Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781570 | XP_027351700.1 | 55.801 | 181 | 48 | 1 | 1 | 149 | 1 | 181 | 1.49e-59 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781570 | sp|Q9SKK4|GSL_ARATH | 39.759 | 166 | 68 | 1 | 16 | 149 | 4 | 169 | 1.13e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781570 | A0A1S2Z1X3 | 56.667 | 180 | 47 | 2 | 1 | 149 | 2 | 181 | 2.07e-57 | 192 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0781570 | 0.801331 | 9.468773e-49 | -8.615850e-47 |
| Msa0011720 | Msa0781570 | 0.837446 | 5.173130e-57 | -8.615850e-47 |
| Msa0011850 | Msa0781570 | 0.802689 | 4.979110e-49 | -8.615850e-47 |
| Msa0012440 | Msa0781570 | 0.813939 | 1.985297e-51 | -8.615850e-47 |
| Msa0024680 | Msa0781570 | 0.832460 | 9.332668e-56 | -8.615850e-47 |
| Msa0027540 | Msa0781570 | 0.811089 | 8.336174e-51 | -8.615850e-47 |
| Msa0030000 | Msa0781570 | 0.811053 | 8.486479e-51 | -8.615850e-47 |
| Msa0032370 | Msa0781570 | 0.814423 | 1.552392e-51 | -8.615850e-47 |
| Msa0050430 | Msa0781570 | 0.823523 | 1.323417e-53 | -8.615850e-47 |
| Msa0050730 | Msa0781570 | 0.825739 | 3.977479e-54 | -8.615850e-47 |
| Msa0050760 | Msa0781570 | 0.813364 | 2.656571e-51 | -8.615850e-47 |
| Msa0057240 | Msa0781570 | 0.814321 | 1.634873e-51 | -8.615850e-47 |
| Msa0058020 | Msa0781570 | 0.806703 | 7.230362e-50 | -8.615850e-47 |
| Msa0060600 | Msa0781570 | 0.817139 | 3.849603e-52 | -8.615850e-47 |
| Msa0075310 | Msa0781570 | 0.803684 | 3.099844e-49 | -8.615850e-47 |
| Msa0094420 | Msa0781570 | 0.871842 | 5.020669e-67 | -8.615850e-47 |
| Msa0105340 | Msa0781570 | 0.817788 | 2.749436e-52 | -8.615850e-47 |
| Msa0105420 | Msa0781570 | 0.841535 | 4.480104e-58 | -8.615850e-47 |
| Msa0113160 | Msa0781570 | 0.836452 | 9.282822e-57 | -8.615850e-47 |
| Msa0114540 | Msa0781570 | -0.818212 | 2.205073e-52 | -8.615850e-47 |
| Msa0120330 | Msa0781570 | 0.833162 | 6.247036e-56 | -8.615850e-47 |
| Msa0619980 | Msa0781570 | 0.820990 | 5.120873e-53 | -8.615850e-47 |
| Msa0622340 | Msa0781570 | 0.808877 | 2.495907e-50 | -8.615850e-47 |
| Msa0638280 | Msa0781570 | 0.804045 | 2.608063e-49 | -8.615850e-47 |
| Msa0638320 | Msa0781570 | 0.805192 | 1.503410e-49 | -8.615850e-47 |
| Msa0642650 | Msa0781570 | 0.820804 | 5.651525e-53 | -8.615850e-47 |
| Msa0652980 | Msa0781570 | 0.800503 | 1.398142e-48 | -8.615850e-47 |
| Msa0669850 | Msa0781570 | 0.815023 | 1.143033e-51 | -8.615850e-47 |
| Msa0670980 | Msa0781570 | 0.804736 | 1.872058e-49 | -8.615850e-47 |
| Msa0677270 | Msa0781570 | 0.811827 | 5.762175e-51 | -8.615850e-47 |
| Msa0681890 | Msa0781570 | 0.824812 | 6.588689e-54 | -8.615850e-47 |
| Msa0686610 | Msa0781570 | 0.805585 | 1.243110e-49 | -8.615850e-47 |
| Msa0706370 | Msa0781570 | 0.831026 | 2.108035e-55 | -8.615850e-47 |
| Msa0739570 | Msa0781570 | 0.802123 | 6.513480e-49 | -8.615850e-47 |
| Msa0740420 | Msa0781570 | 0.883820 | 3.244810e-71 | -8.615850e-47 |
| Msa0754720 | Msa0781570 | -0.824195 | 9.208115e-54 | -8.615850e-47 |
| Msa0781570 | Msa0782330 | 0.818617 | 1.784815e-52 | -8.615850e-47 |
| Msa0781570 | Msa0792510 | 0.800095 | 1.692271e-48 | -8.615850e-47 |
| Msa0781570 | Msa0820670 | 0.868192 | 7.839816e-66 | -8.615850e-47 |
| Msa0781570 | Msa0852730 | 0.819200 | 1.315640e-52 | -8.615850e-47 |
| Msa0781570 | Msa0853320 | 0.805060 | 1.601661e-49 | -8.615850e-47 |
| Msa0781570 | Msa0862100 | 0.803659 | 3.136225e-49 | -8.615850e-47 |
| Msa0781570 | Msa0866120 | 0.826643 | 2.423916e-54 | -8.615850e-47 |
| Msa0781570 | Msa0877420 | 0.806402 | 8.371656e-50 | -8.615850e-47 |
| Msa0781570 | Msa0893810 | 0.811709 | 6.111818e-51 | -8.615850e-47 |
| Msa0781570 | Msa0905550 | 0.807318 | 5.358962e-50 | -8.615850e-47 |
| Msa0781570 | Msa0907700 | 0.828479 | 8.789347e-55 | -8.615850e-47 |
| Msa0781570 | Msa0908170 | 0.832320 | 1.011282e-55 | -8.615850e-47 |
| Msa0781570 | Msa0922540 | 0.859233 | 4.765315e-63 | -8.615850e-47 |
| Msa0781570 | Msa0925160 | 0.818354 | 2.047930e-52 | -8.615850e-47 |
| Msa0781570 | Msa0931950 | 0.805206 | 1.493136e-49 | -8.615850e-47 |
| Msa0781570 | Msa0942730 | 0.823614 | 1.259511e-53 | -8.615850e-47 |
| Msa0781570 | Msa0946080 | 0.809287 | 2.038757e-50 | -8.615850e-47 |
| Msa0781570 | Msa0951710 | 0.808639 | 2.805946e-50 | -8.615850e-47 |
| Msa0781570 | Msa0955310 | 0.810519 | 1.106996e-50 | -8.615850e-47 |
| Msa0781570 | Msa0958020 | 0.841533 | 4.487018e-58 | -8.615850e-47 |
| Msa0781570 | Msa0959010 | 0.811844 | 5.714251e-51 | -8.615850e-47 |
| Msa0781570 | Msa0979550 | 0.811131 | 8.159506e-51 | -8.615850e-47 |
| Msa0781570 | Msa0988480 | 0.809272 | 2.053763e-50 | -8.615850e-47 |
| Msa0781570 | Msa0990520 | 0.827245 | 1.740526e-54 | -8.615850e-47 |
| Msa0781570 | Msa0993530 | 0.835082 | 2.064117e-56 | -8.615850e-47 |
| Msa0781570 | Msa0996080 | 0.824198 | 9.188998e-54 | -8.615850e-47 |
