Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243010 | XP_003628404.1 | 94.521 | 219 | 12 | 0 | 1 | 219 | 1 | 219 | 2.08e-149 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243010 | sp|P49332|GSTXC_TOBAC | 69.725 | 218 | 65 | 1 | 3 | 219 | 4 | 221 | 1.04e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa1243010 | 0.808455 | 3.070586e-50 | -8.615850e-47 |
| Msa0008340 | Msa1243010 | 0.824082 | 9.786839e-54 | -8.615850e-47 |
| Msa0011720 | Msa1243010 | 0.832497 | 9.140172e-56 | -8.615850e-47 |
| Msa0032370 | Msa1243010 | 0.802451 | 5.575672e-49 | -8.615850e-47 |
| Msa0046100 | Msa1243010 | 0.822430 | 2.378470e-53 | -8.615850e-47 |
| Msa0050430 | Msa1243010 | 0.804964 | 1.677817e-49 | -8.615850e-47 |
| Msa0050730 | Msa1243010 | 0.812219 | 4.732028e-51 | -8.615850e-47 |
| Msa0050760 | Msa1243010 | 0.815121 | 1.087392e-51 | -8.615850e-47 |
| Msa0094100 | Msa1243010 | 0.802532 | 5.365095e-49 | -8.615850e-47 |
| Msa0096670 | Msa1243010 | 0.813382 | 2.632623e-51 | -8.615850e-47 |
| Msa0102750 | Msa1243010 | 0.820856 | 5.497711e-53 | -8.615850e-47 |
| Msa0105420 | Msa1243010 | 0.867493 | 1.314377e-65 | -8.615850e-47 |
| Msa0110970 | Msa1243010 | 0.802568 | 5.274651e-49 | -8.615850e-47 |
| Msa0114540 | Msa1243010 | -0.828716 | 7.701782e-55 | -8.615850e-47 |
| Msa0120330 | Msa1243010 | 0.812147 | 4.906501e-51 | -8.615850e-47 |
| Msa0620810 | Msa1243010 | 0.823728 | 1.185021e-53 | -8.615850e-47 |
| Msa0670980 | Msa1243010 | 0.819271 | 1.267665e-52 | -8.615850e-47 |
| Msa0706370 | Msa1243010 | 0.804249 | 2.364835e-49 | -8.615850e-47 |
| Msa0716560 | Msa1243010 | 0.812201 | 4.775359e-51 | -8.615850e-47 |
| Msa0757950 | Msa1243010 | 0.821181 | 4.626878e-53 | -8.615850e-47 |
| Msa0781570 | Msa1243010 | 0.806133 | 9.536063e-50 | -8.615850e-47 |
| Msa0810480 | Msa1243010 | 0.809622 | 1.727397e-50 | -8.615850e-47 |
| Msa0124340 | Msa1243010 | 0.820424 | 6.908637e-53 | -8.615850e-47 |
| Msa0140910 | Msa1243010 | 0.803096 | 4.103586e-49 | -8.615850e-47 |
| Msa0151690 | Msa1243010 | 0.809462 | 1.869637e-50 | -8.615850e-47 |
| Msa0168100 | Msa1243010 | 0.808650 | 2.789895e-50 | -8.615850e-47 |
| Msa0172350 | Msa1243010 | 0.826110 | 3.246590e-54 | -8.615850e-47 |
| Msa0193650 | Msa1243010 | 0.821840 | 3.260208e-53 | -8.615850e-47 |
| Msa0196130 | Msa1243010 | -0.820715 | 5.923626e-53 | -8.615850e-47 |
| Msa0217400 | Msa1243010 | 0.805910 | 1.062424e-49 | -8.615850e-47 |
| Msa0222920 | Msa1243010 | 0.834568 | 2.780240e-56 | -8.615850e-47 |
| Msa0227510 | Msa1243010 | 0.820499 | 6.641200e-53 | -8.615850e-47 |
| Msa0233190 | Msa1243010 | 0.804052 | 2.598985e-49 | -8.615850e-47 |
| Msa1228210 | Msa1243010 | 0.801189 | 1.012627e-48 | -8.615850e-47 |
| Msa1236100 | Msa1243010 | 0.824468 | 7.941859e-54 | -8.615850e-47 |
| Msa1237030 | Msa1243010 | 0.835069 | 2.079599e-56 | -8.615850e-47 |
| Msa1243010 | Msa1243040 | 0.836623 | 8.397661e-57 | -8.615850e-47 |
| Msa1243010 | Msa1264020 | 0.804027 | 2.629996e-49 | -8.615850e-47 |
| Msa1243010 | Msa1265070 | 0.816308 | 5.914412e-52 | -8.615850e-47 |
| Msa1243010 | Msa1269080 | 0.807542 | 4.803564e-50 | -8.615850e-47 |
| Msa1243010 | Msa1271300 | 0.802198 | 6.285911e-49 | -8.615850e-47 |
| Msa1243010 | Msa1280130 | 0.811208 | 7.853505e-51 | -8.615850e-47 |
| Msa1243010 | Msa1283990 | 0.822932 | 1.817655e-53 | -8.615850e-47 |
| Msa1243010 | Msa1284490 | 0.865572 | 5.358027e-65 | -8.615850e-47 |
| Msa1243010 | Msa1285730 | 0.802275 | 6.059759e-49 | -8.615850e-47 |
| Msa1243010 | Msa1318120 | 0.804569 | 2.028458e-49 | -8.615850e-47 |
| Msa1243010 | Msa1323060 | 0.819792 | 9.644203e-53 | -8.615850e-47 |
| Msa1243010 | Msa1362510 | 0.802204 | 6.267790e-49 | -8.615850e-47 |
| Msa1243010 | Msa1363590 | 0.810698 | 1.012984e-50 | -8.615850e-47 |
| Msa1243010 | Msa1363890 | 0.823980 | 1.034249e-53 | -8.615850e-47 |
| Msa1243010 | Msa1390310 | 0.824544 | 7.621637e-54 | -8.615850e-47 |
| Msa1243010 | Msa1395530 | 0.800117 | 1.674805e-48 | -8.615850e-47 |
| Msa1243010 | Msa1404540 | 0.813879 | 2.047180e-51 | -8.615850e-47 |
| Msa1243010 | Msa1408790 | 0.836452 | 9.283218e-57 | -8.615850e-47 |
| Msa1243010 | Msa1427760 | 0.823093 | 1.667206e-53 | -8.615850e-47 |
| Msa1243010 | Msa1431060 | 0.806931 | 6.472803e-50 | -8.615850e-47 |
| Msa1243010 | Msa1436040 | 0.828387 | 9.247584e-55 | -8.615850e-47 |
| Msa1243010 | Msa1440600 | 0.815787 | 7.729952e-52 | -8.615850e-47 |
| Msa1243010 | Msa1459180 | 0.808478 | 3.037532e-50 | -8.615850e-47 |
| Msa1243010 | Msa1465900 | 0.801912 | 7.198449e-49 | -8.615850e-47 |
| Msa1243010 | Msa1466460 | 0.800876 | 1.173146e-48 | -8.615850e-47 |
| Msa0392070 | Msa1243010 | 0.805118 | 1.557660e-49 | -8.615850e-47 |
