AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214210 MtrunA17_Chr4g0062121 98.469 392 6 0 1 392 1 392 0.0 777
Msa1214210 MtrunA17_Chr4g0062521 94.194 155 6 1 3 157 1 152 2.80e-95 281
Msa1214210 MtrunA17_Chr4g0062141 91.608 143 12 0 1 143 1 143 7.24e-86 257
Msa1214210 MtrunA17_Chr3g0121591 28.395 162 103 3 189 349 318 467 1.78e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214210 AT5G23060.1 69.898 392 106 7 7 392 2 387 0.0 542
Msa1214210 AT5G23060.2 69.775 311 86 5 7 311 2 310 6.88e-152 431
Msa1214210 AT3G59780.1 29.630 162 101 4 189 349 376 525 1.94e-17 84.7

Find 121 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTTCAGGTGGTTGGTTC+TGG 0.203917 8_1:+74715876 Msa1214210:CDS
CACGAGTGGAAGAGTTTAAA+AGG 0.233890 8_1:-74718584 None:intergenic
AAGTGCTTCTTGAGCCTTCT+TGG 0.258220 8_1:-74716036 None:intergenic
ACCTCTTGTTTCCTCCTATC+TGG 0.273177 8_1:+74717211 Msa1214210:CDS
TTAAATTGGTTTGTAATAGA+TGG 0.275914 8_1:-74715182 None:intergenic
GCAGGTGTTAGAGGAGGTTT+TGG 0.305441 8_1:+74718394 Msa1214210:CDS
ATAGTTGCTAGAACACTAAC+AGG 0.310201 8_1:+74718238 Msa1214210:CDS
AACACCTGCAGGGATGATTC+TGG 0.312131 8_1:-74718380 None:intergenic
ACAGCAGCTCTAGCTTCATT+TGG 0.354989 8_1:-74715702 None:intergenic
AGCAAACCTTAGCAGCTGTT+TGG 0.357428 8_1:-74716079 None:intergenic
CAAGAAGCACTTCAAAGTTC+TGG 0.357902 8_1:+74716047 Msa1214210:CDS
GCAAACCTTAGCAGCTGTTT+GGG 0.363379 8_1:-74716078 None:intergenic
TGTCCAGCCTGCTGCACAAT+TGG 0.364015 8_1:-74715972 None:intergenic
ATACACATGGAGTGATAATA+AGG 0.367130 8_1:-74719039 None:intergenic
ATCATCCCTGCAGGTGTTAG+AGG 0.379861 8_1:+74718385 Msa1214210:CDS
GAGTGATAATAAGGTGAGTA+AGG 0.387438 8_1:-74719030 None:intergenic
TCAGATCCTACCATGATTGC+TGG 0.395603 8_1:+74717162 Msa1214210:CDS
AGAAGAAACAATTTGGTCCT+TGG 0.396949 8_1:-74715733 None:intergenic
AGGCACCAACATTGTGATCT+TGG 0.398969 8_1:+74717872 Msa1214210:CDS
TTCGAGGATTTGATTAATCA+AGG 0.402759 8_1:-74718521 None:intergenic
TTTAGTTGTATCCGATATGA+TGG 0.406304 8_1:-74718663 None:intergenic
TCTACTCAGAAACTTCTTCC+TGG 0.410143 8_1:+74718433 Msa1214210:CDS
TTTAATGGTGGTTATAATGA+AGG 0.411666 8_1:+74718706 Msa1214210:three_prime_UTR
ACCATGATTGCTGGAACAGC+TGG 0.423707 8_1:+74717171 Msa1214210:CDS
GCAGACTATTGATCAGGTTC+AGG 0.429751 8_1:+74715863 Msa1214210:CDS
GTAGGGAGTGCTTTGAAGCC+TGG 0.435558 8_1:+74715933 Msa1214210:CDS
TTAGTTGCTAGTGGTTGGTT+TGG 0.438252 8_1:-74715512 None:intergenic
AAGAAGTTCCAAACAAAATA+CGG 0.440195 8_1:+74717772 Msa1214210:CDS
GGCGTTGCCAATTGTGCAGC+AGG 0.443721 8_1:+74715965 Msa1214210:CDS
TTTGTAACCGCGAAAATTGA+AGG 0.446381 8_1:-74717244 None:intergenic
CTTGGCACCTTCAATCACCT+TGG 0.446939 8_1:-74717103 None:intergenic
TTCCACTCGTGTACGCTTAG+TGG 0.450496 8_1:+74718596 Msa1214210:three_prime_UTR
GGGTGAGAGAAGAAACAATT+TGG 0.450976 8_1:-74715740 None:intergenic
TCCATGGTTGATGAGGCTAT+TGG 0.451797 8_1:-74717126 None:intergenic
GGATGGTTACAGAGTAGATT+AGG 0.455550 8_1:+74718313 Msa1214210:CDS
TTGCCAATTGTGCAGCAGGC+TGG 0.458405 8_1:+74715969 Msa1214210:CDS
ATTGATCAGGTTCAGGTGGT+TGG 0.466359 8_1:+74715870 Msa1214210:CDS
AGATGGAAGGCGAGGAATAC+CGG 0.469370 8_1:-74717474 None:intergenic
CTACTCAGAAACTTCTTCCT+GGG 0.474253 8_1:+74718434 Msa1214210:CDS
GTGGAAGGAGATGGAAGAGA+AGG 0.477837 8_1:-74715582 None:intergenic
GCAGCTCTAGCTTCATTTGG+AGG 0.478964 8_1:-74715699 None:intergenic
ACAAAATACGGGGACTGGTA+AGG 0.484660 8_1:+74717784 Msa1214210:CDS
GAAAAGAGCAAGTAGTGAAA+TGG 0.487604 8_1:-74715673 None:intergenic
TCCAGCTGTTCCAGCAATCA+TGG 0.492894 8_1:-74717172 None:intergenic
GCTAGAACACTAACAGGGCT+TGG 0.499873 8_1:+74718244 Msa1214210:CDS
TTGGAAGCCTCAGAGAAGGC+TGG 0.503167 8_1:-74716017 None:intergenic
GGTGATTGTGTGAGGTAAAG+TGG 0.504202 8_1:-74715601 None:intergenic
CATTGTTAGTTGCTAGTGGT+TGG 0.506706 8_1:-74715517 None:intergenic
GAGAAGGATAAGGACAAATC+CGG 0.507918 8_1:+74717455 Msa1214210:CDS
TTAGTTGTATCCGATATGAT+GGG 0.508907 8_1:-74718662 None:intergenic
GGTGGAGCAGACTATTGATC+AGG 0.509180 8_1:+74715857 Msa1214210:intron
CAAACAACCAAGGTGATTGA+AGG 0.517430 8_1:+74717096 Msa1214210:CDS
CAGCTCTAGCTTCATTTGGA+GGG 0.518822 8_1:-74715698 None:intergenic
TGATACCCAAACAGCTGCTA+AGG 0.519604 8_1:+74716073 Msa1214210:CDS
AAGGAGATGGCAGACCAGAT+AGG 0.519818 8_1:-74717225 None:intergenic
AAACCTCCTCTAACACCTGC+AGG 0.519952 8_1:-74718391 None:intergenic
CTTCTCTGAGGCTTCCAAGA+AGG 0.520510 8_1:+74716022 Msa1214210:CDS
GGTTGATGAGGCTATTGGCT+TGG 0.522150 8_1:-74717121 None:intergenic