| Msa0781570 | Msa0996090 | 0.819015 | 1.449615e-52 | -8.615850e-47 |
| Msa0781570 | Msa1002040 | 0.820788 | 5.699710e-53 | -8.615850e-47 |
| Msa0781570 | Msa1009000 | 0.803028 | 4.239078e-49 | -8.615850e-47 |
| Msa0781570 | Msa1015060 | 0.812230 | 4.707510e-51 | -8.615850e-47 |
| Msa0781570 | Msa1018790 | 0.800065 | 1.716600e-48 | -8.615850e-47 |
| Msa0781570 | Msa1020710 | 0.823037 | 1.718272e-53 | -8.615850e-47 |
| Msa0781570 | Msa1030280 | 0.813912 | 2.012475e-51 | -8.615850e-47 |
| Msa0781570 | Msa1044340 | 0.806372 | 8.494563e-50 | -8.615850e-47 |
| Msa0781570 | Msa1055260 | 0.802994 | 4.307862e-49 | -8.615850e-47 |
| Msa0781570 | Msa1055280 | 0.800228 | 1.590144e-48 | -8.615850e-47 |
| Msa0781570 | Msa1087470 | 0.815752 | 7.867802e-52 | -8.615850e-47 |
| Msa0781570 | Msa1092820 | 0.820769 | 5.756945e-53 | -8.615850e-47 |
| Msa0781570 | Msa1106810 | 0.809844 | 1.547789e-50 | -8.615850e-47 |
| Msa0781570 | Msa1130210 | -0.813986 | 1.939045e-51 | -8.615850e-47 |
| Msa0781570 | Msa1172590 | 0.814436 | 1.542467e-51 | -8.615850e-47 |
| Msa0781570 | Msa1193950 | -0.803899 | 2.797293e-49 | -8.615850e-47 |
| Msa0781570 | Msa1200920 | 0.805866 | 1.085581e-49 | -8.615850e-47 |
| Msa0781570 | Msa1218650 | 0.810619 | 1.053657e-50 | -8.615850e-47 |
| Msa0781570 | Msa1220230 | 0.802777 | 4.775965e-49 | -8.615850e-47 |
| Msa0781570 | Msa1220450 | -0.815671 | 8.203095e-52 | -8.615850e-47 |
| Msa0781570 | Msa1220460 | -0.809422 | 1.907503e-50 | -8.615850e-47 |
| Msa0781570 | Msa1220480 | -0.807997 | 3.845573e-50 | -8.615850e-47 |
| Msa0781570 | Msa1221900 | 0.814706 | 1.343884e-51 | -8.615850e-47 |
| Msa0781570 | Msa1223840 | 0.804741 | 1.867118e-49 | -8.615850e-47 |
| Msa0781570 | Msa1237030 | 0.822692 | 2.067735e-53 | -8.615850e-47 |
| Msa0781570 | Msa1243010 | 0.806133 | 9.536063e-50 | -8.615850e-47 |
| Msa0781570 | Msa1263660 | 0.806088 | 9.750055e-50 | -8.615850e-47 |
| Msa0781570 | Msa1265070 | 0.818070 | 2.374539e-52 | -8.615850e-47 |
| Msa0781570 | Msa1265960 | 0.802560 | 5.295210e-49 | -8.615850e-47 |
| Msa0781570 | Msa1316170 | 0.807370 | 5.226408e-50 | -8.615850e-47 |
| Msa0781570 | Msa1323060 | 0.820100 | 8.199697e-53 | -8.615850e-47 |
| Msa0781570 | Msa1327760 | 0.811906 | 5.539070e-51 | -8.615850e-47 |
| Msa0781570 | Msa1327820 | 0.807670 | 4.513360e-50 | -8.615850e-47 |
| Msa0781570 | Msa1337730 | 0.832014 | 1.203357e-55 | -8.615850e-47 |
| Msa0781570 | Msa1362510 | 0.827632 | 1.405565e-54 | -8.615850e-47 |
| Msa0781570 | Msa1367390 | -0.816989 | 4.161536e-52 | -8.615850e-47 |
| Msa0781570 | Msa1367940 | 0.804293 | 2.315390e-49 | -8.615850e-47 |
| Msa0781570 | Msa1373510 | 0.816434 | 5.542247e-52 | -8.615850e-47 |
| Msa0781570 | Msa1381130 | 0.801477 | 8.840877e-49 | -8.615850e-47 |
| Msa0781570 | Msa1382310 | 0.808455 | 3.070815e-50 | -8.615850e-47 |
| Msa0781570 | Msa1390310 | 0.853860 | 1.807600e-61 | -8.615850e-47 |
| Msa0781570 | Msa1398860 | 0.812948 | 3.278393e-51 | -8.615850e-47 |
| Msa0781570 | Msa1408790 | 0.819772 | 9.743443e-53 | -8.615850e-47 |
| Msa0781570 | Msa1419110 | 0.806900 | 6.571390e-50 | -8.615850e-47 |
| Msa0781570 | Msa1422270 | 0.804639 | 1.961607e-49 | -8.615850e-47 |
| Msa0781570 | Msa1429420 | 0.819614 | 1.059066e-52 | -8.615850e-47 |
| Msa0781570 | Msa1435670 | 0.801104 | 1.053841e-48 | -8.615850e-47 |
| Msa0781570 | Msa1436040 | 0.812277 | 4.596728e-51 | -8.615850e-47 |
| Msa0781570 | Msa1439230 | 0.812038 | 5.184301e-51 | -8.615850e-47 |
| Msa0781570 | Msa1440600 | 0.815579 | 8.600346e-52 | -8.615850e-47 |
| Msa0781570 | Msa1445790 | 0.803163 | 3.973984e-49 | -8.615850e-47 |
| Msa0781570 | Msa1456650 | 0.800493 | 1.404189e-48 | -8.615850e-47 |
| Msa0125230 | Msa0781570 | 0.802190 | 6.310468e-49 | -8.615850e-47 |
| Msa0139900 | Msa0781570 | 0.803057 | 4.181192e-49 | -8.615850e-47 |
| Msa0140910 | Msa0781570 | 0.801443 | 8.981026e-49 | -8.615850e-47 |
| Msa0141670 | Msa0781570 | 0.813352 | 2.673468e-51 | -8.615850e-47 |
| Msa0142870 | Msa0781570 | 0.801700 | 7.957299e-49 | -8.615850e-47 |
| Msa0149560 | Msa0781570 | 0.815937 | 7.156790e-52 | -8.615850e-47 |
| Msa0151690 | Msa0781570 | 0.818781 | 1.638400e-52 | -8.615850e-47 |
| Msa0162030 | Msa0781570 | 0.805043 | 1.615101e-49 | -8.615850e-47 |
| Msa0168100 | Msa0781570 | 0.815500 | 8.954730e-52 | -8.615850e-47 |
| Msa0172350 | Msa0781570 | 0.837353 | 5.466543e-57 | -8.615850e-47 |
| Msa0207000 | Msa0781570 | 0.800784 | 1.225357e-48 | -8.615850e-47 |
| Msa0208520 | Msa0781570 | 0.819145 | 1.354530e-52 | -8.615850e-47 |
| Msa0223290 | Msa0781570 | 0.804245 | 2.369173e-49 | -8.615850e-47 |
| Msa0227500 | Msa0781570 | 0.810547 | 1.091734e-50 | -8.615850e-47 |
| Msa0227510 | Msa0781570 | 0.818102 | 2.335247e-52 | -8.615850e-47 |
| Msa0369570 | Msa0781570 | 0.823577 | 1.285437e-53 | -8.615850e-47 |
