AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1216700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216700 MtrunA17_Chr4g0066381 97.056 951 20 3 1 951 1 943 0.0 1900
Msa1216700 MtrunA17_Chr4g0066391 89.965 568 57 0 76 643 9 576 0.0 1076
Msa1216700 MtrunA17_Chr4g0066401 91.438 292 25 0 657 948 1 292 0.0 559
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216700 AT4G15530.1 80.286 908 171 3 48 948 46 952 0.0 1529
Msa1216700 AT4G15530.4 80.286 908 171 3 48 948 46 952 0.0 1529
Msa1216700 AT4G15530.6 80.286 908 171 3 48 948 53 959 0.0 1528
Msa1216700 AT4G15530.5 80.286 908 171 3 48 948 53 959 0.0 1528
Msa1216700 AT4G15530.2 82.644 870 150 1 79 948 3 871 0.0 1519
Msa1216700 AT4G15530.7 82.670 854 147 1 95 948 1 853 0.0 1490
Msa1216700 AT4G15530.3 82.670 854 147 1 95 948 1 853 0.0 1490

Find 267 sgRNAs with CRISPR-Local

Find 573 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATGGTGTTTGGTAATA+TGG 0.138638 8_1:+78614368 Msa1216700:CDS
TTCATTGTTTGAGGAGAAAT+TGG 0.182551 8_1:+78614001 Msa1216700:CDS
GCTAATTCTAGTTGCTTCTT+TGG 0.182850 8_1:-78614246 None:intergenic
TGAGTTGACCCACACCTTTC+TGG 0.196040 8_1:-78618650 None:intergenic
TGGTAAGTTACCTTCAAATT+TGG 0.225158 8_1:-78618708 None:intergenic
AACAACTGCCATTTCGATTT+CGG 0.232565 8_1:+78610413 Msa1216700:five_prime_UTR
TTGTGGTGGGTGGTGTTGTT+GGG 0.235923 8_1:-78610676 None:intergenic
ACTGGGGAAAAGAAACTTTA+TGG 0.240216 8_1:+78614435 Msa1216700:CDS
TGATGATAGGTGGTTGTAAT+TGG 0.242997 8_1:+78616373 Msa1216700:intron
ACAACTGCCATTTCGATTTC+GGG 0.257914 8_1:+78610414 Msa1216700:five_prime_UTR
TAACAAGAGAAACAAGTATT+TGG 0.276377 8_1:-78619610 None:intergenic
TTGCATGCCGGATGCTTATA+AGG 0.282445 8_1:+78614699 Msa1216700:CDS
GACATCAAGTGAGTTTAATA+AGG 0.284688 8_1:+78617934 Msa1216700:CDS
ACTTTGTCCTTGTACTTAGA+TGG 0.289385 8_1:-78615394 None:intergenic
TTTGTGGTGGGTGGTGTTGT+TGG 0.294486 8_1:-78610677 None:intergenic
CACCATGGATTGAATGTTTA+CGG 0.295707 8_1:-78614355 None:intergenic
ATACCGTGTCTTGGTGTATT+TGG 0.297849 8_1:+78619416 Msa1216700:three_prime_UTR
TATGACTATGCCTCTTACTA+TGG 0.300775 8_1:-78610474 None:intergenic
TACTGTAACCAAATGTCATT+TGG 0.303402 8_1:-78618231 None:intergenic
AATGAAATGGAGGCCTTTCT+TGG 0.307194 8_1:+78612929 Msa1216700:CDS
TTCATGGTCTCTAAATCTTC+AGG 0.312014 8_1:-78614673 None:intergenic
GATTTCGGGAAGTTTCTCTT+TGG 0.314849 8_1:+78610428 Msa1216700:five_prime_UTR
CTCATTCTTAATTCACTTCA+TGG 0.315644 8_1:-78619585 None:intergenic
ATGTCTCATGTTCACCATTC+AGG 0.321813 8_1:+78618911 Msa1216700:CDS
ATACAGAGAGTGTTCACTTT+TGG 0.324769 8_1:+78612551 Msa1216700:intron
ACACATCAACATCAGATAAT+AGG 0.326515 8_1:+78610501 Msa1216700:CDS
ATTTGGGAACTTTCATGTCT+TGG 0.328110 8_1:+78616497 Msa1216700:CDS
TGTCTTGGGCTGATGAAATA+AGG 0.330420 8_1:+78616512 Msa1216700:CDS
ATGGACACAGTTCTTAATCT+TGG 0.333394 8_1:+78613692 Msa1216700:CDS
GGTAATATGGGAAATACTTC+AGG 0.336156 8_1:+78614381 Msa1216700:CDS
TCTAACAACCGGATTGTTAC+TGG 0.340369 8_1:-78617025 None:intergenic
GGGCTCTTCATTAAGCTATA+AGG 0.343387 8_1:+78617986 Msa1216700:CDS
CTAGCTGCTATTGCATCTTC+AGG 0.343456 8_1:-78616663 None:intergenic
TCCGGCTCTAAGCGATGATT+TGG 0.347002 8_1:+78616480 Msa1216700:CDS
TTTGGGAACTTTCATGTCTT+GGG 0.348932 8_1:+78616498 Msa1216700:CDS
CAAAACGGTGCGCAAGGAAT+TGG 0.349390 8_1:+78616687 Msa1216700:CDS
GGATATTGAGTTCACTGTTC+AGG 0.351127 8_1:+78614883 Msa1216700:intron
ATCTTCAGGTGTCCTGATTC+CGG 0.351942 8_1:-78614659 None:intergenic
ACTGGTTTGCCTGCATCCCC+TGG 0.352559 8_1:+78615424 Msa1216700:CDS
AGACGTTTCTTAGACATGTT+TGG 0.353523 8_1:+78613782 Msa1216700:CDS
GCATCCCCTGGAGCTGCAGT+TGG 0.361008 8_1:+78615436 Msa1216700:CDS
TGGGGAAAGTGTTGTGTGTC+TGG 0.364893 8_1:+78616238 Msa1216700:CDS
CCCTGGAGCTGCAGTTGGGC+AGG 0.365744 8_1:+78615441 Msa1216700:CDS
TACAGTCCTTCCAGAGATAA+TGG 0.367046 8_1:+78617623 Msa1216700:CDS
GCCTGCATCTCAGTCAATTC+AGG 0.371622 8_1:-78617555 None:intergenic
TGCTTCAGATGAAAGGATAA+AGG 0.371733 8_1:+78616886 Msa1216700:CDS
TCAAATTATTGACAAATATG+AGG 0.372430 8_1:-78610341 None:intergenic
CGCAAGGAATTGGACTTTGC+AGG 0.375720 8_1:+78616697 Msa1216700:CDS
GACCTTACCCAAATGACATT+TGG 0.377792 8_1:+78618223 Msa1216700:CDS
AGGAGCATTAATCAGATAAC+TGG 0.379456 8_1:+78614318 Msa1216700:CDS
AGGATGTAGTTGCCGGAATC+AGG 0.380829 8_1:+78614647 Msa1216700:CDS
TAGATTTGTTGAAAATGAAA+TGG 0.382138 8_1:+78612916 Msa1216700:CDS
CTCCTATACTTATTAGCCCT+TGG 0.384153 8_1:-78614300 None:intergenic
AATACTTACCAAGGACTTCA+TGG 0.385011 8_1:-78612600 None:intergenic
CATCAAAATTTGCACAGAAA+AGG 0.387242 8_1:+78618671 Msa1216700:CDS
AGACAAGTCCAGAGGATGTC+GGG 0.387286 8_1:+78616140 Msa1216700:CDS
GATGATAGGTGGTTGTAATT+GGG 0.390892 8_1:+78616374 Msa1216700:intron
ATTTCATTTAAATCACCTTC+AGG 0.399860 8_1:-78617070 None:intergenic
ACCTGCCCAACTGCAGCTCC+AGG 0.399930 8_1:-78615442 None:intergenic
AACATTCAATCCATGGTGTT+TGG 0.400061 8_1:+78614360 Msa1216700:CDS
GGGAGCCAACTTAGCAGAAA+TGG 0.403069 8_1:+78612775 Msa1216700:CDS
GTTGCATTCTTTGCTCAACT+TGG 0.406680 8_1:+78618880 Msa1216700:CDS
ATTTCGGGAAGTTTCTCTTT+GGG 0.413618 8_1:+78610429 Msa1216700:five_prime_UTR
CTCCTCCTCTCTGTGCGCTC+TGG 0.414979 8_1:+78612968 Msa1216700:CDS
TCCATGGTGTTTGGTAATAT+GGG 0.415863 8_1:+78614369 Msa1216700:CDS
TCCTATACTTATTAGCCCTT+GGG 0.421836 8_1:-78614299 None:intergenic
ATCAAAATTTGCACAGAAAA+GGG 0.422930 8_1:+78618672 Msa1216700:CDS
GGTTCCAAATGAAAAGAAAT+CGG 0.423220 8_1:-78618197 None:intergenic
TGTTGCCATTTCTGCTAAGT+TGG 0.425651 8_1:-78612780 None:intergenic
TTAGCAGAAATGGCAACAAT+TGG 0.428853 8_1:+78612785 Msa1216700:CDS
TTGAATGATGAAGTGGTTGC+TGG 0.429675 8_1:+78613716 Msa1216700:CDS
ACTATGGAACTAACCTCAAA+TGG 0.430135 8_1:-78618313 None:intergenic
CATCCCCTGGAGCTGCAGTT+GGG 0.430253 8_1:+78615437 Msa1216700:CDS
ATCTCCTCCCACAAACCATT+TGG 0.430655 8_1:-78612881 None:intergenic
GGCCGTGAGAATGATGATAT+TGG 0.430946 8_1:+78616907 Msa1216700:CDS
TGTGGTGGGTGGTGTTGTTG+GGG 0.432668 8_1:-78610675 None:intergenic
CATTCCACATTCATTGTTTG+AGG 0.433554 8_1:+78613992 Msa1216700:CDS
CTGCTGTTGTAGCCCGTGGA+TGG 0.437327 8_1:+78616218 Msa1216700:CDS
GATTTCCATGCCTGGAATGA+TGG 0.438634 8_1:+78613673 Msa1216700:intron
TGCTGCTAAACCAAATTTGA+AGG 0.439110 8_1:+78618698 Msa1216700:CDS
TCCTTGTGCATGCCATTGTT+CGG 0.441556 8_1:-78615485 None:intergenic
TCCACAGGTGAGGTGATACT+TGG 0.444321 8_1:+78616439 Msa1216700:CDS
ATGGGAAATACTTCAGGAAC+TGG 0.445089 8_1:+78614387 Msa1216700:CDS
TTCACTAGAAATCCAAGCAC+TGG 0.446965 8_1:+78614417 Msa1216700:CDS
ACTGGTGTGGAATTATATAT+AGG 0.448324 8_1:+78619449 Msa1216700:three_prime_UTR
ACTGTAACCAAATGTCATTT+GGG 0.448913 8_1:-78618230 None:intergenic
TTAATTGTAGTTGGGAGGAA+AGG 0.450313 8_1:+78612754 Msa1216700:intron
ACTGCAGCTCCAGGGGATGC+AGG 0.452972 8_1:-78615433 None:intergenic
TCACTTCATGGACCCATGTT+CGG 0.453536 8_1:-78619573 None:intergenic
TCAAAATCTGATCTTTGATA+AGG 0.453983 8_1:-78616974 None:intergenic
CTGGGGAAAAGAAACTTTAT+GGG 0.455760 8_1:+78614436 Msa1216700:CDS
GGAGTTTCTCATTAATGCTC+AGG 0.458500 8_1:+78614458 Msa1216700:CDS
TGATGAAGTGGTTGCTGGGT+TGG 0.459454 8_1:+78613721 Msa1216700:CDS
ATGAAATGGAGGCCTTTCTT+GGG 0.459941 8_1:+78612930 Msa1216700:CDS
TAGGGAGAGGATGTAGTTGC+CGG 0.460223 8_1:+78614640 Msa1216700:intron
GAATATGTGGAGAGCATGGC+GGG 0.461451 8_1:+78618845 Msa1216700:CDS
CTTCATGAATTTCTTCCTGA+AGG 0.463137 8_1:+78617055 Msa1216700:CDS
ATTGGTTTATCTGTGCCTCC+TGG 0.464909 8_1:+78612803 Msa1216700:CDS
GAGTGTCTACCTCGAAGCTA+AGG 0.466406 8_1:+78614106 Msa1216700:CDS
TTGTTGGGGTAAGAATAGTT+TGG 0.470925 8_1:-78610661 None:intergenic
GAGATGTCTACCATAGTAAG+AGG 0.473678 8_1:+78610464 Msa1216700:exon
GATTATCAGGTTGGAATATG+TGG 0.476611 8_1:+78618832 Msa1216700:intron
CCGGCTCTAAGCGATGATTT+GGG 0.476985 8_1:+78616481 Msa1216700:CDS
TGAGAAAGTGTTCTCTGAGA+TGG 0.479729 8_1:+78617965 Msa1216700:CDS
TTTGAAGTTAATCCAATGCT+TGG 0.479778 8_1:+78617160 Msa1216700:CDS
CCAAATAAACGACCATGAAA+AGG 0.480759 8_1:+78616273 Msa1216700:CDS
TCCTGAATTGACTGAGATGC+AGG 0.481091 8_1:+78617554 Msa1216700:CDS
TGCTGTTGTAGCCCGTGGAT+GGG 0.481959 8_1:+78616219 Msa1216700:CDS
CGAATTAATTGATCCGAACA+TGG 0.482087 8_1:+78619560 Msa1216700:three_prime_UTR
AGAACTGTGTCCATCATTCC+AGG 0.483639 8_1:-78613683 None:intergenic
AAGAATGATGTTAGTGTTGG+TGG 0.484081 8_1:+78610539 Msa1216700:CDS
ATAGTTTGGCAACGAATTGA+AGG 0.484320 8_1:-78610647 None:intergenic
TCAAGTTCCTTATAAGCATC+CGG 0.489294 8_1:-78614706 None:intergenic
TTGTGGGAGGAGATACTTGA+AGG 0.489564 8_1:+78612890 Msa1216700:CDS
GGTGATTTAAATGAAATTGT+TGG 0.491174 8_1:+78617076 Msa1216700:CDS
AGTGGAAAACGTACTGGTAA+AGG 0.492046 8_1:+78614935 Msa1216700:CDS
TTGATAGAAAATAAAGCAAA+GGG 0.493644 8_1:+78619260 Msa1216700:three_prime_UTR
CTGCCCAACTGCAGCTCCAG+GGG 0.494906 8_1:-78615440 None:intergenic
ACGAGTGGAACCATTATCTC+TGG 0.495754 8_1:-78617633 None:intergenic
AGTGGAAGGAGTTGCAGTTA+CGG 0.497327 8_1:+78610582 Msa1216700:CDS
AGAACCTACCAAATGGTTTG+TGG 0.497544 8_1:+78612873 Msa1216700:CDS
