGAGATTTCTTCGG+CGG 0.651385 1_2:+21237548 None:intergenic
TTCTCTTGCCAACAAAACCG+AGG 0.657069 1_2:-21231951 Msa0062120:CDS
GGTGGCGGCGGAAATTGGGG+CGG 0.657932 1_2:-21237621 Msa0062120:CDS
CATGCGGTACAGATCCTCCA+AGG 0.659167 1_2:+21235138 None:intergenic
AGGCATATCTGATGTAACTG+AGG 0.666646 1_2:-21230600 Msa0062120:CDS
ATGCAAGTGCTTGAATATGT+GGG 0.667279 1_2:-21234957 Msa0062120:CDS
AAGGTGTTCAGAGAAAGCAC+TGG 0.669001 1_2:+21230499 None:intergenic
GGAGTGCTTTAGGAAATGCA+TGG 0.670171 1_2:-21235961 Msa0062120:CDS
GCTTTAGGAAATGCATGGAG+AGG 0.672523 1_2:-21235956 Msa0062120:CDS
CAAGCAACACAAGACGCCGG+TGG 0.681220 1_2:-21237639 Msa0062120:CDS
ATATGTGGGTAAGGAGACGA+TGG 0.687721 1_2:-21234943 Msa0062120:CDS
TGGAGGTCCAGAGCAGCTGG+AGG 0.689393 1_2:-21234802 Msa0062120:intron
GACAGCATCAAAGAGCATTG+CGG 0.694476 1_2:-21236735 Msa0062120:CDS
ACTTACTAGTGTCTGAACTG+GGG 0.705217 1_2:-21230277 Msa0062120:three_prime_UTR
GAACAAGCAACACAAGACGC+CGG 0.707222 1_2:-21237642 Msa0062120:CDS
TGTTCAAGCAGCATTCATCG+AGG 0.747787 1_2:+21230403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATTAATTTTTTAAAA+AGG - chr1_2:21230705-21230724 Msa0062120:intron 0.0%
!!! ATTAATTAATTTTTTAAAAA+GGG - chr1_2:21230706-21230725 Msa0062120:intron 0.0%
!! AAAGAAACAAATAAATTATT+CGG + chr1_2:21232921-21232940 None:intergenic 10.0%
!!! AATAATTTATTTGTTTCTTT+AGG - chr1_2:21232921-21232940 Msa0062120:CDS 10.0%
!!! ATTAAAAAATGACATTTTTT+AGG + chr1_2:21233674-21233693 None:intergenic 10.0%
!! TTCAAAAACAAATATTAATT+TGG + chr1_2:21233849-21233868 None:intergenic 10.0%
!!! TTTATATTTTAATTAGAGTA+AGG - chr1_2:21234487-21234506 Msa0062120:intron 10.0%
!!! GAATATAAATGTAAATTTTT+TGG - chr1_2:21234864-21234883 Msa0062120:CDS 10.0%
!!! AATTTTTTAAAAAGGGAATT+AGG - chr1_2:21230713-21230732 Msa0062120:intron 15.0%
!!! ATTTTTTAAAAAGGGAATTA+GGG - chr1_2:21230714-21230733 Msa0062120:intron 15.0%
!!! TCATTTTTTTAATGATTTGA+TGG - chr1_2:21230928-21230947 Msa0062120:intron 15.0%
!! ATGTAAAAGTTATTATTTGT+AGG - chr1_2:21231022-21231041 Msa0062120:intron 15.0%
!! ATATACTAGTTAAAAGATAT+AGG + chr1_2:21232325-21232344 None:intergenic 15.0%
!!! TATATTGTGCAATTTTTTAA+AGG - chr1_2:21232340-21232359 Msa0062120:intron 15.0%
!!! ATATTGTGCAATTTTTTAAA+GGG - chr1_2:21232341-21232360 Msa0062120:intron 15.0%
!! TTACAAAGTTAATGATTAAT+TGG - chr1_2:21232443-21232462 Msa0062120:intron 15.0%
!! TACAAAGTTAATGATTAATT+GGG - chr1_2:21232444-21232463 Msa0062120:intron 15.0%
!! AAAGAAAAATTATGTATGAT+AGG + chr1_2:21232878-21232897 None:intergenic 15.0%
!!! CATACATAATTTTTCTTTTT+TGG - chr1_2:21232880-21232899 Msa0062120:CDS 15.0%
!! AAGAAACAAATAAATTATTC+GGG + chr1_2:21232920-21232939 None:intergenic 15.0%
!! TAAAAGACAAATAAAAACAA+GGG + chr1_2:21233589-21233608 None:intergenic 15.0%
!! TTAAAAGACAAATAAAAACA+AGG + chr1_2:21233590-21233609 None:intergenic 15.0%
!!! AAAAACAAATATTAATTTGG+TGG + chr1_2:21233846-21233865 None:intergenic 15.0%
!!! TTTGTTTTTGAAAAATAACA+AGG - chr1_2:21233857-21233876 Msa0062120:intron 15.0%
!!! ATTCTTTATTTATATTAGTG+TGG + chr1_2:21233936-21233955 None:intergenic 15.0%
!! ATAAAGAATTATATTGATAG+TGG - chr1_2:21233947-21233966 Msa0062120:intron 15.0%
!! TAAAATATAAAAACAAAGCA+TGG + chr1_2:21234478-21234497 None:intergenic 15.0%
!!! TATAAATGTAAATTTTTTGG+TGG - chr1_2:21234867-21234886 Msa0062120:CDS 15.0%
!!! AAAACATTGATAATTACATA+TGG + chr1_2:21235454-21235473 None:intergenic 15.0%
!! TTGAACATTAATTTAATAGT+TGG + chr1_2:21236454-21236473 None:intergenic 15.0%
!! ACTATTAAATTAATGTTCAA+CGG - chr1_2:21236454-21236473 Msa0062120:intron 15.0%
!!! CAATTTAATTACCTTTTTTT+TGG - chr1_2:21236763-21236782 Msa0062120:intron 15.0%
!!! TTGCTTATTTTTAATAGTTT+TGG - chr1_2:21236948-21236967 Msa0062120:intron 15.0%
!!! TTGTTTTTTATAAGCTATAA+GGG - chr1_2:21237080-21237099 Msa0062120:intron 15.0%
!! GCTTATAAAAAACAAAAAAA+GGG + chr1_2:21237276-21237295 None:intergenic 15.0%
!! AGCTTATAAAAAACAAAAAA+AGG + chr1_2:21237277-21237296 None:intergenic 15.0%
!!! TTTTATTTTGTAAATAGTCA+AGG - chr1_2:21237728-21237747 Msa0062120:five_prime_UTR 15.0%
!! ATATCTGATTATATGATAAA+TGG + chr1_2:21237909-21237928 None:intergenic 15.0%
!! ATCAAAATGAATGCATAAAA+CGG + chr1_2:21230603-21230622 None:intergenic 20.0%
!! GAGTAAGTTATTTATGATAA+AGG - chr1_2:21230807-21230826 Msa0062120:intron 20.0%
!!! TTTAAAATCACACACATAAT+TGG + chr1_2:21230888-21230907 None:intergenic 20.0%
!!! AATTATGTGTGTGATTTTAA+AGG - chr1_2:21230887-21230906 Msa0062120:intron 20.0%
!! GTATATGAATTAAATCCTAA+AGG - chr1_2:21230993-21231012 Msa0062120:intron 20.0%
!! AAAAGTAAATGAAAAAGTAG+AGG - chr1_2:21231215-21231234 Msa0062120:intron 20.0%
!!! ATTTAATTTTGGAAGGATTT+AGG - chr1_2:21231257-21231276 Msa0062120:intron 20.0%
!!! TATTTTCATCAAAAATACCA+AGG + chr1_2:21232298-21232317 None:intergenic 20.0%
!!! TATTGTGCAATTTTTTAAAG+GGG - chr1_2:21232342-21232361 Msa0062120:intron 20.0%
!! ACAGTATTAAAAATACTAGT+GGG + chr1_2:21232424-21232443 None:intergenic 20.0%
!! AACAGTATTAAAAATACTAG+TGG + chr1_2:21232425-21232444 None:intergenic 20.0%
!! AGAAAATATGCAATTAGAAA+CGG + chr1_2:21232542-21232561 None:intergenic 20.0%
!!! TACTTCTTTTATGAATCTTA+TGG + chr1_2:21232624-21232643 None:intergenic 20.0%
!!! CTATTTATTATTTTACAGAC+TGG - chr1_2:21233100-21233119 Msa0062120:intron 20.0%
!! ATAAAATAACAATGGAATAG+AGG - chr1_2:21234032-21234051 Msa0062120:intron 20.0%
!! TCTACCTACAAAAAATATAA+AGG - chr1_2:21234788-21234807 Msa0062120:intron 20.0%
!!! GATTCCTTTATATTTTTTGT+AGG + chr1_2:21234795-21234814 None:intergenic 20.0%