| Msa0371610 | Msa0781570 | 0.801605 | 8.323287e-49 | -8.615850e-47 |
| Msa0377530 | Msa0781570 | 0.802381 | 5.763005e-49 | -8.615850e-47 |
| Msa0380920 | Msa0781570 | 0.811116 | 8.222391e-51 | -8.615850e-47 |
| Msa0382560 | Msa0781570 | 0.807954 | 3.926224e-50 | -8.615850e-47 |
| Msa0420070 | Msa0781570 | 0.810513 | 1.110416e-50 | -8.615850e-47 |
| Msa0423360 | Msa0781570 | -0.814588 | 1.427557e-51 | -8.615850e-47 |
| Msa0430820 | Msa0781570 | 0.811580 | 6.521621e-51 | -8.615850e-47 |
| Msa0442880 | Msa0781570 | 0.817395 | 3.371750e-52 | -8.615850e-47 |
| Msa0448750 | Msa0781570 | 0.801845 | 7.430154e-49 | -8.615850e-47 |
| Msa0469910 | Msa0781570 | -0.826948 | 2.049392e-54 | -8.615850e-47 |
| Msa0259560 | Msa0781570 | 0.823191 | 1.581779e-53 | -8.615850e-47 |
| Msa0267760 | Msa0781570 | 0.835378 | 1.737370e-56 | -8.615850e-47 |
| Msa0274780 | Msa0781570 | 0.800446 | 1.435499e-48 | -8.615850e-47 |
| Msa0284780 | Msa0781570 | 0.806599 | 7.608306e-50 | -8.615850e-47 |
| Msa0302650 | Msa0781570 | 0.810392 | 1.179181e-50 | -8.615850e-47 |
| Msa0315240 | Msa0781570 | 0.805694 | 1.179696e-49 | -8.615850e-47 |
| Msa0315480 | Msa0781570 | 0.806053 | 9.916470e-50 | -8.615850e-47 |
| Msa0328210 | Msa0781570 | 0.812957 | 3.263699e-51 | -8.615850e-47 |
| Msa0335040 | Msa0781570 | 0.802032 | 6.799710e-49 | -8.615850e-47 |
| Msa0344580 | Msa0781570 | 0.806946 | 6.424615e-50 | -8.615850e-47 |
| Msa0490300 | Msa0781570 | 0.827875 | 1.228483e-54 | -8.615850e-47 |
| Msa0508200 | Msa0781570 | 0.802897 | 4.511478e-49 | -8.615850e-47 |
| Msa0511890 | Msa0781570 | 0.806487 | 8.032331e-50 | -8.615850e-47 |
| Msa0517490 | Msa0781570 | 0.806167 | 9.382350e-50 | -8.615850e-47 |
| Msa0524120 | Msa0781570 | 0.808398 | 3.159002e-50 | -8.615850e-47 |
| Msa0524200 | Msa0781570 | -0.817514 | 3.169849e-52 | -8.615850e-47 |
| Msa0525240 | Msa0781570 | 0.805823 | 1.108078e-49 | -8.615850e-47 |
| Msa0526700 | Msa0781570 | 0.827083 | 1.903098e-54 | -8.615850e-47 |
| Msa0526710 | Msa0781570 | 0.831699 | 1.439332e-55 | -8.615850e-47 |
| Msa0535030 | Msa0781570 | 0.811650 | 6.296277e-51 | -8.615850e-47 |
| Msa0535060 | Msa0781570 | 0.810600 | 1.063350e-50 | -8.615850e-47 |
| Msa0535450 | Msa0781570 | 0.810582 | 1.072970e-50 | -8.615850e-47 |
| Msa0546380 | Msa0781570 | 0.806382 | 8.454151e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781570 | MtrunA17_Chr8g0362741 | 58.896 | 163 | 49 | 1 | 1 | 145 | 1 | 163 | 1.42e-59 | 186 |
| Msa0781570 | MtrunA17_Chr4g0011311 | 54.144 | 181 | 51 | 1 | 1 | 149 | 1 | 181 | 8.55e-59 | 185 |
| Msa0781570 | MtrunA17_Chr8g0364161 | 51.381 | 181 | 56 | 1 | 1 | 149 | 1 | 181 | 1.23e-56 | 175 |
| Msa0781570 | MtrunA17_Chr7g0236011 | 48.387 | 186 | 64 | 1 | 1 | 154 | 1 | 186 | 4.07e-53 | 172 |
| Msa0781570 | MtrunA17_Chr8g0335411 | 48.619 | 181 | 61 | 1 | 1 | 149 | 1 | 181 | 3.75e-52 | 169 |
| Msa0781570 | MtrunA17_Chr7g0247991 | 48.619 | 181 | 61 | 1 | 1 | 149 | 1 | 181 | 8.76e-52 | 169 |
| Msa0781570 | MtrunA17_Chr8g0364471 | 48.066 | 181 | 62 | 1 | 1 | 149 | 1 | 181 | 1.09e-50 | 166 |
| Msa0781570 | MtrunA17_Chr7g0235951 | 46.961 | 181 | 64 | 1 | 1 | 149 | 1 | 181 | 2.09e-50 | 165 |
| Msa0781570 | MtrunA17_Chr2g0311701 | 46.448 | 183 | 64 | 2 | 1 | 149 | 1 | 183 | 1.38e-46 | 155 |
| Msa0781570 | MtrunA17_Chr1g0187821 | 47.778 | 180 | 56 | 5 | 8 | 149 | 2 | 181 | 3.58e-45 | 151 |
| Msa0781570 | MtrunA17_Chr2g0311711 | 45.930 | 172 | 59 | 2 | 12 | 149 | 10 | 181 | 1.97e-44 | 149 |
| Msa0781570 | MtrunA17_Chr7g0235981 | 53.333 | 135 | 57 | 3 | 16 | 147 | 2 | 133 | 1.25e-43 | 146 |
| Msa0781570 | MtrunA17_Chr1g0187811 | 44.624 | 186 | 59 | 5 | 8 | 149 | 117 | 302 | 9.37e-42 | 145 |
| Msa0781570 | MtrunA17_Chr1g0187831 | 45.198 | 177 | 59 | 4 | 11 | 149 | 8 | 184 | 3.71e-41 | 141 |
| Msa0781570 | MtrunA17_Chr2g0311681 | 46.108 | 167 | 56 | 2 | 17 | 149 | 11 | 177 | 7.30e-41 | 140 |
| Msa0781570 | MtrunA17_Chr4g0066991 | 44.751 | 181 | 48 | 2 | 1 | 149 | 1 | 161 | 4.68e-40 | 138 |
| Msa0781570 | MtrunA17_Chr2g0311691 | 44.910 | 167 | 58 | 2 | 17 | 149 | 11 | 177 | 3.53e-39 | 136 |
| Msa0781570 | MtrunA17_Chr8g0354241 | 38.547 | 179 | 71 | 3 | 8 | 149 | 8 | 184 | 7.21e-39 | 135 |
| Msa0781570 | MtrunA17_Chr8g0354261 | 37.989 | 179 | 72 | 3 | 8 | 149 | 8 | 184 | 1.30e-37 | 132 |
| Msa0781570 | MtrunA17_Chr1g0167911 | 38.728 | 173 | 73 | 4 | 18 | 158 | 5 | 176 | 5.89e-36 | 127 |
| Msa0781570 | MtrunA17_Chr4g0055591 | 41.875 | 160 | 64 | 2 | 19 | 149 | 11 | 170 | 1.76e-35 | 126 |
| Msa0781570 | MtrunA17_Chr8g0336751 | 36.264 | 182 | 83 | 2 | 1 | 149 | 27 | 208 | 2.41e-33 | 121 |
| Msa0781570 | MtrunA17_Chr8g0336761 | 37.037 | 189 | 80 | 5 | 6 | 159 | 4 | 188 | 3.65e-33 | 120 |
| Msa0781570 | MtrunA17_Chr8g0336851 | 35.260 | 173 | 78 | 3 | 21 | 159 | 16 | 188 | 7.60e-33 | 119 |
| Msa0781570 | MtrunA17_Chr2g0311921 | 36.471 | 170 | 75 | 3 | 18 | 154 | 4 | 173 | 4.23e-32 | 117 |