GGTAAGGAATGTGAAGAGAG+TGG 0.527256 8_1:+74717800 Msa1214210:CDS
TTTCTGAGTAGATTGCCTGC+TGG 0.527852 8_1:-74718422 None:intergenic
CAACGTGTTGCTGAAGCTGT+AGG 0.541146 8_1:+74715915 Msa1214210:CDS
AGAAGTTCCAAACAAAATAC+GGG 0.543009 8_1:+74717773 Msa1214210:CDS
TCCAAACAAAATACGGGGAC+TGG 0.544882 8_1:+74717779 Msa1214210:CDS
GATTGATATTAGGTCAGAGA+AGG 0.545508 8_1:+74717439 Msa1214210:CDS
TTTGAAGCCTGGCTTTGATA+CGG 0.546314 8_1:+74715944 Msa1214210:CDS
AACACATGGATCGTTGGTGA+TGG 0.547381 8_1:+74718274 Msa1214210:CDS
CCATCCAGAATCATCCCTGC+AGG 0.548259 8_1:+74718376 Msa1214210:CDS
TAGTTGTATCCGATATGATG+GGG 0.548264 8_1:-74718661 None:intergenic
TGAGGTAAAGTGGAAGGAGA+TGG 0.548724 8_1:-74715591 None:intergenic
ACGAGTGGAAGAGTTTAAAA+GGG 0.549823 8_1:-74718583 None:intergenic
GGCAACGCCGTATCAAAGCC+AGG 0.554772 8_1:-74715951 None:intergenic
TGTTGTTGGAAGTGAAGCCA+TGG 0.556108 8_1:-74715556 None:intergenic
AGCTCTAGCTTCATTTGGAG+GGG 0.557709 8_1:-74715697 None:intergenic
TTTAAGAACACATGGATCGT+TGG 0.558923 8_1:+74718268 Msa1214210:CDS
TTGCCATTGTTAGTTGCTAG+TGG 0.561348 8_1:-74715521 None:intergenic
TGATGAAGTTATAGTATCCA+TGG 0.564729 8_1:-74717142 None:intergenic
TATTAGGTCAGAGAAGGATA+AGG 0.566526 8_1:+74717445 Msa1214210:CDS
AACGTGTTGCTGAAGCTGTA+GGG 0.570064 8_1:+74715916 Msa1214210:CDS
AACATATCAAGTGTTTGAGC+TGG 0.570805 8_1:-74717395 None:intergenic
AATGATATGCGTCTAAGTTG+AGG 0.574902 8_1:-74715636 None:intergenic
GACTATTGATCAGGTTCAGG+TGG 0.574947 8_1:+74715866 Msa1214210:CDS
ACCGCGAAAATTGAAGGAGA+TGG 0.577820 8_1:-74717238 None:intergenic
GGCAATGGAGGTTACAGCCA+TGG 0.578568 8_1:+74715539 Msa1214210:CDS
AGTGAAATGGTGGTTGATGT+TGG 0.580317 8_1:-74715660 None:intergenic
GAGAAGGTGGTGATTGTGTG+AGG 0.583865 8_1:-74715609 None:intergenic
TATAGTATCCATGGTTGATG+AGG 0.588646 8_1:-74717133 None:intergenic
AGTGATAATAAGGTGAGTAA+GGG 0.591303 8_1:-74719029 None:intergenic
AAAGAATCTCAATCAGCCCC+AGG 0.594925 8_1:-74718451 None:intergenic
GGCTTGGATTTAAGAACACA+TGG 0.597465 8_1:+74718260 Msa1214210:CDS
CTAGCAACTAACAATGGCAA+TGG 0.598628 8_1:+74715524 Msa1214210:exon
GCTGTTCCAGCAATCATGGT+AGG 0.599140 8_1:-74717168 None:intergenic
TGTGCAGCAGGCTGGACAAG+AGG 0.599418 8_1:+74715977 Msa1214210:CDS
AGTTGTATCCGATATGATGG+GGG 0.599944 8_1:-74718660 None:intergenic
TGCTTCTCCAGCCTTCTCTG+AGG 0.602112 8_1:+74716010 Msa1214210:CDS
CGAGTCCAAGATCACAATGT+TGG 0.602753 8_1:-74717877 None:intergenic
ATCCCTGCAGGTGTTAGAGG+AGG 0.609899 8_1:+74718388 Msa1214210:CDS
CTTCTTGGAAGCCTCAGAGA+AGG 0.611514 8_1:-74716021 None:intergenic
GCCAATAGCCTCATCAACCA+TGG 0.612547 8_1:+74717125 Msa1214210:CDS
GCAACTAACAATGGCAATGG+AGG 0.618578 8_1:+74715527 Msa1214210:exon
AGCCACTAAGCGTACACGAG+TGG 0.620651 8_1:-74718598 None:intergenic
TTGCAATCCCCTAAAACTAG+TGG 0.625194 8_1:+74718633 Msa1214210:three_prime_UTR
AGCTGCTGTTAACATCTCCA+AGG 0.626049 8_1:+74715716 Msa1214210:CDS
GAGATGGCAGACCAGATAGG+AGG 0.635679 8_1:-74717222 None:intergenic
AACCTCCTCTAACACCTGCA+GGG 0.638263 8_1:-74718390 None:intergenic
TGAGAGATCAATGTTGAGTG+AGG 0.640545 8_1:-74718476 None:intergenic
AAGAGCAAGTAGTGAAATGG+TGG 0.643538 8_1:-74715670 None:intergenic
TACTCAGAAACTTCTTCCTG+GGG 0.647418 8_1:+74718435 Msa1214210:CDS
CAACCACTAGCAACTAACAA+TGG 0.650476 8_1:+74715518 Msa1214210:exon
GTTGTATCCGATATGATGGG+GGG 0.660352 8_1:-74718659 None:intergenic
TTTAATGTCAAGTATACACA+TGG 0.665002 8_1:-74719052 None:intergenic
TAGGGATTAGACTGATAACA+AGG 0.665432 8_1:-74718741 None:intergenic
TATCTGAAGAAAATCAACAA+AGG 0.667456 8_1:+74717852 Msa1214210:CDS
ATTGTGTGAGGTAAAGTGGA+AGG 0.668375 8_1:-74715597 None:intergenic
ACCAGATAGGAGGAAACAAG+AGG 0.669558 8_1:-74717212 None:intergenic
ATACGTATAATATAGGTACT+CGG 0.671241 8_1:+74718204 Msa1214210:intron
TTAGCACTAGATGGAAGGCG+AGG 0.681162 8_1:-74717482 None:intergenic
TTGATGATAGAAGAGTGAAG+TGG 0.684018 8_1:-74715489 None:intergenic
TGCTGCACAACAAACAACCA+AGG 0.684435 8_1:+74717086 Msa1214210:CDS
CCTGCAGGGATGATTCTGGA+TGG 0.685866 8_1:-74718376 None:intergenic
TAGTTGCTAGAACACTAACA+GGG 0.734014 8_1:+74718239 Msa1214210:CDS
GAAGTTCCAAACAAAATACG+GGG 0.754138 8_1:+74717774 Msa1214210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTAAAT+TGG - chr8_1:74715199-74715218 None:intergenic 0.0%
!!! ATGCATTTTTTTTATTATAT+AGG + chr8_1:74715836-74715855 Msa1214210:intron 10.0%
!! TAATGTCTTTAAATTAAAAA+AGG - chr8_1:74718845-74718864 None:intergenic 10.0%
!!! CATTTTTTTTATTATATAGG+TGG + chr8_1:74715839-74715858 Msa1214210:intron 15.0%