!!! TTTTATACTACTGATTTACT+AGG + chr1_2:21234817-21234836 None:intergenic 20.0%
!!! TTATGATGAATTTTATTGTG+TGG - chr1_2:21234838-21234857 Msa0062120:CDS 20.0%
!! ATAGAATAATAATCATGACA+TGG + chr1_2:21235053-21235072 None:intergenic 20.0%
!! TACTCAAATCAAAAATTTGT+TGG + chr1_2:21235290-21235309 None:intergenic 20.0%
!! AAAGGAAAAACAATAAAGAA+AGG - chr1_2:21235339-21235358 Msa0062120:intron 20.0%
!! AATGTAGAAAATTTGAATGT+TGG - chr1_2:21235589-21235608 Msa0062120:intron 20.0%
!! ATGTAGAAAATTTGAATGTT+GGG - chr1_2:21235590-21235609 Msa0062120:intron 20.0%
!! AGTAATTCATAATTATACTC+AGG + chr1_2:21236584-21236603 None:intergenic 20.0%
!!! TTCAAATCTAAAATATTCAC+CGG - chr1_2:21236724-21236743 Msa0062120:CDS 20.0%
!!! GTTGTTTTTTATAAGCTATA+AGG - chr1_2:21237079-21237098 Msa0062120:intron 20.0%
!!! TGTTTTTTATAAGCTATAAG+GGG - chr1_2:21237081-21237100 Msa0062120:intron 20.0%
!!! ACATTTTCAATACATTTATC+AGG - chr1_2:21237482-21237501 Msa0062120:intron 20.0%
! TCAAAACTCTCATTCAAAAA+TGG - chr1_2:21230396-21230415 Msa0062120:exon 25.0%
!! CTTTTACATAGTTTTCCTTT+AGG + chr1_2:21231011-21231030 None:intergenic 25.0%
! TGAATGAGTAATGGTATTAA+AGG - chr1_2:21231063-21231082 Msa0062120:intron 25.0%
! GAATGAGTAATGGTATTAAA+GGG - chr1_2:21231064-21231083 Msa0062120:intron 25.0%
! TTATGAAAAAATTCACGATC+TGG - chr1_2:21231087-21231106 Msa0062120:intron 25.0%
! TATGAAAAAATTCACGATCT+GGG - chr1_2:21231088-21231107 Msa0062120:intron 25.0%
!! TGCTATATTTTCCTAAGATT+TGG - chr1_2:21231167-21231186 Msa0062120:intron 25.0%
!!! TCTTGGAAGTGATTTAATTT+TGG - chr1_2:21231246-21231265 Msa0062120:intron 25.0%
!! ATAGGATGATATAGAGTTTT+TGG - chr1_2:21231296-21231315 Msa0062120:intron 25.0%
!!! AGTTTTTGGTTGTGAATTAA+TGG - chr1_2:21231310-21231329 Msa0062120:intron 25.0%
!! AAAATCTGCTCTAGATAAAT+TGG - chr1_2:21231493-21231512 Msa0062120:intron 25.0%
!! GATCAAACATCTAAAACAAA+AGG + chr1_2:21231570-21231589 None:intergenic 25.0%
!!! GCTTCTAGAATATGTTTTTA+TGG - chr1_2:21231772-21231791 Msa0062120:intron 25.0%
!! TCTTTAAGAAAGACAATTGA+TGG - chr1_2:21231828-21231847 Msa0062120:CDS 25.0%
!!! GGGAGATATTTTTGTATTTA+TGG - chr1_2:21231878-21231897 Msa0062120:CDS 25.0%
! ATGATTCATATCCAATGATA+AGG + chr1_2:21231946-21231965 None:intergenic 25.0%
! TTAGTGTATATTAACCTACA+CGG - chr1_2:21232225-21232244 Msa0062120:CDS 25.0%
!!! GGTTGATTTGATTTTACTAA+AGG + chr1_2:21232396-21232415 None:intergenic 25.0%
!! TTATCTTTTATTCGAAGTCA+TGG - chr1_2:21232788-21232807 Msa0062120:CDS 25.0%
!!! GATCGATGTTTTTACATTTA+TGG - chr1_2:21233280-21233299 Msa0062120:intron 25.0%
! TTATATCTAGCACAATTTGT+TGG - chr1_2:21233369-21233388 Msa0062120:intron 25.0%
!! TATATCTAGCACAATTTGTT+GGG - chr1_2:21233370-21233389 Msa0062120:intron 25.0%
!! TATTTTATGCTTGTAGACAT+TGG + chr1_2:21234020-21234039 None:intergenic 25.0%
! CTACAAGCATAAAATAACAA+TGG - chr1_2:21234024-21234043 Msa0062120:intron 25.0%
! TAACAGTAAATTGGTATGAA+AGG + chr1_2:21234166-21234185 None:intergenic 25.0%
! ATAACTGAATAGACAGTATA+GGG + chr1_2:21234196-21234215 None:intergenic 25.0%
! GTTAACTGTATTATACTAGT+TGG - chr1_2:21234522-21234541 Msa0062120:intron 25.0%
!!! ATATTTTTTGTAGGTAGAAG+TGG + chr1_2:21234786-21234805 None:intergenic 25.0%
!!! AAATGTAAATTTTTTGGTGG+TGG - chr1_2:21234870-21234889 Msa0062120:CDS 25.0%
!! AATTGAAACTACAAGGATTT+TGG + chr1_2:21235109-21235128 None:intergenic 25.0%
!! TTTTCTTCTGTTAAACAACA+AGG + chr1_2:21235214-21235233 None:intergenic 25.0%
!! TTATCACAATTTTTCTCCAA+GGG - chr1_2:21235535-21235554 Msa0062120:intron 25.0%
! ATAAGATGCATCACATAATT+GGG + chr1_2:21235837-21235856 None:intergenic 25.0%
! AATAAGATGCATCACATAAT+TGG + chr1_2:21235838-21235857 None:intergenic 25.0%
! TCATGTACGTGAAAATATTA+TGG - chr1_2:21235957-21235976 Msa0062120:CDS 25.0%
! TAAATATCCAATCATTGTCT+GGG + chr1_2:21236258-21236277 None:intergenic 25.0%
! TATTAAAAACATCTACACCA+TGG - chr1_2:21236348-21236367 Msa0062120:intron 25.0%
! ATTAAAAACATCTACACCAT+GGG - chr1_2:21236349-21236368 Msa0062120:intron 25.0%
! TATGGTTTGAGTAAAAAAAG+TGG + chr1_2:21236399-21236418 None:intergenic 25.0%
!! TCAAATCTAAAATATTCACC+GGG - chr1_2:21236725-21236744 Msa0062120:CDS 25.0%
! AACTTGCAATACCAAAAAAA+AGG + chr1_2:21236777-21236796 None:intergenic 25.0%
!! GCTAACATAGTTTGAATTTT+AGG - chr1_2:21237004-21237023 Msa0062120:intron 25.0%
!!! AGTCATTTTCATAAACTGTT+TGG - chr1_2:21237344-21237363 Msa0062120:intron 25.0%
! TCTACATGAATCAAATTAAC+AGG + chr1_2:21237860-21237879 None:intergenic 25.0%
! AAATGGTTTGAGAAAATCAA+GGG + chr1_2:21237892-21237911 None:intergenic 25.0%
! TAAATGGTTTGAGAAAATCA+AGG + chr1_2:21237893-21237912 None:intergenic 25.0%
TGTTGTGAAAACATGGATAT+TGG + chr1_2:21230375-21230394 None:intergenic 30.0%
!! TTTTGAGTGTTGTGAAAACA+TGG + chr1_2:21230382-21230401 None:intergenic 30.0%
! GCAGTGTAAAAAGTTTTACA+CGG - chr1_2:21230848-21230867 Msa0062120:intron 30.0%
!! ACACATAATTGGTAATGATG+TGG + chr1_2:21230877-21230896 None:intergenic 30.0%
!! TATGTGTGTGATTTTAAAGG+TGG - chr1_2:21230890-21230909 Msa0062120:intron 30.0%
CTTAGGAAAATATAGCATCA+AGG + chr1_2:21231164-21231183 None:intergenic 30.0%
ATTGAGATCTACCAAATCTT+AGG + chr1_2:21231181-21231200 None:intergenic 30.0%
!! GGAAGTGATTTAATTTTGGA+AGG - chr1_2:21231250-21231269 Msa0062120:intron 30.0%
! TTTGGAAGGATTTAGGTTAT+TGG - chr1_2:21231264-21231283 Msa0062120:intron 30.0%
! TTGGAAGGATTTAGGTTATT+GGG - chr1_2:21231265-21231284 Msa0062120:intron 30.0%
! AATGGTGATTTTCAAAATGC+AGG - chr1_2:21231328-21231347 Msa0062120:intron 30.0%
! AGCTTCTGTGTATATTTTGT+TGG - chr1_2:21231619-21231638 Msa0062120:intron 30.0%