| Msa0781570 | MtrunA17_Chr1g0167951 | 36.810 | 163 | 71 | 3 | 18 | 149 | 5 | 166 | 5.35e-32 | 117 |
| Msa0781570 | MtrunA17_Chr8g0336861 | 36.813 | 182 | 75 | 6 | 14 | 159 | 12 | 189 | 6.25e-32 | 117 |
| Msa0781570 | MtrunA17_Chr8g0336631 | 36.316 | 190 | 81 | 6 | 6 | 159 | 4 | 189 | 1.48e-31 | 115 |
| Msa0781570 | MtrunA17_Chr8g0348081 | 36.478 | 159 | 70 | 2 | 22 | 149 | 17 | 175 | 2.25e-30 | 112 |
| Msa0781570 | MtrunA17_Chr8g0336791 | 35.625 | 160 | 71 | 3 | 22 | 149 | 17 | 176 | 5.81e-30 | 107 |
| Msa0781570 | MtrunA17_Chr2g0311831 | 36.364 | 165 | 72 | 2 | 18 | 149 | 18 | 182 | 1.03e-29 | 111 |
| Msa0781570 | MtrunA17_Chr2g0311761 | 34.066 | 182 | 87 | 2 | 1 | 149 | 1 | 182 | 1.97e-29 | 110 |
| Msa0781570 | MtrunA17_Chr8g0336831 | 34.682 | 173 | 78 | 4 | 22 | 159 | 17 | 189 | 2.26e-29 | 107 |
| Msa0781570 | MtrunA17_Chr6g0472861 | 33.516 | 182 | 82 | 4 | 12 | 154 | 7 | 188 | 3.90e-29 | 109 |
| Msa0781570 | MtrunA17_Chr1g0168001 | 34.132 | 167 | 71 | 4 | 18 | 146 | 5 | 170 | 1.49e-28 | 103 |
| Msa0781570 | MtrunA17_Chr7g0225881 | 33.721 | 172 | 80 | 2 | 12 | 149 | 7 | 178 | 6.02e-28 | 106 |
| Msa0781570 | MtrunA17_Chr2g0311741 | 59.259 | 81 | 33 | 0 | 69 | 149 | 61 | 141 | 3.37e-27 | 103 |
| Msa0781570 | MtrunA17_Chr8g0336781 | 33.333 | 174 | 81 | 4 | 21 | 159 | 51 | 224 | 5.17e-27 | 104 |
| Msa0781570 | MtrunA17_Chr1g0167961 | 35.057 | 174 | 79 | 3 | 18 | 158 | 20 | 192 | 9.38e-27 | 103 |
| Msa0781570 | MtrunA17_Chr7g0266651 | 33.702 | 181 | 88 | 3 | 12 | 160 | 3 | 183 | 1.09e-26 | 103 |
| Msa0781570 | MtrunA17_Chr1g0161081 | 32.558 | 172 | 79 | 3 | 17 | 154 | 21 | 189 | 8.07e-26 | 100 |
| Msa0781570 | MtrunA17_Chr1g0184241 | 32.584 | 178 | 89 | 2 | 12 | 158 | 13 | 190 | 8.70e-26 | 100 |
| Msa0781570 | MtrunA17_Chr4g0066121 | 34.783 | 161 | 73 | 3 | 21 | 149 | 16 | 176 | 2.48e-25 | 99.4 |
| Msa0781570 | MtrunA17_Chr2g0311751 | 55.128 | 78 | 35 | 0 | 69 | 146 | 61 | 138 | 4.50e-25 | 94.7 |
| Msa0781570 | MtrunA17_Chr7g0235991 | 54.321 | 81 | 37 | 0 | 69 | 149 | 55 | 135 | 8.18e-25 | 94.7 |
| Msa0781570 | MtrunA17_Chr1g0161111 | 31.395 | 172 | 81 | 3 | 17 | 154 | 80 | 248 | 1.05e-24 | 98.6 |
| Msa0781570 | MtrunA17_Chr2g0311861 | 38.816 | 152 | 66 | 5 | 18 | 149 | 14 | 158 | 4.21e-23 | 93.2 |
| Msa0781570 | MtrunA17_Chr1g0161041 | 31.977 | 172 | 80 | 3 | 17 | 154 | 44 | 212 | 5.78e-23 | 93.2 |
| Msa0781570 | MtrunA17_Chr2g0311821 | 50.725 | 69 | 30 | 1 | 62 | 130 | 36 | 100 | 7.88e-15 | 67.0 |
| Msa0781570 | MtrunA17_Chr1g0167931 | 32.624 | 141 | 88 | 3 | 18 | 158 | 5 | 138 | 2.25e-13 | 66.2 |
| Msa0781570 | MtrunA17_Chr1g0161101 | 34.188 | 117 | 71 | 3 | 16 | 129 | 95 | 208 | 5.86e-13 | 65.5 |
| Msa0781570 | MtrunA17_Chr8g0354251 | 39.130 | 69 | 37 | 2 | 8 | 73 | 38 | 104 | 7.66e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781570 | AT2G25450.1 | 39.759 | 166 | 68 | 1 | 16 | 149 | 4 | 169 | 1.15e-37 | 132 |
| Msa0781570 | AT2G30840.2 | 41.420 | 169 | 63 | 2 | 14 | 146 | 2 | 170 | 3.20e-37 | 130 |
| Msa0781570 | AT2G30840.1 | 41.420 | 169 | 63 | 2 | 14 | 146 | 2 | 170 | 9.97e-37 | 130 |
| Msa0781570 | AT2G30840.3 | 41.420 | 169 | 63 | 2 | 14 | 146 | 2 | 170 | 1.16e-36 | 129 |
| Msa0781570 | AT1G06650.1 | 35.838 | 173 | 74 | 3 | 14 | 149 | 7 | 179 | 1.62e-35 | 125 |
| Msa0781570 | AT1G06620.2 | 39.264 | 163 | 66 | 2 | 15 | 144 | 9 | 171 | 1.63e-35 | 125 |
| Msa0781570 | AT1G06650.2 | 35.838 | 173 | 74 | 3 | 14 | 149 | 7 | 179 | 6.22e-35 | 125 |
| Msa0781570 | AT1G06640.3 | 36.842 | 171 | 71 | 2 | 16 | 149 | 9 | 179 | 7.68e-35 | 123 |
| Msa0781570 | AT1G04350.1 | 38.750 | 160 | 66 | 3 | 17 | 144 | 6 | 165 | 8.91e-35 | 124 |
| Msa0781570 | AT1G03410.2 | 40.120 | 167 | 64 | 4 | 16 | 146 | 3 | 169 | 1.33e-34 | 124 |
| Msa0781570 | AT1G06640.2 | 35.673 | 171 | 73 | 2 | 16 | 149 | 9 | 179 | 1.37e-34 | 123 |
| Msa0781570 | AT1G06620.1 | 39.264 | 163 | 66 | 2 | 15 | 144 | 9 | 171 | 1.50e-34 | 124 |
| Msa0781570 | AT1G03400.1 | 39.490 | 157 | 69 | 2 | 16 | 146 | 3 | 159 | 1.80e-34 | 124 |
| Msa0781570 | AT1G03410.1 | 39.412 | 170 | 67 | 4 | 16 | 149 | 40 | 209 | 2.19e-34 | 124 |
| Msa0781570 | AT5G59540.2 | 36.364 | 187 | 80 | 5 | 13 | 160 | 5 | 191 | 3.77e-34 | 121 |
| Msa0781570 | AT1G03400.2 | 38.750 | 160 | 72 | 2 | 16 | 149 | 3 | 162 | 3.99e-34 | 123 |
| Msa0781570 | AT1G06640.1 | 36.842 | 171 | 71 | 2 | 16 | 149 | 9 | 179 | 5.48e-34 | 122 |
| Msa0781570 | AT5G59540.1 | 36.364 | 187 | 80 | 5 | 13 | 160 | 5 | 191 | 1.62e-33 | 121 |
| Msa0781570 | AT2G30830.1 | 37.195 | 164 | 71 | 2 | 15 | 146 | 3 | 166 | 9.97e-32 | 116 |
| Msa0781570 | AT5G59530.1 | 39.655 | 174 | 66 | 6 | 13 | 149 | 4 | 175 | 2.53e-31 | 115 |
| Msa0781570 | AT3G61400.2 | 35.329 | 167 | 70 | 3 | 18 | 146 | 10 | 176 | 1.08e-30 | 112 |
| Msa0781570 | AT3G61400.1 | 35.329 | 167 | 70 | 3 | 18 | 146 | 10 | 176 | 4.23e-30 | 112 |