!! AGTTAAATTTATTATCCAAA+CGG - chr8_1:74716131-74716150 None:intergenic 15.0%
!!! TACTTAACTTATTAACTTTT+TGG + chr8_1:74718096-74718115 Msa1214210:intron 15.0%
!!! ACTTAACTTATTAACTTTTT+GGG + chr8_1:74718097-74718116 Msa1214210:intron 15.0%
!!! ATCAAATTAATATATTTTCG+AGG - chr8_1:74718540-74718559 None:intergenic 15.0%
!! GTAGGAGAATAATATAATTT+GGG - chr8_1:74715332-74715351 None:intergenic 20.0%
!! TGTAGGAGAATAATATAATT+TGG - chr8_1:74715333-74715352 None:intergenic 20.0%
!!! TTTATGTCTTTGGTTTTATA+TGG + chr8_1:74716592-74716611 Msa1214210:intron 20.0%
!! TACACATCTTAAATCAATTA+TGG - chr8_1:74716913-74716932 None:intergenic 20.0%
!! ATCAGATTGATAAATTAACT+TGG - chr8_1:74717033-74717052 None:intergenic 20.0%
!! GTTAATTTATCAATCTGATT+CGG + chr8_1:74717034-74717053 Msa1214210:intron 20.0%
!!! AAACAACATTTTTCTTTCTT+TGG + chr8_1:74717337-74717356 Msa1214210:intron 20.0%
!!! ACTACATTTTGATTGATATT+AGG + chr8_1:74717429-74717448 Msa1214210:CDS 20.0%
!! AAGTTTATTACAATGAGTAT+AGG - chr8_1:74717678-74717697 None:intergenic 20.0%
!! AATAGTAAGATAGATTTGAA+AGG - chr8_1:74717910-74717929 None:intergenic 20.0%
!! TTAACACTAAAAAGAAAGTT+AGG - chr8_1:74718163-74718182 None:intergenic 20.0%
! TTTGGAAGAAAAACTTACTT+GGG - chr8_1:74715763-74715782 None:intergenic 25.0%
! CTTGTTAAAGTTAGAAACTT+TGG - chr8_1:74715781-74715800 None:intergenic 25.0%
! AAAATGCATTTCCAGTTAAA+GGG - chr8_1:74715825-74715844 None:intergenic 25.0%
! AAAAATGCATTTCCAGTTAA+AGG - chr8_1:74715826-74715845 None:intergenic 25.0%
! AACTTATATTCATAGCTCTT+CGG - chr8_1:74716271-74716290 None:intergenic 25.0%
!! TTCTTTTTATAAGCTCTTTC+AGG + chr8_1:74716318-74716337 Msa1214210:intron 25.0%
!!! TATTTGAGACCAATTTTATC+CGG + chr8_1:74716409-74716428 Msa1214210:intron 25.0%
! ATTATCAATCCGGATAAAAT+TGG - chr8_1:74716421-74716440 None:intergenic 25.0%
!! GCAATGTTAGTTAACTTTTA+GGG + chr8_1:74716475-74716494 Msa1214210:intron 25.0%
!! AATGTGCCAAATAAACTTTT+CGG + chr8_1:74716545-74716564 Msa1214210:intron 25.0%
! CTTGAGAATATTCAAATATG+TGG - chr8_1:74716946-74716965 None:intergenic 25.0%
!! GAAAAATGTTGTTTGACATA+AGG - chr8_1:74717331-74717350 None:intergenic 25.0%
! AATTTGTATTTAGATTCTCG+TGG + chr8_1:74717561-74717580 Msa1214210:intron 25.0%
! ATAATAACTGATCATAACGA+AGG - chr8_1:74717642-74717661 None:intergenic 25.0%
! AAGAAGTTCCAAACAAAATA+CGG + chr8_1:74717772-74717791 Msa1214210:CDS 25.0%
! TATCTGAAGAAAATCAACAA+AGG + chr8_1:74717852-74717871 Msa1214210:CDS 25.0%
!! ATCATTTTCAGTTCACTATA+TGG + chr8_1:74717935-74717954 Msa1214210:intron 25.0%
! TTTCTCAAATTATCAAGTGT+CGG - chr8_1:74718000-74718019 None:intergenic 25.0%
!! GTTAATCAACTTCTGATTTT+TGG + chr8_1:74718178-74718197 Msa1214210:intron 25.0%
! TTGGACAATACGTATAATAT+AGG + chr8_1:74718197-74718216 Msa1214210:intron 25.0%
! ATACGTATAATATAGGTACT+CGG + chr8_1:74718204-74718223 Msa1214210:intron 25.0%
!!! TCAAGCTCAATGTTTTTTAA+TGG + chr8_1:74718691-74718710 Msa1214210:three_prime_UTR 25.0%
! TTTAATGGTGGTTATAATGA+AGG + chr8_1:74718706-74718725 Msa1214210:three_prime_UTR 25.0%
! TTTAATGTCAAGTATACACA+TGG - chr8_1:74719055-74719074 None:intergenic 25.0%
AGTTCGTGTGACATAAATTA+TGG + chr8_1:74715227-74715246 Msa1214210:intron 30.0%
! ATAATTTGGGACATTCTCAT+TGG - chr8_1:74715319-74715338 None:intergenic 30.0%
!!! ACGTGGATTTTTTGTTTTGT+AGG - chr8_1:74715350-74715369 None:intergenic 30.0%
TACAAAACAAAAAATCCACG+TGG + chr8_1:74715349-74715368 Msa1214210:intron 30.0%
ATGTAGCATCTTTGTATTTG+AGG - chr8_1:74715394-74715413 None:intergenic 30.0%
CAAATACAAAGATGCTACAT+AGG + chr8_1:74715394-74715413 Msa1214210:intron 30.0%
! CTTTGGAAGAAAAACTTACT+TGG - chr8_1:74715764-74715783 None:intergenic 30.0%
TTGCTTAATTCATTCAGTCT+TGG + chr8_1:74716097-74716116 Msa1214210:intron 30.0%
TGCTTAATTCATTCAGTCTT+GGG + chr8_1:74716098-74716117 Msa1214210:intron 30.0%
ACTTATATTCATAGCTCTTC+GGG - chr8_1:74716270-74716289 None:intergenic 30.0%
AGCAAATGTCATTATCAATC+CGG - chr8_1:74716431-74716450 None:intergenic 30.0%
!! ATTGATAATGACATTTGCTC+TGG + chr8_1:74716432-74716451 Msa1214210:intron 30.0%
! GGCAATGTTAGTTAACTTTT+AGG + chr8_1:74716474-74716493 Msa1214210:intron 30.0%
TTGGATCCGAAAAGTTTATT+TGG - chr8_1:74716554-74716573 None:intergenic 30.0%
! AAGAGTGTGTTTATGGAATT+TGG - chr8_1:74716573-74716592 None:intergenic 30.0%
! GACATAAAAGAGTGTGTTTA+TGG - chr8_1:74716580-74716599 None:intergenic 30.0%
! AACACACTCTTTTATGTCTT+TGG + chr8_1:74716582-74716601 Msa1214210:intron 30.0%