AACCAGATCTTTGAGATCGT+TGG 0.499844 8_1:-78614072 None:intergenic
GAAAAGCTAAAGTATTCAAA+AGG 0.499944 8_1:+78614023 Msa1216700:CDS
GAAACTTCCCGAAATCGAAA+TGG 0.500543 8_1:-78610421 None:intergenic
TAATTGTAGTTGGGAGGAAA+GGG 0.500634 8_1:+78612755 Msa1216700:intron
AGCCAACGATCTCAAAGATC+TGG 0.501318 8_1:+78614070 Msa1216700:CDS
TGAGGTGATACTTGGAAAGC+AGG 0.501601 8_1:+78616447 Msa1216700:CDS
ACGTAATATCAGAAGGAGAA+TGG 0.502501 8_1:+78616401 Msa1216700:CDS
AATCAAAATAGCTGTAGATA+TGG 0.503273 8_1:+78614961 Msa1216700:CDS
TAGTAAGAGGCATAGTCATA+AGG 0.503418 8_1:+78610477 Msa1216700:CDS
GCAAAGAATGCAACAGAAGA+AGG 0.504771 8_1:-78618871 None:intergenic
GGAGAATGGATCTCGTTGAA+TGG 0.505652 8_1:+78616415 Msa1216700:CDS
GAACCTACCAAATGGTTTGT+GGG 0.508102 8_1:+78612874 Msa1216700:CDS
TCCACTCGTCGGTACACCTC+AGG 0.509274 8_1:+78617647 Msa1216700:CDS
TTTGCAGCATGATCCATTTG+AGG 0.509567 8_1:+78618300 Msa1216700:CDS
CTTCCTACATACCTATCCGC+AGG 0.510814 8_1:+78618274 Msa1216700:CDS
TATTAGACTGTTTCTGTCAA+GGG 0.511048 8_1:+78619125 Msa1216700:three_prime_UTR
TCTGCAACTAGTGCAGCTCT+TGG 0.512618 8_1:-78618029 None:intergenic
CACAACACTTTCCCCATCCA+CGG 0.517943 8_1:-78616231 None:intergenic
AGCAGCTTGGAAAACGGCAC+GGG 0.518749 8_1:-78617577 None:intergenic
CTAACAACCGGATTGTTACT+GGG 0.520228 8_1:-78617024 None:intergenic
TCAATTCTTGGGATAGCCCA+AGG 0.520836 8_1:+78614283 Msa1216700:CDS
TGAATGATGAAGTGGTTGCT+GGG 0.521032 8_1:+78613717 Msa1216700:CDS
TTTGATTGCATACCGTGTCT+TGG 0.522782 8_1:+78619407 Msa1216700:three_prime_UTR
CACCAGAGCGCACAGAGAGG+AGG 0.524479 8_1:-78612970 None:intergenic
CTGCTGAAGCTGCCGAACAA+TGG 0.524989 8_1:+78615473 Msa1216700:CDS
ATATATCAGATTTCCATGCC+TGG 0.525782 8_1:+78613665 Msa1216700:intron
TGTCATTTGGGTAAGGTCGT+TGG 0.526879 8_1:-78618218 None:intergenic
CTCTGTGCGCTCTGGTGCTG+CGG 0.527367 8_1:+78612976 Msa1216700:CDS
TTATTAGACTGTTTCTGTCA+AGG 0.528019 8_1:+78619124 Msa1216700:three_prime_UTR
ATGGTCGTTTATTTGGATGT+CGG 0.530373 8_1:-78616266 None:intergenic
TGAAATAGCAGCTTGGAAAA+CGG 0.532518 8_1:-78617583 None:intergenic
AATGAAAAGAACCTACCAAA+TGG 0.534270 8_1:+78612866 Msa1216700:CDS
GAAGTGGAGGATCTAACAAC+CGG 0.535317 8_1:-78617036 None:intergenic
AAAGCAGGCACTTTCTCCTC+CGG 0.536936 8_1:+78616462 Msa1216700:CDS
ATCTCGTTGAATGGATCCAC+AGG 0.538595 8_1:+78616424 Msa1216700:CDS
AAACAAGGCCATGAAGTCCT+TGG 0.538622 8_1:+78612592 Msa1216700:CDS
AAGGACAAAGTGGTTGCCAC+TGG 0.539776 8_1:+78615406 Msa1216700:CDS
GAGAAAGTGTTCTCTGAGAT+GGG 0.540276 8_1:+78617966 Msa1216700:CDS
GCAGCTCAATTTGCAGCGTA+AGG 0.540463 8_1:+78619096 Msa1216700:CDS
CCCAAATCATCGCTTAGAGC+CGG 0.541613 8_1:-78616481 None:intergenic
GCCCAAGGGCTAATAAGTAT+AGG 0.543811 8_1:+78614298 Msa1216700:CDS
AACCAAATGTCATTTGGGTA+AGG 0.544430 8_1:-78618225 None:intergenic
AGCTGTAGATATGGTCAATG+AGG 0.545269 8_1:+78614970 Msa1216700:CDS
CGTTTCTTAGACATGTTTGG+AGG 0.547428 8_1:+78613785 Msa1216700:CDS
CAGCCACGAAAACCAAGCAT+TGG 0.550440 8_1:-78617172 None:intergenic
GAATCATTACAAGGATATGA+TGG 0.551273 8_1:+78614750 Msa1216700:CDS
CCTGCCCAACTGCAGCTCCA+GGG 0.551694 8_1:-78615441 None:intergenic
TATTCGTTCTGCAATCAAGA+TGG 0.555466 8_1:+78615003 Msa1216700:CDS
GCAATAGCAGCTAGACAAAA+CGG 0.556137 8_1:+78616672 Msa1216700:CDS
TAATCAGATAACTGGACTAG+TGG 0.556974 8_1:+78614326 Msa1216700:CDS
AGCCAATATCATCATTCTCA+CGG 0.557183 8_1:-78616909 None:intergenic
AGCTGCACTAGTTGCAGATG+AGG 0.560078 8_1:+78618034 Msa1216700:CDS
ATGGTCTCCCAGTAACAATC+CGG 0.560105 8_1:+78617017 Msa1216700:CDS
ATTATTGACAAATATGAGGC+GGG 0.561380 8_1:-78610337 None:intergenic
TGTCGAAGTGGAAAACGTAC+TGG 0.564174 8_1:+78614929 Msa1216700:CDS
AAGAAGAAGAAATAGTCTCT+AGG 0.566694 8_1:+78617125 Msa1216700:CDS
TTCTCCTCAAACAATGAATG+TGG 0.568420 8_1:-78613996 None:intergenic
GCTGTTGTAGCCCGTGGATG+GGG 0.568721 8_1:+78616220 Msa1216700:CDS
CTTGATAGAAAATAAAGCAA+AGG 0.569774 8_1:+78619259 Msa1216700:three_prime_UTR
TGCCGTAAACATTCAATCCA+TGG 0.569861 8_1:+78614353 Msa1216700:CDS
GCTGCTGCAAGTCTAGCAAT+CGG 0.570121 8_1:-78619078 None:intergenic
ATTTGTTGAAAATGAAATGG+AGG 0.571551 8_1:+78612919 Msa1216700:CDS
TTTGGCAAAGGTAAAAGTGA+AGG 0.573553 8_1:+78612569 Msa1216700:CDS
TCACTAGAAATCCAAGCACT+GGG 0.573756 8_1:+78614418 Msa1216700:CDS
TCATACTAATCTGACCTGAA+TGG 0.573986 8_1:-78618925 None:intergenic
TGTGTCCATCATTCCAGGCA+TGG 0.575045 8_1:-78613678 None:intergenic
GACCATGAAAACTTGCATGC+CGG 0.575358 8_1:+78614687 Msa1216700:CDS
AAGGGAGAAAAGTTTCCCTC+AGG 0.576363 8_1:+78614125 Msa1216700:CDS
ATGATAGGTGGTTGTAATTG+GGG 0.576454 8_1:+78616375 Msa1216700:intron
GCTAGACAAAACGGTGCGCA+AGG 0.576960 8_1:+78616681 Msa1216700:CDS
GAGATAATGGTTCCACTCGT+CGG 0.577658 8_1:+78617636 Msa1216700:CDS
TCAGGAAGAAATTCATGAAG+TGG 0.578057 8_1:-78617052 None:intergenic
TCTGTTGATATAGTGAGTCC+AGG 0.580190 8_1:-78612821 None:intergenic
ATCCCTGCGGATAGGTATGT+AGG 0.580219 8_1:-78618277 None:intergenic
GCTGCAAAATCCCTGCGGAT+AGG 0.585813 8_1:-78618285 None:intergenic
TCTTCATTAAGCTATAAGGT+TGG 0.586617 8_1:+78617990 Msa1216700:CDS
AAGTACAAAGGTGCAGTGGA+AGG 0.586751 8_1:+78610568 Msa1216700:CDS
AATTATTGACAAATATGAGG+CGG 0.587282 8_1:-78610338 None:intergenic
TCCAAGTATCACCTCACCTG+TGG 0.588151 8_1:-78616440 None:intergenic
CTGTTCAGGAAAATAGATTG+TGG 0.588451 8_1:+78614897 Msa1216700:CDS
GCTGTAGATATGGTCAATGA+GGG 0.588831 8_1:+78614971 Msa1216700:CDS
AGGTAAAAGTGAAGGAAACA+AGG 0.590908 8_1:+78612577 Msa1216700:CDS
CATGCTGCTGTTGTAGCCCG+TGG 0.591629 8_1:+78616214 Msa1216700:CDS
GCTATTTCAGTGAGTAGCCA+TGG 0.591843 8_1:+78617597 Msa1216700:CDS
GGTGAACTAACTTCTCAGAC+AGG 0.596053 8_1:+78617097 Msa1216700:CDS
GAATTAATTGATCCGAACAT+GGG 0.597406 8_1:+78619561 Msa1216700:three_prime_UTR
AGTGTCTACCTCGAAGCTAA+GGG 0.598429 8_1:+78614107 Msa1216700:CDS
GAAGAAGTACAAAGGTGCAG+TGG 0.598582 8_1:+78610564 Msa1216700:CDS
GATTCTAGAGAATCATTACA+AGG 0.598884 8_1:+78614741 Msa1216700:CDS
CAATTCTTGGGATAGCCCAA+GGG 0.599592 8_1:+78614284 Msa1216700:CDS
GTTGGAATATGTGGAGAGCA+TGG 0.600312 8_1:+78618841 Msa1216700:CDS
CCTCCCACAAACCATTTGGT+AGG 0.601228 8_1:-78612877 None:intergenic
GGGGATAACGTAATATCAGA+AGG 0.601928 8_1:+78616394 Msa1216700:CDS
TCCCATATTACCAAACACCA+TGG 0.602032 8_1:-78614370 None:intergenic
GAGCGCACAGAGAGGAGGAG+AGG 0.602197 8_1:-78612965 None:intergenic
GCCGAACAATGGCATGCACA+AGG 0.602710 8_1:+78615484 Msa1216700:CDS
AACAAGAATGATGTTAGTGT+TGG 0.604067 8_1:+78610536 Msa1216700:CDS
TCTTGGATTGAATGATGAAG+TGG 0.606505 8_1:+78613709 Msa1216700:CDS
ATATAAAGTCTGATAAAGCA+AGG 0.608659 8_1:+78619225 Msa1216700:three_prime_UTR
TCAATTTGCAGCGTAAGGAA+CGG 0.609021 8_1:+78619101 Msa1216700:exon
TGATCAGCTCCTACACCCAC+AGG 0.609765 8_1:+78615042 Msa1216700:CDS
TACTCACTGAAATAGCAGCT+TGG 0.609929 8_1:-78617590 None:intergenic
ATCTAAGTACAAGGACAAAG+TGG 0.610286 8_1:+78615396 Msa1216700:CDS
GAGACAAGTCCAGAGGATGT+CGG 0.612900 8_1:+78616139 Msa1216700:CDS
GTGTGTTAATTGTAGTTGGG+AGG 0.613934 8_1:+78612749 Msa1216700:intron
AATCAGATAACTGGACTAGT+GGG 0.613941 8_1:+78614327 Msa1216700:CDS
GGAAGAAATTCATGAAGTGG+AGG 0.614194 8_1:-78617049 None:intergenic
GTGGAACCATTATCTCTGGA+AGG 0.614560 8_1:-78617629 None:intergenic
TGAGGATCCATCTAAGTACA+AGG 0.615147 8_1:+78615387 Msa1216700:CDS
ACAACACTTTCCCCATCCAC+GGG 0.616402 8_1:-78616230 None:intergenic
AAGCATATACCTGTGGGTGT+AGG 0.618227 8_1:-78615051 None:intergenic
CTGCAGGTACTTGACCAGAA+AGG 0.619999 8_1:+78618636 Msa1216700:intron
TAGCAGCTTGGAAAACGGCA+CGG 0.620165 8_1:-78617578 None:intergenic
AGGAGCTGATCAAGATGTTG+TGG 0.628878 8_1:-78615031 None:intergenic
TTCCTACATACCTATCCGCA+GGG 0.630523 8_1:+78618275 Msa1216700:CDS
GGATGCTTATAAGGAACTTG+AGG 0.631062 8_1:+78614708 Msa1216700:CDS
GTATTTGGTGTATAAGACAC+TGG 0.631881 8_1:+78619431 Msa1216700:three_prime_UTR
GTTGGCATCTTGACAGCTAG+AGG 0.632776 8_1:+78616178 Msa1216700:CDS
GGTACTTGACCAGAAAGGTG+TGG 0.634510 8_1:+78618641 Msa1216700:intron
GTACTTGACCAGAAAGGTGT+GGG 0.637870 8_1:+78618642 Msa1216700:CDS
AGAATGATGTTAGTGTTGGT+GGG 0.642242 8_1:+78610540 Msa1216700:CDS
AGGGGATGCAGGCAAACCAG+TGG 0.643058 8_1:-78615422 None:intergenic
ACTTTGCAGGACAGAACACA+TGG 0.645120 8_1:+78616710 Msa1216700:CDS
TGATGAAATAAGGAATCTGA+AGG 0.648348 8_1:+78616522 Msa1216700:CDS
GGAATATGTGGAGAGCATGG+CGG 0.649381 8_1:+78618844 Msa1216700:CDS
CTGGAAGGACTGTAATACCA+TGG 0.650829 8_1:-78617614 None:intergenic
AAATCATCGCTTAGAGCCGG+AGG 0.654508 8_1:-78616478 None:intergenic
CAGCACCAGAGCGCACAGAG+AGG 0.669098 8_1:-78612973 None:intergenic
GGCATCTTGACAGCTAGAGG+TGG 0.670250 8_1:+78616181 Msa1216700:CDS
AAGGACAGAGACAAGTCCAG+AGG 0.685240 8_1:+78616132 Msa1216700:CDS
TGGCTATTACGCAAGAACAG+AGG 0.687603 8_1:+78616927 Msa1216700:CDS
GTTGAATGGATCCACAGGTG+AGG 0.695332 8_1:+78616429 Msa1216700:CDS
TGGATGTTGCAATGTCGAAG+TGG 0.695711 8_1:+78614917 Msa1216700:CDS
ATTCGAACAAAGATAATACG+TGG 0.698208 8_1:-78619542 None:intergenic
CTGTAGATATGGTCAATGAG+GGG 0.699069 8_1:+78614972 Msa1216700:CDS