| Msa0781570 | AT1G06645.1 | 37.107 | 159 | 63 | 3 | 16 | 137 | 22 | 180 | 5.56e-29 | 109 |
| Msa0781570 | AT5G43450.2 | 32.727 | 165 | 78 | 2 | 13 | 144 | 4 | 168 | 1.69e-25 | 99.0 |
| Msa0781570 | AT5G43450.1 | 32.727 | 165 | 78 | 2 | 13 | 144 | 4 | 168 | 5.81e-25 | 99.0 |
| Msa0781570 | AT1G04380.2 | 44.211 | 95 | 50 | 1 | 69 | 160 | 76 | 170 | 1.90e-23 | 93.2 |
| Msa0781570 | AT5G43440.2 | 31.737 | 167 | 78 | 4 | 19 | 149 | 10 | 176 | 4.24e-23 | 92.8 |
| Msa0781570 | AT1G04380.1 | 44.211 | 95 | 50 | 1 | 69 | 160 | 76 | 170 | 4.26e-23 | 93.6 |
| Msa0781570 | AT5G43440.1 | 31.737 | 167 | 78 | 4 | 19 | 149 | 10 | 176 | 1.62e-22 | 92.0 |
Find 28 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATTAGCTTCCTCTAAT+TGG | 0.221971 | 5_2:+64141465 | None:intergenic |
| ATTATTTATTATTCCAATAT+TGG | 0.228107 | 5_2:-64140959 | Msa0781570:CDS |
| AAGAATTGCCTCAAGTATTT+AGG | 0.231549 | 5_2:-64140862 | Msa0781570:intron |
| TGAGGCAATTCTTCTGGTTT+TGG | 0.234939 | 5_2:+64140872 | None:intergenic |
| TTCTACATACAAACCAATAT+TGG | 0.244625 | 5_2:+64140946 | None:intergenic |
| GTCTTGGATGAGATGATTAA+TGG | 0.307431 | 5_2:-64141052 | Msa0781570:CDS |
| AATACTTGAGGCAATTCTTC+TGG | 0.322461 | 5_2:+64140866 | None:intergenic |
| GCTATTTGGAGAGACTCTTT+TGG | 0.335560 | 5_2:-64140917 | Msa0781570:CDS |
| ATCTCATCCAAGACATTAAT+AGG | 0.339754 | 5_2:+64141061 | None:intergenic |
| GCTTCCTCTAATTGGTTTGT+TGG | 0.363296 | 5_2:+64141473 | None:intergenic |
| TGGAATTCCTATTAATGTCT+TGG | 0.396054 | 5_2:-64141068 | Msa0781570:CDS |
| AATTCGTAGGTTTCATGAAC+AGG | 0.408761 | 5_2:-64141029 | Msa0781570:CDS |
| TCGATCCAACTTGAGTATTC+CGG | 0.418237 | 5_2:-64141303 | Msa0781570:intron |
| TTCTTCCAGGTGATTAATCA+TGG | 0.428736 | 5_2:-64141088 | Msa0781570:intron |
| GAAACCAACAAACCAATTAG+AGG | 0.462049 | 5_2:-64141477 | Msa0781570:CDS |
| GAATCGAAAGCTGGTGTAAG+AGG | 0.475343 | 5_2:-64141404 | Msa0781570:CDS |
| ACCTTTGATGAATCGAAAGC+TGG | 0.535722 | 5_2:-64141413 | Msa0781570:CDS |
| TATGACCGGAATACTCAAGT+TGG | 0.552151 | 5_2:+64141298 | None:intergenic |
| ACCAGCTTTCGATTCATCAA+AGG | 0.554563 | 5_2:+64141412 | None:intergenic |
| GTAAGAGGTCTTATAGAGTC+CGG | 0.564520 | 5_2:-64141389 | Msa0781570:CDS |
| ATGAACAGGATGTTGATGAA+AGG | 0.568623 | 5_2:-64141015 | Msa0781570:CDS |
| AGATGATTAATGGAATTCGT+AGG | 0.577218 | 5_2:-64141042 | Msa0781570:CDS |
| GCGTGGAATCTTTGTTACAC+CGG | 0.579338 | 5_2:+64141370 | None:intergenic |
| AAATAATACCTAAATACTTG+AGG | 0.619921 | 5_2:+64140854 | None:intergenic |
| ATGTGGCTTCTCAACGTCGG+TGG | 0.623158 | 5_2:-64138749 | Msa0781570:CDS |
| CAGTGTTGTTCAATGTGTCA+CGG | 0.634706 | 5_2:+64141339 | None:intergenic |
| GTGTCACGGTAGAACATGCG+TGG | 0.641455 | 5_2:+64141353 | None:intergenic |
| CAGATGTGGCTTCTCAACGT+CGG | 0.691120 | 5_2:-64138752 | Msa0781570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTTATTATTCCAATAT+TGG | - | chr5_2:64139271-64139290 | Msa0781570:intron | 10.0% |
| !!! | TTTTTTTTAAAATAGTTTAG+TGG | - | chr5_2:64139429-64139448 | Msa0781570:intron | 10.0% |
| !! | ATTTCAATTATATAAACTAA+AGG | - | chr5_2:64139616-64139635 | Msa0781570:intron | 10.0% |
| !!! | CATATTTTAAACTTTTATTT+TGG | - | chr5_2:64139642-64139661 | Msa0781570:intron | 10.0% |
| !!! | TATTTTAAACTTTTATTTTG+GGG | - | chr5_2:64139644-64139663 | Msa0781570:intron | 10.0% |
| !!! | AAATTTATAAGTTTGATTTT+TGG | + | chr5_2:64140658-64140677 | None:intergenic | 10.0% |
| !!! | ATTTTATTATAATTTTGGAT+TGG | + | chr5_2:64141101-64141120 | None:intergenic | 10.0% |
| !!! | CTTTGAAAATTTAAAAATTG+CGG | - | chr5_2:64139499-64139518 | Msa0781570:intron | 15.0% |
| !! | TTTGAAAATTTAAAAATTGC+GGG | - | chr5_2:64139500-64139519 | Msa0781570:intron | 15.0% |
| !!! | TTTACAAGTAAAGTATTTAA+TGG | - | chr5_2:64140022-64140041 | Msa0781570:intron | 15.0% |
| !!! | TTACTATAGACTTTTTTTTT+TGG | - | chr5_2:64140045-64140064 | Msa0781570:intron | 15.0% |
| !! | TTGGAAAAAAATAAATAAAG+TGG | - | chr5_2:64140929-64140948 | Msa0781570:CDS | 15.0% |
| !!! | GGTACATTTTATTATAATTT+TGG | + | chr5_2:64141106-64141125 | None:intergenic | 15.0% |
| !!! | TAATTTTCTTTGTCAAATCA+CGG | + | chr5_2:64139255-64139274 | None:intergenic | 20.0% |
| !! | AAATAATACCTAAATACTTG+AGG | + | chr5_2:64139379-64139398 | None:intergenic | 20.0% |
| !!! | TTTATAAGTTTGATTTTTGG+TGG | + | chr5_2:64140655-64140674 | None:intergenic | 20.0% |
| !! | AAAACATTATTTCAATCTTC+AGG | + | chr5_2:64140696-64140715 | None:intergenic | 20.0% |
| !! | CATTTCATAAGGTTATTATT+AGG | - | chr5_2:64140857-64140876 | Msa0781570:intron | 20.0% |
| !!! | ATATTTTATTTTGAGTGATC+AGG | - | chr5_2:64141001-64141020 | Msa0781570:CDS | 20.0% |
| ! | NNNNNNNNGCATGCAAAGAT+TGG | - | chr5_2:64139116-64139135 | Msa0781570:intron | 25.0% |
| ! | NNNNNNNGCATGCAAAGATT+GGG | - | chr5_2:64139117-64139136 | Msa0781570:intron | 25.0% |