TGGATAGAAAGCAATTATGA+GGG + chr8_1:74716622-74716641 Msa1214210:intron 30.0%
TTTATACTGTCACATGCATT+TGG + chr8_1:74716725-74716744 Msa1214210:intron 30.0%
! TACAAGACATAGAATTTGCT+TGG + chr8_1:74716870-74716889 Msa1214210:intron 30.0%
CAAGTTAGAATCAATTCTGA+AGG - chr8_1:74716983-74717002 None:intergenic 30.0%
! ATCATCTTTGATTTAGACAG+TGG + chr8_1:74717059-74717078 Msa1214210:intron 30.0%
TGATGAAGTTATAGTATCCA+TGG - chr8_1:74717145-74717164 None:intergenic 30.0%
! GCAAATTTTGTGCTTCTATA+TGG + chr8_1:74717295-74717314 Msa1214210:intron 30.0%
!!! ATCTTGTTTTTAGCACTAGA+TGG - chr8_1:74717494-74717513 None:intergenic 30.0%
ATCTAGTGCTAAAAACAAGA+TGG + chr8_1:74717493-74717512 Msa1214210:CDS 30.0%
GGCAACAAATCTTAACTTAA+AGG - chr8_1:74717621-74717640 None:intergenic 30.0%
AGAAGTTCCAAACAAAATAC+GGG + chr8_1:74717773-74717792 Msa1214210:CDS 30.0%
! ATTTTCAGTTCACTATATGG+CGG + chr8_1:74717938-74717957 Msa1214210:intron 30.0%
! GTATAAATTTTCGTTTGCAG+AGG + chr8_1:74718345-74718364 Msa1214210:CDS 30.0%
TTCGAGGATTTGATTAATCA+AGG - chr8_1:74718524-74718543 None:intergenic 30.0%
TTAGTTGTATCCGATATGAT+GGG - chr8_1:74718665-74718684 None:intergenic 30.0%
TTTAGTTGTATCCGATATGA+TGG - chr8_1:74718666-74718685 None:intergenic 30.0%
!!! AGCTCAATGTTTTTTAATGG+TGG + chr8_1:74718694-74718713 Msa1214210:three_prime_UTR 30.0%
AGTGATAATAAGGTGAGTAA+GGG - chr8_1:74719032-74719051 None:intergenic 30.0%
ATACACATGGAGTGATAATA+AGG - chr8_1:74719042-74719061 None:intergenic 30.0%
AACAAAAAATCCACGTGGAA+TGG + chr8_1:74715354-74715373 Msa1214210:intron 35.0%
TTGTAGTGATTAGAGATGTG+TGG - chr8_1:74715455-74715474 None:intergenic 35.0%
! TTGATGATAGAAGAGTGAAG+TGG - chr8_1:74715492-74715511 None:intergenic 35.0%
!!! TCTAAGTTGAGGTTTTGAGA+AGG - chr8_1:74715628-74715647 None:intergenic 35.0%
AATGATATGCGTCTAAGTTG+AGG - chr8_1:74715639-74715658 None:intergenic 35.0%
GAAAAGAGCAAGTAGTGAAA+TGG - chr8_1:74715676-74715695 None:intergenic 35.0%
AGAAGAAACAATTTGGTCCT+TGG - chr8_1:74715736-74715755 None:intergenic 35.0%
AATTCATTCAGTCTTGGGAT+TGG + chr8_1:74716103-74716122 Msa1214210:intron 35.0%
ATTCATTCAGTCTTGGGATT+GGG + chr8_1:74716104-74716123 Msa1214210:intron 35.0%
CAGCATAAACATTTGTGAGA+TGG - chr8_1:74716344-74716363 None:intergenic 35.0%
CATCTCACAAATGTTTATGC+TGG + chr8_1:74716342-74716361 Msa1214210:intron 35.0%
TGGCACATTATAGCTCAAAT+AGG - chr8_1:74716534-74716553 None:intergenic 35.0%
CATAATTGCTTTCTATCCAC+AGG - chr8_1:74716621-74716640 None:intergenic 35.0%
GTGGATAGAAAGCAATTATG+AGG + chr8_1:74716621-74716640 Msa1214210:intron 35.0%
! GGAAAGTGATGGTGTAAAAA+TGG - chr8_1:74716666-74716685 None:intergenic 35.0%
AGTAGTACAATGGAAAGTGA+TGG - chr8_1:74716677-74716696 None:intergenic 35.0%
AACATTTATCCACCCACTAA+GGG - chr8_1:74716707-74716726 None:intergenic 35.0%
AAACATTTATCCACCCACTA+AGG - chr8_1:74716708-74716727 None:intergenic 35.0%
ACATGCATTTGGAGAGATTT+GGG + chr8_1:74716736-74716755 Msa1214210:intron 35.0%
TGATGTACTTTCATGTGAAC+TGG + chr8_1:74716760-74716779 Msa1214210:intron 35.0%
! GTGAACTGGAAAAGTTCTTT+TGG + chr8_1:74716774-74716793 Msa1214210:intron 35.0%
!! AATTTGCTTGGTTCCACTTT+TGG + chr8_1:74716882-74716901 Msa1214210:intron 35.0%
! TATAGTATCCATGGTTGATG+AGG - chr8_1:74717136-74717155 None:intergenic 35.0%
TTTGTAACCGCGAAAATTGA+AGG - chr8_1:74717247-74717266 None:intergenic 35.0%
! TTCAATTTTCGCGGTTACAA+AGG + chr8_1:74717246-74717265 Msa1214210:CDS 35.0%
TTTGCATCAAAGCATGTCAA+GGG - chr8_1:74717280-74717299 None:intergenic 35.0%
ATTTGCATCAAAGCATGTCA+AGG - chr8_1:74717281-74717300 None:intergenic 35.0%
AACATATCAAGTGTTTGAGC+TGG - chr8_1:74717398-74717417 None:intergenic 35.0%
GATTGATATTAGGTCAGAGA+AGG + chr8_1:74717439-74717458 Msa1214210:CDS 35.0%
TATTAGGTCAGAGAAGGATA+AGG + chr8_1:74717445-74717464 Msa1214210:CDS 35.0%
!!! TGTTTTTAGCACTAGATGGA+AGG - chr8_1:74717490-74717509 None:intergenic 35.0%
AGATAGAGGTAAGACACTTA+CGG - chr8_1:74717527-74717546 None:intergenic 35.0%
GTACTATGAGTACTAGATAG+AGG - chr8_1:74717541-74717560 None:intergenic 35.0%
AATCAAAGCCATAAGAAGTG+AGG - chr8_1:74717738-74717757 None:intergenic 35.0%
!! GCTTTGATTTGAACTCAGAT+TGG + chr8_1:74717749-74717768 Msa1214210:intron 35.0%
GAAGTTCCAAACAAAATACG+GGG + chr8_1:74717774-74717793 Msa1214210:CDS 35.0%
ATAGTTGCTAGAACACTAAC+AGG + chr8_1:74718238-74718257 Msa1214210:CDS 35.0%
TAGTTGCTAGAACACTAACA+GGG + chr8_1:74718239-74718258 Msa1214210:CDS 35.0%