CCTACCAAATGGTTTGTGGG+AGG 0.699192 8_1:+78612877 Msa1216700:CDS
AATATGTGGAGAGCATGGCG+GGG 0.702583 8_1:+78618846 Msa1216700:CDS
TGGTGGGAGAAGAAGTACAA+AGG 0.710183 8_1:+78610556 Msa1216700:CDS
ACAAGTCCAGAGGATGTCGG+GGG 0.714831 8_1:+78616142 Msa1216700:CDS
CACTAGAAATCCAAGCACTG+GGG 0.715102 8_1:+78614419 Msa1216700:CDS
TGGGGAAAAGAAACTTTATG+GGG 0.717321 8_1:+78614437 Msa1216700:CDS
ACACCAAATACACCAAGACA+CGG 0.726623 8_1:-78619419 None:intergenic
GTTGATATAGTGAGTCCAGG+AGG 0.729602 8_1:-78612818 None:intergenic
AGTTACGGCTTACATCAACA+TGG 0.736612 8_1:+78610597 Msa1216700:CDS
TGGTGTATAAGACACTGGTG+TGG 0.743788 8_1:+78619436 Msa1216700:three_prime_UTR
ATCATGCTGCAAAATCCCTG+CGG 0.765148 8_1:-78618290 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAAACATTAAAAATTA+AGG - chr8_1:78610781-78610800 None:intergenic 10.0%
!!! TAAAAAAAAAACTTTTTTTG+AGG - chr8_1:78610806-78610825 None:intergenic 10.0%
!! GAAAATAAAATAAAAAACAA+AGG + chr8_1:78611537-78611556 Msa1216700:intron 10.0%
!! AAATAAAATAAAAAACAAAG+GGG + chr8_1:78611539-78611558 Msa1216700:intron 10.0%
!!! TTTTAATAGAGTTTTTTTTT+TGG + chr8_1:78612488-78612507 Msa1216700:intron 10.0%
!!! ATTAAATTTGATTCTTTTTT+TGG + chr8_1:78613560-78613579 Msa1216700:intron 10.0%
!! CATTAATAAAAAAAAAATGA+AGG + chr8_1:78619199-78619218 Msa1216700:three_prime_UTR 10.0%
!! AAAAACAAAAGATAAGATAA+AGG - chr8_1:78610720-78610739 None:intergenic 15.0%
!!! TTTTTCAATAATAAATTCTC+TGG + chr8_1:78610735-78610754 Msa1216700:intron 15.0%
!! AATAATCATTCTTAATTAGA+CGG - chr8_1:78611073-78611092 None:intergenic 15.0%
!!! AAAAGTTCCATTTTATTTAT+AGG + chr8_1:78613523-78613542 Msa1216700:intron 15.0%
!! AATTACACCTATAAATAAAA+TGG - chr8_1:78613533-78613552 None:intergenic 15.0%
!! TATATATAAGAAAAGTTTCA+TGG - chr8_1:78613948-78613967 None:intergenic 15.0%
!! TATATGTTAAATTTAGGTAT+TGG + chr8_1:78613968-78613987 Msa1216700:intron 15.0%
!! TCTACAAAATTGTTTATAAT+AGG + chr8_1:78614621-78614640 Msa1216700:intron 15.0%
!! CTACAAAATTGTTTATAATA+GGG + chr8_1:78614622-78614641 Msa1216700:intron 15.0%
!! TATTTGCAAAAGAAATTTAA+AGG - chr8_1:78615109-78615128 None:intergenic 15.0%
!! TCTGAAAAGTTAATTATAAA+AGG + chr8_1:78615176-78615195 Msa1216700:intron 15.0%
!!! AATGATGTTATTTGATTATA+CGG - chr8_1:78615215-78615234 None:intergenic 15.0%
!!! ACTTGTATTGTATATTTTAT+TGG - chr8_1:78615937-78615956 None:intergenic 15.0%
!! AAAATTATGAATGCATTAAA+AGG + chr8_1:78616767-78616786 Msa1216700:intron 15.0%
!! ATTGCTATAAATTATAAACT+TGG - chr8_1:78617278-78617297 None:intergenic 15.0%
!!! ATTTTTTAATTGAAAATCGT+TGG - chr8_1:78617460-78617479 None:intergenic 15.0%
!!! AAATATTGTACATGTTTTAT+TGG + chr8_1:78619490-78619509 Msa1216700:three_prime_UTR 15.0%
!! TCAAATTATTGACAAATATG+AGG - chr8_1:78610344-78610363 None:intergenic 20.0%
!! AAATTAAGGATGTTAAAGAA+AGG - chr8_1:78610767-78610786 None:intergenic 20.0%
!! TATTTCATTACTCATTTCTA+GGG - chr8_1:78611473-78611492 None:intergenic 20.0%
!! TTATTTCATTACTCATTTCT+AGG - chr8_1:78611474-78611493 None:intergenic 20.0%
!!! AGAAAAATCAAACATTGATT+AGG + chr8_1:78611511-78611530 Msa1216700:intron 20.0%
!! CTTAGCTTACAATAAATAAA+TGG - chr8_1:78611565-78611584 None:intergenic 20.0%
!! TTTATTTATTGTAAGCTAAG+TGG + chr8_1:78611565-78611584 Msa1216700:intron 20.0%
!! AACATGTTATGTTAAATGAA+AGG - chr8_1:78611591-78611610 None:intergenic 20.0%
!!! AATAGGGTATTTATTTAACA+TGG - chr8_1:78611665-78611684 None:intergenic 20.0%
!! GAAAACTTCAAATGAAAAAT+AGG + chr8_1:78611885-78611904 Msa1216700:intron 20.0%
!! TTATATAGCTTCTCATAAAA+AGG + chr8_1:78611909-78611928 Msa1216700:intron 20.0%
!!! TCTATCATCATGAATTTTAT+TGG + chr8_1:78611950-78611969 Msa1216700:intron 20.0%
!! GTTAATTCAGAACTAATATA+AGG - chr8_1:78612221-78612240 None:intergenic 20.0%
!!! TTTTGAAAAGTATCAACTAA+GGG - chr8_1:78612276-78612295 None:intergenic 20.0%
!!! TTTTTGAAAAGTATCAACTA+AGG - chr8_1:78612277-78612296 None:intergenic 20.0%
!! AAGTTATAAAAGAGTTGTAA+GGG + chr8_1:78612426-78612445 Msa1216700:intron 20.0%
!!! ATTAAAAGTGACAATACTTT+TGG - chr8_1:78612475-78612494 None:intergenic 20.0%
!!! TTTCATTTTCAACAAATCTA+AGG - chr8_1:78612916-78612935 None:intergenic 20.0%
!!! TAGATTTGTTGAAAATGAAA+TGG + chr8_1:78612916-78612935 Msa1216700:CDS 20.0%
!! TATCTAAATTCATAACCATT+TGG + chr8_1:78613073-78613092 Msa1216700:intron 20.0%
!!! TAATTCAACATTCTTTTTTG+AGG + chr8_1:78613585-78613604 Msa1216700:intron 20.0%
!!! AATTCAACATTCTTTTTTGA+GGG + chr8_1:78613586-78613605 Msa1216700:intron 20.0%
!! AAAACTAATAGATATGACAA+TGG - chr8_1:78614532-78614551 None:intergenic 20.0%
!!! AATAGATTACTATTTCCTTT+TGG + chr8_1:78614588-78614607 Msa1216700:intron 20.0%
!! AACAGTAAAACAAATCTAAA+GGG - chr8_1:78614789-78614808 None:intergenic 20.0%
!! AAACAGTAAAACAAATCTAA+AGG - chr8_1:78614790-78614809 None:intergenic 20.0%
!! TATATTATATACGATGTTGT+AGG + chr8_1:78614862-78614881 Msa1216700:intron 20.0%
!! AATAACATCATTTAGCTAAA+TGG + chr8_1:78615223-78615242 Msa1216700:intron 20.0%
!!! AAGTTTATTTGTTTAGTTTG+AGG + chr8_1:78615369-78615388 Msa1216700:intron 20.0%
!! TAACGATATAATGAAATGAA+GGG - chr8_1:78615573-78615592 None:intergenic 20.0%
!! TAGTCATGAAATTAAATCTA+GGG - chr8_1:78616046-78616065 None:intergenic 20.0%
!! TAGAATTTAATGATTCCTTA+TGG - chr8_1:78616084-78616103 None:intergenic 20.0%
!! TAATATCCATTTATGATGAT+AGG + chr8_1:78616360-78616379 Msa1216700:intron 20.0%
!! ATAATTTATAGCAATTCAGT+AGG + chr8_1:78617283-78617302 Msa1216700:intron 20.0%
!! TAATTTATAGCAATTCAGTA+GGG + chr8_1:78617284-78617303 Msa1216700:intron 20.0%
!! TCAAGTATAATTCTAAATTG+TGG + chr8_1:78617353-78617372 Msa1216700:intron 20.0%
!!! TATATCATGAAGCAATTTTT+TGG + chr8_1:78617827-78617846 Msa1216700:intron 20.0%
!!! TTTTTATTATTATGTGTCCT+GGG - chr8_1:78618383-78618402 None:intergenic 20.0%
!!! ATTTTTATTATTATGTGTCC+TGG - chr8_1:78618384-78618403 None:intergenic 20.0%
!!! CTAAAGTCATTTTATAAAGT+CGG - chr8_1:78618466-78618485 None:intergenic 20.0%
!! ACTTTATAAAATGACTTTAG+AGG + chr8_1:78618466-78618485 Msa1216700:intron 20.0%
!! TAAAATAACGTTGAAAGTAA+TGG - chr8_1:78618532-78618551 None:intergenic 20.0%
!!! ATTTTACCTATTTGCTAAAT+CGG + chr8_1:78618546-78618565 Msa1216700:intron 20.0%
!!! TTTGTTGTTTAAATTTGCAT+TGG - chr8_1:78618731-78618750 None:intergenic 20.0%
!! AATCAATGAATTTGATTATC+AGG + chr8_1:78618819-78618838 Msa1216700:intron 20.0%
!! TTGATAGAAAATAAAGCAAA+GGG + chr8_1:78619260-78619279 Msa1216700:three_prime_UTR 20.0%
!!! ACTTTGAATTTTATATGCAA+AGG - chr8_1:78619305-78619324 None:intergenic 20.0%
! AATTATTGACAAATATGAGG+CGG - chr8_1:78610341-78610360 None:intergenic 25.0%
!! TCAGATAATAGGATTTTCAA+AGG + chr8_1:78610512-78610531 Msa1216700:CDS 25.0%
!! CAGATAATAGGATTTTCAAA+GGG + chr8_1:78610513-78610532 Msa1216700:CDS 25.0%
! GTTAAATAAATACCCTATTG+TGG + chr8_1:78611666-78611685 Msa1216700:intron 25.0%
! GTGGATCATATTTAATAAAC+TGG + chr8_1:78611753-78611772 Msa1216700:intron 25.0%
! TGTAACTATGTAATGAAACA+AGG - chr8_1:78612249-78612268 None:intergenic 25.0%
! GAAGTTATAAAAGAGTTGTA+AGG + chr8_1:78612425-78612444 Msa1216700:intron 25.0%
!! ATTTGTTGAAAATGAAATGG+AGG + chr8_1:78612919-78612938 Msa1216700:CDS 25.0%
! TTACTTTCTCATTATGTTCT+AGG + chr8_1:78613023-78613042 Msa1216700:intron 25.0%
!!! ATTATGTTCTAGGACTTTTT+TGG + chr8_1:78613033-78613052 Msa1216700:intron 25.0%
! TATGTTACATTCTTGATGTT+TGG - chr8_1:78613319-78613338 None:intergenic 25.0%
! AACATCAAGAATGTAACATA+CGG + chr8_1:78613319-78613338 Msa1216700:intron 25.0%
!! ATGTGTTTCTATTATAGCAT+TGG + chr8_1:78613347-78613366 Msa1216700:intron 25.0%
! AAGTTCTTGATGTAAATAGT+TGG + chr8_1:78613411-78613430 Msa1216700:intron 25.0%
! TTACAGCTTAAACTATCTAA+TGG - chr8_1:78613453-78613472 None:intergenic 25.0%
! TAACAAATGACGTTCATTAA+CGG - chr8_1:78613909-78613928 None:intergenic 25.0%
!! GAAAAGCTAAAGTATTCAAA+AGG + chr8_1:78614023-78614042 Msa1216700:CDS 25.0%
! AAAACATGAAGAAGTTAATG+GGG - chr8_1:78614163-78614182 None:intergenic 25.0%
! CAAAACATGAAGAAGTTAAT+GGG - chr8_1:78614164-78614183 None:intergenic 25.0%
! ACAAAACATGAAGAAGTTAA+TGG - chr8_1:78614165-78614184 None:intergenic 25.0%
!!! TTAAAGCTGTTTTCAATTCT+TGG + chr8_1:78614271-78614290 Msa1216700:CDS 25.0%
!!! TAAAGCTGTTTTCAATTCTT+GGG + chr8_1:78614272-78614291 Msa1216700:CDS 25.0%
! AAATTGTTTATAATAGGGAG+AGG + chr8_1:78614627-78614646 Msa1216700:intron 25.0%
! AATCAAAATAGCTGTAGATA+TGG + chr8_1:78614961-78614980 Msa1216700:CDS 25.0%
! CTTAAAGCAATCAATAAAAC+TGG - chr8_1:78615352-78615371 None:intergenic 25.0%
! AACGATATAATGAAATGAAG+GGG - chr8_1:78615572-78615591 None:intergenic 25.0%
! CTAACGATATAATGAAATGA+AGG - chr8_1:78615574-78615593 None:intergenic 25.0%
! CTAGTCATGAAATTAAATCT+AGG - chr8_1:78616047-78616066 None:intergenic 25.0%
!! CTAGATTTAATTTCATGACT+AGG + chr8_1:78616045-78616064 Msa1216700:intron 25.0%
! TCAAAATCTGATCTTTGATA+AGG - chr8_1:78616977-78616996 None:intergenic 25.0%