| Msa0414950 | Msa1243010 | -0.815687 | 8.135964e-52 | -8.615850e-47 |
| Msa0437710 | Msa1243010 | 0.809561 | 1.780220e-50 | -8.615850e-47 |
| Msa0449760 | Msa1243010 | 0.810821 | 9.525104e-51 | -8.615850e-47 |
| Msa0449830 | Msa1243010 | 0.806927 | 6.486215e-50 | -8.615850e-47 |
| Msa0452960 | Msa1243010 | 0.803263 | 3.789122e-49 | -8.615850e-47 |
| Msa0993530 | Msa1243010 | 0.826157 | 3.165247e-54 | -8.615850e-47 |
| Msa0996080 | Msa1243010 | 0.826359 | 2.833418e-54 | -8.615850e-47 |
| Msa1008490 | Msa1243010 | 0.810371 | 1.191471e-50 | -8.615850e-47 |
| Msa1020710 | Msa1243010 | 0.823842 | 1.113891e-53 | -8.615850e-47 |
| Msa1026760 | Msa1243010 | 0.805850 | 1.094017e-49 | -8.615850e-47 |
| Msa1026790 | Msa1243010 | 0.808224 | 3.440525e-50 | -8.615850e-47 |
| Msa1040120 | Msa1243010 | 0.832648 | 8.387065e-56 | -8.615850e-47 |
| Msa1049010 | Msa1243010 | 0.822527 | 2.258074e-53 | -8.615850e-47 |
| Msa1056640 | Msa1243010 | 0.812920 | 3.324614e-51 | -8.615850e-47 |
| Msa1087470 | Msa1243010 | 0.832581 | 8.710703e-56 | -8.615850e-47 |
| Msa1092820 | Msa1243010 | 0.803297 | 3.729025e-49 | -8.615850e-47 |
| Msa1099030 | Msa1243010 | 0.813787 | 2.145028e-51 | -8.615850e-47 |
| Msa0238890 | Msa1243010 | 0.803941 | 2.741780e-49 | -8.615850e-47 |
| Msa0260810 | Msa1243010 | 0.806004 | 1.015197e-49 | -8.615850e-47 |
| Msa0264350 | Msa1243010 | 0.833268 | 5.879821e-56 | -8.615850e-47 |
| Msa0265820 | Msa1243010 | 0.818641 | 1.763071e-52 | -8.615850e-47 |
| Msa0267760 | Msa1243010 | 0.824824 | 6.545318e-54 | -8.615850e-47 |
| Msa0280900 | Msa1243010 | 0.804599 | 1.999199e-49 | -8.615850e-47 |
| Msa0296560 | Msa1243010 | 0.809106 | 2.229002e-50 | -8.615850e-47 |
| Msa0302450 | Msa1243010 | 0.806957 | 6.392164e-50 | -8.615850e-47 |
| Msa0311580 | Msa1243010 | 0.807761 | 4.316116e-50 | -8.615850e-47 |
| Msa0313990 | Msa1243010 | 0.825369 | 4.866172e-54 | -8.615850e-47 |
| Msa0315240 | Msa1243010 | 0.813004 | 3.187524e-51 | -8.615850e-47 |
| Msa0316850 | Msa1243010 | 0.807744 | 4.352258e-50 | -8.615850e-47 |
| Msa0320100 | Msa1243010 | 0.812874 | 3.404350e-51 | -8.615850e-47 |
| Msa0335040 | Msa1243010 | 0.830312 | 3.151827e-55 | -8.615850e-47 |
| Msa1151730 | Msa1243010 | 0.807508 | 4.884298e-50 | -8.615850e-47 |
| Msa1188890 | Msa1243010 | 0.849943 | 2.337332e-60 | -8.615850e-47 |
| Msa1188910 | Msa1243010 | 0.816368 | 5.733248e-52 | -8.615850e-47 |
| Msa0490300 | Msa1243010 | 0.803610 | 3.211207e-49 | -8.615850e-47 |
| Msa0490350 | Msa1243010 | 0.822463 | 2.337035e-53 | -8.615850e-47 |
| Msa0508200 | Msa1243010 | 0.822893 | 1.856271e-53 | -8.615850e-47 |
| Msa0509970 | Msa1243010 | 0.810332 | 1.214769e-50 | -8.615850e-47 |
| Msa0521880 | Msa1243010 | 0.805235 | 1.472426e-49 | -8.615850e-47 |
| Msa0526710 | Msa1243010 | 0.829835 | 4.120810e-55 | -8.615850e-47 |
| Msa0535060 | Msa1243010 | 0.801757 | 7.743511e-49 | -8.615850e-47 |
| Msa0535450 | Msa1243010 | 0.818599 | 1.801869e-52 | -8.615850e-47 |
| Msa0591770 | Msa1243010 | 0.811732 | 6.044213e-51 | -8.615850e-47 |
| Msa0850960 | Msa1243010 | 0.801215 | 1.000384e-48 | -8.615850e-47 |
| Msa0866120 | Msa1243010 | 0.819687 | 1.019239e-52 | -8.615850e-47 |
| Msa0890250 | Msa1243010 | 0.817225 | 3.682483e-52 | -8.615850e-47 |
| Msa0893810 | Msa1243010 | 0.813490 | 2.493502e-51 | -8.615850e-47 |
| Msa0896210 | Msa1243010 | 0.841501 | 4.573620e-58 | -8.615850e-47 |
| Msa0896220 | Msa1243010 | 0.847696 | 9.824178e-60 | -8.615850e-47 |
| Msa0907700 | Msa1243010 | 0.804553 | 2.043702e-49 | -8.615850e-47 |
| Msa0908170 | Msa1243010 | 0.815519 | 8.870848e-52 | -8.615850e-47 |
| Msa0922540 | Msa1243010 | 0.830536 | 2.778973e-55 | -8.615850e-47 |
| Msa0936270 | Msa1243010 | 0.803937 | 2.746121e-49 | -8.615850e-47 |
| Msa0937670 | Msa1243010 | 0.806195 | 9.256378e-50 | -8.615850e-47 |
| Msa0969570 | Msa1243010 | 0.811806 | 5.821480e-51 | -8.615850e-47 |
| Msa0969700 | Msa1243010 | 0.805090 | 1.579057e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243010 | MtrunA17_Chr8g0357241 | 94.521 | 219 | 12 | 0 | 1 | 219 | 1 | 219 | 1.91e-153 | 424 |
| Msa1243010 | MtrunA17_Chr8g0357211 | 94.521 | 219 | 12 | 0 | 1 | 219 | 1 | 219 | 5.91e-153 | 423 |
| Msa1243010 | MtrunA17_Chr2g0312681 | 65.753 | 219 | 75 | 0 | 1 | 219 | 1 | 219 | 2.74e-106 | 305 |
| Msa1243010 | MtrunA17_Chr2g0312771 | 65.753 | 219 | 75 | 0 | 1 | 219 | 1 | 219 | 6.00e-105 | 301 |
| Msa1243010 | MtrunA17_Chr2g0312751 | 66.210 | 219 | 74 | 0 | 1 | 219 | 1 | 219 | 8.90e-105 | 301 |
| Msa1243010 | MtrunA17_Chr2g0312691 | 65.297 | 219 | 76 | 0 | 1 | 219 | 1 | 219 | 4.35e-104 | 299 |
| Msa1243010 | MtrunA17_Chr2g0312781 | 65.421 | 214 | 74 | 0 | 1 | 214 | 18 | 231 | 5.09e-102 | 295 |