! ATGTTGATATCTTTTCTGCT+AGG - chr1_2:21231723-21231742 Msa0062120:intron 30.0%
TGATTGTCTTGACTAATTGT+AGG - chr1_2:21231797-21231816 Msa0062120:intron 30.0%
! ATAAGGTACTATACTACTGT+AGG + chr1_2:21231929-21231948 None:intergenic 30.0%
GTAGTATAGTACCTTATCAT+TGG - chr1_2:21231932-21231951 Msa0062120:CDS 30.0%
CATTGGATATGAATCATGAT+AGG - chr1_2:21231949-21231968 Msa0062120:CDS 30.0%
!! ATGCATTTCTTGTTGTTATC+TGG - chr1_2:21232022-21232041 Msa0062120:intron 30.0%
TAGTGTATATTAACCTACAC+GGG - chr1_2:21232226-21232245 Msa0062120:CDS 30.0%
!! TTTTAAAGGGGAATGAAGTA+TGG - chr1_2:21232354-21232373 Msa0062120:intron 30.0%
!! TAAAAATACTAGTGGGTTAC+AGG + chr1_2:21232417-21232436 None:intergenic 30.0%
GATAGCATGTATAAAGGATA+AGG + chr1_2:21232498-21232517 None:intergenic 30.0%
TGCAATGATAGCATGTATAA+AGG + chr1_2:21232504-21232523 None:intergenic 30.0%
AGTCAATAAGATGATAAGCT+TGG + chr1_2:21232594-21232613 None:intergenic 30.0%
GACTTATTAATCAGTGAAAC+TGG - chr1_2:21233181-21233200 Msa0062120:intron 30.0%
AACTGGAATTGAGATTGAAA+AGG - chr1_2:21233198-21233217 Msa0062120:intron 30.0%
ATTGAAAAGGCTAGAAAAGA+AGG - chr1_2:21233211-21233230 Msa0062120:intron 30.0%
ATAATTGATCTTCATCGCTT+TGG + chr1_2:21233243-21233262 None:intergenic 30.0%
!! CGATGTTTTTACATTTATGG+AGG - chr1_2:21233283-21233302 Msa0062120:intron 30.0%
!! ATATCTAGCACAATTTGTTG+GGG - chr1_2:21233371-21233390 Msa0062120:intron 30.0%
!!! GCTGATTTGTCTAATTGTTT+TGG - chr1_2:21233480-21233499 Msa0062120:intron 30.0%
TATTTGGTTGAGTAGAAAGT+AGG - chr1_2:21233529-21233548 Msa0062120:intron 30.0%
!!! TGACATTTTTTAGGCAAAGA+GGG + chr1_2:21233665-21233684 None:intergenic 30.0%
!!! ATGACATTTTTTAGGCAAAG+AGG + chr1_2:21233666-21233685 None:intergenic 30.0%
!!! GTATGTTTTAGAGATATCTG+CGG + chr1_2:21233799-21233818 None:intergenic 30.0%
ACAAGGAATAAGTATCATGT+CGG - chr1_2:21233874-21233893 Msa0062120:intron 30.0%
TATTGATCAGCCTATTATTG+TGG + chr1_2:21233910-21233929 None:intergenic 30.0%
ACAATAATAGGCTGATCAAT+AGG - chr1_2:21233909-21233928 Msa0062120:intron 30.0%
CAATAATAGGCTGATCAATA+GGG - chr1_2:21233910-21233929 Msa0062120:intron 30.0%
!! AAGGAATTAGAAGTTGGTTT+TGG + chr1_2:21234147-21234166 None:intergenic 30.0%
GTATGAAAGGAATTAGAAGT+TGG + chr1_2:21234153-21234172 None:intergenic 30.0%
GATAACTGAATAGACAGTAT+AGG + chr1_2:21234197-21234216 None:intergenic 30.0%
ATAAAATTGAGCATGGTTCT+AGG + chr1_2:21234235-21234254 None:intergenic 30.0%
TTCTTTCACATGCAAAGAAA+TGG + chr1_2:21234343-21234362 None:intergenic 30.0%
GAAAACAAACTTCTCTTGTT+TGG + chr1_2:21234418-21234437 None:intergenic 30.0%
ATAATACAGTTAACCAACAC+TGG + chr1_2:21234516-21234535 None:intergenic 30.0%
ACAAATGCATACAATATGCA+AGG + chr1_2:21234915-21234934 None:intergenic 30.0%
TTGAGTAATGAAATTGATGC+TGG - chr1_2:21235303-21235322 Msa0062120:intron 30.0%
ACAATAAAGAAAGGAAATGC+AGG - chr1_2:21235348-21235367 Msa0062120:intron 30.0%
AATTTACATGATGCAAGTGT+TGG - chr1_2:21235390-21235409 Msa0062120:intron 30.0%
! GTTATCACAATTTTTCTCCA+AGG - chr1_2:21235534-21235553 Msa0062120:intron 30.0%
AGAAAATTTGAATGTTGGGT+TGG - chr1_2:21235594-21235613 Msa0062120:intron 30.0%
CAAAATGTGCTTACACTAAT+AGG - chr1_2:21235641-21235660 Msa0062120:intron 30.0%
!!! TTTTTTCCCACTTAACTTTG+TGG - chr1_2:21235734-21235753 Msa0062120:intron 30.0%
! CATAATAACTAGCTTCAGAT+AGG + chr1_2:21235767-21235786 None:intergenic 30.0%
TCTCAATCAATAAGGGTAAA+GGG + chr1_2:21235802-21235821 None:intergenic 30.0%
TTCTCAATCAATAAGGGTAA+AGG + chr1_2:21235803-21235822 None:intergenic 30.0%
GAATTATATCATTAGCAGCT+AGG + chr1_2:21235894-21235913 None:intergenic 30.0%
GATATAATTCAGAGAACTAC+TGG - chr1_2:21235904-21235923 Msa0062120:intron 30.0%
CTAAATATCCAATCATTGTC+TGG + chr1_2:21236259-21236278 None:intergenic 30.0%
AGTTGTTAGTGATTGTTCTA+TGG + chr1_2:21236417-21236436 None:intergenic 30.0%
TTGCAAGTTGTATGTTTACT+TGG - chr1_2:21236788-21236807 Msa0062120:intron 30.0%
AAGACTTGCAATACCTAAAA+AGG + chr1_2:21236830-21236849 None:intergenic 30.0%
AAGGTAACCAACACAAATTA+CGG + chr1_2:21236853-21236872 None:intergenic 30.0%
GACATTTACACAATTGTTTG+TGG - chr1_2:21237366-21237385 Msa0062120:intron 30.0%
CTATAAGTAAAATCCAGGAT+GGG - chr1_2:21237645-21237664 Msa0062120:CDS 30.0%
TATAAGTAAAATCCAGGATG+GGG - chr1_2:21237646-21237665 Msa0062120:CDS 30.0%
TGATACCACTAAACTATTCT+GGG - chr1_2:21237766-21237785 Msa0062120:five_prime_UTR 30.0%
GAGAAAATCAAGGGATAAAA+GGG + chr1_2:21237883-21237902 None:intergenic 30.0%
TGAGAAAATCAAGGGATAAA+AGG + chr1_2:21237884-21237903 None:intergenic 30.0%
!! TTTTTGAAGATCGGAGAGAA+TGG + chr1_2:21230521-21230540 None:intergenic 35.0%
TACATTGCGAGAGATTTCTT+CGG + chr1_2:21230560-21230579 None:intergenic 35.0%
! GTTACTCATTTAGCTCATAC+TGG - chr1_2:21230785-21230804 Msa0062120:intron 35.0%
TAGCATGTGTGAATGAGTAA+TGG - chr1_2:21231054-21231073 Msa0062120:intron 35.0%
!!! AGCATCAAGGTTTTAAGTTG+TGG + chr1_2:21231151-21231170 None:intergenic 35.0%
!! AAGTAGAGGCGTTAATTTCT+TGG - chr1_2:21231229-21231248 Msa0062120:intron 35.0%
GGTTATTGGGAATAGTTGAT+AGG - chr1_2:21231278-21231297 Msa0062120:intron 35.0%
!! TCTAGAGCAGATTTTCGTAA+TGG + chr1_2:21231488-21231507 None:intergenic 35.0%
! ATATCTTTTCTGCTAGGTGA+TGG - chr1_2:21231729-21231748 Msa0062120:intron 35.0%
ATGTCGCAGCATAATTGTAT+CGG - chr1_2:21231855-21231874 Msa0062120:CDS 35.0%
! ATGCATTTTTCCCACTATGT+GGG + chr1_2:21232008-21232027 None:intergenic 35.0%
! AATGCATTTTTCCCACTATG+TGG + chr1_2:21232009-21232028 None:intergenic 35.0%
TTCAAACCCTACACACATTA+CGG + chr1_2:21232080-21232099 None:intergenic 35.0%
