Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321390 | XP_003627843.1 | 81.166 | 223 | 11 | 1 | 1 | 223 | 1 | 192 | 1.33e-123 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321390 | sp|Q9LK88|NQR_ARATH | 62.727 | 220 | 51 | 1 | 3 | 222 | 8 | 196 | 2.38e-93 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321390 | B7FMX0 | 81.166 | 223 | 11 | 1 | 1 | 223 | 1 | 192 | 6.36e-124 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005160 | Msa1321390 | 0.810934 | 9.003767e-51 | -8.615850e-47 |
| Msa0008850 | Msa1321390 | 0.822842 | 1.907652e-53 | -8.615850e-47 |
| Msa0039200 | Msa1321390 | 0.814024 | 1.901919e-51 | -8.615850e-47 |
| Msa0047470 | Msa1321390 | 0.815337 | 9.735742e-52 | -8.615850e-47 |
| Msa0051100 | Msa1321390 | 0.826144 | 3.187605e-54 | -8.615850e-47 |
| Msa0057740 | Msa1321390 | 0.815279 | 1.002819e-51 | -8.615850e-47 |
| Msa0086820 | Msa1321390 | 0.812031 | 5.202746e-51 | -8.615850e-47 |
| Msa0103060 | Msa1321390 | 0.818432 | 1.966180e-52 | -8.615850e-47 |
| Msa0606060 | Msa1321390 | 0.800497 | 1.401681e-48 | -8.615850e-47 |
| Msa0635990 | Msa1321390 | 0.813554 | 2.413420e-51 | -8.615850e-47 |
| Msa0638040 | Msa1321390 | 0.828045 | 1.118044e-54 | -8.615850e-47 |
| Msa0639030 | Msa1321390 | 0.820604 | 6.284116e-53 | -8.615850e-47 |
| Msa0648300 | Msa1321390 | 0.812820 | 3.498053e-51 | -8.615850e-47 |
| Msa0653710 | Msa1321390 | 0.834784 | 2.453248e-56 | -8.615850e-47 |
| Msa0654060 | Msa1321390 | 0.806036 | 9.997408e-50 | -8.615850e-47 |
| Msa0656680 | Msa1321390 | 0.806069 | 9.840053e-50 | -8.615850e-47 |
| Msa0665040 | Msa1321390 | 0.810344 | 1.207606e-50 | -8.615850e-47 |
| Msa0697600 | Msa1321390 | 0.826128 | 3.215336e-54 | -8.615850e-47 |
| Msa0698900 | Msa1321390 | 0.819801 | 9.598921e-53 | -8.615850e-47 |
| Msa0705050 | Msa1321390 | 0.820950 | 5.231640e-53 | -8.615850e-47 |
| Msa0724050 | Msa1321390 | 0.832085 | 1.156211e-55 | -8.615850e-47 |
| Msa0739610 | Msa1321390 | 0.813429 | 2.571717e-51 | -8.615850e-47 |
| Msa0763880 | Msa1321390 | 0.825319 | 5.001358e-54 | -8.615850e-47 |
| Msa0763910 | Msa1321390 | 0.814951 | 1.185700e-51 | -8.615850e-47 |
| Msa0773290 | Msa1321390 | 0.805515 | 1.286357e-49 | -8.615850e-47 |
| Msa0782030 | Msa1321390 | 0.817766 | 2.780740e-52 | -8.615850e-47 |
| Msa0793060 | Msa1321390 | 0.836057 | 1.169312e-56 | -8.615850e-47 |
| Msa0822370 | Msa1321390 | 0.839036 | 2.014599e-57 | -8.615850e-47 |
| Msa0824770 | Msa1321390 | 0.811729 | 6.052321e-51 | -8.615850e-47 |
| Msa0133670 | Msa1321390 | 0.811964 | 5.378600e-51 | -8.615850e-47 |
| Msa0133880 | Msa1321390 | 0.809554 | 1.787073e-50 | -8.615850e-47 |
| Msa0184120 | Msa1321390 | 0.814002 | 1.922729e-51 | -8.615850e-47 |
| Msa0188500 | Msa1321390 | 0.816532 | 5.268808e-52 | -8.615850e-47 |
| Msa0197730 | Msa1321390 | 0.813937 | 1.987277e-51 | -8.615850e-47 |
| Msa0203180 | Msa1321390 | 0.832400 | 9.660524e-56 | -8.615850e-47 |
| Msa0210880 | Msa1321390 | 0.829064 | 6.343108e-55 | -8.615850e-47 |
| Msa0227290 | Msa1321390 | 0.800602 | 1.334562e-48 | -8.615850e-47 |
| Msa0230980 | Msa1321390 | 0.828637 | 8.047077e-55 | -8.615850e-47 |
| Msa1231520 | Msa1321390 | 0.836925 | 7.033120e-57 | -8.615850e-47 |
| Msa1237260 | Msa1321390 | 0.806539 | 7.830698e-50 | -8.615850e-47 |
| Msa1240820 | Msa1321390 | 0.850847 | 1.302863e-60 | -8.615850e-47 |
| Msa1246420 | Msa1321390 | 0.839483 | 1.542542e-57 | -8.615850e-47 |
| Msa1274310 | Msa1321390 | 0.814674 | 1.365830e-51 | -8.615850e-47 |
| Msa1278420 | Msa1321390 | 0.806015 | 1.009861e-49 | -8.615850e-47 |
| Msa1282210 | Msa1321390 | 0.855555 | 5.832514e-62 | -8.615850e-47 |
| Msa1283120 | Msa1321390 | 0.805646 | 1.207103e-49 | -8.615850e-47 |
| Msa1287160 | Msa1321390 | 0.815906 | 7.270569e-52 | -8.615850e-47 |
| Msa1287340 | Msa1321390 | 0.832561 | 8.812354e-56 | -8.615850e-47 |
| Msa1299370 | Msa1321390 | 0.810977 | 8.815131e-51 | -8.615850e-47 |
| Msa1317710 | Msa1321390 | 0.800064 | 1.717393e-48 | -8.615850e-47 |
| Msa1321390 | Msa1322420 | 0.818784 | 1.636428e-52 | -8.615850e-47 |
| Msa1321390 | Msa1335720 | 0.817793 | 2.742163e-52 | -8.615850e-47 |
| Msa1321390 | Msa1353280 | 0.812678 | 3.757251e-51 | -8.615850e-47 |
| Msa1321390 | Msa1360380 | 0.852500 | 4.433445e-61 | -8.615850e-47 |