| Msa1243010 | MtrunA17_Chr2g0312731 | 59.817 | 219 | 88 | 0 | 1 | 219 | 1 | 219 | 7.65e-97 | 281 |
| Msa1243010 | MtrunA17_Chr2g0312711 | 63.014 | 219 | 80 | 1 | 1 | 219 | 1 | 218 | 9.51e-97 | 281 |
| Msa1243010 | MtrunA17_Chr2g0312791 | 61.009 | 218 | 83 | 2 | 1 | 216 | 1 | 218 | 8.66e-93 | 271 |
| Msa1243010 | MtrunA17_Chr3g0107731 | 55.814 | 215 | 95 | 0 | 5 | 219 | 10 | 224 | 1.22e-92 | 270 |
| Msa1243010 | MtrunA17_Chr2g0312811 | 60.185 | 216 | 84 | 1 | 1 | 214 | 1 | 216 | 3.51e-92 | 269 |
| Msa1243010 | MtrunA17_Chr3g0107741 | 55.300 | 217 | 97 | 0 | 3 | 219 | 8 | 224 | 7.01e-92 | 268 |
| Msa1243010 | MtrunA17_Chr2g0312721 | 57.416 | 209 | 89 | 0 | 1 | 209 | 1 | 209 | 5.36e-85 | 251 |
| Msa1243010 | MtrunA17_Chr4g0069471 | 64.481 | 183 | 62 | 2 | 1 | 182 | 22 | 202 | 1.79e-82 | 244 |
| Msa1243010 | MtrunA17_Chr5g0433801 | 50.935 | 214 | 103 | 2 | 2 | 214 | 4 | 216 | 2.67e-72 | 219 |
| Msa1243010 | MtrunA17_Chr1g0196661 | 39.901 | 203 | 117 | 3 | 11 | 209 | 10 | 211 | 1.59e-44 | 148 |
| Msa1243010 | MtrunA17_Chr4g0029341 | 39.906 | 213 | 123 | 3 | 1 | 209 | 1 | 212 | 2.71e-44 | 147 |
| Msa1243010 | MtrunA17_Chr5g0415411 | 40.724 | 221 | 116 | 6 | 2 | 210 | 3 | 220 | 2.89e-43 | 145 |
| Msa1243010 | MtrunA17_Chr7g0240681 | 38.636 | 220 | 128 | 5 | 3 | 217 | 6 | 223 | 4.05e-43 | 144 |
| Msa1243010 | MtrunA17_Chr5g0417011 | 35.071 | 211 | 130 | 2 | 2 | 205 | 5 | 215 | 4.71e-43 | 144 |
| Msa1243010 | MtrunA17_Chr4g0008781 | 38.278 | 209 | 124 | 4 | 3 | 208 | 7 | 213 | 4.92e-43 | 144 |
| Msa1243010 | MtrunA17_Chr7g0240641 | 38.532 | 218 | 126 | 5 | 3 | 217 | 6 | 218 | 5.72e-43 | 144 |
| Msa1243010 | MtrunA17_Chr7g0240631 | 37.156 | 218 | 129 | 5 | 3 | 217 | 6 | 218 | 9.70e-43 | 144 |
| Msa1243010 | MtrunA17_Chr7g0240691 | 40.952 | 210 | 118 | 4 | 3 | 208 | 36 | 243 | 2.24e-42 | 144 |
| Msa1243010 | MtrunA17_Chr8g0379581 | 35.780 | 218 | 137 | 2 | 2 | 217 | 3 | 219 | 2.60e-42 | 142 |
| Msa1243010 | MtrunA17_Chr3g0132581 | 47.929 | 169 | 86 | 2 | 1 | 168 | 1 | 168 | 1.03e-41 | 141 |
| Msa1243010 | MtrunA17_Chr7g0240611 | 44.624 | 186 | 98 | 5 | 3 | 187 | 6 | 187 | 4.50e-41 | 139 |
| Msa1243010 | MtrunA17_Chr1g0196721 | 41.089 | 202 | 114 | 3 | 11 | 208 | 9 | 209 | 3.80e-40 | 137 |
| Msa1243010 | MtrunA17_Chr4g0008791 | 39.698 | 199 | 115 | 4 | 4 | 199 | 7 | 203 | 6.05e-40 | 136 |
| Msa1243010 | MtrunA17_Chr1g0196691 | 38.605 | 215 | 118 | 5 | 4 | 209 | 28 | 237 | 5.05e-39 | 135 |
| Msa1243010 | MtrunA17_Chr7g0240671 | 46.667 | 165 | 83 | 4 | 1 | 162 | 1 | 163 | 1.58e-38 | 132 |
| Msa1243010 | MtrunA17_Chr8g0379561 | 39.459 | 185 | 109 | 2 | 3 | 185 | 5 | 188 | 2.04e-38 | 132 |
| Msa1243010 | MtrunA17_Chr7g0240531 | 39.234 | 209 | 117 | 6 | 13 | 217 | 16 | 218 | 2.87e-38 | 132 |
| Msa1243010 | MtrunA17_Chr8g0363751 | 40.404 | 198 | 109 | 5 | 7 | 195 | 8 | 205 | 5.02e-38 | 132 |
| Msa1243010 | MtrunA17_Chr1g0196711 | 40.099 | 202 | 116 | 4 | 11 | 208 | 10 | 210 | 5.38e-38 | 131 |
| Msa1243010 | MtrunA17_Chr7g0240541 | 37.981 | 208 | 121 | 5 | 13 | 217 | 16 | 218 | 8.86e-38 | 130 |
| Msa1243010 | MtrunA17_Chr6g0483141 | 39.614 | 207 | 113 | 6 | 19 | 216 | 16 | 219 | 9.69e-37 | 128 |
| Msa1243010 | MtrunA17_Chr7g0240561 | 36.073 | 219 | 130 | 6 | 3 | 217 | 6 | 218 | 1.46e-36 | 127 |
| Msa1243010 | MtrunA17_Chr7g0240511 | 38.942 | 208 | 114 | 7 | 13 | 217 | 16 | 213 | 2.75e-36 | 127 |
| Msa1243010 | MtrunA17_Chr7g0240551 | 37.019 | 208 | 123 | 5 | 13 | 217 | 16 | 218 | 6.94e-36 | 126 |
| Msa1243010 | MtrunA17_Chr1g0196771 | 36.073 | 219 | 132 | 5 | 3 | 216 | 2 | 217 | 9.76e-36 | 125 |
| Msa1243010 | MtrunA17_Chr7g0240651 | 46.296 | 162 | 82 | 4 | 3 | 161 | 6 | 165 | 1.92e-35 | 125 |
| Msa1243010 | MtrunA17_Chr1g0212301 | 38.119 | 202 | 115 | 4 | 7 | 201 | 6 | 204 | 1.98e-35 | 124 |
| Msa1243010 | MtrunA17_Chr7g0240581 | 40.741 | 189 | 105 | 5 | 3 | 187 | 6 | 191 | 2.86e-34 | 122 |
| Msa1243010 | MtrunA17_Chr7g0240661 | 38.278 | 209 | 120 | 5 | 3 | 208 | 6 | 208 | 1.05e-33 | 120 |
| Msa1243010 | MtrunA17_Chr8g0391631 | 42.763 | 152 | 80 | 4 | 7 | 151 | 24 | 175 | 1.11e-31 | 114 |
| Msa1243010 | MtrunA17_Chr7g0240521 | 37.234 | 188 | 113 | 4 | 3 | 187 | 13 | 198 | 1.81e-31 | 115 |
| Msa1243010 | MtrunA17_Chr2g0313561 | 66.667 | 72 | 24 | 0 | 47 | 118 | 1 | 72 | 4.11e-30 | 106 |
| Msa1243010 | MtrunA17_Chr5g0415421 | 45.205 | 73 | 38 | 1 | 28 | 98 | 11 | 83 | 3.51e-12 | 61.6 |
| Msa1243010 | MtrunA17_Chr7g0263221 | 28.169 | 213 | 135 | 8 | 10 | 216 | 32 | 232 | 6.10e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243010 | AT1G78380.1 | 64.815 | 216 | 76 | 0 | 1 | 216 | 1 | 216 | 6.46e-100 | 289 |
| Msa1243010 | AT1G78370.1 | 60.465 | 215 | 85 | 0 | 1 | 215 | 1 | 215 | 1.15e-96 | 281 |