! GAAGGTTTTCGATAATTCTG+TGG - chr1_2:21232097-21232116 Msa0062120:intron 35.0%
TGAGTCTTGCCTAATGTAAA+GGG + chr1_2:21232471-21232490 None:intergenic 35.0%
TTGAGTCTTGCCTAATGTAA+AGG + chr1_2:21232472-21232491 None:intergenic 35.0%
ATAGACGAATACAAATGCAG+AGG - chr1_2:21232660-21232679 Msa0062120:intron 35.0%
GAGTATCTGTTGATATGCAA+TGG - chr1_2:21232840-21232859 Msa0062120:CDS 35.0%
! AGTTTTCCGAACCTCTAATA+GGG + chr1_2:21233023-21233042 None:intergenic 35.0%
AAACTCCTGTCATTCTCAAT+AGG - chr1_2:21233038-21233057 Msa0062120:intron 35.0%
GAAATCCTATTGAGAATGAC+AGG + chr1_2:21233046-21233065 None:intergenic 35.0%
! TGGAAAAGCTTTTACTGCAA+AGG - chr1_2:21233120-21233139 Msa0062120:intron 35.0%
! GGAAAAGCTTTTACTGCAAA+GGG - chr1_2:21233121-21233140 Msa0062120:intron 35.0%
AATGCAAGTGCTTGAATATG+TGG - chr1_2:21233144-21233163 Msa0062120:intron 35.0%
ATGCAAGTGCTTGAATATGT+GGG - chr1_2:21233145-21233164 Msa0062120:intron 35.0%
!! ACAATTTGTTGGGGTATGTT+TGG - chr1_2:21233380-21233399 Msa0062120:intron 35.0%
AGAATCCCTCTCTATCTATT+TGG - chr1_2:21233513-21233532 Msa0062120:intron 35.0%
CTCAACCAAATAGATAGAGA+GGG + chr1_2:21233521-21233540 None:intergenic 35.0%
ACTCAACCAAATAGATAGAG+AGG + chr1_2:21233522-21233541 None:intergenic 35.0%
! CAACAGTAGTGCTCTTTTTA+TGG + chr1_2:21233741-21233760 None:intergenic 35.0%
!! CATTGGTTCTTCATGTAACA+GGG + chr1_2:21234003-21234022 None:intergenic 35.0%
!! ACATTGGTTCTTCATGTAAC+AGG + chr1_2:21234004-21234023 None:intergenic 35.0%
ATTTCCAGTATCACCTTGTA+AGG + chr1_2:21234064-21234083 None:intergenic 35.0%
!!! GAATTAGAAGTTGGTTTTGG+AGG + chr1_2:21234144-21234163 None:intergenic 35.0%
GGTGAGGAATAACAGTAAAT+TGG + chr1_2:21234175-21234194 None:intergenic 35.0%
ATTTCGCCCCTATTTACTAA+TGG - chr1_2:21234253-21234272 Msa0062120:intron 35.0%
TTTCGCCCCTATTTACTAAT+GGG - chr1_2:21234254-21234273 Msa0062120:intron 35.0%
CACTACCCATTAGTAAATAG+GGG + chr1_2:21234262-21234281 None:intergenic 35.0%
CCACTACCCATTAGTAAATA+GGG + chr1_2:21234263-21234282 None:intergenic 35.0%
! CCTATTTACTAATGGGTAGT+GGG - chr1_2:21234261-21234280 Msa0062120:intron 35.0%
TGAAAGAAGCAAAAAGCAGT+GGG - chr1_2:21234355-21234374 Msa0062120:intron 35.0%
ATGGCATTATGATACTCCAA+CGG + chr1_2:21234459-21234478 None:intergenic 35.0%
GTTCGTAATGATATGACAGA+AGG + chr1_2:21235031-21235050 None:intergenic 35.0%
! TGAAACTACAAGGATTTTGG+TGG + chr1_2:21235106-21235125 None:intergenic 35.0%
ACAGTGCAATTGAAACTACA+AGG + chr1_2:21235116-21235135 None:intergenic 35.0%
CCAACTTTAACTCAAAACTG+TGG + chr1_2:21235495-21235514 None:intergenic 35.0%
!!! CCACAGTTTTGAGTTAAAGT+TGG - chr1_2:21235492-21235511 Msa0062120:intron 35.0%
!! ATTTGAATGTTGGGTTGGAT+TGG - chr1_2:21235599-21235618 Msa0062120:intron 35.0%
AGAAAGCTCAGTAACATCTA+TGG - chr1_2:21235673-21235692 Msa0062120:intron 35.0%
TTTCAGTTTCACAAATGCCT+TGG - chr1_2:21235864-21235883 Msa0062120:intron 35.0%
ATTAGACTCTCTTCATTCTG+AGG - chr1_2:21235930-21235949 Msa0062120:intron 35.0%
TTAGACTCTCTTCATTCTGA+GGG - chr1_2:21235931-21235950 Msa0062120:intron 35.0%
! ATGATGATGAAAAGAGAGAG+AGG + chr1_2:21236019-21236038 None:intergenic 35.0%
! TCTCTTTTCATCATCATGCA+AGG - chr1_2:21236022-21236041 Msa0062120:intron 35.0%
GTTTCACAACTTCTAACGTT+TGG - chr1_2:21236116-21236135 Msa0062120:intron 35.0%
TTTGTTGGCAAGAGAAATGA+TGG + chr1_2:21236147-21236166 None:intergenic 35.0%
!! TGAAGAAGTTGATGACGATA+AGG - chr1_2:21236175-21236194 Msa0062120:intron 35.0%
ATAAATGCCCAGACAATGAT+TGG - chr1_2:21236248-21236267 Msa0062120:intron 35.0%
! GTTTCCAACAGTTTTACTAC+AGG - chr1_2:21236284-21236303 Msa0062120:intron 35.0%
TAGTTAACCAAATCAACCCA+TGG + chr1_2:21236368-21236387 None:intergenic 35.0%
!! TGGGTTGATTTGGTTAACTA+TGG - chr1_2:21236368-21236387 Msa0062120:intron 35.0%
!! AGTTATTTTCCCCTGTGATT+AGG - chr1_2:21236620-21236639 Msa0062120:CDS 35.0%
!! GTTATTTTCCCCTGTGATTA+GGG - chr1_2:21236621-21236640 Msa0062120:CDS 35.0%
AATCCCTGGGAAATTTCTAA+GGG + chr1_2:21236677-21236696 None:intergenic 35.0%
ATGAGCATTATACAATCCCT+GGG + chr1_2:21236690-21236709 None:intergenic 35.0%
GGATTGTATAATGCTCATGT+GGG - chr1_2:21236692-21236711 Msa0062120:CDS 35.0%
! ATCTAAAATATTCACCGGGA+AGG - chr1_2:21236729-21236748 Msa0062120:CDS 35.0%
CAAGTTGTATGTTTACTTGG+TGG - chr1_2:21236791-21236810 Msa0062120:intron 35.0%
! AATGTCACTCCTTCCTTTTT+AGG - chr1_2:21236814-21236833 Msa0062120:intron 35.0%
CTTGCAATACCTAAAAAGGA+AGG + chr1_2:21236826-21236845 None:intergenic 35.0%
! AAGTCTTCCGTAATTTGTGT+TGG - chr1_2:21236843-21236862 Msa0062120:intron 35.0%
CAGAAACCTATGGAAAAAGT+AGG + chr1_2:21236891-21236910 None:intergenic 35.0%
TGGACATAAACAGAAACCTA+TGG + chr1_2:21236901-21236920 None:intergenic 35.0%
ACAAGACTACTTGAGCATAT+GGG + chr1_2:21236924-21236943 None:intergenic 35.0%
ACAGTCTCTTGTGTAAAAAC+AGG - chr1_2:21237170-21237189 Msa0062120:intron 35.0%
CAGTCTCTTGTGTAAAAACA+GGG - chr1_2:21237171-21237190 Msa0062120:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr1_2:21237176-21237195 Msa0062120:intron 35.0%
AAAACAAAAAAAGGGCAACC+CGG + chr1_2:21237268-21237287 None:intergenic 35.0%
! GCAATTAAGCTAAAGCACTA+TGG - chr1_2:21237314-21237333 Msa0062120:intron 35.0%
CACAGCTATAAGTAAAATCC+AGG - chr1_2:21237640-21237659 Msa0062120:CDS 35.0%
GCTATAAGTAAAATCCAGGA+TGG - chr1_2:21237644-21237663 Msa0062120:CDS 35.0%
GTGATACCACTAAACTATTC+TGG - chr1_2:21237765-21237784 Msa0062120:five_prime_UTR 35.0%
GATACCACTAAACTATTCTG+GGG - chr1_2:21237767-21237786 Msa0062120:five_prime_UTR 35.0%