| Msa1321390 | Msa1392680 | 0.803043 | 4.208893e-49 | -8.615850e-47 |
| Msa1321390 | Msa1405470 | 0.802470 | 5.526207e-49 | -8.615850e-47 |
| Msa1321390 | Msa1413900 | 0.829007 | 6.549314e-55 | -8.615850e-47 |
| Msa1321390 | Msa1428440 | 0.809745 | 1.625314e-50 | -8.615850e-47 |
| Msa1321390 | Msa1435470 | 0.805468 | 1.315797e-49 | -8.615850e-47 |
| Msa1321390 | Msa1440180 | 0.816656 | 4.940691e-52 | -8.615850e-47 |
| Msa1321390 | Msa1449740 | 0.812792 | 3.547960e-51 | -8.615850e-47 |
| Msa1321390 | Msa1458920 | 0.826398 | 2.773389e-54 | -8.615850e-47 |
| Msa0369780 | Msa1321390 | 0.809864 | 1.532592e-50 | -8.615850e-47 |
| Msa0379500 | Msa1321390 | 0.810192 | 1.302333e-50 | -8.615850e-47 |
| Msa0404180 | Msa1321390 | 0.813818 | 2.111536e-51 | -8.615850e-47 |
| Msa0417150 | Msa1321390 | 0.830312 | 3.152410e-55 | -8.615850e-47 |
| Msa0421800 | Msa1321390 | 0.813351 | 2.674568e-51 | -8.615850e-47 |
| Msa0426860 | Msa1321390 | 0.804187 | 2.436430e-49 | -8.615850e-47 |
| Msa0427050 | Msa1321390 | 0.805427 | 1.342176e-49 | -8.615850e-47 |
| Msa0454940 | Msa1321390 | 0.822216 | 2.667115e-53 | -8.615850e-47 |
| Msa0456480 | Msa1321390 | 0.837054 | 6.519294e-57 | -8.615850e-47 |
| Msa0463990 | Msa1321390 | 0.811858 | 5.672750e-51 | -8.615850e-47 |
| Msa0467800 | Msa1321390 | 0.808845 | 2.535532e-50 | -8.615850e-47 |
| Msa0467880 | Msa1321390 | 0.809735 | 1.633545e-50 | -8.615850e-47 |
| Msa1030430 | Msa1321390 | 0.821789 | 3.349814e-53 | -8.615850e-47 |
| Msa1032350 | Msa1321390 | 0.806097 | 9.706721e-50 | -8.615850e-47 |
| Msa1033160 | Msa1321390 | 0.802774 | 4.782938e-49 | -8.615850e-47 |
| Msa1038320 | Msa1321390 | 0.801242 | 9.876415e-49 | -8.615850e-47 |
| Msa1040730 | Msa1321390 | -0.803846 | 2.868175e-49 | -8.615850e-47 |
| Msa1043870 | Msa1321390 | 0.820732 | 5.870076e-53 | -8.615850e-47 |
| Msa1055360 | Msa1321390 | 0.808918 | 2.446222e-50 | -8.615850e-47 |
| Msa1079610 | Msa1321390 | 0.810283 | 1.245192e-50 | -8.615850e-47 |
| Msa1102180 | Msa1321390 | 0.811565 | 6.568523e-51 | -8.615850e-47 |
| Msa0243470 | Msa1321390 | 0.807740 | 4.361634e-50 | -8.615850e-47 |
| Msa0246300 | Msa1321390 | 0.808923 | 2.439778e-50 | -8.615850e-47 |
| Msa0251150 | Msa1321390 | 0.809336 | 1.990229e-50 | -8.615850e-47 |
| Msa0265210 | Msa1321390 | 0.817827 | 2.693995e-52 | -8.615850e-47 |
| Msa0270460 | Msa1321390 | 0.832782 | 7.768452e-56 | -8.615850e-47 |
| Msa0281940 | Msa1321390 | 0.805769 | 1.137636e-49 | -8.615850e-47 |
| Msa0284870 | Msa1321390 | 0.826745 | 2.292038e-54 | -8.615850e-47 |
| Msa0303200 | Msa1321390 | 0.808311 | 3.297073e-50 | -8.615850e-47 |
| Msa0323630 | Msa1321390 | 0.811417 | 7.073678e-51 | -8.615850e-47 |
| Msa0330270 | Msa1321390 | 0.806668 | 7.356052e-50 | -8.615850e-47 |
| Msa0362430 | Msa1321390 | 0.837610 | 4.695641e-57 | -8.615850e-47 |
| Msa1108530 | Msa1321390 | 0.816648 | 4.962033e-52 | -8.615850e-47 |
| Msa1124440 | Msa1321390 | 0.809434 | 1.896276e-50 | -8.615850e-47 |
| Msa1138600 | Msa1321390 | 0.835089 | 2.055689e-56 | -8.615850e-47 |
| Msa1152280 | Msa1321390 | 0.815965 | 7.055773e-52 | -8.615850e-47 |
| Msa1161160 | Msa1321390 | 0.824053 | 9.940370e-54 | -8.615850e-47 |
| Msa1168130 | Msa1321390 | 0.802577 | 5.252391e-49 | -8.615850e-47 |
| Msa1177620 | Msa1321390 | 0.804177 | 2.448206e-49 | -8.615850e-47 |
| Msa1186580 | Msa1321390 | 0.885028 | 1.156700e-71 | -8.615850e-47 |
| Msa1198450 | Msa1321390 | 0.804993 | 1.654257e-49 | -8.615850e-47 |
| Msa1211260 | Msa1321390 | 0.813736 | 2.200956e-51 | -8.615850e-47 |
| Msa1211300 | Msa1321390 | 0.837692 | 4.474563e-57 | -8.615850e-47 |
| Msa1211390 | Msa1321390 | 0.856568 | 2.947243e-62 | -8.615850e-47 |
| Msa1220740 | Msa1321390 | 0.800431 | 1.445924e-48 | -8.615850e-47 |
| Msa0502910 | Msa1321390 | 0.817842 | 2.673562e-52 | -8.615850e-47 |
| Msa0509540 | Msa1321390 | 0.809184 | 2.144698e-50 | -8.615850e-47 |
| Msa0514260 | Msa1321390 | 0.822117 | 2.811815e-53 | -8.615850e-47 |
| Msa0553520 | Msa1321390 | 0.803446 | 3.472014e-49 | -8.615850e-47 |
| Msa0568490 | Msa1321390 | 0.809428 | 1.901129e-50 | -8.615850e-47 |
| Msa0598250 | Msa1321390 | 0.809829 | 1.559312e-50 | -8.615850e-47 |