!! TTATCAAAGATCAGATTTTG+AGG + chr8_1:78616976-78616995 Msa1216700:CDS 25.0%
!! TATCAAAGATCAGATTTTGA+GGG + chr8_1:78616977-78616996 Msa1216700:CDS 25.0%
! ATTTCATTTAAATCACCTTC+AGG - chr8_1:78617073-78617092 None:intergenic 25.0%
! GGTGATTTAAATGAAATTGT+TGG + chr8_1:78617076-78617095 Msa1216700:CDS 25.0%
!!! ATGGTAATTTGTTATGAACA+AGG - chr8_1:78617221-78617240 None:intergenic 25.0%
! ATTTCAAATTGTCAAACATG+AGG - chr8_1:78617508-78617527 None:intergenic 25.0%
!!! AAGTTTTATGCATAGATGAT+AGG - chr8_1:78617730-78617749 None:intergenic 25.0%
! ATCTATGCATAAAACTTATG+AGG + chr8_1:78617733-78617752 Msa1216700:intron 25.0%
! TCAAGCTGATAAATTGTTAA+GGG - chr8_1:78617805-78617824 None:intergenic 25.0%
! TTCAAGCTGATAAATTGTTA+AGG - chr8_1:78617806-78617825 None:intergenic 25.0%
!! TAAAATTAGAAAGTGCAAAG+AGG - chr8_1:78618148-78618167 None:intergenic 25.0%
!! TGCGTTAGCTTAATATATAA+AGG + chr8_1:78618582-78618601 Msa1216700:intron 25.0%
! ATCAAAATTTGCACAGAAAA+GGG + chr8_1:78618672-78618691 Msa1216700:CDS 25.0%
! ATTATGGTGATAAAAGACTT+CGG + chr8_1:78618787-78618806 Msa1216700:intron 25.0%
! AATGAATTTGATTATCAGGT+TGG + chr8_1:78618823-78618842 Msa1216700:intron 25.0%
! TTAGTCAAACTGAAAATTTG+AGG + chr8_1:78619039-78619058 Msa1216700:intron 25.0%
! ATATAAAGTCTGATAAAGCA+AGG + chr8_1:78619225-78619244 Msa1216700:three_prime_UTR 25.0%
! CTTGATAGAAAATAAAGCAA+AGG + chr8_1:78619259-78619278 Msa1216700:three_prime_UTR 25.0%
ATTATTGACAAATATGAGGC+GGG - chr8_1:78610340-78610359 None:intergenic 30.0%
ACACATCAACATCAGATAAT+AGG + chr8_1:78610501-78610520 Msa1216700:CDS 30.0%
AACAAGAATGATGTTAGTGT+TGG + chr8_1:78610536-78610555 Msa1216700:CDS 30.0%
AATCATTCTTAATTAGACGG+AGG - chr8_1:78611070-78611089 None:intergenic 30.0%
CTTAATGATTCGTGTTTCTT+TGG + chr8_1:78611175-78611194 Msa1216700:intron 30.0%
TCTTTGGACATCTCAAAATA+TGG + chr8_1:78611191-78611210 Msa1216700:intron 30.0%
ACTAAATAAGGCTAGACTTA+AGG + chr8_1:78611284-78611303 Msa1216700:intron 30.0%
CTAAATAAGGCTAGACTTAA+GGG + chr8_1:78611285-78611304 Msa1216700:intron 30.0%
! TTTCTAGGGATGATAAAACA+GGG - chr8_1:78611459-78611478 None:intergenic 30.0%
! ATTTCTAGGGATGATAAAAC+AGG - chr8_1:78611460-78611479 None:intergenic 30.0%
AAAGTGCATCCAAAATGAAA+TGG + chr8_1:78611618-78611637 Msa1216700:intron 30.0%
! AAGCACAAACCATTTCATTT+TGG - chr8_1:78611630-78611649 None:intergenic 30.0%
AAATAAATACCCTATTGTGG+AGG + chr8_1:78611669-78611688 Msa1216700:intron 30.0%
AATAAATACCCTATTGTGGA+GGG + chr8_1:78611670-78611689 Msa1216700:intron 30.0%
! AAAATTTTCCCTCCACAATA+GGG - chr8_1:78611681-78611700 None:intergenic 30.0%
TACTTTCTCTTCACTTTATG+TGG + chr8_1:78611734-78611753 Msa1216700:intron 30.0%
TCCACTTAAACATCCAAAAT+AGG + chr8_1:78612170-78612189 Msa1216700:intron 30.0%
CCACTTAAACATCCAAAATA+GGG + chr8_1:78612171-78612190 Msa1216700:intron 30.0%
AGCATAAAGAATACTTACCA+AGG - chr8_1:78612612-78612631 None:intergenic 30.0%
CTTGTGTGTTAATTGTAGTT+GGG + chr8_1:78612746-78612765 Msa1216700:intron 30.0%
AATGAAAAGAACCTACCAAA+TGG + chr8_1:78612866-78612885 Msa1216700:CDS 30.0%
AGTAAAACCAAACAGGAAAA+AGG - chr8_1:78613008-78613027 None:intergenic 30.0%
ATGAGAAAGTAAAACCAAAC+AGG - chr8_1:78613015-78613034 None:intergenic 30.0%
ATAGCTTATGACATGTCTAT+AGG + chr8_1:78613110-78613129 Msa1216700:intron 30.0%
ACATCAAGAATGTAACATAC+GGG + chr8_1:78613320-78613339 Msa1216700:intron 30.0%
CAACTTAGGATTTATATCCA+AGG + chr8_1:78613377-78613396 Msa1216700:intron 30.0%
GAACTTGAAGTTAAAAACCT+TGG - chr8_1:78613397-78613416 None:intergenic 30.0%
!! TTTTTGAGGGAATCCTTTTA+TGG + chr8_1:78613599-78613618 Msa1216700:intron 30.0%
!! TACATACAAGTTGATGCAAT+AGG - chr8_1:78613637-78613656 None:intergenic 30.0%
TTCATTGTTTGAGGAGAAAT+TGG + chr8_1:78614001-78614020 Msa1216700:CDS 30.0%
! GATTCTAGAGAATCATTACA+AGG + chr8_1:78614741-78614760 Msa1216700:CDS 30.0%
GAATCATTACAAGGATATGA+TGG + chr8_1:78614750-78614769 Msa1216700:CDS 30.0%
ATTTCAGAAGAATTACTTGC+CGG - chr8_1:78614839-78614858 None:intergenic 30.0%
!! ACAAGGAAAAAGTGCAATTT+TGG + chr8_1:78615501-78615520 Msa1216700:CDS 30.0%
TCTGATTAAAAAGTCCAGAT+TGG + chr8_1:78615601-78615620 Msa1216700:intron 30.0%
! ATTCACATTTTCATCCAATC+TGG - chr8_1:78615618-78615637 None:intergenic 30.0%
! TACCTAATGGCTTAAGATTT+TGG + chr8_1:78615669-78615688 Msa1216700:intron 30.0%
TTCCAAAATCTTAAGCCATT+AGG - chr8_1:78615674-78615693 None:intergenic 30.0%
!!! GGAATTGTTTTAATCCACAT+AGG - chr8_1:78615775-78615794 None:intergenic 30.0%
ATTAAAACAATTCCCGCTTT+AGG + chr8_1:78615781-78615800 Msa1216700:intron 30.0%
TTAAAACAATTCCCGCTTTA+GGG + chr8_1:78615782-78615801 Msa1216700:intron 30.0%
! TTAAAGTATCACGTGTAAGT+AGG + chr8_1:78615857-78615876 Msa1216700:intron 30.0%
GTTTGAGCAACATTTAAATG+AGG + chr8_1:78615908-78615927 Msa1216700:intron 30.0%
!! ACAAGTTTTATGTGAACATG+TGG + chr8_1:78615951-78615970 Msa1216700:intron 30.0%
GGTTAAACAAATCATCCATA+AGG + chr8_1:78616066-78616085 Msa1216700:intron 30.0%
ATACACACTTGCATTATTGA+AGG + chr8_1:78616108-78616127 Msa1216700:intron 30.0%
TGTCAACAATATAGAATCCA+AGG - chr8_1:78616302-78616321 None:intergenic 30.0%
TATCCATTTATGATGATAGG+TGG + chr8_1:78616363-78616382 Msa1216700:intron 30.0%
TGATGAAATAAGGAATCTGA+AGG + chr8_1:78616522-78616541 Msa1216700:CDS 30.0%
CAAAACATCTAATTCTTGCT+AGG + chr8_1:78616588-78616607 Msa1216700:intron 30.0%
TCATATCATTGTTGTGTATC+AGG + chr8_1:78616620-78616639 Msa1216700:intron 30.0%
!!! AGTTTTTTGCTTCAGATGAA+AGG + chr8_1:78616879-78616898 Msa1216700:intron 30.0%
AAGAAGAAGAAATAGTCTCT+AGG + chr8_1:78617125-78617144 Msa1216700:CDS 30.0%
! TTTGAAGTTAATCCAATGCT+TGG + chr8_1:78617160-78617179 Msa1216700:CDS 30.0%
TGAACAAGGATCATAAAAAG+AGG - chr8_1:78617207-78617226 None:intergenic 30.0%
!!! TGTTATTTTGTCCTAAATCG+TGG - chr8_1:78617429-78617448 None:intergenic 30.0%
! CAATTTGAAATTACGTGAAC+AGG + chr8_1:78617517-78617536 Msa1216700:intron 30.0%
! TTAATTCCTGTCGGTTAAAA+AGG - chr8_1:78617914-78617933 None:intergenic 30.0%
GACATCAAGTGAGTTTAATA+AGG + chr8_1:78617934-78617953 Msa1216700:CDS 30.0%
TCTTCATTAAGCTATAAGGT+TGG + chr8_1:78617990-78618009 Msa1216700:CDS 30.0%
TCATTTGCAATCTACACAAA+TGG - chr8_1:78618175-78618194 None:intergenic 30.0%
GGTTCCAAATGAAAAGAAAT+CGG - chr8_1:78618200-78618219 None:intergenic 30.0%
! ACTGTAACCAAATGTCATTT+GGG - chr8_1:78618233-78618252 None:intergenic 30.0%
TACTGTAACCAAATGTCATT+TGG - chr8_1:78618234-78618253 None:intergenic 30.0%
! TAAAATGACTTTAGAGGTGT+AGG + chr8_1:78618472-78618491 Msa1216700:intron 30.0%
AAATTATTGACAACAACTGC+AGG + chr8_1:78618620-78618639 Msa1216700:intron 30.0%
CATCAAAATTTGCACAGAAA+AGG + chr8_1:78618671-78618690 Msa1216700:CDS 30.0%
TGGTAAGTTACCTTCAAATT+TGG - chr8_1:78618711-78618730 None:intergenic 30.0%
!! TTATTAGACTGTTTCTGTCA+AGG + chr8_1:78619124-78619143 Msa1216700:three_prime_UTR 30.0%
!! TATTAGACTGTTTCTGTCAA+GGG + chr8_1:78619125-78619144 Msa1216700:three_prime_UTR 30.0%
ACTGGTGTGGAATTATATAT+AGG + chr8_1:78619449-78619468 Msa1216700:three_prime_UTR 30.0%
ATTCGAACAAAGATAATACG+TGG - chr8_1:78619545-78619564 None:intergenic 30.0%
GAATTAATTGATCCGAACAT+GGG + chr8_1:78619561-78619580 Msa1216700:three_prime_UTR 30.0%
CTCATTCTTAATTCACTTCA+TGG - chr8_1:78619588-78619607 None:intergenic 30.0%
! AACAACTGCCATTTCGATTT+CGG + chr8_1:78610413-78610432 Msa1216700:five_prime_UTR 35.0%
ATTTCGGGAAGTTTCTCTTT+GGG + chr8_1:78610429-78610448 Msa1216700:five_prime_UTR 35.0%
TATGACTATGCCTCTTACTA+TGG - chr8_1:78610477-78610496 None:intergenic 35.0%
! TAGTAAGAGGCATAGTCATA+AGG + chr8_1:78610477-78610496 Msa1216700:CDS 35.0%
! AAGAATGATGTTAGTGTTGG+TGG + chr8_1:78610539-78610558 Msa1216700:CDS 35.0%
!! AGAATGATGTTAGTGTTGGT+GGG + chr8_1:78610540-78610559 Msa1216700:CDS 35.0%
ATAGTTTGGCAACGAATTGA+AGG - chr8_1:78610650-78610669 None:intergenic 35.0%
TTGTTGGGGTAAGAATAGTT+TGG - chr8_1:78610664-78610683 None:intergenic 35.0%
!!! AAGTGTACCTTTTTTGTGGT+GGG - chr8_1:78610692-78610711 None:intergenic 35.0%
!!! CTAGAAGTGTACCTTTTTTG+TGG - chr8_1:78610696-78610715 None:intergenic 35.0%
! ACGTAAAAAAAGCATGCAGT+TGG - chr8_1:78611000-78611019 None:intergenic 35.0%
ATTCTTAATTAGACGGAGGA+TGG - chr8_1:78611066-78611085 None:intergenic 35.0%
TGGACCACAAATTGTAAAAG+CGG + chr8_1:78611248-78611267 Msa1216700:intron 35.0%
! CCTTATTTAGTTTCGTACTG+AGG - chr8_1:78611275-78611294 None:intergenic 35.0%
CCTCAGTACGAAACTAAATA+AGG + chr8_1:78611272-78611291 Msa1216700:intron 35.0%
!!! TCCATTACACCTGCTATTTT+GGG - chr8_1:78611420-78611439 None:intergenic 35.0%
!! ATCCATTACACCTGCTATTT+TGG - chr8_1:78611421-78611440 None:intergenic 35.0%
!! AAATAGCAGGTGTAATGGAT+CGG + chr8_1:78611421-78611440 Msa1216700:intron 35.0%
! CAAAATTTTCCCTCCACAAT+AGG - chr8_1:78611682-78611701 None:intergenic 35.0%
! CTATTGTGGAGGGAAAATTT+TGG + chr8_1:78611680-78611699 Msa1216700:intron 35.0%
TTTGGATGTTTAAGTGGATC+CGG - chr8_1:78612168-78612187 None:intergenic 35.0%