| Msa1243010 | AT1G17180.1 | 60.274 | 219 | 87 | 0 | 1 | 219 | 1 | 219 | 8.46e-96 | 279 |
| Msa1243010 | AT1G17170.1 | 61.187 | 219 | 84 | 1 | 1 | 219 | 1 | 218 | 1.20e-95 | 278 |
| Msa1243010 | AT1G78340.1 | 61.682 | 214 | 82 | 0 | 1 | 214 | 1 | 214 | 3.03e-95 | 277 |
| Msa1243010 | AT1G78360.1 | 60.455 | 220 | 86 | 1 | 1 | 219 | 1 | 220 | 5.58e-94 | 274 |
| Msa1243010 | AT1G78320.1 | 60.280 | 214 | 85 | 0 | 1 | 214 | 1 | 214 | 8.00e-90 | 263 |
| Msa1243010 | AT1G17190.1 | 56.075 | 214 | 94 | 0 | 3 | 216 | 4 | 217 | 1.26e-86 | 255 |
| Msa1243010 | AT1G53680.1 | 52.752 | 218 | 101 | 2 | 4 | 219 | 7 | 224 | 5.38e-83 | 246 |
| Msa1243010 | AT3G43800.1 | 52.727 | 220 | 100 | 3 | 3 | 218 | 4 | 223 | 1.44e-74 | 225 |
| Msa1243010 | AT1G78320.2 | 51.402 | 214 | 77 | 1 | 1 | 214 | 1 | 187 | 4.10e-69 | 210 |
| Msa1243010 | AT3G09270.1 | 47.594 | 187 | 95 | 2 | 3 | 186 | 5 | 191 | 1.71e-47 | 156 |
| Msa1243010 | AT2G29420.1 | 39.189 | 222 | 121 | 6 | 2 | 217 | 7 | 220 | 5.05e-46 | 152 |
| Msa1243010 | AT1G10360.1 | 39.910 | 223 | 123 | 5 | 2 | 216 | 3 | 222 | 1.62e-43 | 146 |
| Msa1243010 | AT1G10370.1 | 38.426 | 216 | 125 | 4 | 2 | 209 | 3 | 218 | 1.71e-43 | 146 |
| Msa1243010 | AT1G74590.1 | 34.842 | 221 | 132 | 4 | 4 | 215 | 7 | 224 | 4.70e-43 | 145 |
| Msa1243010 | AT2G29460.1 | 41.148 | 209 | 117 | 4 | 3 | 207 | 6 | 212 | 2.46e-42 | 143 |
| Msa1243010 | AT1G59670.1 | 40.090 | 222 | 124 | 5 | 3 | 215 | 5 | 226 | 3.16e-41 | 140 |
| Msa1243010 | AT2G29490.1 | 40.097 | 207 | 119 | 3 | 3 | 205 | 6 | 211 | 5.32e-41 | 139 |
| Msa1243010 | AT1G59700.1 | 40.553 | 217 | 118 | 6 | 3 | 209 | 5 | 220 | 6.83e-41 | 139 |
| Msa1243010 | AT1G27140.1 | 40.976 | 205 | 111 | 4 | 15 | 209 | 17 | 221 | 7.32e-41 | 139 |
| Msa1243010 | AT2G29480.1 | 45.342 | 161 | 84 | 2 | 3 | 160 | 6 | 165 | 7.89e-41 | 139 |
| Msa1243010 | AT2G29470.1 | 37.963 | 216 | 127 | 5 | 7 | 217 | 10 | 223 | 1.37e-40 | 138 |
| Msa1243010 | AT2G29450.1 | 49.080 | 163 | 76 | 4 | 3 | 160 | 5 | 165 | 1.76e-40 | 138 |
| Msa1243010 | AT2G29440.1 | 47.879 | 165 | 74 | 4 | 3 | 160 | 5 | 164 | 2.34e-40 | 137 |
| Msa1243010 | AT1G27130.1 | 37.915 | 211 | 122 | 4 | 7 | 208 | 9 | 219 | 6.52e-40 | 137 |
| Msa1243010 | AT1G69920.1 | 36.771 | 223 | 125 | 6 | 7 | 218 | 37 | 254 | 3.97e-38 | 133 |
| Msa1243010 | AT5G62480.1 | 36.872 | 179 | 105 | 1 | 5 | 175 | 9 | 187 | 5.96e-38 | 132 |
| Msa1243010 | AT1G69930.1 | 34.762 | 210 | 130 | 3 | 7 | 209 | 15 | 224 | 1.27e-34 | 123 |
| Msa1243010 | AT5G62480.3 | 28.492 | 179 | 93 | 2 | 5 | 175 | 9 | 160 | 1.60e-20 | 86.3 |
| Msa1243010 | AT5G62480.2 | 28.492 | 179 | 94 | 2 | 5 | 175 | 9 | 161 | 2.02e-20 | 85.9 |
Find 58 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAGCTCAAGCAAGATTT+TGG | 0.160142 | 8_2:+27724256 | Msa1243010:CDS |
| ATGATAATGGATTCACAAAT+TGG | 0.203864 | 8_2:-27724171 | None:intergenic |
| TTGGAATGAACAAGACTTTC+AGG | 0.231404 | 8_2:-27723933 | None:intergenic |
| AGGATAGCATTGGCTGAAAA+AGG | 0.234872 | 8_2:+27724042 | Msa1243010:CDS |
| ACTTATTTGTATAACTATAT+TGG | 0.246318 | 8_2:-27725180 | None:intergenic |
| CTTGGAGACCAACCTTATTT+TGG | 0.247910 | 8_2:+27724839 | Msa1243010:CDS |
| GGAGTTGATTGAAGGCTTAA+AGG | 0.261757 | 8_2:+27724802 | Msa1243010:CDS |
| ACTGGAATCTTCTTGTGAAT+TGG | 0.280000 | 8_2:-27724129 | None:intergenic |
| CTTTGATCCCTTTCTATAGT+TGG | 0.290757 | 8_2:+27724891 | Msa1243010:CDS |
| TTTCTCATCAGCAACAGATT+TGG | 0.313491 | 8_2:-27725011 | None:intergenic |
| AATATACTCAACAATGATAA+TGG | 0.340946 | 8_2:-27724184 | None:intergenic |
| GATTCATTTGCAAAAGCATT+TGG | 0.343663 | 8_2:-27724107 | None:intergenic |
| ACAAAGCTTAATAGTCTTTG+TGG | 0.345688 | 8_2:-27723891 | None:intergenic |
| GTGATGTTGGAGGAAGGATA+TGG | 0.346197 | 8_2:+27724744 | Msa1243010:CDS |
| CTTGCTTGAGCTTTCTCATA+AGG | 0.355050 | 8_2:-27724249 | None:intergenic |
| GGCAGAAGAGTTGATATTAC+TGG | 0.367990 | 8_2:+27723987 | Msa1243010:CDS |
| CATAACATTATTTGAAAACC+TGG | 0.387180 | 8_2:-27725234 | None:intergenic |
| TTTCCCTTATGGATAAGAAC+TGG | 0.413273 | 8_2:-27724147 | None:intergenic |
| AAAGAGAGATGAGATTGAAT+TGG | 0.418834 | 8_2:+27724772 | Msa1243010:CDS |
| GTTGGACTGAGAAGACAGTT+TGG | 0.424177 | 8_2:+27725075 | Msa1243010:exon |
| GATTCCAGTTCTTATCCATA+AGG | 0.427078 | 8_2:+27724143 | Msa1243010:CDS |
| TTGAGTATATTGATGAGGTT+TGG | 0.428745 | 8_2:+27724196 | Msa1243010:CDS |
| ATGAATTTGTTGTTAACTAT+AGG | 0.433226 | 8_2:+27725041 | Msa1243010:CDS |
| AATGTGTCACCACCAAAATA+AGG | 0.439985 | 8_2:-27724851 | None:intergenic |
| GATGAATGGCTTAGTATGTT+TGG | 0.440493 | 8_2:+27724009 | Msa1243010:CDS |
| TGATGAGGTTTGGAAGGATA+AGG | 0.440755 | 8_2:+27724206 | Msa1243010:CDS |
| TGAGATTGAATTGGCAAAGA+AGG | 0.443100 | 8_2:+27724781 | Msa1243010:CDS |