| Msa0844100 | Msa1321390 | 0.808446 | 3.084689e-50 | -8.615850e-47 |
| Msa0850740 | Msa1321390 | 0.802477 | 5.506159e-49 | -8.615850e-47 |
| Msa0861800 | Msa1321390 | 0.839020 | 2.033836e-57 | -8.615850e-47 |
| Msa0887070 | Msa1321390 | 0.803975 | 2.696532e-49 | -8.615850e-47 |
| Msa0934830 | Msa1321390 | 0.815036 | 1.135798e-51 | -8.615850e-47 |
| Msa0964650 | Msa1321390 | 0.808943 | 2.415280e-50 | -8.615850e-47 |
| Msa0971860 | Msa1321390 | 0.827025 | 1.964892e-54 | -8.615850e-47 |
| Msa0973130 | Msa1321390 | 0.820076 | 8.303846e-53 | -8.615850e-47 |
| Msa0973230 | Msa1321390 | 0.812338 | 4.458927e-51 | -8.615850e-47 |
| Msa0978000 | Msa1321390 | 0.804217 | 2.401470e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321390 | MtrunA17_Chr8g0353131 | 81.166 | 223 | 11 | 1 | 1 | 223 | 1 | 192 | 1.22e-127 | 358 |
| Msa1321390 | MtrunA17_Chr3g0084221 | 65.596 | 218 | 44 | 1 | 6 | 223 | 5 | 191 | 6.27e-101 | 290 |
| Msa1321390 | MtrunA17_Chr3g0084161 | 61.187 | 219 | 54 | 1 | 5 | 223 | 4 | 191 | 1.71e-96 | 279 |
| Msa1321390 | MtrunA17_Chr3g0084201 | 61.818 | 220 | 52 | 2 | 4 | 223 | 3 | 190 | 1.59e-93 | 271 |
| Msa1321390 | MtrunA17_Chr3g0084191 | 53.211 | 218 | 74 | 2 | 4 | 221 | 3 | 192 | 7.70e-77 | 239 |
| Msa1321390 | MtrunA17_Chr3g0082411 | 60.317 | 63 | 20 | 1 | 82 | 139 | 1 | 63 | 2.39e-19 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321390 | AT3G27890.1 | 62.727 | 220 | 51 | 1 | 3 | 222 | 8 | 196 | 2.42e-94 | 274 |
Find 51 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATATGAGTATATGATTT+TGG | 0.169387 | 8_4:-26939140 | Msa1321390:three_prime_UTR |
| ATCAAAGTGGCAGCTCTTTC+TGG | 0.181158 | 8_4:-26940566 | Msa1321390:CDS |
| TAGTGCATTAGAGTAATTTA+AGG | 0.190097 | 8_4:+26939172 | None:intergenic |
| TTTGACCAATGTGAATAATT+TGG | 0.258338 | 8_4:+26939040 | None:intergenic |
| CATTGCAGGCATTTACTCTA+AGG | 0.275339 | 8_4:-26939214 | Msa1321390:CDS |
| CCATCATCATTGAACTTTGC+AGG | 0.314182 | 8_4:+26939287 | None:intergenic |
| TTGCTGAAATCATCTAAATA+TGG | 0.317447 | 8_4:+26938905 | None:intergenic |
| CGTCTAGACCACCAAATGTT+TGG | 0.318819 | 8_4:-26939451 | Msa1321390:CDS |
| CATTGAAGAATGCAATTGAT+TGG | 0.367565 | 8_4:-26939475 | Msa1321390:CDS |
| GTCTAGACCACCAAATGTTT+GGG | 0.381599 | 8_4:-26939450 | Msa1321390:CDS |
| GCTTTGCCAGCCCAAACATT+TGG | 0.411118 | 8_4:+26939440 | None:intergenic |
| CAATCAATTGCATTCTTCAA+TGG | 0.420729 | 8_4:+26939476 | None:intergenic |
| AGAAAAGCTTCATACCATTC+AGG | 0.420835 | 8_4:-26940536 | Msa1321390:CDS |
| GCATTTACTCTAAGGCTTCA+AGG | 0.430875 | 8_4:-26939206 | Msa1321390:CDS |
| GCAAATTATTCACATTGGTC+CGG | 0.453409 | 8_4:-26938886 | None:intergenic |
| ATTGAAGAATGCAATTGATT+GGG | 0.454057 | 8_4:-26939474 | Msa1321390:CDS |
| TTGCCAGCCCAAACATTTGG+TGG | 0.456284 | 8_4:+26939443 | None:intergenic |
| ATAAGCACTGGAGGAGACTT+TGG | 0.465806 | 8_4:-26939407 | Msa1321390:CDS |
| GCACTGGAGGAGACTTTGGC+GGG | 0.469020 | 8_4:-26939403 | Msa1321390:CDS |
| AAGACGAACCAGCACGGATA+AGG | 0.470569 | 8_4:+26940513 | None:intergenic |
| CATTCAGGCCTTATCCGTGC+TGG | 0.509003 | 8_4:-26940521 | Msa1321390:CDS |
| CCTGCAAAGTTCAATGATGA+TGG | 0.528301 | 8_4:-26939287 | Msa1321390:CDS |
| GCAGCTGCAATCATAAGCAC+TGG | 0.542454 | 8_4:-26939419 | Msa1321390:CDS |
| TTTGATTGATGAAGGGGCTA+AGG | 0.544643 | 8_4:-26939261 | Msa1321390:CDS |
| GCAGCAATTGAGTTGAGTAA+AGG | 0.545033 | 8_4:-26940410 | Msa1321390:CDS |
| TTGAGTAAAGGAGCAATTGA+AGG | 0.546127 | 8_4:-26940398 | Msa1321390:CDS |
| CAGCACGGATAAGGCCTGAA+TGG | 0.546637 | 8_4:+26940522 | None:intergenic |
| AGACCACCAAATGTTTGGGC+TGG | 0.554510 | 8_4:-26939446 | Msa1321390:CDS |
| TTTCAGCAAATTATTCACAT+TGG | 0.557866 | 8_4:-26938891 | Msa1321390:three_prime_UTR |
| GATGGCGATTTGATTGATGA+AGG | 0.564435 | 8_4:-26939269 | Msa1321390:CDS |
| AACACTGATCTTGAGAGCAA+TGG | 0.575389 | 8_4:-26940332 | Msa1321390:CDS |
| TGAGACCAAATTATTCACAT+TGG | 0.575526 | 8_4:-26939045 | Msa1321390:intron |
| GTGAGAGAGTAGTTATACTC+AGG | 0.575737 | 8_4:+26940239 | None:intergenic |
| CACTATCATCTACGCCAAGT+TGG | 0.576435 | 8_4:-26939371 | Msa1321390:CDS |
| CGAAAAGCTTCAACAAGAGG+TGG | 0.582016 | 8_4:+26940302 | None:intergenic |
| GATCAATATAAATTCCAACT+TGG | 0.584290 | 8_4:+26939357 | None:intergenic |
| AGCACTGGAGGAGACTTTGG+CGG | 0.584571 | 8_4:-26939404 | Msa1321390:CDS |