TTTAAGAACACATGGATCGT+TGG + chr8_1:74718268-74718287 Msa1214210:CDS 35.0%
ACGAGTGGAAGAGTTTAAAA+GGG - chr8_1:74718586-74718605 None:intergenic 35.0%
TAGTTGTATCCGATATGATG+GGG - chr8_1:74718664-74718683 None:intergenic 35.0%
TAGGGATTAGACTGATAACA+AGG - chr8_1:74718744-74718763 None:intergenic 35.0%
GAGTGATAATAAGGTGAGTA+AGG - chr8_1:74719033-74719052 None:intergenic 35.0%
! TTAGTTGCTAGTGGTTGGTT+TGG - chr8_1:74715515-74715534 None:intergenic 40.0%
CATTGTTAGTTGCTAGTGGT+TGG - chr8_1:74715520-74715539 None:intergenic 40.0%
CAACCACTAGCAACTAACAA+TGG + chr8_1:74715518-74715537 Msa1214210:exon 40.0%
TTGCCATTGTTAGTTGCTAG+TGG - chr8_1:74715524-74715543 None:intergenic 40.0%
CTAGCAACTAACAATGGCAA+TGG + chr8_1:74715524-74715543 Msa1214210:exon 40.0%
!!! GGAAGAGAAGGTTTTGTTGT+TGG - chr8_1:74715573-74715592 None:intergenic 40.0%
ATTGTGTGAGGTAAAGTGGA+AGG - chr8_1:74715600-74715619 None:intergenic 40.0%
!!! AAGTTGAGGTTTTGAGAAGG+TGG - chr8_1:74715625-74715644 None:intergenic 40.0%
! AGTGAAATGGTGGTTGATGT+TGG - chr8_1:74715663-74715682 None:intergenic 40.0%
AAGAGCAAGTAGTGAAATGG+TGG - chr8_1:74715673-74715692 None:intergenic 40.0%
GGGTGAGAGAAGAAACAATT+TGG - chr8_1:74715743-74715762 None:intergenic 40.0%
AGGGCATGCATGTAAATTGA+AGG - chr8_1:74715806-74715825 None:intergenic 40.0%
TTACATGCATGCCCTTTAAC+TGG + chr8_1:74715811-74715830 Msa1214210:intron 40.0%
!! TTTGAAGCCTGGCTTTGATA+CGG + chr8_1:74715944-74715963 Msa1214210:CDS 40.0%
!! CAAGAAGCACTTCAAAGTTC+TGG + chr8_1:74716047-74716066 Msa1214210:CDS 40.0%
!!! TGGTTTTATATGGTCACCTG+TGG + chr8_1:74716602-74716621 Msa1214210:intron 40.0%
AGAAAGCAATTATGAGGGTG+AGG + chr8_1:74716627-74716646 Msa1214210:intron 40.0%
GAAAGCAATTATGAGGGTGA+GGG + chr8_1:74716628-74716647 Msa1214210:intron 40.0%
CACATGCATTTGGAGAGATT+TGG + chr8_1:74716735-74716754 Msa1214210:intron 40.0%
AATTATGGCTCCTCCAAAAG+TGG - chr8_1:74716898-74716917 None:intergenic 40.0%
CAAACAACCAAGGTGATTGA+AGG + chr8_1:74717096-74717115 Msa1214210:CDS 40.0%
! GATGCATGTGTTTTCTTTGC+AGG + chr8_1:74717362-74717381 Msa1214210:intron 40.0%
GAGAAGGATAAGGACAAATC+CGG + chr8_1:74717455-74717474 Msa1214210:CDS 40.0%
!! CTCAAATTATCAAGTGTCGG+TGG - chr8_1:74717997-74718016 None:intergenic 40.0%
TTGAATGTAACCTCACGTGT+CGG + chr8_1:74718029-74718048 Msa1214210:intron 40.0%
GGCTTGGATTTAAGAACACA+TGG + chr8_1:74718260-74718279 Msa1214210:CDS 40.0%
!!! ATCGTTGGTGATGGATTTTC+TGG + chr8_1:74718283-74718302 Msa1214210:CDS 40.0%
GGATGGTTACAGAGTAGATT+AGG + chr8_1:74718313-74718332 Msa1214210:CDS 40.0%
TCTACTCAGAAACTTCTTCC+TGG + chr8_1:74718433-74718452 Msa1214210:CDS 40.0%
CTACTCAGAAACTTCTTCCT+GGG + chr8_1:74718434-74718453 Msa1214210:CDS 40.0%
TACTCAGAAACTTCTTCCTG+GGG + chr8_1:74718435-74718454 Msa1214210:CDS 40.0%
TGAGAGATCAATGTTGAGTG+AGG - chr8_1:74718479-74718498 None:intergenic 40.0%
CACGAGTGGAAGAGTTTAAA+AGG - chr8_1:74718587-74718606 None:intergenic 40.0%
TTGCAATCCCCTAAAACTAG+TGG + chr8_1:74718633-74718652 Msa1214210:three_prime_UTR 40.0%
AGTTGTATCCGATATGATGG+GGG - chr8_1:74718663-74718682 None:intergenic 40.0%
!! CTTTTGGAGGGATCAACATA+GGG - chr8_1:74718762-74718781 None:intergenic 40.0%
!! TCTTTTGGAGGGATCAACAT+AGG - chr8_1:74718763-74718782 None:intergenic 40.0%
ATCCCTCCAAAAGATCCTAA+GGG + chr8_1:74718769-74718788 Msa1214210:intron 40.0%
! AACACACCCTTAGGATCTTT+TGG - chr8_1:74718778-74718797 None:intergenic 40.0%
! AAAGATCCTAAGGGTGTGTT+TGG + chr8_1:74718778-74718797 Msa1214210:intron 40.0%
! AAGATCCTAAGGGTGTGTTT+GGG + chr8_1:74718779-74718798 Msa1214210:intron 40.0%
TTTGGGAAGAGGGTTTAGAA+GGG + chr8_1:74718796-74718815 Msa1214210:intron 40.0%
AACATCATCACCATTCCACG+TGG - chr8_1:74715367-74715386 None:intergenic 45.0%
GCAACTAACAATGGCAATGG+AGG + chr8_1:74715527-74715546 Msa1214210:exon 45.0%
TGTTGTTGGAAGTGAAGCCA+TGG - chr8_1:74715559-74715578 None:intergenic 45.0%
TGAGGTAAAGTGGAAGGAGA+TGG - chr8_1:74715594-74715613 None:intergenic 45.0%
GGTGATTGTGTGAGGTAAAG+TGG - chr8_1:74715604-74715623 None:intergenic 45.0%
! AGCTCTAGCTTCATTTGGAG+GGG - chr8_1:74715700-74715719 None:intergenic 45.0%
! CAGCTCTAGCTTCATTTGGA+GGG - chr8_1:74715701-74715720 None:intergenic 45.0%
! ACAGCAGCTCTAGCTTCATT+TGG - chr8_1:74715705-74715724 None:intergenic 45.0%
AGCTGCTGTTAACATCTCCA+AGG + chr8_1:74715716-74715735 Msa1214210:CDS 45.0%
GCAGACTATTGATCAGGTTC+AGG + chr8_1:74715863-74715882 Msa1214210:CDS 45.0%
GACTATTGATCAGGTTCAGG+TGG + chr8_1:74715866-74715885 Msa1214210:CDS 45.0%