| AATCACAGAGCTGAGAGAAT+TGG | 0.444079 | 8_2:-27723952 | None:intergenic |
| ATTCCAGTTCTTATCCATAA+GGG | 0.462545 | 8_2:+27724144 | Msa1243010:CDS |
| CTCTGAGAAATTGTACTTGT+TGG | 0.463822 | 8_2:+27725099 | Msa1243010:three_prime_UTR |
| AGTTGATATTACTGGATGAA+TGG | 0.469810 | 8_2:+27723995 | Msa1243010:CDS |
| CTATAGGAAGAGGTTTGAGT+TGG | 0.471565 | 8_2:+27725057 | Msa1243010:CDS |
| GCAAAGAAGGAGTTGATTGA+AGG | 0.480756 | 8_2:+27724794 | Msa1243010:CDS |
| TGATGTTGGAGGAAGGATAT+GGG | 0.485671 | 8_2:+27724745 | Msa1243010:CDS |
| TATAAAACCAACTATAGAAA+GGG | 0.488530 | 8_2:-27724898 | None:intergenic |
| AAGGAATTAGAGAATGTGCT+TGG | 0.497037 | 8_2:+27724821 | Msa1243010:CDS |
| AGTGTGATAAATTGATTGCT+TGG | 0.497575 | 8_2:+27724957 | Msa1243010:CDS |
| GTATAAAACCAACTATAGAA+AGG | 0.503827 | 8_2:-27724899 | None:intergenic |
| AAAATGCAGGTTGGTGATGT+TGG | 0.514979 | 8_2:+27724731 | Msa1243010:intron |
| GTGTGATAAATTGATTGCTT+GGG | 0.517830 | 8_2:+27724958 | Msa1243010:CDS |
| TCTGTGATTGCCTTTGACAA+TGG | 0.524255 | 8_2:+27723966 | Msa1243010:exon |
| AGGGATTAAGTATGAGTACA+AGG | 0.524364 | 8_2:+27724062 | Msa1243010:CDS |
| AACCACTTAGCAACAAAGAA+AGG | 0.531910 | 8_2:-27725265 | None:intergenic |
| AACTCTTCTGCCATTGTCAA+AGG | 0.533987 | 8_2:-27723976 | None:intergenic |
| TTGTTGTTAACTATAGGAAG+AGG | 0.543349 | 8_2:+27725047 | Msa1243010:CDS |
| GTATATTGATGAGGTTTGGA+AGG | 0.548215 | 8_2:+27724200 | Msa1243010:CDS |
| GGCAAAGAGATGCAAGCAAA+GGG | 0.548622 | 8_2:+27724979 | Msa1243010:CDS |
| GTTGGAGGAAGGATATGGGC+TGG | 0.551186 | 8_2:+27724749 | Msa1243010:CDS |
| ATCTGTTGCTGATGAGAAAG+AGG | 0.559207 | 8_2:+27725015 | Msa1243010:CDS |
| GTATGTTTGGCATGAGAGCA+AGG | 0.570950 | 8_2:+27724022 | Msa1243010:CDS |
| TTTATGCAACTTCAGAGTTG+AGG | 0.573077 | 8_2:+27724931 | Msa1243010:CDS |
| CATGAGAGCAAGGATAGCAT+TGG | 0.573949 | 8_2:+27724032 | Msa1243010:CDS |
| GGGCAAAGAGATGCAAGCAA+AGG | 0.586185 | 8_2:+27724978 | Msa1243010:CDS |
| CATTGTTGAGTATATTGATG+AGG | 0.586356 | 8_2:+27724191 | Msa1243010:CDS |
| GCTTTCTCATAAGGATCTGA+CGG | 0.603224 | 8_2:-27724240 | None:intergenic |
| ATGCAGGTTGGTGATGTTGG+AGG | 0.604533 | 8_2:+27724734 | Msa1243010:intron |
| TGTCACCACCAAAATAAGGT+TGG | 0.621870 | 8_2:-27724847 | None:intergenic |
| AGGTTGGTGATGTTGGAGGA+AGG | 0.655636 | 8_2:+27724738 | Msa1243010:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAAAGTTTTCATATAA+TGG | + | chr8_2:27723860-27723879 | Msa1243010:five_prime_UTR | 15.0% |
| !! | TAAAAATATGGTAAAAACTT+TGG | - | chr8_2:27724320-27724339 | None:intergenic | 15.0% |
| !! | TAATGAATTAAATAACATGA+TGG | + | chr8_2:27724455-27724474 | Msa1243010:intron | 15.0% |
| !! | ACTTATTTGTATAACTATAT+TGG | - | chr8_2:27725183-27725202 | None:intergenic | 15.0% |
| !!! | ATGTTAAAGTTTTCATATAA+TGG | + | chr8_2:27723860-27723879 | Msa1243010:five_prime_UTR | 15.0% |
| !! | TAAAAATATGGTAAAAACTT+TGG | - | chr8_2:27724320-27724339 | None:intergenic | 15.0% |
| !! | TAATGAATTAAATAACATGA+TGG | + | chr8_2:27724455-27724474 | Msa1243010:intron | 15.0% |
| !! | ACTTATTTGTATAACTATAT+TGG | - | chr8_2:27725183-27725202 | None:intergenic | 15.0% |
| !! | AATATACTCAACAATGATAA+TGG | - | chr8_2:27724187-27724206 | None:intergenic | 20.0% |
| !! | AGAGAAAACAATAAAAAAGA+AGG | - | chr8_2:27724484-27724503 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTCTAATATTCAA+TGG | + | chr8_2:27724493-27724512 | Msa1243010:intron | 20.0% |
| !! | TATCCATATTATTAAAGACT+AGG | + | chr8_2:27724653-27724672 | Msa1243010:intron | 20.0% |
| !! | TATAAAACCAACTATAGAAA+GGG | - | chr8_2:27724901-27724920 | None:intergenic | 20.0% |
| !!! | ATGAATTTGTTGTTAACTAT+AGG | + | chr8_2:27725041-27725060 | Msa1243010:CDS | 20.0% |
| !! | AATATACTCAACAATGATAA+TGG | - | chr8_2:27724187-27724206 | None:intergenic | 20.0% |
| !! | AGAGAAAACAATAAAAAAGA+AGG | - | chr8_2:27724484-27724503 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTCTAATATTCAA+TGG | + | chr8_2:27724493-27724512 | Msa1243010:intron | 20.0% |
| !! | TATCCATATTATTAAAGACT+AGG | + | chr8_2:27724653-27724672 | Msa1243010:intron | 20.0% |
| !! | TATAAAACCAACTATAGAAA+GGG | - | chr8_2:27724901-27724920 | None:intergenic | 20.0% |
| !!! | ATGAATTTGTTGTTAACTAT+AGG | + | chr8_2:27725041-27725060 | Msa1243010:CDS | 20.0% |
| !!! | ATGATAATGGATTCACAAAT+TGG | - | chr8_2:27724174-27724193 | None:intergenic | 25.0% |
| !! | ATTTTTACTTATTTCCTGCT+AGG | - | chr8_2:27724343-27724362 | None:intergenic | 25.0% |
| !!! | GTATTGTTTTTGCTTTTGAA+TGG | + | chr8_2:27724420-27724439 | Msa1243010:intron | 25.0% |
| ! | CTTCATATTTCATCAATGAA+TGG | + | chr8_2:27724609-27724628 | Msa1243010:intron | 25.0% |
| ! | GGATTTATCATTCATCTTAT+TGG | + | chr8_2:27724630-27724649 | Msa1243010:intron | 25.0% |