| GAGTATAACTACTCTCTCAC+AGG | 0.585054 | 8_4:-26940236 | Msa1321390:intron |
| TATTATTCAAAATGTATGTG+AGG | 0.591253 | 8_4:+26939082 | None:intergenic |
| TGGCGAAAAGCTTCAACAAG+AGG | 0.594853 | 8_4:+26940299 | None:intergenic |
| TCAAGATCAGTGTTATACAT+TGG | 0.601336 | 8_4:+26940341 | None:intergenic |
| ATGGCGATTTGATTGATGAA+GGG | 0.608092 | 8_4:-26939268 | Msa1321390:CDS |
| CAAAAGAAGACGAACCAGCA+CGG | 0.622016 | 8_4:+26940507 | None:intergenic |
| ACTGGAGGAGACTTTGGCGG+GGG | 0.627120 | 8_4:-26939401 | Msa1321390:CDS |
| AATGCTCTTAGAAAGAACTC+AGG | 0.630349 | 8_4:+26939317 | None:intergenic |
| TCATCATTGAACTTTGCAGG+TGG | 0.635212 | 8_4:+26939290 | None:intergenic |
| TGGCGATTTGATTGATGAAG+GGG | 0.641939 | 8_4:-26939267 | Msa1321390:CDS |
| CACTGGAGGAGACTTTGGCG+GGG | 0.645839 | 8_4:-26939402 | Msa1321390:CDS |
| GCTGCAATCATAAGCACTGG+AGG | 0.650272 | 8_4:-26939416 | Msa1321390:CDS |
| TATCAGCTTGAAGAATCTTG+TGG | 0.652286 | 8_4:+26940279 | None:intergenic |
| GGCAGAAGCAGTGATCAAAG+TGG | 0.707321 | 8_4:-26940579 | Msa1321390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAATTAAAAAATTGAT+AGG | + | chr8_4:26939895-26939914 | None:intergenic | 10.0% |
| !!! | ATATATATACTATCTTTTTT+TGG | - | chr8_4:26940470-26940489 | Msa1321390:CDS | 10.0% |
| !! | TTTGTAATTAAAAAATTGAT+AGG | + | chr8_4:26939895-26939914 | None:intergenic | 10.0% |
| !!! | ATATATATACTATCTTTTTT+TGG | - | chr8_4:26940470-26940489 | Msa1321390:CDS | 10.0% |
| !! | TATTATATAAATAGTTGCAA+AGG | + | chr8_4:26939407-26939426 | None:intergenic | 15.0% |
| !! | TATTATATAAATAGTTGCAA+AGG | + | chr8_4:26939407-26939426 | None:intergenic | 15.0% |
| !!! | AGGCAATAATTGTAATTTTT+TGG | - | chr8_4:26939529-26939548 | Msa1321390:intron | 20.0% |
| !!! | GGCAATAATTGTAATTTTTT+GGG | - | chr8_4:26939530-26939549 | Msa1321390:intron | 20.0% |
| !! | AAAAAATTGATAGGTAGAAA+TGG | + | chr8_4:26939886-26939905 | None:intergenic | 20.0% |
| !!! | CAAATATGAGTATATGATTT+TGG | - | chr8_4:26940330-26940349 | Msa1321390:CDS | 20.0% |
| !!! | GAGGAAATAATATATTTTCA+AGG | + | chr8_4:26940372-26940391 | None:intergenic | 20.0% |
| !! | TATTATTCAAAATGTATGTG+AGG | + | chr8_4:26940391-26940410 | None:intergenic | 20.0% |
| !!! | AGGCAATAATTGTAATTTTT+TGG | - | chr8_4:26939529-26939548 | Msa1321390:intron | 20.0% |
| !!! | GGCAATAATTGTAATTTTTT+GGG | - | chr8_4:26939530-26939549 | Msa1321390:intron | 20.0% |
| !! | AAAAAATTGATAGGTAGAAA+TGG | + | chr8_4:26939886-26939905 | None:intergenic | 20.0% |
| !!! | CAAATATGAGTATATGATTT+TGG | - | chr8_4:26940330-26940349 | Msa1321390:CDS | 20.0% |
| !!! | GAGGAAATAATATATTTTCA+AGG | + | chr8_4:26940372-26940391 | None:intergenic | 20.0% |
| !! | TATTATTCAAAATGTATGTG+AGG | + | chr8_4:26940391-26940410 | None:intergenic | 20.0% |
| !! | TCTTTTCTTCTTCTATTACA+AGG | + | chr8_4:26939314-26939333 | None:intergenic | 25.0% |
| ! | ATATAAATAGTTGCAAAGGT+AGG | + | chr8_4:26939403-26939422 | None:intergenic | 25.0% |
| ! | TATAATACTATGATTCCTCT+TGG | - | chr8_4:26939420-26939439 | Msa1321390:CDS | 25.0% |
| ! | TTTGCAATCAAATATGTCAT+TGG | + | chr8_4:26939488-26939507 | None:intergenic | 25.0% |
| ! | ATGACATATTTGATTGCAAA+TGG | - | chr8_4:26939488-26939507 | Msa1321390:intron | 25.0% |
| ! | TTGACACTATCAACATTTAA+AGG | - | chr8_4:26939564-26939583 | Msa1321390:intron | 25.0% |
| ! | TGACACTATCAACATTTAAA+GGG | - | chr8_4:26939565-26939584 | Msa1321390:intron | 25.0% |
| ! | ATTGAAGAATGCAATTGATT+GGG | - | chr8_4:26939996-26940015 | Msa1321390:intron | 25.0% |
| ! | GATCAATATAAATTCCAACT+TGG | + | chr8_4:26940116-26940135 | None:intergenic | 25.0% |
| ! | TAGTGCATTAGAGTAATTTA+AGG | + | chr8_4:26940301-26940320 | None:intergenic | 25.0% |
| ! | TTTGACCAATGTGAATAATT+TGG | + | chr8_4:26940433-26940452 | None:intergenic | 25.0% |
| ! | ATATATCAAGCACATGATTT+AGG | + | chr8_4:26940456-26940475 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTTCAAGATAAAG+TGG | - | chr8_4:26940486-26940505 | Msa1321390:CDS | 25.0% |
| ! | TTGCTGAAATCATCTAAATA+TGG | + | chr8_4:26940568-26940587 | None:intergenic | 25.0% |
| ! | TTTCAGCAAATTATTCACAT+TGG | - | chr8_4:26940579-26940598 | Msa1321390:CDS | 25.0% |
| !! | TCTTTTCTTCTTCTATTACA+AGG | + | chr8_4:26939314-26939333 | None:intergenic | 25.0% |