| ! | TTCTACATACAAACCAATAT+TGG | + | chr5_2:64139287-64139306 | None:intergenic | 25.0% |
| ! | ATGTAGAAAAATCTGCTATT+TGG | - | chr5_2:64139299-64139318 | Msa0781570:intron | 25.0% |
| !!! | ATGAGTTTTATTAGTAGTAC+TGG | - | chr5_2:64139583-64139602 | Msa0781570:intron | 25.0% |
| !! | ATACTTTTACAAGACCAAAT+TGG | - | chr5_2:64139918-64139937 | Msa0781570:intron | 25.0% |
| !!! | TATTACTATTGCACTTTTTG+AGG | - | chr5_2:64140186-64140205 | Msa0781570:intron | 25.0% |
| ! | GAAGTTTCATCAAAGATTTA+TGG | - | chr5_2:64140485-64140504 | Msa0781570:intron | 25.0% |
| ! | TGTTTATTTCACAACTTGAA+AGG | + | chr5_2:64140626-64140645 | None:intergenic | 25.0% |
| ! | TACAGCATAAAATAGCTAAA+AGG | + | chr5_2:64140731-64140750 | None:intergenic | 25.0% |
| ! | ATTAGGTCCCATTATTAATA+AGG | - | chr5_2:64140874-64140893 | Msa0781570:CDS | 25.0% |
| ! | TTGGCAACCTTATTAATAAT+GGG | + | chr5_2:64140884-64140903 | None:intergenic | 25.0% |
| ! | AGAATACCCAAATTAATAGA+GGG | + | chr5_2:64141134-64141153 | None:intergenic | 25.0% |
| ! | TAGAATACCCAAATTAATAG+AGG | + | chr5_2:64141135-64141154 | None:intergenic | 25.0% |
| ! | TAACTAGAAACCACATATAT+GGG | + | chr5_2:64141324-64141343 | None:intergenic | 25.0% |
| !!! | ATTTTAACATAACAATGGAG+TGG | + | chr5_2:64141426-64141445 | None:intergenic | 25.0% |
| !!! | GATGCATTTTAACATAACAA+TGG | + | chr5_2:64141431-64141450 | None:intergenic | 25.0% |
| ! | TTGTTATGTTAAAATGCATC+AGG | - | chr5_2:64141431-64141450 | Msa0781570:CDS | 25.0% |
| ! | AATCATTAGCTTCCTCTAAT+TGG | + | chr5_2:64138768-64138787 | None:intergenic | 30.0% |
| ! | TTCAGCTTTTCTATCATAAC+TGG | + | chr5_2:64138791-64138810 | None:intergenic | 30.0% |
| TGGAATTCCTATTAATGTCT+TGG | - | chr5_2:64139162-64139181 | Msa0781570:intron | 30.0% | |
| ATCTCATCCAAGACATTAAT+AGG | + | chr5_2:64139172-64139191 | None:intergenic | 30.0% | |
| AGATGATTAATGGAATTCGT+AGG | - | chr5_2:64139188-64139207 | Msa0781570:intron | 30.0% | |
| AAGAATTGCCTCAAGTATTT+AGG | - | chr5_2:64139368-64139387 | Msa0781570:intron | 30.0% | |
| TTGATATCTTAAGAGCTCTA+GGG | + | chr5_2:64139539-64139558 | None:intergenic | 30.0% | |
| TTTGATATCTTAAGAGCTCT+AGG | + | chr5_2:64139540-64139559 | None:intergenic | 30.0% | |
| TCCAAGAAAATAATGTCACT+CGG | - | chr5_2:64139726-64139745 | Msa0781570:intron | 30.0% | |
| !!! | ACTTTTTGAGTTATTGTCAG+AGG | - | chr5_2:64139755-64139774 | Msa0781570:intron | 30.0% |
| AAGTTCTTCATGAGAATCAA+TGG | - | chr5_2:64139949-64139968 | Msa0781570:intron | 30.0% | |
| AGTTCTTCATGAGAATCAAT+GGG | - | chr5_2:64139950-64139969 | Msa0781570:intron | 30.0% | |
| ATTTCGTCAGTGTTTATCAT+CGG | - | chr5_2:64140390-64140409 | Msa0781570:intron | 30.0% | |
| ATCTTTGATGAAACTTCAGT+TGG | + | chr5_2:64140482-64140501 | None:intergenic | 30.0% | |
| AAAGATTTATGGTCCTATCA+AGG | - | chr5_2:64140496-64140515 | Msa0781570:intron | 30.0% | |
| CATAAAAGTTGCAGAATACA+TGG | - | chr5_2:64140556-64140575 | Msa0781570:intron | 30.0% | |
| !!! | ATGGACAATCGTTTTAAGAA+GGG | - | chr5_2:64140575-64140594 | Msa0781570:intron | 30.0% |
| !! | ATGTAAATGACGCTTGTTAT+TGG | + | chr5_2:64140762-64140781 | None:intergenic | 30.0% |
| !! | GTTTTGGTCAACATTTCATA+AGG | - | chr5_2:64140846-64140865 | Msa0781570:intron | 30.0% |
| CTTGGCAACCTTATTAATAA+TGG | + | chr5_2:64140885-64140904 | None:intergenic | 30.0% | |
| AACATAAACGTCACATTGAT+AGG | + | chr5_2:64140909-64140928 | None:intergenic | 30.0% | |
| ! | TCAATGTGACGTTTATGTTT+TGG | - | chr5_2:64140910-64140929 | Msa0781570:CDS | 30.0% |
| AAAGTGGAGTTTATGTTTAG+TGG | - | chr5_2:64140945-64140964 | Msa0781570:CDS | 30.0% | |
| !! | TTTTGAGTGATCAGGTAAAT+TGG | - | chr5_2:64141009-64141028 | Msa0781570:CDS | 30.0% |
| !!! | TGTGGTTCTTTTAAGATATG+TGG | - | chr5_2:64141290-64141309 | Msa0781570:intron | 30.0% |
| GTAACTAGAAACCACATATA+TGG | + | chr5_2:64141325-64141344 | None:intergenic | 30.0% | |
| ! | TCAGTTGAAATTGTTTTCGT+CGG | - | chr5_2:64141361-64141380 | Msa0781570:CDS | 30.0% |
| ! | TATTTTCAAAATCGCAGATG+TGG | - | chr5_2:64141464-64141483 | Msa0781570:CDS | 30.0% |
| GAAACCAACAAACCAATTAG+AGG | - | chr5_2:64138753-64138772 | Msa0781570:intron | 35.0% | |
| !! | ATGTCTTTGAGATCTATGAC+CGG | + | chr5_2:64138949-64138968 | None:intergenic | 35.0% |
| TTCTTCCAGGTGATTAATCA+TGG | - | chr5_2:64139142-64139161 | Msa0781570:intron | 35.0% | |
| GAATTCCATGATTAATCACC+TGG | + | chr5_2:64139150-64139169 | None:intergenic | 35.0% | |
| GTCTTGGATGAGATGATTAA+TGG | - | chr5_2:64139178-64139197 | Msa0781570:intron | 35.0% | |
| AATTCGTAGGTTTCATGAAC+AGG | - | chr5_2:64139201-64139220 | Msa0781570:intron | 35.0% | |
| ! | ATGAACAGGATGTTGATGAA+AGG | - | chr5_2:64139215-64139234 | Msa0781570:intron | 35.0% |
| AATACTTGAGGCAATTCTTC+TGG | + | chr5_2:64139367-64139386 | None:intergenic | 35.0% | |
| ! | TCCGAGTGACATTATTTTCT+TGG | + | chr5_2:64139730-64139749 | None:intergenic | 35.0% |