| !! | CAACCTAGTCTTTAATAATA+TGG | - | chr8_2:27724659-27724678 | None:intergenic | 25.0% |
| ! | GTATAAAACCAACTATAGAA+AGG | - | chr8_2:27724902-27724921 | None:intergenic | 25.0% |
| !! | TTCTTTTTCTATTAGTGCTT+TGG | + | chr8_2:27725156-27725175 | Msa1243010:three_prime_UTR | 25.0% |
| !! | TATAGTTATGCAAATTTTCC+AGG | + | chr8_2:27725216-27725235 | Msa1243010:three_prime_UTR | 25.0% |
| ! | CATAACATTATTTGAAAACC+TGG | - | chr8_2:27725237-27725256 | None:intergenic | 25.0% |
| !!! | ATGATAATGGATTCACAAAT+TGG | - | chr8_2:27724174-27724193 | None:intergenic | 25.0% |
| !! | ATTTTTACTTATTTCCTGCT+AGG | - | chr8_2:27724343-27724362 | None:intergenic | 25.0% |
| !!! | GTATTGTTTTTGCTTTTGAA+TGG | + | chr8_2:27724420-27724439 | Msa1243010:intron | 25.0% |
| ! | CTTCATATTTCATCAATGAA+TGG | + | chr8_2:27724609-27724628 | Msa1243010:intron | 25.0% |
| ! | GGATTTATCATTCATCTTAT+TGG | + | chr8_2:27724630-27724649 | Msa1243010:intron | 25.0% |
| !! | CAACCTAGTCTTTAATAATA+TGG | - | chr8_2:27724659-27724678 | None:intergenic | 25.0% |
| ! | GTATAAAACCAACTATAGAA+AGG | - | chr8_2:27724902-27724921 | None:intergenic | 25.0% |
| !! | TTCTTTTTCTATTAGTGCTT+TGG | + | chr8_2:27725156-27725175 | Msa1243010:three_prime_UTR | 25.0% |
| !! | TATAGTTATGCAAATTTTCC+AGG | + | chr8_2:27725216-27725235 | Msa1243010:three_prime_UTR | 25.0% |
| ! | CATAACATTATTTGAAAACC+TGG | - | chr8_2:27725237-27725256 | None:intergenic | 25.0% |
| ACAAAGCTTAATAGTCTTTG+TGG | - | chr8_2:27723894-27723913 | None:intergenic | 30.0% | |
| ! | AGTTGATATTACTGGATGAA+TGG | + | chr8_2:27723995-27724014 | Msa1243010:CDS | 30.0% |
| !! | GATTCATTTGCAAAAGCATT+TGG | - | chr8_2:27724110-27724129 | None:intergenic | 30.0% |
| ATTCCAGTTCTTATCCATAA+GGG | + | chr8_2:27724144-27724163 | Msa1243010:CDS | 30.0% | |
| CATTGTTGAGTATATTGATG+AGG | + | chr8_2:27724191-27724210 | Msa1243010:CDS | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | + | chr8_2:27724196-27724215 | Msa1243010:CDS | 30.0% | |
| !!! | ACAAGAAGGTAAGTTTTGTT+AGG | + | chr8_2:27724292-27724311 | Msa1243010:intron | 30.0% |
| !! | TTACCATATTTTTACCTAGC+AGG | + | chr8_2:27724326-27724345 | Msa1243010:intron | 30.0% |
| TTTCCTGCTAGGTAAAAATA+TGG | - | chr8_2:27724332-27724351 | None:intergenic | 30.0% | |
| TACTATACTCATATCTCACT+AGG | - | chr8_2:27724583-27724602 | None:intergenic | 30.0% | |
| TTAATGTGTTGCAAAAATGC+AGG | + | chr8_2:27724718-27724737 | Msa1243010:intron | 30.0% | |
| AAAGAGAGATGAGATTGAAT+TGG | + | chr8_2:27724772-27724791 | Msa1243010:CDS | 30.0% | |
| AGTGTGATAAATTGATTGCT+TGG | + | chr8_2:27724957-27724976 | Msa1243010:CDS | 30.0% | |
| GTGTGATAAATTGATTGCTT+GGG | + | chr8_2:27724958-27724977 | Msa1243010:CDS | 30.0% | |
| ! | TTGTTGTTAACTATAGGAAG+AGG | + | chr8_2:27725047-27725066 | Msa1243010:CDS | 30.0% |
| ACAAAGCTTAATAGTCTTTG+TGG | - | chr8_2:27723894-27723913 | None:intergenic | 30.0% | |
| ! | AGTTGATATTACTGGATGAA+TGG | + | chr8_2:27723995-27724014 | Msa1243010:CDS | 30.0% |
| !! | GATTCATTTGCAAAAGCATT+TGG | - | chr8_2:27724110-27724129 | None:intergenic | 30.0% |
| ATTCCAGTTCTTATCCATAA+GGG | + | chr8_2:27724144-27724163 | Msa1243010:CDS | 30.0% | |
| CATTGTTGAGTATATTGATG+AGG | + | chr8_2:27724191-27724210 | Msa1243010:CDS | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | + | chr8_2:27724196-27724215 | Msa1243010:CDS | 30.0% | |
| !!! | ACAAGAAGGTAAGTTTTGTT+AGG | + | chr8_2:27724292-27724311 | Msa1243010:intron | 30.0% |
| !! | TTACCATATTTTTACCTAGC+AGG | + | chr8_2:27724326-27724345 | Msa1243010:intron | 30.0% |
| TTTCCTGCTAGGTAAAAATA+TGG | - | chr8_2:27724332-27724351 | None:intergenic | 30.0% | |
| TACTATACTCATATCTCACT+AGG | - | chr8_2:27724583-27724602 | None:intergenic | 30.0% | |
| TTAATGTGTTGCAAAAATGC+AGG | + | chr8_2:27724718-27724737 | Msa1243010:intron | 30.0% | |
| AAAGAGAGATGAGATTGAAT+TGG | + | chr8_2:27724772-27724791 | Msa1243010:CDS | 30.0% | |
| AGTGTGATAAATTGATTGCT+TGG | + | chr8_2:27724957-27724976 | Msa1243010:CDS | 30.0% | |
| GTGTGATAAATTGATTGCTT+GGG | + | chr8_2:27724958-27724977 | Msa1243010:CDS | 30.0% | |
| ! | TTGTTGTTAACTATAGGAAG+AGG | + | chr8_2:27725047-27725066 | Msa1243010:CDS | 30.0% |
| TTGGAATGAACAAGACTTTC+AGG | - | chr8_2:27723936-27723955 | None:intergenic | 35.0% | |
| GATGAATGGCTTAGTATGTT+TGG | + | chr8_2:27724009-27724028 | Msa1243010:CDS | 35.0% | |
| AGGGATTAAGTATGAGTACA+AGG | + | chr8_2:27724062-27724081 | Msa1243010:CDS | 35.0% | |
| ACTGGAATCTTCTTGTGAAT+TGG | - | chr8_2:27724132-27724151 | None:intergenic | 35.0% | |
| GATTCCAGTTCTTATCCATA+AGG | + | chr8_2:27724143-27724162 | Msa1243010:CDS | 35.0% | |
| TTTCCCTTATGGATAAGAAC+TGG | - | chr8_2:27724150-27724169 | None:intergenic | 35.0% | |