| ! | ATATAAATAGTTGCAAAGGT+AGG | + | chr8_4:26939403-26939422 | None:intergenic | 25.0% |
| ! | TATAATACTATGATTCCTCT+TGG | - | chr8_4:26939420-26939439 | Msa1321390:CDS | 25.0% |
| ! | TTTGCAATCAAATATGTCAT+TGG | + | chr8_4:26939488-26939507 | None:intergenic | 25.0% |
| ! | ATGACATATTTGATTGCAAA+TGG | - | chr8_4:26939488-26939507 | Msa1321390:intron | 25.0% |
| ! | TTGACACTATCAACATTTAA+AGG | - | chr8_4:26939564-26939583 | Msa1321390:intron | 25.0% |
| ! | TGACACTATCAACATTTAAA+GGG | - | chr8_4:26939565-26939584 | Msa1321390:intron | 25.0% |
| ! | ATTGAAGAATGCAATTGATT+GGG | - | chr8_4:26939996-26940015 | Msa1321390:intron | 25.0% |
| ! | GATCAATATAAATTCCAACT+TGG | + | chr8_4:26940116-26940135 | None:intergenic | 25.0% |
| ! | TAGTGCATTAGAGTAATTTA+AGG | + | chr8_4:26940301-26940320 | None:intergenic | 25.0% |
| ! | TTTGACCAATGTGAATAATT+TGG | + | chr8_4:26940433-26940452 | None:intergenic | 25.0% |
| ! | ATATATCAAGCACATGATTT+AGG | + | chr8_4:26940456-26940475 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTTCAAGATAAAG+TGG | - | chr8_4:26940486-26940505 | Msa1321390:CDS | 25.0% |
| ! | TTGCTGAAATCATCTAAATA+TGG | + | chr8_4:26940568-26940587 | None:intergenic | 25.0% |
| ! | TTTCAGCAAATTATTCACAT+TGG | - | chr8_4:26940579-26940598 | Msa1321390:CDS | 25.0% |
| !!! | GTTGTAGTTTTGAATTTGCA+TGG | - | chr8_4:26939025-26939044 | Msa1321390:intron | 30.0% |
| TCAAGATCAGTGTTATACAT+TGG | + | chr8_4:26939132-26939151 | None:intergenic | 30.0% | |
| ! | CGATTTTTGTTCAAGAAGTT+CGG | - | chr8_4:26939362-26939381 | Msa1321390:CDS | 30.0% |
| ! | AAATATGTCATTGGTACTGA+GGG | + | chr8_4:26939479-26939498 | None:intergenic | 30.0% |
| !! | TATGCAATCGTTTTTGCAAT+GGG | + | chr8_4:26939718-26939737 | None:intergenic | 30.0% |
| !! | ATATGCAATCGTTTTTGCAA+TGG | + | chr8_4:26939719-26939738 | None:intergenic | 30.0% |
| ATTGCAAAAACGATTGCATA+TGG | - | chr8_4:26939718-26939737 | Msa1321390:intron | 30.0% | |
| CTATATCTCCGAATTTAGAA+GGG | + | chr8_4:26939820-26939839 | None:intergenic | 30.0% | |
| ACTATATCTCCGAATTTAGA+AGG | + | chr8_4:26939821-26939840 | None:intergenic | 30.0% | |
| CAATCAATTGCATTCTTCAA+TGG | + | chr8_4:26939997-26940016 | None:intergenic | 30.0% | |
| CATTGAAGAATGCAATTGAT+TGG | - | chr8_4:26939995-26940014 | Msa1321390:intron | 30.0% | |
| TGAGACCAAATTATTCACAT+TGG | - | chr8_4:26940425-26940444 | Msa1321390:CDS | 30.0% | |
| CAAATTATTCACATTGGTCA+TGG | - | chr8_4:26940431-26940450 | Msa1321390:CDS | 30.0% | |
| !!! | GTTGTAGTTTTGAATTTGCA+TGG | - | chr8_4:26939025-26939044 | Msa1321390:intron | 30.0% |
| TCAAGATCAGTGTTATACAT+TGG | + | chr8_4:26939132-26939151 | None:intergenic | 30.0% | |
| ! | CGATTTTTGTTCAAGAAGTT+CGG | - | chr8_4:26939362-26939381 | Msa1321390:CDS | 30.0% |
| ! | AAATATGTCATTGGTACTGA+GGG | + | chr8_4:26939479-26939498 | None:intergenic | 30.0% |
| !! | TATGCAATCGTTTTTGCAAT+GGG | + | chr8_4:26939718-26939737 | None:intergenic | 30.0% |
| !! | ATATGCAATCGTTTTTGCAA+TGG | + | chr8_4:26939719-26939738 | None:intergenic | 30.0% |
| ATTGCAAAAACGATTGCATA+TGG | - | chr8_4:26939718-26939737 | Msa1321390:intron | 30.0% | |
| CTATATCTCCGAATTTAGAA+GGG | + | chr8_4:26939820-26939839 | None:intergenic | 30.0% | |
| ACTATATCTCCGAATTTAGA+AGG | + | chr8_4:26939821-26939840 | None:intergenic | 30.0% | |
| CAATCAATTGCATTCTTCAA+TGG | + | chr8_4:26939997-26940016 | None:intergenic | 30.0% | |
| CATTGAAGAATGCAATTGAT+TGG | - | chr8_4:26939995-26940014 | Msa1321390:intron | 30.0% | |
| TGAGACCAAATTATTCACAT+TGG | - | chr8_4:26940425-26940444 | Msa1321390:CDS | 30.0% | |
| ! | ATGGTATGAAGCTTTTCTGA+AGG | + | chr8_4:26938932-26938951 | None:intergenic | 35.0% |
| AGAAAAGCTTCATACCATTC+AGG | - | chr8_4:26938934-26938953 | Msa1321390:intron | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | - | chr8_4:26939072-26939091 | Msa1321390:three_prime_UTR | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | + | chr8_4:26939194-26939213 | None:intergenic | 35.0% | |
| CAAATATGTCATTGGTACTG+AGG | + | chr8_4:26939480-26939499 | None:intergenic | 35.0% | |
| !! | TTGCAGCTTTGAAATGATCA+CGG | + | chr8_4:26939661-26939680 | None:intergenic | 35.0% |
| GTCAAAGTGAAGGAACTTAA+CGG | - | chr8_4:26939684-26939703 | Msa1321390:intron | 35.0% | |