ATTGATCAGGTTCAGGTGGT+TGG + chr8_1:74715870-74715889 Msa1214210:CDS 45.0%
!!! GGTGGTTGGTTCTGGTTTTT+TGG + chr8_1:74715884-74715903 Msa1214210:CDS 45.0%
! AACGTGTTGCTGAAGCTGTA+GGG + chr8_1:74715916-74715935 Msa1214210:CDS 45.0%
AAGTGCTTCTTGAGCCTTCT+TGG - chr8_1:74716039-74716058 None:intergenic 45.0%
TGATACCCAAACAGCTGCTA+AGG + chr8_1:74716073-74716092 Msa1214210:CDS 45.0%
GCAAACCTTAGCAGCTGTTT+GGG - chr8_1:74716081-74716100 None:intergenic 45.0%
AGCAAACCTTAGCAGCTGTT+TGG - chr8_1:74716082-74716101 None:intergenic 45.0%
ATTGCCATGCCACAGATAGA+TGG - chr8_1:74716460-74716479 None:intergenic 45.0%
GGGTGCAGTTAGTAGTACAA+TGG - chr8_1:74716687-74716706 None:intergenic 45.0%
ACTACTAACTGCACCCTTAG+TGG + chr8_1:74716691-74716710 Msa1214210:intron 45.0%
CTACTAACTGCACCCTTAGT+GGG + chr8_1:74716692-74716711 Msa1214210:intron 45.0%
!! TTGCTTGGTTCCACTTTTGG+AGG + chr8_1:74716885-74716904 Msa1214210:intron 45.0%
TGCTGCACAACAAACAACCA+AGG + chr8_1:74717086-74717105 Msa1214210:CDS 45.0%
!! TCCATGGTTGATGAGGCTAT+TGG - chr8_1:74717129-74717148 None:intergenic 45.0%
TCAGATCCTACCATGATTGC+TGG + chr8_1:74717162-74717181 Msa1214210:CDS 45.0%
! ACCTCTTGTTTCCTCCTATC+TGG + chr8_1:74717211-74717230 Msa1214210:CDS 45.0%
ACCAGATAGGAGGAAACAAG+AGG - chr8_1:74717215-74717234 None:intergenic 45.0%
! GCCATCTCCTTCAATTTTCG+CGG + chr8_1:74717237-74717256 Msa1214210:CDS 45.0%
ACCGCGAAAATTGAAGGAGA+TGG - chr8_1:74717241-74717260 None:intergenic 45.0%
GAGGTAAGACACTTACGGAA+TGG - chr8_1:74717522-74717541 None:intergenic 45.0%
AGCATGAGCCTCACTTCTTA+TGG + chr8_1:74717727-74717746 Msa1214210:intron 45.0%
TCCAAACAAAATACGGGGAC+TGG + chr8_1:74717779-74717798 Msa1214210:CDS 45.0%
! ACCAGTCCCCGTATTTTGTT+TGG - chr8_1:74717783-74717802 None:intergenic 45.0%
! ACAAAATACGGGGACTGGTA+AGG + chr8_1:74717784-74717803 Msa1214210:CDS 45.0%
GGTAAGGAATGTGAAGAGAG+TGG + chr8_1:74717800-74717819 Msa1214210:CDS 45.0%
AGGCACCAACATTGTGATCT+TGG + chr8_1:74717872-74717891 Msa1214210:CDS 45.0%
CGAGTCCAAGATCACAATGT+TGG - chr8_1:74717880-74717899 None:intergenic 45.0%
CATTGTGATCTTGGACTCGT+AGG + chr8_1:74717881-74717900 Msa1214210:intron 45.0%
TTATCTACGAGACGCAGACT+CGG + chr8_1:74717965-74717984 Msa1214210:intron 45.0%
! AACACATGGATCGTTGGTGA+TGG + chr8_1:74718274-74718293 Msa1214210:CDS 45.0%
!!! GTTGGTGATGGATTTTCTGG+AGG + chr8_1:74718286-74718305 Msa1214210:CDS 45.0%
!! GATGGATTTTCTGGAGGCAA+AGG + chr8_1:74718292-74718311 Msa1214210:CDS 45.0%
!! GATTTTCTGGAGGCAAAGGA+TGG + chr8_1:74718296-74718315 Msa1214210:CDS 45.0%
TTTCTGAGTAGATTGCCTGC+TGG - chr8_1:74718425-74718444 None:intergenic 45.0%
AAAGAATCTCAATCAGCCCC+AGG - chr8_1:74718454-74718473 None:intergenic 45.0%
! GTTGTATCCGATATGATGGG+GGG - chr8_1:74718662-74718681 None:intergenic 45.0%
GATCCCTCCAAAAGATCCTA+AGG + chr8_1:74718768-74718787 Msa1214210:intron 45.0%
! CACCCTTAGGATCTTTTGGA+GGG - chr8_1:74718774-74718793 None:intergenic 45.0%
! ACACCCTTAGGATCTTTTGG+AGG - chr8_1:74718775-74718794 None:intergenic 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG + chr8_1:74718786-74718805 Msa1214210:intron 45.0%
GTTTGGGAAGAGGGTTTAGA+AGG + chr8_1:74718795-74718814 Msa1214210:intron 45.0%
TTGGGAAGAGGGTTTAGAAG+GGG + chr8_1:74718797-74718816 Msa1214210:intron 45.0%
AAGAGGGTTTAGAAGGGGAA+GGG + chr8_1:74718802-74718821 Msa1214210:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr8_1:74719005-74719024 None:intergenic 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr8_1:74718792-74718811 None:intergenic 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG - chr8_1:74718786-74718805 None:intergenic 45.0%
! AGGTGAGTAAGGGTGTGTTT+GGG - chr8_1:74719022-74719041 None:intergenic 45.0%
! AAGGTGAGTAAGGGTGTGTT+TGG - chr8_1:74719023-74719042 None:intergenic 45.0%
GTGGAAGGAGATGGAAGAGA+AGG - chr8_1:74715585-74715604 None:intergenic 50.0%
GAGAAGGTGGTGATTGTGTG+AGG - chr8_1:74715612-74715631 None:intergenic 50.0%
! GCAGCTCTAGCTTCATTTGG+AGG - chr8_1:74715702-74715721 None:intergenic 50.0%
GGTGGAGCAGACTATTGATC+AGG + chr8_1:74715857-74715876 Msa1214210:intron 50.0%
! CAACGTGTTGCTGAAGCTGT+AGG + chr8_1:74715915-74715934 Msa1214210:CDS 50.0%
CTTCTTGGAAGCCTCAGAGA+AGG - chr8_1:74716024-74716043 None:intergenic 50.0%
!! CTTCTCTGAGGCTTCCAAGA+AGG + chr8_1:74716022-74716041 Msa1214210:CDS 50.0%
GCTCTGGTACCATCTATCTG+TGG + chr8_1:74716448-74716467 Msa1214210:intron 50.0%
GGTACCATCTATCTGTGGCA+TGG + chr8_1:74716453-74716472 Msa1214210:intron 50.0%