| !!! | CACAAATTGGTTTTCCCTTA+TGG | - | chr8_2:27724161-27724180 | None:intergenic | 35.0% |
| GTATATTGATGAGGTTTGGA+AGG | + | chr8_2:27724200-27724219 | Msa1243010:CDS | 35.0% | |
| ! | AGAAAGCTCAAGCAAGATTT+TGG | + | chr8_2:27724256-27724275 | Msa1243010:CDS | 35.0% |
| ! | GAAAGCTCAAGCAAGATTTT+GGG | + | chr8_2:27724257-27724276 | Msa1243010:CDS | 35.0% |
| ATACTCATATCTCACTAGGA+AGG | - | chr8_2:27724579-27724598 | None:intergenic | 35.0% | |
| TGAGATTGAATTGGCAAAGA+AGG | + | chr8_2:27724781-27724800 | Msa1243010:CDS | 35.0% | |
| AAGGAATTAGAGAATGTGCT+TGG | + | chr8_2:27724821-27724840 | Msa1243010:CDS | 35.0% | |
| AATGTGTCACCACCAAAATA+AGG | - | chr8_2:27724854-27724873 | None:intergenic | 35.0% | |
| !!! | TATTTTGGTGGTGACACATT+TGG | + | chr8_2:27724854-27724873 | Msa1243010:CDS | 35.0% |
| !!! | ATTTTGGTGGTGACACATTT+GGG | + | chr8_2:27724855-27724874 | Msa1243010:CDS | 35.0% |
| CTTTGATCCCTTTCTATAGT+TGG | + | chr8_2:27724891-27724910 | Msa1243010:CDS | 35.0% | |
| TTTATGCAACTTCAGAGTTG+AGG | + | chr8_2:27724931-27724950 | Msa1243010:CDS | 35.0% | |
| TTTCTCATCAGCAACAGATT+TGG | - | chr8_2:27725014-27725033 | None:intergenic | 35.0% | |
| ! | CTCTGAGAAATTGTACTTGT+TGG | + | chr8_2:27725099-27725118 | Msa1243010:three_prime_UTR | 35.0% |
| TTGGAATGAACAAGACTTTC+AGG | - | chr8_2:27723936-27723955 | None:intergenic | 35.0% | |
| GATGAATGGCTTAGTATGTT+TGG | + | chr8_2:27724009-27724028 | Msa1243010:CDS | 35.0% | |
| AGGGATTAAGTATGAGTACA+AGG | + | chr8_2:27724062-27724081 | Msa1243010:CDS | 35.0% | |
| ACTGGAATCTTCTTGTGAAT+TGG | - | chr8_2:27724132-27724151 | None:intergenic | 35.0% | |
| GATTCCAGTTCTTATCCATA+AGG | + | chr8_2:27724143-27724162 | Msa1243010:CDS | 35.0% | |
| TTTCCCTTATGGATAAGAAC+TGG | - | chr8_2:27724150-27724169 | None:intergenic | 35.0% | |
| !!! | CACAAATTGGTTTTCCCTTA+TGG | - | chr8_2:27724161-27724180 | None:intergenic | 35.0% |
| GTATATTGATGAGGTTTGGA+AGG | + | chr8_2:27724200-27724219 | Msa1243010:CDS | 35.0% | |
| ! | AGAAAGCTCAAGCAAGATTT+TGG | + | chr8_2:27724256-27724275 | Msa1243010:CDS | 35.0% |
| ! | GAAAGCTCAAGCAAGATTTT+GGG | + | chr8_2:27724257-27724276 | Msa1243010:CDS | 35.0% |
| ATACTCATATCTCACTAGGA+AGG | - | chr8_2:27724579-27724598 | None:intergenic | 35.0% | |
| TGAGATTGAATTGGCAAAGA+AGG | + | chr8_2:27724781-27724800 | Msa1243010:CDS | 35.0% | |
| AAGGAATTAGAGAATGTGCT+TGG | + | chr8_2:27724821-27724840 | Msa1243010:CDS | 35.0% | |
| AATGTGTCACCACCAAAATA+AGG | - | chr8_2:27724854-27724873 | None:intergenic | 35.0% | |
| !!! | TATTTTGGTGGTGACACATT+TGG | + | chr8_2:27724854-27724873 | Msa1243010:CDS | 35.0% |
| !!! | ATTTTGGTGGTGACACATTT+GGG | + | chr8_2:27724855-27724874 | Msa1243010:CDS | 35.0% |
| CTTTGATCCCTTTCTATAGT+TGG | + | chr8_2:27724891-27724910 | Msa1243010:CDS | 35.0% | |
| TTTATGCAACTTCAGAGTTG+AGG | + | chr8_2:27724931-27724950 | Msa1243010:CDS | 35.0% | |
| TTTCTCATCAGCAACAGATT+TGG | - | chr8_2:27725014-27725033 | None:intergenic | 35.0% | |
| ! | CTCTGAGAAATTGTACTTGT+TGG | + | chr8_2:27725099-27725118 | Msa1243010:three_prime_UTR | 35.0% |
| AATCACAGAGCTGAGAGAAT+TGG | - | chr8_2:27723955-27723974 | None:intergenic | 40.0% | |
| TCTGTGATTGCCTTTGACAA+TGG | + | chr8_2:27723966-27723985 | Msa1243010:exon | 40.0% | |
| AACTCTTCTGCCATTGTCAA+AGG | - | chr8_2:27723979-27723998 | None:intergenic | 40.0% | |
| !! | GGCAGAAGAGTTGATATTAC+TGG | + | chr8_2:27723987-27724006 | Msa1243010:CDS | 40.0% |
| !! | AGGATAGCATTGGCTGAAAA+AGG | + | chr8_2:27724042-27724061 | Msa1243010:CDS | 40.0% |
| !! | GGATAGCATTGGCTGAAAAA+GGG | + | chr8_2:27724043-27724062 | Msa1243010:CDS | 40.0% |
| TGATGAGGTTTGGAAGGATA+AGG | + | chr8_2:27724206-27724225 | Msa1243010:CDS | 40.0% | |
| GCTTTCTCATAAGGATCTGA+CGG | - | chr8_2:27724243-27724262 | None:intergenic | 40.0% | |
| CTTGCTTGAGCTTTCTCATA+AGG | - | chr8_2:27724252-27724271 | None:intergenic | 40.0% | |
| !! | GGCTGATTTTGTCAACAAGA+AGG | + | chr8_2:27724278-27724297 | Msa1243010:CDS | 40.0% |
| CATATCTCACTAGGAAGGAA+AGG | - | chr8_2:27724574-27724593 | None:intergenic | 40.0% | |
| TGTGTTGCAAAAATGCAGGT+TGG | + | chr8_2:27724722-27724741 | Msa1243010:intron | 40.0% | |
| !! | AAAATGCAGGTTGGTGATGT+TGG | + | chr8_2:27724731-27724750 | Msa1243010:intron | 40.0% |
| TGATGTTGGAGGAAGGATAT+GGG | + | chr8_2:27724745-27724764 | Msa1243010:CDS | 40.0% | |
| ! | GCAAAGAAGGAGTTGATTGA+AGG | + | chr8_2:27724794-27724813 | Msa1243010:CDS | 40.0% |
| ! | GGAGTTGATTGAAGGCTTAA+AGG | + | chr8_2:27724802-27724821 | Msa1243010:CDS | 40.0% |
| !! | CTTGGAGACCAACCTTATTT+TGG | + | chr8_2:27724839-27724858 | Msa1243010:CDS | 40.0% |
| TGTCACCACCAAAATAAGGT+TGG | - | chr8_2:27724850-27724869 | None:intergenic | 40.0% | |
| ATCTGTTGCTGATGAGAAAG+AGG | + | chr8_2:27725015-27725034 | Msa1243010:CDS | 40.0% | |