| CACTAAGTCTGTGTTTGATA+AGG | + | chr8_4:26939861-26939880 | None:intergenic | 35.0% | |
| ACACAAAACAAAGGTGAAGA+TGG | + | chr8_4:26939968-26939987 | None:intergenic | 35.0% | |
| TGGAGCTAAACACAAAACAA+AGG | + | chr8_4:26939977-26939996 | None:intergenic | 35.0% | |
| AATGCTCTTAGAAAGAACTC+AGG | + | chr8_4:26940156-26940175 | None:intergenic | 35.0% | |
| ATGGCGATTTGATTGATGAA+GGG | - | chr8_4:26940202-26940221 | Msa1321390:intron | 35.0% | |
| ! | GCAAGTTCTTTTATCATTGC+AGG | - | chr8_4:26940242-26940261 | Msa1321390:CDS | 35.0% |
| ! | ATGGTATGAAGCTTTTCTGA+AGG | + | chr8_4:26938932-26938951 | None:intergenic | 35.0% |
| AGAAAAGCTTCATACCATTC+AGG | - | chr8_4:26938934-26938953 | Msa1321390:intron | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | - | chr8_4:26939072-26939091 | Msa1321390:three_prime_UTR | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | + | chr8_4:26939194-26939213 | None:intergenic | 35.0% | |
| CAAATATGTCATTGGTACTG+AGG | + | chr8_4:26939480-26939499 | None:intergenic | 35.0% | |
| !! | TTGCAGCTTTGAAATGATCA+CGG | + | chr8_4:26939661-26939680 | None:intergenic | 35.0% |
| GTCAAAGTGAAGGAACTTAA+CGG | - | chr8_4:26939684-26939703 | Msa1321390:intron | 35.0% | |
| CACTAAGTCTGTGTTTGATA+AGG | + | chr8_4:26939861-26939880 | None:intergenic | 35.0% | |
| ACACAAAACAAAGGTGAAGA+TGG | + | chr8_4:26939968-26939987 | None:intergenic | 35.0% | |
| TGGAGCTAAACACAAAACAA+AGG | + | chr8_4:26939977-26939996 | None:intergenic | 35.0% | |
| AATGCTCTTAGAAAGAACTC+AGG | + | chr8_4:26940156-26940175 | None:intergenic | 35.0% | |
| ATGGCGATTTGATTGATGAA+GGG | - | chr8_4:26940202-26940221 | Msa1321390:intron | 35.0% | |
| ! | GCAAGTTCTTTTATCATTGC+AGG | - | chr8_4:26940242-26940261 | Msa1321390:CDS | 35.0% |
| !! | GCAGCAATTGAGTTGAGTAA+AGG | - | chr8_4:26939060-26939079 | Msa1321390:three_prime_UTR | 40.0% |
| AACACTGATCTTGAGAGCAA+TGG | - | chr8_4:26939138-26939157 | Msa1321390:three_prime_UTR | 40.0% | |
| GTGAGAGAGTAGTTATACTC+AGG | + | chr8_4:26939234-26939253 | None:intergenic | 40.0% | |
| GAGTATAACTACTCTCTCAC+AGG | - | chr8_4:26939234-26939253 | Msa1321390:CDS | 40.0% | |
| GTTGCAAAGGTAGGAATCAT+TGG | + | chr8_4:26939394-26939413 | None:intergenic | 40.0% | |
| ACTATGATTCCTCTTGGTCT+TGG | - | chr8_4:26939426-26939445 | Msa1321390:CDS | 40.0% | |
| !! | GGATGACTCTAGTTTGTTCT+AGG | - | chr8_4:26939509-26939528 | Msa1321390:intron | 40.0% |
| AAACATGCGCTAAAGCTATC+AGG | + | chr8_4:26939598-26939617 | None:intergenic | 40.0% | |
| CGCATGTTTAGTAATGCGTT+GGG | - | chr8_4:26939609-26939628 | Msa1321390:intron | 40.0% | |
| !! | GAAATGATCACGGTGTTGTT+GGG | + | chr8_4:26939651-26939670 | None:intergenic | 40.0% |
| !! | TGAAATGATCACGGTGTTGT+TGG | + | chr8_4:26939652-26939671 | None:intergenic | 40.0% |
| GCTGCAAATTGTCAAAGTGA+AGG | - | chr8_4:26939674-26939693 | Msa1321390:intron | 40.0% | |
| AAAGTGAAGGAACTTAACGG+TGG | - | chr8_4:26939687-26939706 | Msa1321390:intron | 40.0% | |
| AAACGATTGCATATGGCTCA+CGG | - | chr8_4:26939725-26939744 | Msa1321390:intron | 40.0% | |
| AACTGCAGCCCTTCTAAATT+CGG | - | chr8_4:26939809-26939828 | Msa1321390:intron | 40.0% | |
| GTCTAGACCACCAAATGTTT+GGG | - | chr8_4:26940020-26940039 | Msa1321390:intron | 40.0% | |
| TCATCATTGAACTTTGCAGG+TGG | + | chr8_4:26940183-26940202 | None:intergenic | 40.0% | |
| CCATCATCATTGAACTTTGC+AGG | + | chr8_4:26940186-26940205 | None:intergenic | 40.0% | |
| CCTGCAAAGTTCAATGATGA+TGG | - | chr8_4:26940183-26940202 | Msa1321390:intron | 40.0% | |
| GATGGCGATTTGATTGATGA+AGG | - | chr8_4:26940201-26940220 | Msa1321390:intron | 40.0% | |
| TGGCGATTTGATTGATGAAG+GGG | - | chr8_4:26940203-26940222 | Msa1321390:intron | 40.0% | |
| TTTGATTGATGAAGGGGCTA+AGG | - | chr8_4:26940209-26940228 | Msa1321390:intron | 40.0% | |
| CATTGCAGGCATTTACTCTA+AGG | - | chr8_4:26940256-26940275 | Msa1321390:CDS | 40.0% | |
| !! | GCATTTACTCTAAGGCTTCA+AGG | - | chr8_4:26940264-26940283 | Msa1321390:CDS | 40.0% |
| !! | GCAGCAATTGAGTTGAGTAA+AGG | - | chr8_4:26939060-26939079 | Msa1321390:three_prime_UTR | 40.0% |
| AACACTGATCTTGAGAGCAA+TGG | - | chr8_4:26939138-26939157 | Msa1321390:three_prime_UTR | 40.0% | |
| GTGAGAGAGTAGTTATACTC+AGG | + | chr8_4:26939234-26939253 | None:intergenic | 40.0% | |