!! CCCTATTTTGGATGTTTAAG+TGG - chr8_1:78612174-78612193 None:intergenic 35.0%
TTTGGAAATCATAGCTGCAT+TGG - chr8_1:78612457-78612476 None:intergenic 35.0%
!!! ATACAGAGAGTGTTCACTTT+TGG + chr8_1:78612551-78612570 Msa1216700:intron 35.0%
TTTGGCAAAGGTAAAAGTGA+AGG + chr8_1:78612569-78612588 Msa1216700:CDS 35.0%
AGGTAAAAGTGAAGGAAACA+AGG + chr8_1:78612577-78612596 Msa1216700:CDS 35.0%
AATACTTACCAAGGACTTCA+TGG - chr8_1:78612603-78612622 None:intergenic 35.0%
GCTTGTGTGTTAATTGTAGT+TGG + chr8_1:78612745-78612764 Msa1216700:intron 35.0%
TTAATTGTAGTTGGGAGGAA+AGG + chr8_1:78612754-78612773 Msa1216700:intron 35.0%
TAATTGTAGTTGGGAGGAAA+GGG + chr8_1:78612755-78612774 Msa1216700:intron 35.0%
TTAGCAGAAATGGCAACAAT+TGG + chr8_1:78612785-78612804 Msa1216700:CDS 35.0%
!! TTTTGAAGGATTCCCAAGAA+AGG - chr8_1:78612945-78612964 None:intergenic 35.0%
! GTAAAAGCCTTTTTCCTGTT+TGG + chr8_1:78612998-78613017 Msa1216700:intron 35.0%
TAACCATTTGGTAGAGCTTA+TGG + chr8_1:78613085-78613104 Msa1216700:intron 35.0%
TTTCCATAAGCTCTACCAAA+TGG - chr8_1:78613091-78613110 None:intergenic 35.0%
TTTCCAATCATAGAGAATCC+AGG + chr8_1:78613272-78613291 Msa1216700:intron 35.0%
GCATGTAAGTACACCATAAA+AGG - chr8_1:78613615-78613634 None:intergenic 35.0%
ATATATCAGATTTCCATGCC+TGG + chr8_1:78613665-78613684 Msa1216700:intron 35.0%
ATGGACACAGTTCTTAATCT+TGG + chr8_1:78613692-78613711 Msa1216700:CDS 35.0%
TCTTGGATTGAATGATGAAG+TGG + chr8_1:78613709-78613728 Msa1216700:CDS 35.0%
AGACGTTTCTTAGACATGTT+TGG + chr8_1:78613782-78613801 Msa1216700:CDS 35.0%
GAAAAGTTTCATGGAAGCAA+TGG - chr8_1:78613939-78613958 None:intergenic 35.0%
CATTCCACATTCATTGTTTG+AGG + chr8_1:78613992-78614011 Msa1216700:CDS 35.0%
TTCTCCTCAAACAATGAATG+TGG - chr8_1:78613999-78614018 None:intergenic 35.0%
GATCTGCAATTGGTAAATCA+AGG - chr8_1:78614227-78614246 None:intergenic 35.0%
! GCTAATTCTAGTTGCTTCTT+TGG - chr8_1:78614249-78614268 None:intergenic 35.0%
TCCTATACTTATTAGCCCTT+GGG - chr8_1:78614302-78614321 None:intergenic 35.0%
!! AGGAGCATTAATCAGATAAC+TGG + chr8_1:78614318-78614337 Msa1216700:CDS 35.0%
! TAATCAGATAACTGGACTAG+TGG + chr8_1:78614326-78614345 Msa1216700:CDS 35.0%
!! AATCAGATAACTGGACTAGT+GGG + chr8_1:78614327-78614346 Msa1216700:CDS 35.0%
! CACCATGGATTGAATGTTTA+CGG - chr8_1:78614358-78614377 None:intergenic 35.0%
AACATTCAATCCATGGTGTT+TGG + chr8_1:78614360-78614379 Msa1216700:CDS 35.0%
! ATCCATGGTGTTTGGTAATA+TGG + chr8_1:78614368-78614387 Msa1216700:CDS 35.0%
! TCCATGGTGTTTGGTAATAT+GGG + chr8_1:78614369-78614388 Msa1216700:CDS 35.0%
GGTAATATGGGAAATACTTC+AGG + chr8_1:78614381-78614400 Msa1216700:CDS 35.0%
ACTGGGGAAAAGAAACTTTA+TGG + chr8_1:78614435-78614454 Msa1216700:CDS 35.0%
CTGGGGAAAAGAAACTTTAT+GGG + chr8_1:78614436-78614455 Msa1216700:CDS 35.0%
TGGGGAAAAGAAACTTTATG+GGG + chr8_1:78614437-78614456 Msa1216700:CDS 35.0%
GTAGAAACATCAACACCAAA+AGG - chr8_1:78614606-78614625 None:intergenic 35.0%
TTCATGGTCTCTAAATCTTC+AGG - chr8_1:78614676-78614695 None:intergenic 35.0%
TCAAGTTCCTTATAAGCATC+CGG - chr8_1:78614709-78614728 None:intergenic 35.0%
! GTTTGTTTGTATCGATAGAC+CGG + chr8_1:78614817-78614836 Msa1216700:intron 35.0%
CTGTTCAGGAAAATAGATTG+TGG + chr8_1:78614897-78614916 Msa1216700:CDS 35.0%
TATTCGTTCTGCAATCAAGA+TGG + chr8_1:78615003-78615022 Msa1216700:CDS 35.0%
ACTTTGTCCTTGTACTTAGA+TGG - chr8_1:78615397-78615416 None:intergenic 35.0%
ATCTAAGTACAAGGACAAAG+TGG + chr8_1:78615396-78615415 Msa1216700:CDS 35.0%
TGGTTTCTCTAAGCATAGTA+TGG + chr8_1:78615727-78615746 Msa1216700:intron 35.0%
TAAAACAATTCCCGCTTTAG+GGG + chr8_1:78615783-78615802 Msa1216700:intron 35.0%
CATAATGTTTCTCTCCATGT+TGG - chr8_1:78616005-78616024 None:intergenic 35.0%
CAACATGGAGAGAAACATTA+TGG + chr8_1:78616003-78616022 Msa1216700:intron 35.0%
TGGAGAGAAACATTATGGTT+AGG + chr8_1:78616008-78616027 Msa1216700:intron 35.0%
CACTTGCATTATTGAAGGTA+AGG + chr8_1:78616113-78616132 Msa1216700:intron 35.0%
ATGGTCGTTTATTTGGATGT+CGG - chr8_1:78616269-78616288 None:intergenic 35.0%
! CCTTTTCATGGTCGTTTATT+TGG - chr8_1:78616276-78616295 None:intergenic 35.0%
CCAAATAAACGACCATGAAA+AGG + chr8_1:78616273-78616292 Msa1216700:CDS 35.0%
! AATCCAAGGTTACCTTTTCA+TGG - chr8_1:78616288-78616307 None:intergenic 35.0%
CAACCACCTATCATCATAAA+TGG - chr8_1:78616369-78616388 None:intergenic 35.0%
TGATGATAGGTGGTTGTAAT+TGG + chr8_1:78616373-78616392 Msa1216700:intron 35.0%
GATGATAGGTGGTTGTAATT+GGG + chr8_1:78616374-78616393 Msa1216700:intron 35.0%
ATGATAGGTGGTTGTAATTG+GGG + chr8_1:78616375-78616394 Msa1216700:intron 35.0%
ACGTAATATCAGAAGGAGAA+TGG + chr8_1:78616401-78616420 Msa1216700:CDS 35.0%
ATTTGGGAACTTTCATGTCT+TGG + chr8_1:78616497-78616516 Msa1216700:CDS 35.0%
TTTGGGAACTTTCATGTCTT+GGG + chr8_1:78616498-78616517 Msa1216700:CDS 35.0%
! CATTGTTGTGTATCAGGTTT+TGG + chr8_1:78616626-78616645 Msa1216700:intron 35.0%
TGCTTCAGATGAAAGGATAA+AGG + chr8_1:78616886-78616905 Msa1216700:CDS 35.0%
AGCCAATATCATCATTCTCA+CGG - chr8_1:78616912-78616931 None:intergenic 35.0%
TCAGGAAGAAATTCATGAAG+TGG - chr8_1:78617055-78617074 None:intergenic 35.0%
CTTCATGAATTTCTTCCTGA+AGG + chr8_1:78617055-78617074 Msa1216700:CDS 35.0%
CACAAGTCATAGGATATTGA+TGG - chr8_1:78617240-78617259 None:intergenic 35.0%
CAACACTAAACACAAGTCAT+AGG - chr8_1:78617250-78617269 None:intergenic 35.0%
TTATATTGCGGCCATAATTG+TGG - chr8_1:78617386-78617405 None:intergenic 35.0%
ACAATTATGGCCGCAATATA+AGG + chr8_1:78617385-78617404 Msa1216700:intron 35.0%
ACACTGAGAACCTTATATTG+CGG - chr8_1:78617398-78617417 None:intergenic 35.0%
TTGAAATTACGTGAACAGGT+TGG + chr8_1:78617521-78617540 Msa1216700:intron 35.0%
TGAAATTACGTGAACAGGTT+GGG + chr8_1:78617522-78617541 Msa1216700:intron 35.0%
TGAAATAGCAGCTTGGAAAA+CGG - chr8_1:78617586-78617605 None:intergenic 35.0%
TAGAAAAAAGATCATGCCTG+AGG - chr8_1:78617666-78617685 None:intergenic 35.0%
CTTGATGTCTTAATTCCTGT+CGG - chr8_1:78617923-78617942 None:intergenic 35.0%
!! GAAGCCGATTTCTTTTCATT+TGG + chr8_1:78618193-78618212 Msa1216700:CDS 35.0%
! AACCAAATGTCATTTGGGTA+AGG - chr8_1:78618228-78618247 None:intergenic 35.0%
ACTATGGAACTAACCTCAAA+TGG - chr8_1:78618316-78618335 None:intergenic 35.0%
ACAACAGTATGAGAAATCAC+CGG - chr8_1:78618346-78618365 None:intergenic 35.0%
! TTTAGAGGTGTAGGATAAGT+GGG + chr8_1:78618481-78618500 Msa1216700:intron 35.0%
! TTACCTATTTGCTAAATCGG+AGG + chr8_1:78618549-78618568 Msa1216700:intron 35.0%
TGCTGCTAAACCAAATTTGA+AGG + chr8_1:78618698-78618717 Msa1216700:CDS 35.0%
! CAAAATTTTGTCACGCATCT+TGG + chr8_1:78618747-78618766 Msa1216700:intron 35.0%
!! GATTATCAGGTTGGAATATG+TGG + chr8_1:78618832-78618851 Msa1216700:intron 35.0%
TCATACTAATCTGACCTGAA+TGG - chr8_1:78618928-78618947 None:intergenic 35.0%
!! GTGTAAAAAATAAAGTGCCG+TGG - chr8_1:78618965-78618984 None:intergenic 35.0%
! AAATTTGAGGACTCTTTTGC+AGG + chr8_1:78619052-78619071 Msa1216700:intron 35.0%
! AATTTGAGGACTCTTTTGCA+GGG + chr8_1:78619053-78619072 Msa1216700:intron 35.0%
!! GTATTTGGTGTATAAGACAC+TGG + chr8_1:78619431-78619450 Msa1216700:three_prime_UTR 35.0%
CGAATTAATTGATCCGAACA+TGG + chr8_1:78619560-78619579 Msa1216700:three_prime_UTR 35.0%
! ACAACTGCCATTTCGATTTC+GGG + chr8_1:78610414-78610433 Msa1216700:five_prime_UTR 40.0%
GAAACTTCCCGAAATCGAAA+TGG - chr8_1:78610424-78610443 None:intergenic 40.0%
GATTTCGGGAAGTTTCTCTT+TGG + chr8_1:78610428-78610447 Msa1216700:five_prime_UTR 40.0%
GAGATGTCTACCATAGTAAG+AGG + chr8_1:78610464-78610483 Msa1216700:exon 40.0%
AGTTACGGCTTACATCAACA+TGG + chr8_1:78610597-78610616 Msa1216700:CDS 40.0%
!!! GAAGTGTACCTTTTTTGTGG+TGG - chr8_1:78610693-78610712 None:intergenic 40.0%
!! AGGTCCGCTTTTACAATTTG+TGG - chr8_1:78611255-78611274 None:intergenic 40.0%
TTCTGCCAAACTCTATCTTC+AGG - chr8_1:78611335-78611354 None:intergenic 40.0%
!!! ATTACACCTGCTATTTTGGG+CGG - chr8_1:78611417-78611436 None:intergenic 40.0%
AATAAGTGATGTGTGCATGC+CGG + chr8_1:78612146-78612165 Msa1216700:intron 40.0%
!! CACAATAGAGCACCCTATTT+TGG - chr8_1:78612186-78612205 None:intergenic 40.0%
! CAAAATAGGGTGCTCTATTG+TGG + chr8_1:78612184-78612203 Msa1216700:intron 40.0%
!! AGAGTGTTCACTTTTGGCAA+AGG + chr8_1:78612557-78612576 Msa1216700:CDS 40.0%
GTGTGTTAATTGTAGTTGGG+AGG + chr8_1:78612749-78612768 Msa1216700:intron 40.0%
! TGTTGCCATTTCTGCTAAGT+TGG - chr8_1:78612783-78612802 None:intergenic 40.0%
TCTGTTGATATAGTGAGTCC+AGG - chr8_1:78612824-78612843 None:intergenic 40.0%
AGAACCTACCAAATGGTTTG+TGG + chr8_1:78612873-78612892 Msa1216700:CDS 40.0%
! GAACCTACCAAATGGTTTGT+GGG + chr8_1:78612874-78612893 Msa1216700:CDS 40.0%
AATGAAATGGAGGCCTTTCT+TGG + chr8_1:78612929-78612948 Msa1216700:CDS 40.0%
ATGAAATGGAGGCCTTTCTT+GGG + chr8_1:78612930-78612949 Msa1216700:CDS 40.0%
AAGCCTGGATTCTCTATGAT+TGG - chr8_1:78613278-78613297 None:intergenic 40.0%
AACAAATGTGATCGTAAGCC+TGG - chr8_1:78613293-78613312 None:intergenic 40.0%
!! GCATTGGTTCAACTCAACTT+AGG + chr8_1:78613363-78613382 Msa1216700:intron 40.0%