TTCAGACACTAGTAAGTGTT+AGG + chr1_2:21237822-21237841 None:intergenic 35.0%
AATGCTCTTTGATGCTGTCT+CGG + chr1_2:21231366-21231385 None:intergenic 40.0%
! GTCTTCTAAAGAGGATGTAG+TGG - chr1_2:21231418-21231437 Msa0062120:intron 40.0%
AGTGGATGAAGAAGCTGAAA+AGG - chr1_2:21231436-21231455 Msa0062120:intron 40.0%
TGAAGATTCACTACTTAGCC+AGG - chr1_2:21231526-21231545 Msa0062120:intron 40.0%
TGTCGCAGCATAATTGTATC+GGG - chr1_2:21231856-21231875 Msa0062120:CDS 40.0%
! TGCATTTTTCCCACTATGTG+GGG + chr1_2:21232007-21232026 None:intergenic 40.0%
GTAATGTGTGTAGGGTTTGA+AGG - chr1_2:21232079-21232098 Msa0062120:intron 40.0%
GTTGCTGATCACTACTAGTA+TGG - chr1_2:21232267-21232286 Msa0062120:intron 40.0%
CTACTAGTATGGTGATACCT+TGG - chr1_2:21232278-21232297 Msa0062120:intron 40.0%
TAATTGGGCCCCTTTACATT+AGG - chr1_2:21232459-21232478 Msa0062120:intron 40.0%
GAGTCTTGCCTAATGTAAAG+GGG + chr1_2:21232470-21232489 None:intergenic 40.0%
!! TGATAAGCTTGGTGTTGTTG+CGG + chr1_2:21232583-21232602 None:intergenic 40.0%
GAGAATTCAGCTTCAAACCT+TGG - chr1_2:21232947-21232966 Msa0062120:intron 40.0%
AATTCAGCTTCAAACCTTGG+AGG - chr1_2:21232950-21232969 Msa0062120:intron 40.0%
TAATGCACCTTCCCTATTAG+AGG - chr1_2:21233009-21233028 Msa0062120:intron 40.0%
! GAGTTTTCCGAACCTCTAAT+AGG + chr1_2:21233024-21233043 None:intergenic 40.0%
AGTGCTTGAATATGTGGGTA+AGG - chr1_2:21233150-21233169 Msa0062120:intron 40.0%
TTTGTTGGGGTATGTTTGGT+TGG - chr1_2:21233384-21233403 Msa0062120:intron 40.0%
TTGTTGGGGTATGTTTGGTT+GGG - chr1_2:21233385-21233404 Msa0062120:intron 40.0%
GGAATAAGTATCATGTCGGT+CGG - chr1_2:21233878-21233897 Msa0062120:intron 40.0%
!!! AGAAGTTGGTTTTGGAGGTT+GGG + chr1_2:21234139-21234158 None:intergenic 40.0%
!!! TAGAAGTTGGTTTTGGAGGT+TGG + chr1_2:21234140-21234159 None:intergenic 40.0%
TGAATAGACAGTATAGGGTG+AGG + chr1_2:21234191-21234210 None:intergenic 40.0%
! TTCTAGGAGACATAGAGAAG+AGG + chr1_2:21234219-21234238 None:intergenic 40.0%
GGGCGAAATAAAATTGAGCA+TGG + chr1_2:21234242-21234261 None:intergenic 40.0%
! CCCTATTTACTAATGGGTAG+TGG - chr1_2:21234260-21234279 Msa0062120:intron 40.0%
CCCACTACCCATTAGTAAAT+AGG + chr1_2:21234264-21234283 None:intergenic 40.0%
CCTCTTTGTCCTTCATTGAT+CGG + chr1_2:21234294-21234313 None:intergenic 40.0%
GTGAAAGAAGCAAAAAGCAG+TGG - chr1_2:21234354-21234373 Msa0062120:intron 40.0%
TGGCATTATGATACTCCAAC+GGG + chr1_2:21234458-21234477 None:intergenic 40.0%
TGTAGGTAGAAGTGGAGAAA+TGG + chr1_2:21234778-21234797 None:intergenic 40.0%
!!! GTAAATTTTTTGGTGGTGGC+CGG - chr1_2:21234874-21234893 Msa0062120:CDS 40.0%
!!! TAAATTTTTTGGTGGTGGCC+GGG - chr1_2:21234875-21234894 Msa0062120:CDS 40.0%
TGCATACAATATGCAAGGTC+CGG + chr1_2:21234910-21234929 None:intergenic 40.0%
GAGCAAAAGTCTGCATTTGA+CGG - chr1_2:21235249-21235268 Msa0062120:intron 40.0%
AGCAAAAGTCTGCATTTGAC+GGG - chr1_2:21235250-21235269 Msa0062120:intron 40.0%
ATTTGACGGGAAGCTTAAAG+AGG - chr1_2:21235263-21235282 Msa0062120:intron 40.0%
AAGAAAGGAAATGCAGGAAG+CGG - chr1_2:21235354-21235373 Msa0062120:intron 40.0%
TAACTCAAAACTGTGGCAAC+AGG + chr1_2:21235488-21235507 None:intergenic 40.0%
! ACAATTTTTCTCCAAGGGTG+TGG - chr1_2:21235540-21235559 Msa0062120:intron 40.0%
ACAGGACCACAAAGTTAAGT+GGG + chr1_2:21235743-21235762 None:intergenic 40.0%
AACAGGACCACAAAGTTAAG+TGG + chr1_2:21235744-21235763 None:intergenic 40.0%
! AACTAGCTTCAGATAGGAAC+AGG + chr1_2:21235761-21235780 None:intergenic 40.0%
! GGGGCATTCTCAATCAATAA+GGG + chr1_2:21235809-21235828 None:intergenic 40.0%
ATCACATAATTGGGAAGAGG+GGG + chr1_2:21235828-21235847 None:intergenic 40.0%
CATCACATAATTGGGAAGAG+GGG + chr1_2:21235829-21235848 None:intergenic 40.0%
GCATCACATAATTGGGAAGA+GGG + chr1_2:21235830-21235849 None:intergenic 40.0%
TGCATCACATAATTGGGAAG+AGG + chr1_2:21235831-21235850 None:intergenic 40.0%
!! TTCTTCATCCTCGGTTTTGT+TGG + chr1_2:21236162-21236181 None:intergenic 40.0%
GTCATCAACTTCTTCATCCT+CGG + chr1_2:21236171-21236190 None:intergenic 40.0%
ACGATAAGGCTAACATAGAG+TGG - chr1_2:21236189-21236208 Msa0062120:intron 40.0%
! GCTTTTGCAGAAACATCTTC+AGG + chr1_2:21236215-21236234 None:intergenic 40.0%
CCAACCTGTAGTAAAACTGT+TGG + chr1_2:21236291-21236310 None:intergenic 40.0%
! CCAACAGTTTTACTACAGGT+TGG - chr1_2:21236288-21236307 Msa0062120:intron 40.0%
!! ATCTACACCATGGGTTGATT+TGG - chr1_2:21236358-21236377 Msa0062120:intron 40.0%
TTCAACGGTTATGTTGTCAG+TGG - chr1_2:21236469-21236488 Msa0062120:intron 40.0%
AGGATGTTGATATAGTCCCT+TGG - chr1_2:21236650-21236669 Msa0062120:CDS 40.0%
! GGAAATTTCTAAGGGTCCAA+GGG + chr1_2:21236669-21236688 None:intergenic 40.0%
CAATCCCTGGGAAATTTCTA+AGG + chr1_2:21236678-21236697 None:intergenic 40.0%
CATGAGCATTATACAATCCC+TGG + chr1_2:21236691-21236710 None:intergenic 40.0%
GGGATTGTATAATGCTCATG+TGG - chr1_2:21236691-21236710 Msa0062120:CDS 40.0%
TTGTACGACTATTTCCTTCC+CGG + chr1_2:21236746-21236765 None:intergenic 40.0%
! TGGTTACCTTTCGATTTTCG+TGG - chr1_2:21236863-21236882 Msa0062120:intron 40.0%
! GGTTACCTTTCGATTTTCGT+GGG - chr1_2:21236864-21236883 Msa0062120:intron 40.0%
CACAAGACTACTTGAGCATA+TGG + chr1_2:21236925-21236944 None:intergenic 40.0%
TAAGCTATAAGGGGTAACCT+TGG - chr1_2:21237090-21237109 Msa0062120:intron 40.0%
TTACACAAGAGACTGTTTCC+AGG + chr1_2:21237166-21237185 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_2:21237202-21237221 Msa0062120:intron 40.0%
CTCAGAAATAGTCTGCTTCA+TGG + chr1_2:21237446-21237465 None:intergenic 40.0%
AGGCATATCTGATGTAACTG+AGG - chr1_2:21237502-21237521 Msa0062120:intron 40.0%
ACCTTTAATGGCTGCTTGAT+AGG + chr1_2:21237528-21237547 None:intergenic 40.0%