| GAGTATAACTACTCTCTCAC+AGG | - | chr8_4:26939234-26939253 | Msa1321390:CDS | 40.0% | |
| GTTGCAAAGGTAGGAATCAT+TGG | + | chr8_4:26939394-26939413 | None:intergenic | 40.0% | |
| ACTATGATTCCTCTTGGTCT+TGG | - | chr8_4:26939426-26939445 | Msa1321390:CDS | 40.0% | |
| !! | GGATGACTCTAGTTTGTTCT+AGG | - | chr8_4:26939509-26939528 | Msa1321390:intron | 40.0% |
| AAACATGCGCTAAAGCTATC+AGG | + | chr8_4:26939598-26939617 | None:intergenic | 40.0% | |
| CGCATGTTTAGTAATGCGTT+GGG | - | chr8_4:26939609-26939628 | Msa1321390:intron | 40.0% | |
| !! | GAAATGATCACGGTGTTGTT+GGG | + | chr8_4:26939651-26939670 | None:intergenic | 40.0% |
| !! | TGAAATGATCACGGTGTTGT+TGG | + | chr8_4:26939652-26939671 | None:intergenic | 40.0% |
| GCTGCAAATTGTCAAAGTGA+AGG | - | chr8_4:26939674-26939693 | Msa1321390:intron | 40.0% | |
| AAAGTGAAGGAACTTAACGG+TGG | - | chr8_4:26939687-26939706 | Msa1321390:intron | 40.0% | |
| AAACGATTGCATATGGCTCA+CGG | - | chr8_4:26939725-26939744 | Msa1321390:intron | 40.0% | |
| AACTGCAGCCCTTCTAAATT+CGG | - | chr8_4:26939809-26939828 | Msa1321390:intron | 40.0% | |
| GTCTAGACCACCAAATGTTT+GGG | - | chr8_4:26940020-26940039 | Msa1321390:intron | 40.0% | |
| TCATCATTGAACTTTGCAGG+TGG | + | chr8_4:26940183-26940202 | None:intergenic | 40.0% | |
| CCATCATCATTGAACTTTGC+AGG | + | chr8_4:26940186-26940205 | None:intergenic | 40.0% | |
| CCTGCAAAGTTCAATGATGA+TGG | - | chr8_4:26940183-26940202 | Msa1321390:intron | 40.0% | |
| GATGGCGATTTGATTGATGA+AGG | - | chr8_4:26940201-26940220 | Msa1321390:intron | 40.0% | |
| TGGCGATTTGATTGATGAAG+GGG | - | chr8_4:26940203-26940222 | Msa1321390:intron | 40.0% | |
| TTTGATTGATGAAGGGGCTA+AGG | - | chr8_4:26940209-26940228 | Msa1321390:intron | 40.0% | |
| CATTGCAGGCATTTACTCTA+AGG | - | chr8_4:26940256-26940275 | Msa1321390:CDS | 40.0% | |
| !! | GCATTTACTCTAAGGCTTCA+AGG | - | chr8_4:26940264-26940283 | Msa1321390:CDS | 40.0% |
| ATCAAAGTGGCAGCTCTTTC+TGG | - | chr8_4:26938904-26938923 | Msa1321390:three_prime_UTR | 45.0% | |
| CAAAAGAAGACGAACCAGCA+CGG | + | chr8_4:26938966-26938985 | None:intergenic | 45.0% | |
| CGAAAAGCTTCAACAAGAGG+TGG | + | chr8_4:26939171-26939190 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAG+AGG | + | chr8_4:26939174-26939193 | None:intergenic | 45.0% | |
| !! | TGATTCCTCTTGGTCTTGGT+AGG | - | chr8_4:26939430-26939449 | Msa1321390:CDS | 45.0% |
| ACTGAGGGATGTATCAACGT+GGG | + | chr8_4:26939464-26939483 | None:intergenic | 45.0% | |
| TACTGAGGGATGTATCAACG+TGG | + | chr8_4:26939465-26939484 | None:intergenic | 45.0% | |
| TGCGCTAAAGCTATCAGGTA+GGG | + | chr8_4:26939593-26939612 | None:intergenic | 45.0% | |
| ATGCGCTAAAGCTATCAGGT+AGG | + | chr8_4:26939594-26939613 | None:intergenic | 45.0% | |
| GCGCATGTTTAGTAATGCGT+TGG | - | chr8_4:26939608-26939627 | Msa1321390:intron | 45.0% | |
| CGTCTAGACCACCAAATGTT+TGG | - | chr8_4:26940019-26940038 | Msa1321390:intron | 45.0% | |
| !! | ATAAGCACTGGAGGAGACTT+TGG | - | chr8_4:26940063-26940082 | Msa1321390:intron | 45.0% |
| CACTATCATCTACGCCAAGT+TGG | - | chr8_4:26940099-26940118 | Msa1321390:intron | 45.0% | |
| ATCAAAGTGGCAGCTCTTTC+TGG | - | chr8_4:26938904-26938923 | Msa1321390:three_prime_UTR | 45.0% | |
| CAAAAGAAGACGAACCAGCA+CGG | + | chr8_4:26938966-26938985 | None:intergenic | 45.0% | |
| CGAAAAGCTTCAACAAGAGG+TGG | + | chr8_4:26939171-26939190 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAG+AGG | + | chr8_4:26939174-26939193 | None:intergenic | 45.0% | |
| !! | TGATTCCTCTTGGTCTTGGT+AGG | - | chr8_4:26939430-26939449 | Msa1321390:CDS | 45.0% |
| ACTGAGGGATGTATCAACGT+GGG | + | chr8_4:26939464-26939483 | None:intergenic | 45.0% | |
| TACTGAGGGATGTATCAACG+TGG | + | chr8_4:26939465-26939484 | None:intergenic | 45.0% | |
| TGCGCTAAAGCTATCAGGTA+GGG | + | chr8_4:26939593-26939612 | None:intergenic | 45.0% | |
| ATGCGCTAAAGCTATCAGGT+AGG | + | chr8_4:26939594-26939613 | None:intergenic | 45.0% | |
| GCGCATGTTTAGTAATGCGT+TGG | - | chr8_4:26939608-26939627 | Msa1321390:intron | 45.0% | |
| CGTCTAGACCACCAAATGTT+TGG | - | chr8_4:26940019-26940038 | Msa1321390:intron | 45.0% | |
| !! | ATAAGCACTGGAGGAGACTT+TGG | - | chr8_4:26940063-26940082 | Msa1321390:intron | 45.0% |
| CACTATCATCTACGCCAAGT+TGG | - | chr8_4:26940099-26940118 | Msa1321390:intron | 45.0% | |