| ! | CAGCACAACTCAATTCTTTT+AGG | + | chr5_2:64139803-64139822 | None:intergenic | 35.0% |
| ! | AAAGAATTGAGTTGTGCTGA+AGG | - | chr5_2:64139804-64139823 | Msa0781570:intron | 35.0% |
| ! | GCTGAAGGACTTTTTATTCA+AGG | - | chr5_2:64139819-64139838 | Msa0781570:intron | 35.0% |
| ! | CTTTTACAAGACCAAATTGG+TGG | - | chr5_2:64139921-64139940 | Msa0781570:intron | 35.0% |
| GTTTGAGTAAGTGATCTGAA+AGG | - | chr5_2:64140228-64140247 | Msa0781570:intron | 35.0% | |
| TTTCGTCAGTGTTTATCATC+GGG | - | chr5_2:64140391-64140410 | Msa0781570:intron | 35.0% | |
| TCATAAAGGACCAAGAGTTT+CGG | - | chr5_2:64140427-64140446 | Msa0781570:intron | 35.0% | |
| AAGAAAATCCACCAGTCTAT+AGG | - | chr5_2:64140531-64140550 | Msa0781570:intron | 35.0% | |
| AGAAAATCCACCAGTCTATA+GGG | - | chr5_2:64140532-64140551 | Msa0781570:intron | 35.0% | |
| ! | ACTTTTATGTCCCTATAGAC+TGG | + | chr5_2:64140545-64140564 | None:intergenic | 35.0% |
| !!! | CATGGACAATCGTTTTAAGA+AGG | - | chr5_2:64140574-64140593 | Msa0781570:intron | 35.0% |
| !!! | TGGACAATCGTTTTAAGAAG+GGG | - | chr5_2:64140576-64140595 | Msa0781570:intron | 35.0% |
| AGCAATAACACAACCTTGAT+TGG | - | chr5_2:64140785-64140804 | Msa0781570:intron | 35.0% | |
| AACCTTGATTGGATGTTGTA+AGG | - | chr5_2:64140796-64140815 | Msa0781570:intron | 35.0% | |
| AACCTTACAACATCCAATCA+AGG | + | chr5_2:64140801-64140820 | None:intergenic | 35.0% | |
| GTTATAGACTTGTGTAGTTG+TGG | - | chr5_2:64140824-64140843 | Msa0781570:intron | 35.0% | |
| CTACGACCCTCTATTAATTT+GGG | - | chr5_2:64141125-64141144 | Msa0781570:intron | 35.0% | |
| !! | GTATTCTAAAGCTCTCTAGT+GGG | - | chr5_2:64141147-64141166 | Msa0781570:intron | 35.0% |
| !! | TATGTGGTTTCTAGTTACGA+AGG | - | chr5_2:64141327-64141346 | Msa0781570:CDS | 35.0% |
| !!! | TTTTCATGAGGTACTGTTCA+TGG | - | chr5_2:64141384-64141403 | Msa0781570:CDS | 35.0% |
| TTAACATAACAATGGAGTGG+TGG | + | chr5_2:64141423-64141442 | None:intergenic | 35.0% | |
| TGTTAAAATGCATCAGGATC+TGG | - | chr5_2:64141437-64141456 | Msa0781570:CDS | 35.0% | |
| !! | GCTTCCTCTAATTGGTTTGT+TGG | + | chr5_2:64138760-64138779 | None:intergenic | 40.0% |
| ACCTTTGATGAATCGAAAGC+TGG | - | chr5_2:64138817-64138836 | Msa0781570:intron | 40.0% | |
| ACCAGCTTTCGATTCATCAA+AGG | + | chr5_2:64138821-64138840 | None:intergenic | 40.0% | |
| ! | GTAAGAGGTCTTATAGAGTC+CGG | - | chr5_2:64138841-64138860 | Msa0781570:intron | 40.0% |
| ! | CAGTGTTGTTCAATGTGTCA+CGG | + | chr5_2:64138894-64138913 | None:intergenic | 40.0% |
| TCGATCCAACTTGAGTATTC+CGG | - | chr5_2:64138927-64138946 | Msa0781570:intron | 40.0% | |
| TATGACCGGAATACTCAAGT+TGG | + | chr5_2:64138935-64138954 | None:intergenic | 40.0% | |
| CAATCATGCTATGCGTATTG+AGG | - | chr5_2:64138981-64139000 | Msa0781570:intron | 40.0% | |
| GCTATGCGTATTGAGGTAAT+CGG | - | chr5_2:64138988-64139007 | Msa0781570:intron | 40.0% | |
| ! | GCTATTTGGAGAGACTCTTT+TGG | - | chr5_2:64139313-64139332 | Msa0781570:intron | 40.0% |
| ! | AGACTCTTTTGGATGTACCA+TGG | - | chr5_2:64139324-64139343 | Msa0781570:intron | 40.0% |
| !!! | TGAGGCAATTCTTCTGGTTT+TGG | + | chr5_2:64139361-64139380 | None:intergenic | 40.0% |
| TCTGTACCCATAGTTAACTC+TGG | + | chr5_2:64139870-64139889 | None:intergenic | 40.0% | |
| GAACTTGAAGACCACCAATT+TGG | + | chr5_2:64139935-64139954 | None:intergenic | 40.0% | |
| GTTAATGTTCCTCCTCTACA+TGG | - | chr5_2:64139972-64139991 | Msa0781570:intron | 40.0% | |
| GTACTACCACTAAATGAGTC+TGG | - | chr5_2:64140260-64140279 | Msa0781570:intron | 40.0% | |
| ACTCTTGGTCCTTTATGACT+TGG | + | chr5_2:64140425-64140444 | None:intergenic | 40.0% | |
| AAACTAGCTACCGAAACTCT+TGG | + | chr5_2:64140440-64140459 | None:intergenic | 40.0% | |
| TCTGATGTCAGTTCCTTGAT+AGG | + | chr5_2:64140512-64140531 | None:intergenic | 40.0% | |
| TTTATGTCCCTATAGACTGG+TGG | + | chr5_2:64140542-64140561 | None:intergenic | 40.0% | |
| GATTGGATGTTGTAAGGTTG+TGG | - | chr5_2:64140802-64140821 | Msa0781570:intron | 40.0% | |
| ! | GACTTGTGTAGTTGTGGTTT+TGG | - | chr5_2:64140830-64140849 | Msa0781570:intron | 40.0% |
| AACGTCACATTGATAGGACT+TGG | + | chr5_2:64140903-64140922 | None:intergenic | 40.0% | |
| CCAAATTAATAGAGGGTCGT+AGG | + | chr5_2:64141127-64141146 | None:intergenic | 40.0% | |
| CCTACGACCCTCTATTAATT+TGG | - | chr5_2:64141124-64141143 | Msa0781570:intron | 40.0% | |
| !! | GGTATTCTAAAGCTCTCTAG+TGG | - | chr5_2:64141146-64141165 | Msa0781570:intron | 40.0% |
| !! | CTCGTTTTGTTACTGACACA+AGG | - | chr5_2:64141186-64141205 | Msa0781570:intron | 40.0% |
| !! | GTTTTGTTACTGACACAAGG+TGG | - | chr5_2:64141189-64141208 | Msa0781570:intron | 40.0% |
| !! | TGGTTTCTAGTTACGAAGGT+TGG | - | chr5_2:64141331-64141350 | Msa0781570:CDS | 40.0% |
| !!! | TGTTTTCGTCGGTTTTCATG+AGG | - | chr5_2:64141372-64141391 | Msa0781570:CDS | 40.0% |
| GAATCGAAAGCTGGTGTAAG+AGG | - | chr5_2:64138826-64138845 | Msa0781570:intron | 45.0% | |