GCAATTATGAGGGTGAGGGT+TGG + chr8_1:74716632-74716651 Msa1214210:intron 50.0%
CTTGGCACCTTCAATCACCT+TGG - chr8_1:74717106-74717125 None:intergenic 50.0%
!! GGTTGATGAGGCTATTGGCT+TGG - chr8_1:74717124-74717143 None:intergenic 50.0%
GCCAATAGCCTCATCAACCA+TGG + chr8_1:74717125-74717144 Msa1214210:CDS 50.0%
GCTGTTCCAGCAATCATGGT+AGG - chr8_1:74717171-74717190 None:intergenic 50.0%
ACCATGATTGCTGGAACAGC+TGG + chr8_1:74717171-74717190 Msa1214210:CDS 50.0%
TCCAGCTGTTCCAGCAATCA+TGG - chr8_1:74717175-74717194 None:intergenic 50.0%
AAGGAGATGGCAGACCAGAT+AGG - chr8_1:74717228-74717247 None:intergenic 50.0%
AGATGGAAGGCGAGGAATAC+CGG - chr8_1:74717477-74717496 None:intergenic 50.0%
TTAGCACTAGATGGAAGGCG+AGG - chr8_1:74717485-74717504 None:intergenic 50.0%
TCATGCTTACTAGTGCCCCT+GGG + chr8_1:74718120-74718139 Msa1214210:intron 50.0%
AAATGCGAACAAGTGCCCCA+GGG - chr8_1:74718139-74718158 None:intergenic 50.0%
AAAATGCGAACAAGTGCCCC+AGG - chr8_1:74718140-74718159 None:intergenic 50.0%
GCTAGAACACTAACAGGGCT+TGG + chr8_1:74718244-74718263 Msa1214210:CDS 50.0%
AACACCTGCAGGGATGATTC+TGG - chr8_1:74718383-74718402 None:intergenic 50.0%
ATCATCCCTGCAGGTGTTAG+AGG + chr8_1:74718385-74718404 Msa1214210:CDS 50.0%
AACCTCCTCTAACACCTGCA+GGG - chr8_1:74718393-74718412 None:intergenic 50.0%
AAACCTCCTCTAACACCTGC+AGG - chr8_1:74718394-74718413 None:intergenic 50.0%
! GCAGGTGTTAGAGGAGGTTT+TGG + chr8_1:74718394-74718413 Msa1214210:CDS 50.0%
!!! GAGGTTTTGGAACAACCAGC+AGG + chr8_1:74718407-74718426 Msa1214210:CDS 50.0%
TTCCACTCGTGTACGCTTAG+TGG + chr8_1:74718596-74718615 Msa1214210:three_prime_UTR 50.0%
CTCTTCCCAAACACACCCTT+AGG - chr8_1:74719014-74719033 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGGAAG+AGG + chr8_1:74718785-74718804 Msa1214210:intron 50.0%
GAAGAGGGTTTAGAAGGGGA+AGG + chr8_1:74718801-74718820 Msa1214210:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG - chr8_1:74718999-74719018 None:intergenic 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr8_1:74719004-74719023 None:intergenic 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr8_1:74719006-74719025 None:intergenic 50.0%
! GTAAGGGTGTGTTTGGGAAG+AGG - chr8_1:74719016-74719035 None:intergenic 50.0%
GGCAATGGAGGTTACAGCCA+TGG + chr8_1:74715539-74715558 Msa1214210:CDS 55.0%
! CAGGTTCAGGTGGTTGGTTC+TGG + chr8_1:74715876-74715895 Msa1214210:CDS 55.0%
!! GTAGGGAGTGCTTTGAAGCC+TGG + chr8_1:74715933-74715952 Msa1214210:CDS 55.0%
TTGCCAATTGTGCAGCAGGC+TGG + chr8_1:74715969-74715988 Msa1214210:CDS 55.0%
TGTCCAGCCTGCTGCACAAT+TGG - chr8_1:74715975-74715994 None:intergenic 55.0%
TGCTTCTCCAGCCTTCTCTG+AGG + chr8_1:74716010-74716029 Msa1214210:CDS 55.0%
TTGGAAGCCTCAGAGAAGGC+TGG - chr8_1:74716020-74716039 None:intergenic 55.0%
GTCTTGGGATTGGGACCGTT+TGG + chr8_1:74716113-74716132 Msa1214210:intron 55.0%
!! TGAGGGTGAGGGTTGGTTTG+AGG + chr8_1:74716639-74716658 Msa1214210:intron 55.0%
CTAACTGCACCCTTAGTGGG+TGG + chr8_1:74716695-74716714 Msa1214210:intron 55.0%
GAGATGGCAGACCAGATAGG+AGG - chr8_1:74717225-74717244 None:intergenic 55.0%
TGACATGACACCGACACGTG+AGG - chr8_1:74718042-74718061 None:intergenic 55.0%
GTCATGCTTACTAGTGCCCC+TGG + chr8_1:74718119-74718138 Msa1214210:intron 55.0%
CATGCTTACTAGTGCCCCTG+GGG + chr8_1:74718121-74718140 Msa1214210:intron 55.0%
AATGCGAACAAGTGCCCCAG+GGG - chr8_1:74718138-74718157 None:intergenic 55.0%
CCTGCAGGGATGATTCTGGA+TGG - chr8_1:74718379-74718398 None:intergenic 55.0%
CCATCCAGAATCATCCCTGC+AGG + chr8_1:74718376-74718395 Msa1214210:CDS 55.0%
ATCCCTGCAGGTGTTAGAGG+AGG + chr8_1:74718388-74718407 Msa1214210:CDS 55.0%
AGCCACTAAGCGTACACGAG+TGG - chr8_1:74718601-74718620 None:intergenic 55.0%
! GTATCCGATATGATGGGGGG+CGG - chr8_1:74718659-74718678 None:intergenic 55.0%
AGGGTTTAGAAGGGGAAGGG+AGG + chr8_1:74718805-74718824 Msa1214210:intron 55.0%
GGGTTTAGAAGGGGAAGGGA+GGG + chr8_1:74718806-74718825 Msa1214210:intron 55.0%
GGTTTAGAAGGGGAAGGGAG+GGG + chr8_1:74718807-74718826 Msa1214210:intron 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG - chr8_1:74719000-74719019 None:intergenic 55.0%
GGCAACGCCGTATCAAAGCC+AGG - chr8_1:74715954-74715973 None:intergenic 60.0%
GGCGTTGCCAATTGTGCAGC+AGG + chr8_1:74715965-74715984 Msa1214210:CDS 60.0%
TGTGCAGCAGGCTGGACAAG+AGG + chr8_1:74715977-74715996 Msa1214210:CDS 60.0%
!!! GGGGCGGCCACTAGTTTTAG+GGG - chr8_1:74718643-74718662 None:intergenic 60.0%
!!! GGGGGCGGCCACTAGTTTTA+GGG - chr8_1:74718644-74718663 None:intergenic 60.0%