TTGAATGATGAAGTGGTTGC+TGG + chr8_1:78613716-78613735 Msa1216700:CDS 40.0%
TGAATGATGAAGTGGTTGCT+GGG + chr8_1:78613717-78613736 Msa1216700:CDS 40.0%
CGTTTCTTAGACATGTTTGG+AGG + chr8_1:78613785-78613804 Msa1216700:CDS 40.0%
CGTTCATTAACGGAGTGTAT+TGG - chr8_1:78613899-78613918 None:intergenic 40.0%
!! AACCAGATCTTTGAGATCGT+TGG - chr8_1:78614075-78614094 None:intergenic 40.0%
TAAATCAAGGAGCAAGTGTG+GGG - chr8_1:78614214-78614233 None:intergenic 40.0%
GTAAATCAAGGAGCAAGTGT+GGG - chr8_1:78614215-78614234 None:intergenic 40.0%
TGCTTCTTTGGATCTGCAAT+TGG - chr8_1:78614237-78614256 None:intergenic 40.0%
CTCCTATACTTATTAGCCCT+TGG - chr8_1:78614303-78614322 None:intergenic 40.0%
TGCCGTAAACATTCAATCCA+TGG + chr8_1:78614353-78614372 Msa1216700:CDS 40.0%
TCCCATATTACCAAACACCA+TGG - chr8_1:78614373-78614392 None:intergenic 40.0%
ATGGGAAATACTTCAGGAAC+TGG + chr8_1:78614387-78614406 Msa1216700:CDS 40.0%
TTCACTAGAAATCCAAGCAC+TGG + chr8_1:78614417-78614436 Msa1216700:CDS 40.0%
TCACTAGAAATCCAAGCACT+GGG + chr8_1:78614418-78614437 Msa1216700:CDS 40.0%
GGAGTTTCTCATTAATGCTC+AGG + chr8_1:78614458-78614477 Msa1216700:CDS 40.0%
GGATGCTTATAAGGAACTTG+AGG + chr8_1:78614708-78614727 Msa1216700:CDS 40.0%
GGATATTGAGTTCACTGTTC+AGG + chr8_1:78614883-78614902 Msa1216700:intron 40.0%
! AGTGGAAAACGTACTGGTAA+AGG + chr8_1:78614935-78614954 Msa1216700:CDS 40.0%
AGCTGTAGATATGGTCAATG+AGG + chr8_1:78614970-78614989 Msa1216700:CDS 40.0%
GCTGTAGATATGGTCAATGA+GGG + chr8_1:78614971-78614990 Msa1216700:CDS 40.0%
CTGTAGATATGGTCAATGAG+GGG + chr8_1:78614972-78614991 Msa1216700:CDS 40.0%
GCAACTAAGCATATACCTGT+GGG - chr8_1:78615060-78615079 None:intergenic 40.0%
TGCAACTAAGCATATACCTG+TGG - chr8_1:78615061-78615080 None:intergenic 40.0%
TGAGGATCCATCTAAGTACA+AGG + chr8_1:78615387-78615406 Msa1216700:CDS 40.0%
GAGACGACTCATATACCTAA+TGG + chr8_1:78615656-78615675 Msa1216700:intron 40.0%
CTTAGAGAAACCACACAAGT+GGG - chr8_1:78615720-78615739 None:intergenic 40.0%
AGCATAGTATGGATATCTCC+CGG + chr8_1:78615738-78615757 Msa1216700:intron 40.0%
! AAAACAATTCCCGCTTTAGG+GGG + chr8_1:78615784-78615803 Msa1216700:intron 40.0%
TCAGAGCAACATAACTGGAT+TGG - chr8_1:78615980-78615999 None:intergenic 40.0%
GGGGATAACGTAATATCAGA+AGG + chr8_1:78616394-78616413 Msa1216700:CDS 40.0%
TGTCTTGGGCTGATGAAATA+AGG + chr8_1:78616512-78616531 Msa1216700:CDS 40.0%
GCAATAGCAGCTAGACAAAA+CGG + chr8_1:78616672-78616691 Msa1216700:CDS 40.0%
!!! ACTTTTTAGAGCATGCCACA+CGG + chr8_1:78616809-78616828 Msa1216700:intron 40.0%
TGTAACTACTAACTACCGTG+TGG - chr8_1:78616827-78616846 None:intergenic 40.0%
!!! TGAGGGAATTTTTCGAGCAA+TGG + chr8_1:78616994-78617013 Msa1216700:CDS 40.0%
!!! GGAATTTTTCGAGCAATGGA+TGG + chr8_1:78616998-78617017 Msa1216700:CDS 40.0%
CTAACAACCGGATTGTTACT+GGG - chr8_1:78617027-78617046 None:intergenic 40.0%
TCTAACAACCGGATTGTTAC+TGG - chr8_1:78617028-78617047 None:intergenic 40.0%
GGAAGAAATTCATGAAGTGG+AGG - chr8_1:78617052-78617071 None:intergenic 40.0%
!! AATCCAATGCTTGGTTTTCG+TGG + chr8_1:78617169-78617188 Msa1216700:CDS 40.0%
TAGCAATTCAGTAGGGTTAG+AGG + chr8_1:78617291-78617310 Msa1216700:intron 40.0%
AATTCAGTAGGGTTAGAGGA+GGG + chr8_1:78617295-78617314 Msa1216700:intron 40.0%
! GTGGTTTGCAACCACAATTA+TGG + chr8_1:78617372-78617391 Msa1216700:intron 40.0%
TGTAACCACAACCACGATTT+AGG + chr8_1:78617415-78617434 Msa1216700:intron 40.0%
TTTGTCCTAAATCGTGGTTG+TGG - chr8_1:78617423-78617442 None:intergenic 40.0%
TACTCACTGAAATAGCAGCT+TGG - chr8_1:78617593-78617612 None:intergenic 40.0%
TACAGTCCTTCCAGAGATAA+TGG + chr8_1:78617623-78617642 Msa1216700:CDS 40.0%
!! TGAGAAAGTGTTCTCTGAGA+TGG + chr8_1:78617965-78617984 Msa1216700:CDS 40.0%
!! GAGAAAGTGTTCTCTGAGAT+GGG + chr8_1:78617966-78617985 Msa1216700:CDS 40.0%
GGGCTCTTCATTAAGCTATA+AGG + chr8_1:78617986-78618005 Msa1216700:CDS 40.0%
GACCTTACCCAAATGACATT+TGG + chr8_1:78618223-78618242 Msa1216700:CDS 40.0%
TTTGCAGCATGATCCATTTG+AGG + chr8_1:78618300-78618319 Msa1216700:CDS 40.0%
! TGTTACTCTTGTTTCATCCC+AGG + chr8_1:78618363-78618382 Msa1216700:intron 40.0%
! CTTTAGAGGTGTAGGATAAG+TGG + chr8_1:78618480-78618499 Msa1216700:intron 40.0%
TCACCTCCGATTTAGCAAAT+AGG - chr8_1:78618555-78618574 None:intergenic 40.0%
GCAAAGAATGCAACAGAAGA+AGG - chr8_1:78618874-78618893 None:intergenic 40.0%
GTTGCATTCTTTGCTCAACT+TGG + chr8_1:78618880-78618899 Msa1216700:CDS 40.0%
ATGTCTCATGTTCACCATTC+AGG + chr8_1:78618911-78618930 Msa1216700:CDS 40.0%
TGATGCTCTTCAATTTGCCA+CGG + chr8_1:78618945-78618964 Msa1216700:intron 40.0%
TCAATTTGCAGCGTAAGGAA+CGG + chr8_1:78619101-78619120 Msa1216700:exon 40.0%
TTTGATTGCATACCGTGTCT+TGG + chr8_1:78619407-78619426 Msa1216700:three_prime_UTR 40.0%
! ATACCGTGTCTTGGTGTATT+TGG + chr8_1:78619416-78619435 Msa1216700:three_prime_UTR 40.0%
ACACCAAATACACCAAGACA+CGG - chr8_1:78619422-78619441 None:intergenic 40.0%
! TGGTGGGAGAAGAAGTACAA+AGG + chr8_1:78610556-78610575 Msa1216700:CDS 45.0%
! GAAGAAGTACAAAGGTGCAG+TGG + chr8_1:78610564-78610583 Msa1216700:CDS 45.0%
! AAGTACAAAGGTGCAGTGGA+AGG + chr8_1:78610568-78610587 Msa1216700:CDS 45.0%
AGTGGAAGGAGTTGCAGTTA+CGG + chr8_1:78610582-78610601 Msa1216700:CDS 45.0%
AACACCACCCACCACAAAAA+AGG + chr8_1:78610682-78610701 Msa1216700:CDS 45.0%
!!! TGTACCTTTTTTGTGGTGGG+TGG - chr8_1:78610689-78610708 None:intergenic 45.0%
!! GTGAAAGCGTAGCTTGTTTC+TGG + chr8_1:78611228-78611247 Msa1216700:intron 45.0%
TGCCAAACTCTATCTTCAGG+CGG - chr8_1:78611332-78611351 None:intergenic 45.0%
!!! TTACACCTGCTATTTTGGGC+GGG - chr8_1:78611416-78611435 None:intergenic 45.0%
GCCCAAAATAGCAGGTGTAA+TGG + chr8_1:78611416-78611435 Msa1216700:intron 45.0%
AAACAAGGCCATGAAGTCCT+TGG + chr8_1:78612592-78612611 Msa1216700:CDS 45.0%
! ATTGGTTTATCTGTGCCTCC+TGG + chr8_1:78612803-78612822 Msa1216700:CDS 45.0%
GTTGATATAGTGAGTCCAGG+AGG - chr8_1:78612821-78612840 None:intergenic 45.0%
ATCTCCTCCCACAAACCATT+TGG - chr8_1:78612884-78612903 None:intergenic 45.0%
TTGTGGGAGGAGATACTTGA+AGG + chr8_1:78612890-78612909 Msa1216700:CDS 45.0%
GATTTCCATGCCTGGAATGA+TGG + chr8_1:78613673-78613692 Msa1216700:intron 45.0%
AGAACTGTGTCCATCATTCC+AGG - chr8_1:78613686-78613705 None:intergenic 45.0%
TGGCTTCAAAAAGTGGAGAG+CGG + chr8_1:78613741-78613760 Msa1216700:CDS 45.0%
AGCCAACGATCTCAAAGATC+TGG + chr8_1:78614070-78614089 Msa1216700:CDS 45.0%
AGTGTCTACCTCGAAGCTAA+GGG + chr8_1:78614107-78614126 Msa1216700:CDS 45.0%
! ACTTTTCTCCCTTAGCTTCG+AGG - chr8_1:78614118-78614137 None:intergenic 45.0%
AAGGGAGAAAAGTTTCCCTC+AGG + chr8_1:78614125-78614144 Msa1216700:CDS 45.0%
AAGTTTCCCTCAGGTGCTAA+CGG + chr8_1:78614134-78614153 Msa1216700:intron 45.0%
GGTAAATCAAGGAGCAAGTG+TGG - chr8_1:78614216-78614235 None:intergenic 45.0%
TCAATTCTTGGGATAGCCCA+AGG + chr8_1:78614283-78614302 Msa1216700:CDS 45.0%
CAATTCTTGGGATAGCCCAA+GGG + chr8_1:78614284-78614303 Msa1216700:CDS 45.0%
GCCCAAGGGCTAATAAGTAT+AGG + chr8_1:78614298-78614317 Msa1216700:CDS 45.0%
! CACTAGAAATCCAAGCACTG+GGG + chr8_1:78614419-78614438 Msa1216700:CDS 45.0%
! AGTTTCTTTTCCCCAGTGCT+TGG - chr8_1:78614432-78614451 None:intergenic 45.0%
ATCTTCAGGTGTCCTGATTC+CGG - chr8_1:78614662-78614681 None:intergenic 45.0%
GACCATGAAAACTTGCATGC+CGG + chr8_1:78614687-78614706 Msa1216700:CDS 45.0%
! ATCCGGCATGCAAGTTTTCA+TGG - chr8_1:78614692-78614711 None:intergenic 45.0%
TTGCATGCCGGATGCTTATA+AGG + chr8_1:78614699-78614718 Msa1216700:CDS 45.0%
TGGATGTTGCAATGTCGAAG+TGG + chr8_1:78614917-78614936 Msa1216700:CDS 45.0%
TGTCGAAGTGGAAAACGTAC+TGG + chr8_1:78614929-78614948 Msa1216700:CDS 45.0%
AAGCATATACCTGTGGGTGT+AGG - chr8_1:78615054-78615073 None:intergenic 45.0%
TCCTTGTGCATGCCATTGTT+CGG - chr8_1:78615488-78615507 None:intergenic 45.0%
GCTTAGAGAAACCACACAAG+TGG - chr8_1:78615721-78615740 None:intergenic 45.0%
! ATGGATATCTCCCGGTGTTT+TGG + chr8_1:78615746-78615765 Msa1216700:intron 45.0%
ACATAGGTGACCAAAACACC+GGG - chr8_1:78615759-78615778 None:intergenic 45.0%
CACATAGGTGACCAAAACAC+CGG - chr8_1:78615760-78615779 None:intergenic 45.0%
TAGGTGACAAGTGCATGTTC+TGG + chr8_1:78615811-78615830 Msa1216700:intron 45.0%
TTCTGGACTCACACTCGAAA+GGG + chr8_1:78615828-78615847 Msa1216700:intron 45.0%
TGGTCTCAGAGCAACATAAC+TGG - chr8_1:78615985-78616004 None:intergenic 45.0%
!! ATGTTGCTCTGAGACCAACA+TGG + chr8_1:78615988-78616007 Msa1216700:intron 45.0%
CGACCATGAAAAGGTAACCT+TGG + chr8_1:78616282-78616301 Msa1216700:intron 45.0%
GGAGAATGGATCTCGTTGAA+TGG + chr8_1:78616415-78616434 Msa1216700:CDS 45.0%
ATCTCGTTGAATGGATCCAC+AGG + chr8_1:78616424-78616443 Msa1216700:CDS 45.0%
TGAGGTGATACTTGGAAAGC+AGG + chr8_1:78616447-78616466 Msa1216700:CDS 45.0%
CTAGCTGCTATTGCATCTTC+AGG - chr8_1:78616666-78616685 None:intergenic 45.0%
ACTTTGCAGGACAGAACACA+TGG + chr8_1:78616710-78616729 Msa1216700:CDS 45.0%
GGCCGTGAGAATGATGATAT+TGG + chr8_1:78616907-78616926 Msa1216700:CDS 45.0%
TGGCTATTACGCAAGAACAG+AGG + chr8_1:78616927-78616946 Msa1216700:CDS 45.0%