CTCAGCAGTAACACCTTTAA+TGG + chr1_2:21237540-21237559 None:intergenic 40.0%
TCTTGGACTGATGTCTTCTT+GGG + chr1_2:21237578-21237597 None:intergenic 40.0%
ATCTTGGACTGATGTCTTCT+TGG + chr1_2:21237579-21237598 None:intergenic 40.0%
!! AGAAAGCACTGGCTTTATCT+TGG + chr1_2:21237595-21237614 None:intergenic 40.0%
TTTGCCCCAGAATAGTTTAG+TGG + chr1_2:21237774-21237793 None:intergenic 40.0%
ACACTTACTAGTGTCTGAAC+TGG - chr1_2:21237823-21237842 Msa0062120:intron 40.0%
CACTTACTAGTGTCTGAACT+GGG - chr1_2:21237824-21237843 Msa0062120:intron 40.0%
ACTTACTAGTGTCTGAACTG+GGG - chr1_2:21237825-21237844 Msa0062120:intron 40.0%
!! AGCGGCAGCTTTTTGAAGAT+CGG + chr1_2:21230530-21230549 None:intergenic 45.0%
ATTGCGAGAGATTTCTTCGG+CGG + chr1_2:21230557-21230576 None:intergenic 45.0%
!!! TTGGTTTTTTCATGTCCGCG+TGG - chr1_2:21231119-21231138 Msa0062120:intron 45.0%
!! GACAGCATCAAAGAGCATTG+CGG - chr1_2:21231367-21231386 Msa0062120:intron 45.0%
! AGACTCGGAGTCTTCTAAAG+AGG - chr1_2:21231409-21231428 Msa0062120:intron 45.0%
AGTATCCTTTGATGCTTGCC+TGG + chr1_2:21231547-21231566 None:intergenic 45.0%
GTCGCAGCATAATTGTATCG+GGG - chr1_2:21231857-21231876 Msa0062120:CDS 45.0%
TCGCAGCATAATTGTATCGG+GGG - chr1_2:21231858-21231877 Msa0062120:CDS 45.0%
ACTATGTGGGGTTGTCTACA+TGG + chr1_2:21231995-21232014 None:intergenic 45.0%
ATGTAGACAACCCCACATAG+TGG - chr1_2:21231994-21232013 Msa0062120:CDS 45.0%
TGTAGACAACCCCACATAGT+GGG - chr1_2:21231995-21232014 Msa0062120:CDS 45.0%
CGGAGCTCAAGTATAAGTGA+TGG + chr1_2:21232060-21232079 None:intergenic 45.0%
TTGAGCTCCGTAATGTGTGT+AGG - chr1_2:21232070-21232089 Msa0062120:intron 45.0%
TGAGCTCCGTAATGTGTGTA+GGG - chr1_2:21232071-21232090 Msa0062120:intron 45.0%
! TCTGTGGAGACTTTTGCTTC+TGG - chr1_2:21232113-21232132 Msa0062120:intron 45.0%
!!! AGACTTTTGCTTCTGGAGCA+TGG - chr1_2:21232120-21232139 Msa0062120:intron 45.0%
!! GGAGTGCTTTAGGAAATGCA+TGG - chr1_2:21232141-21232160 Msa0062120:intron 45.0%
!! GCTTTAGGAAATGCATGGAG+AGG - chr1_2:21232146-21232165 Msa0062120:intron 45.0%
TTAGGAAATGCATGGAGAGG+TGG - chr1_2:21232149-21232168 Msa0062120:intron 45.0%
AAGCTCTTCTCAGTCAACAG+AGG + chr1_2:21232767-21232786 None:intergenic 45.0%
CACCTTCCCTATTAGAGGTT+CGG - chr1_2:21233014-21233033 Msa0062120:intron 45.0%
TTCCGAACCTCTAATAGGGA+AGG + chr1_2:21233019-21233038 None:intergenic 45.0%
ATATGTGGGTAAGGAGACGA+TGG - chr1_2:21233159-21233178 Msa0062120:intron 45.0%
TCGGCACTTGCCACAATAAT+AGG - chr1_2:21233897-21233916 Msa0062120:intron 45.0%
ATAGAGGCAAGCTCCTTACA+AGG - chr1_2:21234048-21234067 Msa0062120:intron 45.0%
AGCTCCTTACAAGGTGATAC+TGG - chr1_2:21234057-21234076 Msa0062120:intron 45.0%
!!! GAAGTTGGTTTTGGAGGTTG+GGG + chr1_2:21234138-21234157 None:intergenic 45.0%
CCGATCAATGAAGGACAAAG+AGG - chr1_2:21234291-21234310 Msa0062120:intron 45.0%
AGCAGAGACACGAGAAAAGT+GGG + chr1_2:21234382-21234401 None:intergenic 45.0%
TAGCAGAGACACGAGAAAAG+TGG + chr1_2:21234383-21234402 None:intergenic 45.0%
GGCATTATGATACTCCAACG+GGG + chr1_2:21234457-21234476 None:intergenic 45.0%
TAGAGTAAGGAGTCCAGTGT+TGG - chr1_2:21234500-21234519 Msa0062120:intron 45.0%
CATACAATATGCAAGGTCCG+GGG + chr1_2:21234908-21234927 None:intergenic 45.0%
GCATACAATATGCAAGGTCC+GGG + chr1_2:21234909-21234928 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + chr1_2:21234938-21234957 None:intergenic 45.0%
!! GCTGGTGCTGATTCTAACAA+AGG - chr1_2:21235321-21235340 Msa0062120:intron 45.0%
!! ACATGATGCAAGTGTTGGCA+AGG - chr1_2:21235395-21235414 Msa0062120:intron 45.0%
AAAACTGTGGCAACAGGAGT+GGG + chr1_2:21235482-21235501 None:intergenic 45.0%
AACCAATAGTTCCACACCCT+TGG + chr1_2:21235554-21235573 None:intergenic 45.0%
!! GGGGGCATTCTCAATCAATA+AGG + chr1_2:21235810-21235829 None:intergenic 45.0%
AGTTTCACAAATGCCTTGGC+TGG - chr1_2:21235868-21235887 Msa0062120:intron 45.0%
!! GTCTGAAATGTGCTGTTTCG+CGG - chr1_2:21236094-21236113 Msa0062120:intron 45.0%
TTCTCTTGCCAACAAAACCG+AGG - chr1_2:21236151-21236170 Msa0062120:intron 45.0%
TGTCAGTGGTTAGTAGACCA+TGG - chr1_2:21236483-21236502 Msa0062120:intron 45.0%
GAACCCTAAAGCCAACTGAA+GGG + chr1_2:21236524-21236543 None:intergenic 45.0%
TGAACCCTAAAGCCAACTGA+AGG + chr1_2:21236525-21236544 None:intergenic 45.0%
CTCAAAAGCCCTAATCACAG+GGG + chr1_2:21236632-21236651 None:intergenic 45.0%
CCTCAAAAGCCCTAATCACA+GGG + chr1_2:21236633-21236652 None:intergenic 45.0%
TCCTCAAAAGCCCTAATCAC+AGG + chr1_2:21236634-21236653 None:intergenic 45.0%
! GGGAAATTTCTAAGGGTCCA+AGG + chr1_2:21236670-21236689 None:intergenic 45.0%
TGGACCCTTAGAAATTTCCC+AGG - chr1_2:21236670-21236689 Msa0062120:CDS 45.0%
GGACCCTTAGAAATTTCCCA+GGG - chr1_2:21236671-21236690 Msa0062120:CDS 45.0%
TAGGACCCACGAAAATCGAA+AGG + chr1_2:21236872-21236891 None:intergenic 45.0%
!!! GTGGGTCCTACTTTTTCCAT+AGG - chr1_2:21236882-21236901 Msa0062120:intron 45.0%
AGACTACTTGAGCATATGGG+TGG + chr1_2:21236921-21236940 None:intergenic 45.0%
GTTGTTGTCATGTGACCGTA+AGG - chr1_2:21237126-21237145 Msa0062120:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_2:21237198-21237217 Msa0062120:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_2:21237201-21237220 Msa0062120:intron 45.0%
GCCTATCAAGCAGCCATTAA+AGG - chr1_2:21237524-21237543 Msa0062120:intron 45.0%
GTCTTCTTGGGAACAACTGT+GGG + chr1_2:21237566-21237585 None:intergenic 45.0%
TGTCTTCTTGGGAACAACTG+TGG + chr1_2:21237567-21237586 None:intergenic 45.0%
! AAGGTGTTCAGAGAAAGCAC+TGG + chr1_2:21237606-21237625 None:intergenic 45.0%