| GCGTGGAATCTTTGTTACAC+CGG | + | chr5_2:64138863-64138882 | None:intergenic | 45.0% | |
| !!! | TCTTCTGGTTTTGGTGGAGT+AGG | + | chr5_2:64139352-64139371 | None:intergenic | 45.0% |
| !!! | GGCAATTCTTCTGGTTTTGG+TGG | + | chr5_2:64139358-64139377 | None:intergenic | 45.0% |
| GAGTTATTGTCAGAGGCTCT+TGG | - | chr5_2:64139762-64139781 | Msa0781570:intron | 45.0% | |
| TCCTGAGCCAGAGTTAACTA+TGG | - | chr5_2:64139860-64139879 | Msa0781570:intron | 45.0% | |
| CCTGAGCCAGAGTTAACTAT+GGG | - | chr5_2:64139861-64139880 | Msa0781570:intron | 45.0% | |
| ACAACAAGAGCTCCATGTAG+AGG | + | chr5_2:64139987-64140006 | None:intergenic | 45.0% | |
| ! | GGAGCTCTTGTTGTCAACAT+AGG | - | chr5_2:64139993-64140012 | Msa0781570:intron | 45.0% |
| GCTAGTCCAGACTCATTTAG+TGG | + | chr5_2:64140269-64140288 | None:intergenic | 45.0% | |
| GTCTTGCCACCAAGTCATAA+AGG | - | chr5_2:64140413-64140432 | Msa0781570:intron | 45.0% | |
| ! | CTTGGTCCTTTATGACTTGG+TGG | + | chr5_2:64140422-64140441 | None:intergenic | 45.0% |
| !!! | CGTTTTAAGAAGGGGCATGA+TGG | - | chr5_2:64140584-64140603 | Msa0781570:intron | 45.0% |
| !! | GCATGATGGAAGCTCTAAGT+TGG | - | chr5_2:64140598-64140617 | Msa0781570:intron | 45.0% |
| !! | CTAGTGGGTGTTGAAGATTG+TGG | - | chr5_2:64141162-64141181 | Msa0781570:intron | 45.0% |
| CCACTTGAAGTAGTCTCAGA+AGG | + | chr5_2:64141233-64141252 | None:intergenic | 45.0% | |
| !! | CCTTCTGAGACTACTTCAAG+TGG | - | chr5_2:64141230-64141249 | Msa0781570:intron | 45.0% |
| AACCTATTTGCTCCGTCATG+CGG | - | chr5_2:64141262-64141281 | Msa0781570:intron | 45.0% | |
| GGTTTCTCGACCCATATATG+TGG | - | chr5_2:64141311-64141330 | Msa0781570:CDS | 45.0% | |
| !! | TCATGAGGTACTGTTCATGG+TGG | - | chr5_2:64141387-64141406 | Msa0781570:CDS | 45.0% |
| !!! | NNNNNNNNNNATTTTTAAGT+TGG | + | chr5_2:64139014-64139033 | None:intergenic | 5.0% |
| !!! | ATATTTTAAACTTTTATTTT+GGG | - | chr5_2:64139643-64139662 | Msa0781570:intron | 5.0% |
| CAAAGATTGGGGGTTCTTCC+AGG | - | chr5_2:64139129-64139148 | Msa0781570:intron | 50.0% | |
| ! | TTTTGGTGGAGTAGGAGCCA+TGG | + | chr5_2:64139344-64139363 | None:intergenic | 50.0% |
| ! | GTTAACTCTGGCTCAGGACA+TGG | + | chr5_2:64139858-64139877 | None:intergenic | 50.0% |
| ! | CCCATAGTTAACTCTGGCTC+AGG | + | chr5_2:64139864-64139883 | None:intergenic | 50.0% |
| ACAAGAGCTCCATGTAGAGG+AGG | + | chr5_2:64139984-64140003 | None:intergenic | 50.0% | |
| GGAGCAAATAGGTTCGTCGA+CGG | + | chr5_2:64141256-64141275 | None:intergenic | 50.0% | |
| ! | ATCCGCATGACGGAGCAAAT+AGG | + | chr5_2:64141267-64141286 | None:intergenic | 50.0% |
| AACCACATCGATCCGCATGA+CGG | + | chr5_2:64141277-64141296 | None:intergenic | 50.0% | |
| !! | TGAGGTACTGTTCATGGTGG+CGG | - | chr5_2:64141390-64141409 | Msa0781570:CDS | 50.0% |
| CAGATGTGGCTTCTCAACGT+CGG | - | chr5_2:64141478-64141497 | Msa0781570:CDS | 50.0% | |
| GTGTCACGGTAGAACATGCG+TGG | + | chr5_2:64138880-64138899 | None:intergenic | 55.0% | |
| !! | CTTAAGAGCTCTAGGGACGC+AGG | + | chr5_2:64139532-64139551 | None:intergenic | 55.0% |
| ! | AACTCTGGCTCAGGACATGG+TGG | + | chr5_2:64139855-64139874 | None:intergenic | 55.0% |
| !! | GTACTGTTCATGGTGGCGGT+GGG | - | chr5_2:64141394-64141413 | Msa0781570:CDS | 55.0% |
| ATGTGGCTTCTCAACGTCGG+TGG | - | chr5_2:64141481-64141500 | Msa0781570:CDS | 55.0% | |
| CTCCGTCATGCGGATCGATG+TGG | - | chr5_2:64141272-64141291 | Msa0781570:intron | 60.0% | |
| !! | GGTACTGTTCATGGTGGCGG+TGG | - | chr5_2:64141393-64141412 | Msa0781570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 64138745 | 64141507 | 64138745 | ID=Msa0781570;Name=Msa0781570 |
| chr5_2 | mRNA | 64138745 | 64141507 | 64138745 | ID=Msa0781570-mRNA-1;Parent=Msa0781570;Name=Msa0781570-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.4|0|0.2|5|0|160 |
| chr5_2 | exon | 64141304 | 64141507 | 64141304 | ID=Msa0781570-mRNA-1:exon:19175;Parent=Msa0781570-mRNA-1 |
| chr5_2 | exon | 64140863 | 64141101 | 64140863 | ID=Msa0781570-mRNA-1:exon:19174;Parent=Msa0781570-mRNA-1 |
| chr5_2 | exon | 64139230 | 64139236 | 64139230 | ID=Msa0781570-mRNA-1:exon:19173;Parent=Msa0781570-mRNA-1 |
| chr5_2 | exon | 64138794 | 64138799 | 64138794 | ID=Msa0781570-mRNA-1:exon:19172;Parent=Msa0781570-mRNA-1 |
| chr5_2 | exon | 64138745 | 64138771 | 64138745 | ID=Msa0781570-mRNA-1:exon:19171;Parent=Msa0781570-mRNA-1 |
| chr5_2 | CDS | 64141304 | 64141507 | 64141304 | ID=Msa0781570-mRNA-1:cds;Parent=Msa0781570-mRNA-1 |
| chr5_2 | CDS | 64140863 | 64141101 | 64140863 | ID=Msa0781570-mRNA-1:cds;Parent=Msa0781570-mRNA-1 |
| chr5_2 | CDS | 64139230 | 64139236 | 64139230 | ID=Msa0781570-mRNA-1:cds;Parent=Msa0781570-mRNA-1 |
| chr5_2 | CDS | 64138794 | 64138799 | 64138794 | ID=Msa0781570-mRNA-1:cds;Parent=Msa0781570-mRNA-1 |
| chr5_2 | CDS | 64138745 | 64138771 | 64138745 | ID=Msa0781570-mRNA-1:cds;Parent=Msa0781570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