ATGGTCTCCCAGTAACAATC+CGG + chr8_1:78617017-78617036 Msa1216700:CDS 45.0%
GAAGTGGAGGATCTAACAAC+CGG - chr8_1:78617039-78617058 None:intergenic 45.0%
GGTGAACTAACTTCTCAGAC+AGG + chr8_1:78617097-78617116 Msa1216700:CDS 45.0%
CAATTCAGTAGGGTTAGAGG+AGG + chr8_1:78617294-78617313 Msa1216700:intron 45.0%
TCCTGAATTGACTGAGATGC+AGG + chr8_1:78617554-78617573 Msa1216700:CDS 45.0%
! GCTATTTCAGTGAGTAGCCA+TGG + chr8_1:78617597-78617616 Msa1216700:CDS 45.0%
CTGGAAGGACTGTAATACCA+TGG - chr8_1:78617617-78617636 None:intergenic 45.0%
GTGGAACCATTATCTCTGGA+AGG - chr8_1:78617632-78617651 None:intergenic 45.0%
ACGAGTGGAACCATTATCTC+TGG - chr8_1:78617636-78617655 None:intergenic 45.0%
! GAGATAATGGTTCCACTCGT+CGG + chr8_1:78617636-78617655 Msa1216700:CDS 45.0%
! CTCGATCCTTTTTAACCGAC+AGG + chr8_1:78617905-78617924 Msa1216700:intron 45.0%
! TGTCATTTGGGTAAGGTCGT+TGG - chr8_1:78618221-78618240 None:intergenic 45.0%
TTCCTACATACCTATCCGCA+GGG + chr8_1:78618275-78618294 Msa1216700:CDS 45.0%
ATCATGCTGCAAAATCCCTG+CGG - chr8_1:78618293-78618312 None:intergenic 45.0%
TAGTTCCATAGTCGTGTGAC+CGG + chr8_1:78618324-78618343 Msa1216700:intron 45.0%
! GTACTTGACCAGAAAGGTGT+GGG + chr8_1:78618642-78618661 Msa1216700:CDS 45.0%
GTTGGAATATGTGGAGAGCA+TGG + chr8_1:78618841-78618860 Msa1216700:CDS 45.0%
TGGTGTATAAGACACTGGTG+TGG + chr8_1:78619436-78619455 Msa1216700:three_prime_UTR 45.0%
TCACTTCATGGACCCATGTT+CGG - chr8_1:78619576-78619595 None:intergenic 45.0%
!! AAAATAAAATAAAAAACAAA+GGG + chr8_1:78611538-78611557 Msa1216700:intron 5.0%
!! TATATATATATGTTAAATTT+AGG + chr8_1:78613962-78613981 Msa1216700:intron 5.0%
!! TATTCTTAATATTTATATTA+TGG + chr8_1:78618771-78618790 Msa1216700:intron 5.0%
!!! TTTTTTTTTTATTAATGATA+TGG - chr8_1:78619196-78619215 None:intergenic 5.0%
!! TTGTGGTGGGTGGTGTTGTT+GGG - chr8_1:78610679-78610698 None:intergenic 50.0%
!! TTTGTGGTGGGTGGTGTTGT+TGG - chr8_1:78610680-78610699 None:intergenic 50.0%
ACTCTATCTTCAGGCGGGAT+CGG - chr8_1:78611326-78611345 None:intergenic 50.0%
TCCCGCCTGAAGATAGAGTT+TGG + chr8_1:78611327-78611346 Msa1216700:intron 50.0%
GCCAAACTCTATCTTCAGGC+GGG - chr8_1:78611331-78611350 None:intergenic 50.0%
TTCAACCCGCCCAAAATAGC+AGG + chr8_1:78611408-78611427 Msa1216700:intron 50.0%
ATAAAACAGGGTCGAGCGTC+TGG - chr8_1:78611447-78611466 None:intergenic 50.0%
GGGAGCCAACTTAGCAGAAA+TGG + chr8_1:78612775-78612794 Msa1216700:CDS 50.0%
CCTCCCACAAACCATTTGGT+AGG - chr8_1:78612880-78612899 None:intergenic 50.0%
! CCTACCAAATGGTTTGTGGG+AGG + chr8_1:78612877-78612896 Msa1216700:CDS 50.0%
!! GAGAGGAGGAGAGGTTTTGA+AGG - chr8_1:78612959-78612978 None:intergenic 50.0%
TGTGTCCATCATTCCAGGCA+TGG - chr8_1:78613681-78613700 None:intergenic 50.0%
TGATGAAGTGGTTGCTGGGT+TGG + chr8_1:78613721-78613740 Msa1216700:CDS 50.0%
!! GCTGGGTTGGCTTCAAAAAG+TGG + chr8_1:78613734-78613753 Msa1216700:CDS 50.0%
GAGTGTCTACCTCGAAGCTA+AGG + chr8_1:78614106-78614125 Msa1216700:CDS 50.0%
TAGGGAGAGGATGTAGTTGC+CGG + chr8_1:78614640-78614659 Msa1216700:intron 50.0%
AGGATGTAGTTGCCGGAATC+AGG + chr8_1:78614647-78614666 Msa1216700:CDS 50.0%
AAGGACAAAGTGGTTGCCAC+TGG + chr8_1:78615406-78615425 Msa1216700:CDS 50.0%
GAGAAACCACACAAGTGGGT+CGG - chr8_1:78615716-78615735 None:intergenic 50.0%
!!! CGGTGTTTTGGTCACCTATG+TGG + chr8_1:78615758-78615777 Msa1216700:intron 50.0%
! GTTCTGGACTCACACTCGAA+AGG + chr8_1:78615827-78615846 Msa1216700:intron 50.0%
AAGGACAGAGACAAGTCCAG+AGG + chr8_1:78616132-78616151 Msa1216700:CDS 50.0%
GAGACAAGTCCAGAGGATGT+CGG + chr8_1:78616139-78616158 Msa1216700:CDS 50.0%
AGACAAGTCCAGAGGATGTC+GGG + chr8_1:78616140-78616159 Msa1216700:CDS 50.0%
GTTGGCATCTTGACAGCTAG+AGG + chr8_1:78616178-78616197 Msa1216700:CDS 50.0%
ACAACACTTTCCCCATCCAC+GGG - chr8_1:78616233-78616252 None:intergenic 50.0%
CACAACACTTTCCCCATCCA+CGG - chr8_1:78616234-78616253 None:intergenic 50.0%
!! TGGGGAAAGTGTTGTGTGTC+TGG + chr8_1:78616238-78616257 Msa1216700:CDS 50.0%
GTTGAATGGATCCACAGGTG+AGG + chr8_1:78616429-78616448 Msa1216700:CDS 50.0%
TCCACAGGTGAGGTGATACT+TGG + chr8_1:78616439-78616458 Msa1216700:CDS 50.0%
TCCAAGTATCACCTCACCTG+TGG - chr8_1:78616443-78616462 None:intergenic 50.0%
AAAGCAGGCACTTTCTCCTC+CGG + chr8_1:78616462-78616481 Msa1216700:CDS 50.0%
AAATCATCGCTTAGAGCCGG+AGG - chr8_1:78616481-78616500 None:intergenic 50.0%
!! TCCGGCTCTAAGCGATGATT+TGG + chr8_1:78616480-78616499 Msa1216700:CDS 50.0%
CCCAAATCATCGCTTAGAGC+CGG - chr8_1:78616484-78616503 None:intergenic 50.0%
!! CCGGCTCTAAGCGATGATTT+GGG + chr8_1:78616481-78616500 Msa1216700:CDS 50.0%
CAAAACGGTGCGCAAGGAAT+TGG + chr8_1:78616687-78616706 Msa1216700:CDS 50.0%
CGCAAGGAATTGGACTTTGC+AGG + chr8_1:78616697-78616716 Msa1216700:CDS 50.0%
CAGCCACGAAAACCAAGCAT+TGG - chr8_1:78617175-78617194 None:intergenic 50.0%
GCCTGCATCTCAGTCAATTC+AGG - chr8_1:78617558-78617577 None:intergenic 50.0%
TAGCAGCTTGGAAAACGGCA+CGG - chr8_1:78617581-78617600 None:intergenic 50.0%
TCTGCAACTAGTGCAGCTCT+TGG - chr8_1:78618032-78618051 None:intergenic 50.0%
AGCTGCACTAGTTGCAGATG+AGG + chr8_1:78618034-78618053 Msa1216700:CDS 50.0%
CTTCCTACATACCTATCCGC+AGG + chr8_1:78618274-78618293 Msa1216700:CDS 50.0%
ATCCCTGCGGATAGGTATGT+AGG - chr8_1:78618280-78618299 None:intergenic 50.0%
AATCACCGGTCACACGACTA+TGG - chr8_1:78618332-78618351 None:intergenic 50.0%
GGATAAGTGGGAGCTGGAAA+TGG + chr8_1:78618493-78618512 Msa1216700:intron 50.0%
CTGCAGGTACTTGACCAGAA+AGG + chr8_1:78618636-78618655 Msa1216700:intron 50.0%
GGTACTTGACCAGAAAGGTG+TGG + chr8_1:78618641-78618660 Msa1216700:intron 50.0%
! TGAGTTGACCCACACCTTTC+TGG - chr8_1:78618653-78618672 None:intergenic 50.0%
! GGAATATGTGGAGAGCATGG+CGG + chr8_1:78618844-78618863 Msa1216700:CDS 50.0%
! GAATATGTGGAGAGCATGGC+GGG + chr8_1:78618845-78618864 Msa1216700:CDS 50.0%
! AATATGTGGAGAGCATGGCG+GGG + chr8_1:78618846-78618865 Msa1216700:CDS 50.0%
GCTGCTGCAAGTCTAGCAAT+CGG - chr8_1:78619081-78619100 None:intergenic 50.0%
GCAGCTCAATTTGCAGCGTA+AGG + chr8_1:78619096-78619115 Msa1216700:CDS 50.0%
!! TGTGGTGGGTGGTGTTGTTG+GGG - chr8_1:78610678-78610697 None:intergenic 55.0%
TCTATCTTCAGGCGGGATCG+GGG - chr8_1:78611324-78611343 None:intergenic 55.0%
CTCTATCTTCAGGCGGGATC+GGG - chr8_1:78611325-78611344 None:intergenic 55.0%
TGATCAGCTCCTACACCCAC+AGG + chr8_1:78615042-78615061 Msa1216700:CDS 55.0%
CTGCTGAAGCTGCCGAACAA+TGG + chr8_1:78615473-78615492 Msa1216700:CDS 55.0%
GCCGAACAATGGCATGCACA+AGG + chr8_1:78615484-78615503 Msa1216700:CDS 55.0%
CCACACAAGTGGGTCGGAAT+TGG - chr8_1:78615710-78615729 None:intergenic 55.0%
CCAATTCCGACCCACTTGTG+TGG + chr8_1:78615707-78615726 Msa1216700:intron 55.0%
ACCTATGCTCCCCCTAAAGC+GGG - chr8_1:78615796-78615815 None:intergenic 55.0%
CACCTATGCTCCCCCTAAAG+CGG - chr8_1:78615797-78615816 None:intergenic 55.0%
GACAAGTCCAGAGGATGTCG+GGG + chr8_1:78616141-78616160 Msa1216700:CDS 55.0%
ACAAGTCCAGAGGATGTCGG+GGG + chr8_1:78616142-78616161 Msa1216700:CDS 55.0%
GGCATCTTGACAGCTAGAGG+TGG + chr8_1:78616181-78616200 Msa1216700:CDS 55.0%
TGCTGTTGTAGCCCGTGGAT+GGG + chr8_1:78616219-78616238 Msa1216700:CDS 55.0%
GCTAGACAAAACGGTGCGCA+AGG + chr8_1:78616681-78616700 Msa1216700:CDS 55.0%
!! TGCTTGGTTTTCGTGGCTGC+AGG + chr8_1:78617176-78617195 Msa1216700:CDS 55.0%
GTAGGGTTAGAGGAGGGACA+TGG + chr8_1:78617301-78617320 Msa1216700:intron 55.0%
!! AGAGGAGGGACATGGTGGAT+TGG + chr8_1:78617309-78617328 Msa1216700:intron 55.0%
!! GAGGAGGGACATGGTGGATT+GGG + chr8_1:78617310-78617329 Msa1216700:intron 55.0%
!! AGGAGGGACATGGTGGATTG+GGG + chr8_1:78617311-78617330 Msa1216700:intron 55.0%
AGCAGCTTGGAAAACGGCAC+GGG - chr8_1:78617580-78617599 None:intergenic 55.0%
GCTGCAAAATCCCTGCGGAT+AGG - chr8_1:78618288-78618307 None:intergenic 55.0%
GGTGTAGGATAAGTGGGAGC+TGG + chr8_1:78618487-78618506 Msa1216700:intron 55.0%
TATCTTCAGGCGGGATCGGG+GGG - chr8_1:78611322-78611341 None:intergenic 60.0%
CTATCTTCAGGCGGGATCGG+GGG - chr8_1:78611323-78611342 None:intergenic 60.0%
GGGTTGCCGTTAGCACCTGA+GGG - chr8_1:78614143-78614162 None:intergenic 60.0%
AGGGGATGCAGGCAAACCAG+TGG - chr8_1:78615425-78615444 None:intergenic 60.0%
!! ACTGGTTTGCCTGCATCCCC+TGG + chr8_1:78615424-78615443 Msa1216700:CDS 60.0%
CATCCCCTGGAGCTGCAGTT+GGG + chr8_1:78615437-78615456 Msa1216700:CDS 60.0%
!! TCCCGCTTTAGGGGGAGCAT+AGG + chr8_1:78615792-78615811 Msa1216700:intron 60.0%
! GGGGGCATGCATTCAGCTGT+TGG + chr8_1:78616160-78616179 Msa1216700:CDS 60.0%
CATGCTGCTGTTGTAGCCCG+TGG + chr8_1:78616214-78616233 Msa1216700:CDS 60.0%
CTGCTGTTGTAGCCCGTGGA+TGG + chr8_1:78616218-78616237 Msa1216700:CDS 60.0%
GCTGTTGTAGCCCGTGGATG+GGG + chr8_1:78616220-78616239 Msa1216700:CDS 60.0%
GGGTTAGAGGAGGGACATGG+TGG + chr8_1:78617304-78617323 Msa1216700:intron 60.0%
TCCACTCGTCGGTACACCTC+AGG + chr8_1:78617647-78617666 Msa1216700:CDS 60.0%
GAGCGCACAGAGAGGAGGAG+AGG - chr8_1:78612968-78612987 None:intergenic 65.0%
CTCCTCCTCTCTGTGCGCTC+TGG + chr8_1:78612968-78612987 Msa1216700:CDS 65.0%