TTAGAAGGGGAAGGGAGGGG+AGG + chr8_1:74718810-74718829 Msa1214210:intron 60.0%
TAGAAGGGGAAGGGAGGGGA+GGG + chr8_1:74718811-74718830 Msa1214210:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr8_1:74718994-74719013 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr8_1:74718995-74719014 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr8_1:74718996-74719015 None:intergenic 60.0%
!!! GGGGGGCGGCCACTAGTTTT+AGG - chr8_1:74718645-74718664 None:intergenic 65.0%
GTGGCCGCCCCCCATCATAT+CGG + chr8_1:74718652-74718671 Msa1214210:three_prime_UTR 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr8_1:74718990-74719009 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr8_1:74718991-74719010 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 74715183 74719085 74715183 ID=Msa1214210;Name=Msa1214210
chr8_1 mRNA 74715183 74719085 74715183 ID=Msa1214210-mRNA-1;Parent=Msa1214210;Name=Msa1214210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=98|1|1|1|0.71|0.5|8|374|392
chr8_1 exon 74715183 74715218 74715183 ID=Msa1214210-mRNA-1:exon:25622;Parent=Msa1214210-mRNA-1
chr8_1 exon 74715475 74715764 74715475 ID=Msa1214210-mRNA-1:exon:25623;Parent=Msa1214210-mRNA-1
chr8_1 exon 74715858 74716094 74715858 ID=Msa1214210-mRNA-1:exon:25624;Parent=Msa1214210-mRNA-1
chr8_1 exon 74717075 74717267 74717075 ID=Msa1214210-mRNA-1:exon:25625;Parent=Msa1214210-mRNA-1
chr8_1 exon 74717384 74717525 74717384 ID=Msa1214210-mRNA-1:exon:25626;Parent=Msa1214210-mRNA-1
chr8_1 exon 74717767 74717898 74717767 ID=Msa1214210-mRNA-1:exon:25627;Parent=Msa1214210-mRNA-1
chr8_1 exon 74718219 74718781 74718219 ID=Msa1214210-mRNA-1:exon:25628;Parent=Msa1214210-mRNA-1
chr8_1 exon 74719028 74719085 74719028 ID=Msa1214210-mRNA-1:exon:25629;Parent=Msa1214210-mRNA-1
chr8_1 five_prime_UTR 74715183 74715218 74715183 ID=Msa1214210-mRNA-1:five_prime_utr;Parent=Msa1214210-mRNA-1
chr8_1 five_prime_UTR 74715475 74715536 74715475 ID=Msa1214210-mRNA-1:five_prime_utr;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74715537 74715764 74715537 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74715858 74716094 74715858 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74717075 74717267 74717075 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74717384 74717525 74717384 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74717767 74717898 74717767 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 CDS 74718219 74718465 74718219 ID=Msa1214210-mRNA-1:cds;Parent=Msa1214210-mRNA-1
chr8_1 three_prime_UTR 74718466 74718781 74718466 ID=Msa1214210-mRNA-1:three_prime_utr;Parent=Msa1214210-mRNA-1
chr8_1 three_prime_UTR 74719028 74719085 74719028 ID=Msa1214210-mRNA-1:three_prime_utr;Parent=Msa1214210-mRNA-1
Gene Sequence

>Msa1214210

ATGGCAATGGAGGTTACAGCCATGGCTTCACTTCCAACAACAAAACCTTCTCTTCCATCTCCTTCCACTTTACCTCACACAATCACCACCTTCTCAAAACCTCAACTTAGACGCATATCATTACCAACATCAACCACCATTTCACTACTTGCTCTTTTCACCCCTCCAAATGAAGCTAGAGCTGCTGTTAACATCTCCAAGGACCAAATTGTTTCTTCTCTCACCCAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTTGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTGTAGGGAGTGCTTTGAAGCCTGGCTTTGATACGGCGTTGCCAATTGTGCAGCAGGCTGGACAAGAGGCTTTGAAAATTGCTTCTCCAGCCTTCTCTGAGGCTTCCAAGAAGGCTCAAGAAGCACTTCAAAGTTCTGGTCTTGATACCCAAACAGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGATACTATAACTTCATCAGATCCTACCATGATTGCTGGAACAGCTGGAGCACTATTCATTGCATACCTCTTGTTTCCTCCTATCTGGTCTGCCATCTCCTTCAATTTTCGCGGTTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAATCCGGTATTCCTCGCCTTCCATCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTTCCAAACAAAATACGGGGACTGGTAAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGACTCGTACTCGGACTCAGCAAAGATAGTTGCTAGAACACTAACAGGGCTTGGATTTAAGAACACATGGATCGTTGGTGATGGATTTTCTGGAGGCAAAGGATGGTTACAGAGTAGATTAGGAACAGATTCGTATAAATTTTCGTTTGCAGAGGTGTTGTCACCATCCAGAATCATCCCTGCAGGTGTTAGAGGAGGTTTTGGAACAACCAGCAGGCAATCTACTCAGAAACTTCTTCCTGGGGCTGATTGA

Protein sequence

>Msa1214210

MAMEVTAMASLPTTKPSLPSPSTLPHTITTFSKPQLRRISLPTSTTISLLALFTPPNEARAAVNISKDQIVSSLTQVEQTIDQVQVVGSGFLDSAQRVAEAVGSALKPGFDTALPIVQQAGQEALKIASPAFSEASKKAQEALQSSGLDTQTAAKTVADAAQQTTKVIEGAKPIASSTMDTITSSDPTMIAGTAGALFIAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYILIDIRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPNKIRGLVRNVKRVEAEIAALKISYLKKINKGTNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVRGGFGTTSRQSTQKLLPGAD*