| CTATAGGAAGAGGTTTGAGT+TGG | + | chr8_2:27725057-27725076 | Msa1243010:CDS | 40.0% | |
| AATCACAGAGCTGAGAGAAT+TGG | - | chr8_2:27723955-27723974 | None:intergenic | 40.0% | |
| TCTGTGATTGCCTTTGACAA+TGG | + | chr8_2:27723966-27723985 | Msa1243010:exon | 40.0% | |
| AACTCTTCTGCCATTGTCAA+AGG | - | chr8_2:27723979-27723998 | None:intergenic | 40.0% | |
| !! | GGCAGAAGAGTTGATATTAC+TGG | + | chr8_2:27723987-27724006 | Msa1243010:CDS | 40.0% |
| !! | AGGATAGCATTGGCTGAAAA+AGG | + | chr8_2:27724042-27724061 | Msa1243010:CDS | 40.0% |
| !! | GGATAGCATTGGCTGAAAAA+GGG | + | chr8_2:27724043-27724062 | Msa1243010:CDS | 40.0% |
| TGATGAGGTTTGGAAGGATA+AGG | + | chr8_2:27724206-27724225 | Msa1243010:CDS | 40.0% | |
| GCTTTCTCATAAGGATCTGA+CGG | - | chr8_2:27724243-27724262 | None:intergenic | 40.0% | |
| CTTGCTTGAGCTTTCTCATA+AGG | - | chr8_2:27724252-27724271 | None:intergenic | 40.0% | |
| !! | GGCTGATTTTGTCAACAAGA+AGG | + | chr8_2:27724278-27724297 | Msa1243010:CDS | 40.0% |
| CATATCTCACTAGGAAGGAA+AGG | - | chr8_2:27724574-27724593 | None:intergenic | 40.0% | |
| TGTGTTGCAAAAATGCAGGT+TGG | + | chr8_2:27724722-27724741 | Msa1243010:intron | 40.0% | |
| !! | AAAATGCAGGTTGGTGATGT+TGG | + | chr8_2:27724731-27724750 | Msa1243010:intron | 40.0% |
| TGATGTTGGAGGAAGGATAT+GGG | + | chr8_2:27724745-27724764 | Msa1243010:CDS | 40.0% | |
| ! | GCAAAGAAGGAGTTGATTGA+AGG | + | chr8_2:27724794-27724813 | Msa1243010:CDS | 40.0% |
| ! | GGAGTTGATTGAAGGCTTAA+AGG | + | chr8_2:27724802-27724821 | Msa1243010:CDS | 40.0% |
| !! | CTTGGAGACCAACCTTATTT+TGG | + | chr8_2:27724839-27724858 | Msa1243010:CDS | 40.0% |
| TGTCACCACCAAAATAAGGT+TGG | - | chr8_2:27724850-27724869 | None:intergenic | 40.0% | |
| ATCTGTTGCTGATGAGAAAG+AGG | + | chr8_2:27725015-27725034 | Msa1243010:CDS | 40.0% | |
| CTATAGGAAGAGGTTTGAGT+TGG | + | chr8_2:27725057-27725076 | Msa1243010:CDS | 40.0% | |
| GTATGTTTGGCATGAGAGCA+AGG | + | chr8_2:27724022-27724041 | Msa1243010:CDS | 45.0% | |
| CATGAGAGCAAGGATAGCAT+TGG | + | chr8_2:27724032-27724051 | Msa1243010:CDS | 45.0% | |
| GTGATGTTGGAGGAAGGATA+TGG | + | chr8_2:27724744-27724763 | Msa1243010:CDS | 45.0% | |
| !!! | GGAGACCAACCTTATTTTGG+TGG | + | chr8_2:27724842-27724861 | Msa1243010:CDS | 45.0% |
| GGCAAAGAGATGCAAGCAAA+GGG | + | chr8_2:27724979-27724998 | Msa1243010:CDS | 45.0% | |
| GTTGGACTGAGAAGACAGTT+TGG | + | chr8_2:27725075-27725094 | Msa1243010:exon | 45.0% | |
| GTATGTTTGGCATGAGAGCA+AGG | + | chr8_2:27724022-27724041 | Msa1243010:CDS | 45.0% | |
| CATGAGAGCAAGGATAGCAT+TGG | + | chr8_2:27724032-27724051 | Msa1243010:CDS | 45.0% | |
| GTGATGTTGGAGGAAGGATA+TGG | + | chr8_2:27724744-27724763 | Msa1243010:CDS | 45.0% | |
| !!! | GGAGACCAACCTTATTTTGG+TGG | + | chr8_2:27724842-27724861 | Msa1243010:CDS | 45.0% |
| GGCAAAGAGATGCAAGCAAA+GGG | + | chr8_2:27724979-27724998 | Msa1243010:CDS | 45.0% | |
| GTTGGACTGAGAAGACAGTT+TGG | + | chr8_2:27725075-27725094 | Msa1243010:exon | 45.0% | |
| !! | ATGCAGGTTGGTGATGTTGG+AGG | + | chr8_2:27724734-27724753 | Msa1243010:intron | 50.0% |
| !! | AGGTTGGTGATGTTGGAGGA+AGG | + | chr8_2:27724738-27724757 | Msa1243010:intron | 50.0% |
| GGGCAAAGAGATGCAAGCAA+AGG | + | chr8_2:27724978-27724997 | Msa1243010:CDS | 50.0% | |
| !! | ATGCAGGTTGGTGATGTTGG+AGG | + | chr8_2:27724734-27724753 | Msa1243010:intron | 50.0% |
| !! | AGGTTGGTGATGTTGGAGGA+AGG | + | chr8_2:27724738-27724757 | Msa1243010:intron | 50.0% |
| GGGCAAAGAGATGCAAGCAA+AGG | + | chr8_2:27724978-27724997 | Msa1243010:CDS | 50.0% | |
| GTTGGAGGAAGGATATGGGC+TGG | + | chr8_2:27724749-27724768 | Msa1243010:CDS | 55.0% | |
| GTTGGAGGAAGGATATGGGC+TGG | + | chr8_2:27724749-27724768 | Msa1243010:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 27723847 | 27725281 | 27723847 | ID=Msa1243010;Name=Msa1243010 |
| chr8_2 | mRNA | 27723847 | 27725281 | 27723847 | ID=Msa1243010-mRNA-1;Parent=Msa1243010;Name=Msa1243010-mRNA-1;_AED=0.08;_eAED=0.08;_QI=138|1|1|1|1|1|2|197|219 |
| chr8_2 | exon | 27723847 | 27724299 | 27723847 | ID=Msa1243010-mRNA-1:exon:9799;Parent=Msa1243010-mRNA-1 |
| chr8_2 | exon | 27724740 | 27725281 | 27724740 | ID=Msa1243010-mRNA-1:exon:9800;Parent=Msa1243010-mRNA-1 |
| chr8_2 | five_prime_UTR | 27723847 | 27723984 | 27723847 | ID=Msa1243010-mRNA-1:five_prime_utr;Parent=Msa1243010-mRNA-1 |
| chr8_2 | CDS | 27723985 | 27724299 | 27723985 | ID=Msa1243010-mRNA-1:cds;Parent=Msa1243010-mRNA-1 |
| chr8_2 | CDS | 27724740 | 27725084 | 27724740 | ID=Msa1243010-mRNA-1:cds;Parent=Msa1243010-mRNA-1 |
| chr8_2 | three_prime_UTR | 27725085 | 27725281 | 27725085 | ID=Msa1243010-mRNA-1:three_prime_utr;Parent=Msa1243010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