CACCAGAGCGCACAGAGAGG+AGG - chr8_1:78612973-78612992 None:intergenic 65.0%
CAGCACCAGAGCGCACAGAG+AGG - chr8_1:78612976-78612995 None:intergenic 65.0%
! CTCTGTGCGCTCTGGTGCTG+CGG + chr8_1:78612976-78612995 Msa1216700:CDS 65.0%
GGGGTTGCCGTTAGCACCTG+AGG - chr8_1:78614144-78614163 None:intergenic 65.0%
ACTGCAGCTCCAGGGGATGC+AGG - chr8_1:78615436-78615455 None:intergenic 65.0%
GCATCCCCTGGAGCTGCAGT+TGG + chr8_1:78615436-78615455 Msa1216700:CDS 65.0%
CTGCCCAACTGCAGCTCCAG+GGG - chr8_1:78615443-78615462 None:intergenic 65.0%
CCTGCCCAACTGCAGCTCCA+GGG - chr8_1:78615444-78615463 None:intergenic 65.0%
ACCTGCCCAACTGCAGCTCC+AGG - chr8_1:78615445-78615464 None:intergenic 65.0%
TGCATGCCCCCGACATCCTC+TGG - chr8_1:78616151-78616170 None:intergenic 65.0%
! GCCTGAGGTGTACCGACGAG+TGG - chr8_1:78617651-78617670 None:intergenic 65.0%
CCCTGGAGCTGCAGTTGGGC+AGG + chr8_1:78615441-78615460 Msa1216700:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 78610337 78619626 78610337 ID=Msa1216700;Name=Msa1216700
chr8_1 mRNA 78610337 78619626 78610337 ID=Msa1216700-mRNA-1;Parent=Msa1216700;Name=Msa1216700-mRNA-1;_AED=0.11;_eAED=0.11;_QI=130|1|1|1|1|1|19|510|951
chr8_1 exon 78610337 78610703 78610337 ID=Msa1216700-mRNA-1:exon:27213;Parent=Msa1216700-mRNA-1
chr8_1 exon 78612557 78612613 78612557 ID=Msa1216700-mRNA-1:exon:27214;Parent=Msa1216700-mRNA-1
chr8_1 exon 78612764 78612997 78612764 ID=Msa1216700-mRNA-1:exon:27215;Parent=Msa1216700-mRNA-1
chr8_1 exon 78613674 78613811 78613674 ID=Msa1216700-mRNA-1:exon:27216;Parent=Msa1216700-mRNA-1
chr8_1 exon 78613984 78614146 78613984 ID=Msa1216700-mRNA-1:exon:27217;Parent=Msa1216700-mRNA-1
chr8_1 exon 78614244 78614479 78614244 ID=Msa1216700-mRNA-1:exon:27218;Parent=Msa1216700-mRNA-1
chr8_1 exon 78614643 78614771 78614643 ID=Msa1216700-mRNA-1:exon:27219;Parent=Msa1216700-mRNA-1
chr8_1 exon 78614884 78615063 78614884 ID=Msa1216700-mRNA-1:exon:27220;Parent=Msa1216700-mRNA-1
chr8_1 exon 78615385 78615522 78615385 ID=Msa1216700-mRNA-1:exon:27221;Parent=Msa1216700-mRNA-1
chr8_1 exon 78616130 78616294 78616130 ID=Msa1216700-mRNA-1:exon:27222;Parent=Msa1216700-mRNA-1
chr8_1 exon 78616382 78616543 78616382 ID=Msa1216700-mRNA-1:exon:27223;Parent=Msa1216700-mRNA-1
chr8_1 exon 78616642 78616731 78616642 ID=Msa1216700-mRNA-1:exon:27224;Parent=Msa1216700-mRNA-1
chr8_1 exon 78616881 78617197 78616881 ID=Msa1216700-mRNA-1:exon:27225;Parent=Msa1216700-mRNA-1
chr8_1 exon 78617539 78617668 78617539 ID=Msa1216700-mRNA-1:exon:27226;Parent=Msa1216700-mRNA-1
chr8_1 exon 78617927 78618055 78617927 ID=Msa1216700-mRNA-1:exon:27227;Parent=Msa1216700-mRNA-1
chr8_1 exon 78618184 78618321 78618184 ID=Msa1216700-mRNA-1:exon:27228;Parent=Msa1216700-mRNA-1
chr8_1 exon 78618642 78618719 78618642 ID=Msa1216700-mRNA-1:exon:27229;Parent=Msa1216700-mRNA-1
chr8_1 exon 78618841 78618932 78618841 ID=Msa1216700-mRNA-1:exon:27230;Parent=Msa1216700-mRNA-1
chr8_1 exon 78619074 78619626 78619074 ID=Msa1216700-mRNA-1:exon:27231;Parent=Msa1216700-mRNA-1
chr8_1 five_prime_UTR 78610337 78610466 78610337 ID=Msa1216700-mRNA-1:five_prime_utr;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78610467 78610703 78610467 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78612557 78612613 78612557 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78612764 78612997 78612764 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78613674 78613811 78613674 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78613984 78614146 78613984 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78614244 78614479 78614244 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78614643 78614771 78614643 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78614884 78615063 78614884 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78615385 78615522 78615385 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78616130 78616294 78616130 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78616382 78616543 78616382 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78616642 78616731 78616642 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78616881 78617197 78616881 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78617539 78617668 78617539 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78617927 78618055 78617927 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78618184 78618321 78618184 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78618642 78618719 78618642 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78618841 78618932 78618841 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 CDS 78619074 78619116 78619074 ID=Msa1216700-mRNA-1:cds;Parent=Msa1216700-mRNA-1
chr8_1 three_prime_UTR 78619117 78619626 78619117 ID=Msa1216700-mRNA-1:three_prime_utr;Parent=Msa1216700-mRNA-1
Gene Sequence

>Msa1216700

ATGTCTACCATAGTAAGAGGCATAGTCATAAGGAACACATCAACATCAGATAATAGGATTTTCAAAGGGAACAAGAATGATGTTAGTGTTGGTGGGAGAAGAAGTACAAAGGTGCAGTGGAAGGAGTTGCAGTTACGGCTTACATCAACATGGAAAGCTAGAAGAACAAGTACATATCAGCCTTCAATTCGTTGCCAAACTATTCTTACCCCAACAACACCACCCACCACAAAAAAGAGAGTGTTCACTTTTGGCAAAGGTAAAAGTGAAGGAAACAAGGCCATGAAGTCCTTGTTGGGAGGAAAGGGAGCCAACTTAGCAGAAATGGCAACAATTGGTTTATCTGTGCCTCCTGGACTCACTATATCAACAGAAGCATGTCAAGAATATCAACAAAATGAAAAGAACCTACCAAATGGTTTGTGGGAGGAGATACTTGAAGGCCTTAGATTTGTTGAAAATGAAATGGAGGCCTTTCTTGGGAATCCTTCAAAACCTCTCCTCCTCTCTGTGCGCTCTGGTGCTGCGATTTCCATGCCTGGAATGATGGACACAGTTCTTAATCTTGGATTGAATGATGAAGTGGTTGCTGGGTTGGCTTCAAAAAGTGGAGAGCGGTTTGCTTACGATTCTTATAGACGTTTCTTAGACATGTTTGGAGGTGTTGTATTGGACATTCCACATTCATTGTTTGAGGAGAAATTGGAAAAGCTAAAGTATTCAAAAGGCGTTAAACATGACACTGATCTAACAGCCAACGATCTCAAAGATCTGGTTGAGCAGTACAAGAGTGTCTACCTCGAAGCTAAGGGAGAAAAGTTTCCCTCAGATCCAAAGAAGCAACTAGAATTAGCTGTTAAAGCTGTTTTCAATTCTTGGGATAGCCCAAGGGCTAATAAGTATAGGAGCATTAATCAGATAACTGGACTAGTGGGCACTGCCGTAAACATTCAATCCATGGTGTTTGGTAATATGGGAAATACTTCAGGAACTGGCGTTTTATTCACTAGAAATCCAAGCACTGGGGAAAAGAAACTTTATGGGGAGTTTCTCATTAATGCTCAGGGAGAGGATGTAGTTGCCGGAATCAGGACACCTGAAGATTTAGAGACCATGAAAACTTGCATGCCGGATGCTTATAAGGAACTTGAGGAGAATTGTAAGATTCTAGAGAATCATTACAAGGATATGATGGATATTGAGTTCACTGTTCAGGAAAATAGATTGTGGATGTTGCAATGTCGAAGTGGAAAACGTACTGGTAAAGGTGCAATCAAAATAGCTGTAGATATGGTCAATGAGGGGCTTGTTGATATTCGTTCTGCAATCAAGATGGTAGAGCCACAACATCTTGATCAGCTCCTACACCCACAGTTTGAGGATCCATCTAAGTACAAGGACAAAGTGGTTGCCACTGGTTTGCCTGCATCCCCTGGAGCTGCAGTTGGGCAGGTTGTGTTCACTGCTGAAGCTGCCGAACAATGGCATGCACAAGGAAAAAGTGCAATTTTGGTAAGGACAGAGACAAGTCCAGAGGATGTCGGGGGCATGCATTCAGCTGTTGGCATCTTGACAGCTAGAGGTGGTATGACATCTCATGCTGCTGTTGTAGCCCGTGGATGGGGAAAGTGTTGTGTGTCTGGTTGCTCCGACATCCAAATAAACGACCATGAAAAGGTGGTTGTAATTGGGGATAACGTAATATCAGAAGGAGAATGGATCTCGTTGAATGGATCCACAGGTGAGGTGATACTTGGAAAGCAGGCACTTTCTCCTCCGGCTCTAAGCGATGATTTGGGAACTTTCATGTCTTGGGCTGATGAAATAAGGAATCTGAAGGTTTTGGCAAATGCTGACACACCTGAAGATGCAATAGCAGCTAGACAAAACGGTGCGCAAGGAATTGGACTTTGCAGGACAGAACACATGTTTTTTGCTTCAGATGAAAGGATAAAGGCCGTGAGAATGATGATATTGGCTATTACGCAAGAACAGAGGAAAGCTGCACTTGATTTGTTGTTACCTTATCAAAGATCAGATTTTGAGGGAATTTTTCGAGCAATGGATGGTCTCCCAGTAACAATCCGGTTGTTAGATCCTCCACTTCATGAATTTCTTCCTGAAGGTGATTTAAATGAAATTGTTGGTGAACTAACTTCTCAGACAGGCATGAAAGAAGAAGAAATAGTCTCTAGGATAGAAAAACTCTTTGAAGTTAATCCAATGCTTGGTTTTCGTGGCTGCAGGTTGGGAATATCATATCCTGAATTGACTGAGATGCAGGCCCGTGCCGTTTTCCAAGCTGCTATTTCAGTGAGTAGCCATGGTATTACAGTCCTTCCAGAGATAATGGTTCCACTCGTCGGTACACCTCAGGAATTAAGACATCAAGTGAGTTTAATAAGGAACGTTGCTGAGAAAGTGTTCTCTGAGATGGGCTCTTCATTAAGCTATAAGGTTGGAACTATGATAGAAGTTCCAAGAGCTGCACTAGTTGCAGATGAGATTGCAAATGAAGCCGATTTCTTTTCATTTGGAACCAACGACCTTACCCAAATGACATTTGGTTACAGTAGAGATGATGTTAGTAAGTTTCTTCCTACATACCTATCCGCAGGGATTTTGCAGCATGATCCATTTGAGGTACTTGACCAGAAAGGTGTGGGTCAACTCATCAAAATTTGCACAGAAAAGGGTCGTGCTGCTAAACCAAATTTGAAGGTTGGAATATGTGGAGAGCATGGCGGGGAGCCTTCTTCTGTTGCATTCTTTGCTCAACTTGGACTTGACTATGTCTCATGTTCACCATTCAGGGTTCCGATTGCTAGACTTGCAGCAGCTCAATTTGCAGCGTAA
Protein sequence

>Msa1216700

MSTIVRGIVIRNTSTSDNRIFKGNKNDVSVGGRRSTKVQWKELQLRLTSTWKARRTSTYQPSIRCQTILTPTTPPTTKKRVFTFGKGKSEGNKAMKSLLGGKGANLAEMATIGLSVPPGLTISTEACQEYQQNEKNLPNGLWEEILEGLRFVENEMEAFLGNPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLASKSGERFAYDSYRRFLDMFGGVVLDIPHSLFEEKLEKLKYSKGVKHDTDLTANDLKDLVEQYKSVYLEAKGEKFPSDPKKQLELAVKAVFNSWDSPRANKYRSINQITGLVGTAVNIQSMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLETMKTCMPDAYKELEENCKILENHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAIKIAVDMVNEGLVDIRSAIKMVEPQHLDQLLHPQFEDPSKYKDKVVATGLPASPGAAVGQVVFTAEAAEQWHAQGKSAILVRTETSPEDVGGMHSAVGILTARGGMTSHAAVVARGWGKCCVSGCSDIQINDHEKVVVIGDNVISEGEWISLNGSTGEVILGKQALSPPALSDDLGTFMSWADEIRNLKVLANADTPEDAIAARQNGAQGIGLCRTEHMFFASDERIKAVRMMILAITQEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLNEIVGELTSQTGMKEEEIVSRIEKLFEVNPMLGFRGCRLGISYPELTEMQARAVFQAAISVSSHGITVLPEIMVPLVGTPQELRHQVSLIRNVAEKVFSEMGSSLSYKVGTMIEVPRAALVADEIANEADFFSFGTNDLTQMTFGYSRDDVSKFLPTYLSAGILQHDPFEVLDQKGVGQLIKICTEKGRAAKPNLKVGICGEHGGEPSSVAFFAQLGLDYVSCSPFRVPIARLAAAQFAA*