CTGTGATTTGATCAGCTCGA+AGG + chr1_2:21237625-21237644 None:intergenic 45.0%
CTAAAAATTGCACCCCATCC+TGG + chr1_2:21237661-21237680 None:intergenic 45.0%
TGTTCAAGCAGCATTCATCG+AGG + chr1_2:21237702-21237721 None:intergenic 45.0%
GAACAAGCAACACAAGACGC+CGG - chr1_2:21230460-21230479 Msa0062120:CDS 50.0%
CACGATCTGGGTTGCAACAT+TGG - chr1_2:21231100-21231119 Msa0062120:intron 50.0%
AAGTTGTGGCAAAAGCCACG+CGG + chr1_2:21231137-21231156 None:intergenic 50.0%
GCAAATCGCTGCTGAAGACT+CGG - chr1_2:21231394-21231413 Msa0062120:intron 50.0%
CTTAGCCAGGCAAGCATCAA+AGG - chr1_2:21231539-21231558 Msa0062120:intron 50.0%
! TCTGGAGCATGGAGTGCTTT+AGG - chr1_2:21232131-21232150 Msa0062120:intron 50.0%
TAACAGTGCAATGCCCGTGT+AGG + chr1_2:21232242-21232261 None:intergenic 50.0%
CTTCTCAGTCAACAGAGGTC+AGG + chr1_2:21232762-21232781 None:intergenic 50.0%
GCATTAGAACCTGGAGTTCC+TGG + chr1_2:21232995-21233014 None:intergenic 50.0%
! AGGGAAGGTGCATTAGAACC+TGG + chr1_2:21233004-21233023 None:intergenic 50.0%
AAAGTTACCTCCAGCTGCTC+TGG + chr1_2:21233310-21233329 None:intergenic 50.0%
GAGTGGAGTCTTCTATCAGC+AGG + chr1_2:21234105-21234124 None:intergenic 50.0%
! GTCCTTCATTGATCGGTGCT+AGG + chr1_2:21234287-21234306 None:intergenic 50.0%
CAACGGGGCAGAAAGAAAGT+TGG + chr1_2:21234442-21234461 None:intergenic 50.0%
CAACTTTCTTTCTGCCCCGT+TGG - chr1_2:21234440-21234459 Msa0062120:intron 50.0%
GAGTATCTGTGCAACGCACA+GGG - chr1_2:21234544-21234563 Msa0062120:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr1_2:21234939-21234958 None:intergenic 50.0%
TGTTGGCAAGGCTGCTGAAA+TGG - chr1_2:21235407-21235426 Msa0062120:intron 50.0%
CAAAACTGTGGCAACAGGAG+TGG + chr1_2:21235483-21235502 None:intergenic 50.0%
! CTCCAAGGGTGTGGAACTAT+TGG - chr1_2:21235549-21235568 Msa0062120:intron 50.0%
CCAACTGAAGGGAGCTTCTA+GGG + chr1_2:21236513-21236532 None:intergenic 50.0%
!! AGCTCCCTTCAGTTGGCTTT+AGG - chr1_2:21236517-21236536 Msa0062120:intron 50.0%
!! GCTCCCTTCAGTTGGCTTTA+GGG - chr1_2:21236518-21236537 Msa0062120:intron 50.0%
! CCCTGTGATTAGGGCTTTTG+AGG - chr1_2:21236630-21236649 Msa0062120:CDS 50.0%
GTGTGCTGCACATGATCAGT+GGG - chr1_2:21236970-21236989 Msa0062120:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr1_2:21237110-21237129 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG - chr1_2:21237132-21237151 Msa0062120:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG - chr1_2:21237133-21237152 Msa0062120:intron 50.0%
GACTTGAACCCGTGACCTTA+CGG + chr1_2:21237144-21237163 None:intergenic 50.0%
CAGCATTCATCGAGGTCGAA+AGG + chr1_2:21237694-21237713 None:intergenic 50.0%
GATTTCTTCGGCGGCAACAG+CGG + chr1_2:21230548-21230567 None:intergenic 55.0%
CATGCGGTACAGATCCTCCA+AGG + chr1_2:21232967-21232986 None:intergenic 55.0%
GGAGGATCTGTACCGCATGA+TGG - chr1_2:21232968-21232987 Msa0062120:intron 55.0%
!! TCTGTACCGCATGATGGACC+AGG - chr1_2:21232974-21232993 Msa0062120:intron 55.0%
GGAGTTCCTGGTCCATCATG+CGG + chr1_2:21232983-21233002 None:intergenic 55.0%
!! CATGATGGACCAGGAACTCC+AGG - chr1_2:21232983-21233002 Msa0062120:intron 55.0%
TTATGGAGGTCCAGAGCAGC+TGG - chr1_2:21233297-21233316 Msa0062120:intron 55.0%
GGGACTGTTCGTTCTGCTTG+AGG + chr1_2:21233983-21234002 None:intergenic 55.0%
GTTGGGGCTGTGTAGAAGAG+TGG + chr1_2:21234122-21234141 None:intergenic 55.0%
!! GGCCTAGCACCGATCAATGA+AGG - chr1_2:21234282-21234301 Msa0062120:intron 55.0%
! GGAGTATCTGTGCAACGCAC+AGG - chr1_2:21234543-21234562 Msa0062120:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr1_2:21234943-21234962 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr1_2:21234940-21234959 Msa0062120:CDS 55.0%
AAGGCTGCTGAAATGGCTGC+TGG - chr1_2:21235414-21235433 Msa0062120:intron 55.0%
AGGCTGCTGAAATGGCTGCT+GGG - chr1_2:21235415-21235434 Msa0062120:intron 55.0%
ATTAGCAGCTAGGCCAGCCA+AGG + chr1_2:21235884-21235903 None:intergenic 55.0%
! ACTGAAGGGAGCTTCTAGGG+TGG + chr1_2:21236510-21236529 None:intergenic 55.0%
CCCTAGAAGCTCCCTTCAGT+TGG - chr1_2:21236510-21236529 Msa0062120:intron 55.0%
GCCAACTGAAGGGAGCTTCT+AGG + chr1_2:21236514-21236533 None:intergenic 55.0%
GGTGTGCTGCACATGATCAG+TGG - chr1_2:21236969-21236988 Msa0062120:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr1_2:21237145-21237164 Msa0062120:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG + chr1_2:21237241-21237260 None:intergenic 55.0%
ACTGAAGCTCCCGCATATGC+AGG + chr1_2:21237242-21237261 None:intergenic 55.0%
CAAGCAACACAAGACGCCGG+TGG - chr1_2:21230463-21230482 Msa0062120:CDS 60.0%
AAGGTCCGGGGTTCGAATCC+CGG + chr1_2:21234896-21234915 None:intergenic 60.0%
!! GGAGCTTCTAGGGTGGACCA+TGG + chr1_2:21236503-21236522 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr1_2:21237099-21237118 Msa0062120:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr1_2:21237214-21237233 Msa0062120:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr1_2:21237229-21237248 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr1_2:21237230-21237249 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr1_2:21237229-21237248 Msa0062120:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr1_2:21237230-21237249 Msa0062120:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr1_2:21237246-21237265 Msa0062120:intron 60.0%
GCAACACAAGACGCCGGTGG+CGG - chr1_2:21230466-21230485 Msa0062120:CDS 65.0%
CGGCGGAAATTGGGGCGGTT+GGG - chr1_2:21230486-21230505 Msa0062120:CDS 65.0%
GGCGGAAATTGGGGCGGTTG+GGG - chr1_2:21230487-21230506 Msa0062120:CDS 65.0%