| GGCAGAAGCAGTGATCAAAG+TGG | - | chr8_4:26938891-26938910 | Msa1321390:three_prime_UTR | 50.0% | |
| AAGACGAACCAGCACGGATA+AGG | + | chr8_4:26938960-26938979 | None:intergenic | 50.0% | |
| CTGAGGGATGTATCAACGTG+GGG | + | chr8_4:26939463-26939482 | None:intergenic | 50.0% | |
| AGACCACCAAATGTTTGGGC+TGG | - | chr8_4:26940024-26940043 | Msa1321390:intron | 50.0% | |
| TTGCCAGCCCAAACATTTGG+TGG | + | chr8_4:26940030-26940049 | None:intergenic | 50.0% | |
| GCTTTGCCAGCCCAAACATT+TGG | + | chr8_4:26940033-26940052 | None:intergenic | 50.0% | |
| GCAGCTGCAATCATAAGCAC+TGG | - | chr8_4:26940051-26940070 | Msa1321390:intron | 50.0% | |
| !! | GCTGCAATCATAAGCACTGG+AGG | - | chr8_4:26940054-26940073 | Msa1321390:intron | 50.0% |
| GGCAGAAGCAGTGATCAAAG+TGG | - | chr8_4:26938891-26938910 | Msa1321390:three_prime_UTR | 50.0% | |
| AAGACGAACCAGCACGGATA+AGG | + | chr8_4:26938960-26938979 | None:intergenic | 50.0% | |
| CTGAGGGATGTATCAACGTG+GGG | + | chr8_4:26939463-26939482 | None:intergenic | 50.0% | |
| AGACCACCAAATGTTTGGGC+TGG | - | chr8_4:26940024-26940043 | Msa1321390:intron | 50.0% | |
| TTGCCAGCCCAAACATTTGG+TGG | + | chr8_4:26940030-26940049 | None:intergenic | 50.0% | |
| GCTTTGCCAGCCCAAACATT+TGG | + | chr8_4:26940033-26940052 | None:intergenic | 50.0% | |
| GCAGCTGCAATCATAAGCAC+TGG | - | chr8_4:26940051-26940070 | Msa1321390:intron | 50.0% | |
| !! | GCTGCAATCATAAGCACTGG+AGG | - | chr8_4:26940054-26940073 | Msa1321390:intron | 50.0% |
| CAGCACGGATAAGGCCTGAA+TGG | + | chr8_4:26938951-26938970 | None:intergenic | 55.0% | |
| ! | CATTCAGGCCTTATCCGTGC+TGG | - | chr8_4:26938949-26938968 | Msa1321390:intron | 55.0% |
| GGTTGCCTACCAAGACCAAG+AGG | + | chr8_4:26939438-26939457 | None:intergenic | 55.0% | |
| GGGATGTATCAACGTGGGGA+GGG | + | chr8_4:26939459-26939478 | None:intergenic | 55.0% | |
| AGGGATGTATCAACGTGGGG+AGG | + | chr8_4:26939460-26939479 | None:intergenic | 55.0% | |
| ! | AGCACTGGAGGAGACTTTGG+CGG | - | chr8_4:26940066-26940085 | Msa1321390:intron | 55.0% |
| CAGCACGGATAAGGCCTGAA+TGG | + | chr8_4:26938951-26938970 | None:intergenic | 55.0% | |
| ! | CATTCAGGCCTTATCCGTGC+TGG | - | chr8_4:26938949-26938968 | Msa1321390:intron | 55.0% |
| GGTTGCCTACCAAGACCAAG+AGG | + | chr8_4:26939438-26939457 | None:intergenic | 55.0% | |
| GGGATGTATCAACGTGGGGA+GGG | + | chr8_4:26939459-26939478 | None:intergenic | 55.0% | |
| AGGGATGTATCAACGTGGGG+AGG | + | chr8_4:26939460-26939479 | None:intergenic | 55.0% | |
| ! | AGCACTGGAGGAGACTTTGG+CGG | - | chr8_4:26940066-26940085 | Msa1321390:intron | 55.0% |
| GCACTGGAGGAGACTTTGGC+GGG | - | chr8_4:26940067-26940086 | Msa1321390:intron | 60.0% | |
| CACTGGAGGAGACTTTGGCG+GGG | - | chr8_4:26940068-26940087 | Msa1321390:intron | 60.0% | |
| ACTGGAGGAGACTTTGGCGG+GGG | - | chr8_4:26940069-26940088 | Msa1321390:intron | 60.0% | |
| GCACTGGAGGAGACTTTGGC+GGG | - | chr8_4:26940067-26940086 | Msa1321390:intron | 60.0% | |
| CACTGGAGGAGACTTTGGCG+GGG | - | chr8_4:26940068-26940087 | Msa1321390:intron | 60.0% | |
| ACTGGAGGAGACTTTGGCGG+GGG | - | chr8_4:26940069-26940088 | Msa1321390:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 26938889 | 26940603 | 26938889 | ID=Msa1321390;Name=Msa1321390 |
| chr8_4 | mRNA | 26938889 | 26940603 | 26938889 | ID=Msa1321390-mRNA-1;Parent=Msa1321390;Name=Msa1321390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.66|1|0.5|0.33|3|205|223 |
| chr8_4 | exon | 26938889 | 26938943 | 26938889 | ID=Msa1321390-mRNA-1:exon:9180;Parent=Msa1321390-mRNA-1 |
| chr8_4 | exon | 26939046 | 26939500 | 26939046 | ID=Msa1321390-mRNA-1:exon:9179;Parent=Msa1321390-mRNA-1 |
| chr8_4 | exon | 26940237 | 26940603 | 26940237 | ID=Msa1321390-mRNA-1:exon:9178;Parent=Msa1321390-mRNA-1 |
| chr8_4 | CDS | 26940237 | 26940603 | 26940237 | ID=Msa1321390-mRNA-1:cds;Parent=Msa1321390-mRNA-1 |
| chr8_4 | CDS | 26939196 | 26939500 | 26939196 | ID=Msa1321390-mRNA-1:cds;Parent=Msa1321390-mRNA-1 |
| chr8_4 | three_prime_UTR | 26939046 | 26939195 | 26939046 | ID=Msa1321390-mRNA-1:three_prime_utr;Parent=Msa1321390-mRNA-1 |
| chr8_4 | three_prime_UTR | 26938889 | 26938943 | 26938889 | ID=Msa1321390-mRNA-1:three_prime_utr;Parent=Msa1321390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