TGGAGGTCCAGAGCAGCTGG+AGG - chr1_2:21233300-21233319 Msa0062120:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr1_2:21237216-21237235 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr1_2:21237231-21237250 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr1_2:21237235-21237254 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr1_2:21237236-21237255 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr1_2:21237247-21237266 Msa0062120:intron 65.0%
! ACACAAGACGCCGGTGGCGG+CGG - chr1_2:21230469-21230488 Msa0062120:CDS 70.0%
! ACGCCGGTGGCGGCGGAAAT+TGG - chr1_2:21230476-21230495 Msa0062120:CDS 70.0%
! CGCCGGTGGCGGCGGAAATT+GGG - chr1_2:21230477-21230496 Msa0062120:CDS 70.0%
! GCCGGTGGCGGCGGAAATTG+GGG - chr1_2:21230478-21230497 Msa0062120:CDS 70.0%
GCCCCAATTTCCGCCGCCAC+CGG + chr1_2:21230482-21230501 None:intergenic 70.0%
! GGTGGCGGCGGAAATTGGGG+CGG - chr1_2:21230481-21230500 Msa0062120:CDS 70.0%
GCGGCGGAAATTGGGGCGGT+TGG - chr1_2:21230485-21230504 Msa0062120:CDS 70.0%
GGTGGCCGGGATTCGAACCC+CGG - chr1_2:21234888-21234907 Msa0062120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 21230181 21237943 21230181 ID=Msa0062120;Name=Msa0062120
chr1_2 mRNA 21230181 21237943 21230181 ID=Msa0062120-mRNA-1;Parent=Msa0062120;Name=Msa0062120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=166|1|1|1|0.88|0.8|10|225|508
chr1_2 exon 21230181 21230620 21230181 ID=Msa0062120-mRNA-1:exon:7912;Parent=Msa0062120-mRNA-1
chr1_2 exon 21231819 21232035 21231819 ID=Msa0062120-mRNA-1:exon:7911;Parent=Msa0062120-mRNA-1
chr1_2 exon 21232164 21232254 21232164 ID=Msa0062120-mRNA-1:exon:7910;Parent=Msa0062120-mRNA-1
chr1_2 exon 21232688 21232941 21232688 ID=Msa0062120-mRNA-1:exon:7909;Parent=Msa0062120-mRNA-1
chr1_2 exon 21234803 21235006 21234803 ID=Msa0062120-mRNA-1:exon:7908;Parent=Msa0062120-mRNA-1
chr1_2 exon 21235094 21235181 21235094 ID=Msa0062120-mRNA-1:exon:7907;Parent=Msa0062120-mRNA-1
chr1_2 exon 21235935 21236032 21235935 ID=Msa0062120-mRNA-1:exon:7906;Parent=Msa0062120-mRNA-1
chr1_2 exon 21236577 21236774 21236577 ID=Msa0062120-mRNA-1:exon:7905;Parent=Msa0062120-mRNA-1
chr1_2 exon 21237548 21237792 21237548 ID=Msa0062120-mRNA-1:exon:7904;Parent=Msa0062120-mRNA-1
chr1_2 exon 21237861 21237943 21237861 ID=Msa0062120-mRNA-1:exon:7903;Parent=Msa0062120-mRNA-1
chr1_2 five_prime_UTR 21237861 21237943 21237861 ID=Msa0062120-mRNA-1:five_prime_utr;Parent=Msa0062120-mRNA-1
chr1_2 five_prime_UTR 21237710 21237792 21237710 ID=Msa0062120-mRNA-1:five_prime_utr;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21237548 21237709 21237548 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21236577 21236774 21236577 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21235935 21236032 21235935 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21235094 21235181 21235094 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21234803 21235006 21234803 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21232688 21232941 21232688 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21232164 21232254 21232164 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21231819 21232035 21231819 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 CDS 21230406 21230620 21230406 ID=Msa0062120-mRNA-1:cds;Parent=Msa0062120-mRNA-1
chr1_2 three_prime_UTR 21230181 21230405 21230181 ID=Msa0062120-mRNA-1:three_prime_utr;Parent=Msa0062120-mRNA-1
Gene Sequence

>Msa0062120

ATGGACGACAAAACGCACTCTAACAACGACAATGAACAACTTTCTGAACAAGCAACACAAGACGCCGGTGGCGGCGGAAATTGGGGCGGTTGGGGCTTTTCTTCCATTCTCTCCGATCTTCAAAAAGCTGCCGCTGTTGCCGCCGAAGAAATCTCTCGCAATGCTGCTTCAGTTGCCGAGACAGCATCAAAGAGCATTGCGGAGTTGCAAATCGCTGCTGAAGACTCGGAGTCTTCTAAAGAGGATGTAGTGGATGAAGAAGCTGAAAAGGAAAGCGACGATGAGAGTGATGCTGCTCCATTACGAAAATCTGCTCTAGATAAATTGGAGAAAGCTAGTGAAGATTCACTACTTAGCCAGGGTTTGAAGGTTTTCGATAATTCTGTGGAGACTTTTGCTTCTGGAGCATGGAGTGCTTTAGGAAATGCATGGAGAGGTGGCAGTGAGTTAGTTCACAAGCTCGAGAATTCAGCTTCAAACCTTGGAGGATCTGTACCGCATGATGGACCAGGAACTCCAGGTTCTAATGCACCTTCCCTATTAGAGACTGGAAAAGCTTTTACTGCAAAGGGAATGCAAGTGCTTGAATATGTGGGTAAGGAGACGATGGACTTATTAATCAGTGAAACTGGAATTGAGATTGAAAAGGCTAGAAAAGAAGGTGATGACCAAAGCGATGAAGATCAATTATCAGAAGAAGTGACATTTGATCGATGTTTTTACATTTATGGAGGTCCAGAGCAGCTGGAGGAACTGGAGGCTTTGTCTAGTCATTATGCCTTGTTGTTTAACAGAAGAAAAGCAAAATTATCTGCAGAGCAAAAGTCTGCATTTGACGGGAAGCTTAAAGAGGTCCAACAAATTTTTGATTTGAGTAATGAAATTGATGCTGGTGCTGATTCTAACAAAGGAAAAACAATAAAGAAAGGAAATGCAGGAAGCGGTGATGAGATCAAGAATTTACATGATGCAAGTGTTGGCAAGGCTGCTGAAATGGCTGCTGGTTTCACAAATGCCTTGGCTGGCCTAGCTGCTAATGATATAATTCAGAGAACTACTGGAAGATTAGACTCTCTTCATTCTGAGGGAGTTCATAGACTGTCTGAAATGTGCTGTTTCGCGGTTTCACAACTTCTAACGTTTGGCAAATCCATCATTTCTCTTGCCAACAAAACCGAGGATGAAGAAGTTGATGACGATAAGGCTAACATAGAGTGGCCTGAAGATGTTTCTGCAAAAGCTAAGATCATAAGAATAAATGCCCAGACAATGATTGGATATTTAGAAGCAGTTTCCAACAGTTTTACTACAGGCATATCTGATGTAACTGAGGCCTATCAAGCAGCCATTAAAGGTGTTACTGCTGAGTCTCCCACAGTTGTTCCCAAGAAGACATCAGTCCAAGATAAAGCCAGTGCTTTCTCTGAACACCTTCGAGCTGATCAAATCACAGCTATAAGTAAAATCCAGGATGGGGTGCAATTTTTAGCTCACGTCATCCTTTCGACCTCGATGAATGCTGCTTGA

Protein sequence

>Msa0062120

MDDKTHSNNDNEQLSEQATQDAGGGGNWGGWGFSSILSDLQKAAAVAAEEISRNAASVAETASKSIAELQIAAEDSESSKEDVVDEEAEKESDDESDAAPLRKSALDKLEKASEDSLLSQGLKVFDNSVETFASGAWSALGNAWRGGSELVHKLENSASNLGGSVPHDGPGTPGSNAPSLLETGKAFTAKGMQVLEYVGKETMDLLISETGIEIEKARKEGDDQSDEDQLSEEVTFDRCFYIYGGPEQLEELEALSSHYALLFNRRKAKLSAEQKSAFDGKLKEVQQIFDLSNEIDAGADSNKGKTIKKGNAGSGDEIKNLHDASVGKAAEMAAGFTNALAGLAANDIIQRTTGRLDSLHSEGVHRLSEMCCFAVSQLLTFGKSIISLANKTEDEEVDDDKANIEWPEDVSAKAKIIRINAQTMIGYLEAVSNSFTTGISDVTEAYQAAIKGVTAESPTVVPKKTSVQDKASAFSEHLRADQITAISKIQDGVQFLAHVILSTSMNAA*