AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0665040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665040 MtrunA17_Chr4g0003121 68.750 384 13 5 1 278 1 383 2.36e-165 463
Msa0665040 MtrunA17_Chr8g0337611 40.476 126 70 4 99 224 161 281 5.63e-23 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665040 AT1G52510.1 59.223 309 71 4 16 269 15 323 1.41e-119 347
Msa0665040 AT1G52510.2 58.659 179 31 1 134 269 1 179 5.96e-66 206
Msa0665040 AT4G12830.1 41.935 124 67 4 100 223 121 239 6.37e-22 94.7

Find 78 sgRNAs with CRISPR-Local

Find 769 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCTTGATCTTTGCTTT+TGG 0.218919 4_4:+4361169 None:intergenic
AAATCATCATTCAACCCTTT+TGG 0.239268 4_4:-4361143 Msa0665040:CDS
AAATTCCTTTATGCTAATTA+AGG 0.265632 4_4:-4349634 Msa0665040:three_prime_UTR
CTTTCTAGGTTCCCTCTATA+TGG 0.296099 4_4:-4357539 Msa0665040:intron
TTCTAATAGACTTGGATGTT+TGG 0.300055 4_4:+4349655 None:intergenic
GATTCCTTCAAGGTCAGTTT+TGG 0.301670 4_4:+4349870 None:intergenic
GAAATAGATAATGGAATGTT+TGG 0.321859 4_4:+4349677 None:intergenic
TTAAAACAGTTGGCAGATAC+AGG 0.329464 4_4:-4358949 Msa0665040:intron
GGATTTCTTGTAGGTTCATA+TGG 0.332214 4_4:-4358463 Msa0665040:CDS
ATGGGAGATGAGCTTGTTAA+TGG 0.335320 4_4:+4358382 None:intergenic
AGATGGTTTGTGAGGGAAAC+TGG 0.336712 4_4:-4359271 Msa0665040:intron
CTCCTTAAGGGATTTCTTGT+AGG 0.338401 4_4:-4358472 Msa0665040:intron
GGATGTTTGGAAATAGATAA+TGG 0.339474 4_4:+4349668 None:intergenic
GCGCCTGACTGGATAGGATT+TGG 0.341818 4_4:-4358913 Msa0665040:CDS
TGCATTGGATAAACTGCTTC+AGG 0.359279 4_4:-4358747 Msa0665040:CDS
CAGAAGGATTTGCAACTAAC+AGG 0.371267 4_4:-4351051 Msa0665040:intron
GATAAACTGCTTCAGGTGTT+GGG 0.375461 4_4:-4358740 Msa0665040:CDS
CACAAACCATCTCAACTTCC+CGG 0.388212 4_4:+4359282 None:intergenic
ACAAGCTCATCTCCCATTCC+TGG 0.390715 4_4:-4358376 Msa0665040:CDS
TGAATGGCACTACGGCTTGA+TGG 0.396499 4_4:+4361104 None:intergenic
GACAAACCACAGCCAGGATA+TGG 0.405512 4_4:-4358883 Msa0665040:CDS
CAAGACAAGGGCAAGGATTA+CGG 0.410259 4_4:-4359319 Msa0665040:CDS
TACGGATCATATGTAAAATC+CGG 0.415232 4_4:-4359301 Msa0665040:CDS
TCCACTGCTTTGCGCCTGAC+TGG 0.416258 4_4:-4358924 Msa0665040:CDS
GGATAAACTGCTTCAGGTGT+TGG 0.424987 4_4:-4358741 Msa0665040:CDS
CTCAACCTTAATTAGCATAA+AGG 0.425950 4_4:+4349629 None:intergenic
GAAATAGCAAGGTTTAGTGT+TGG 0.443464 4_4:+4361299 None:intergenic
ACAACCAAAACTGACCTTGA+AGG 0.451699 4_4:-4349874 Msa0665040:three_prime_UTR
CTGGACTATTTCAGCAGCTA+AGG 0.459053 4_4:-4358357 Msa0665040:intron
AAAGCATCAACAACTTTCTC+AGG 0.462814 4_4:+4349918 None:intergenic
ACCTGAACAACTAGGTAAAA+CGG 0.462960 4_4:+4358707 None:intergenic
TTATCAGTAACAAATCCAAA+AGG 0.481278 4_4:+4361128 None:intergenic
CCAACATTGCCAGCTTCAGC+AGG 0.482936 4_4:+4361068 None:intergenic
CATTGAAATTCACCATATAG+AGG 0.484860 4_4:+4357527 None:intergenic
ATAAACTGCTTCAGGTGTTG+GGG 0.485560 4_4:-4358739 Msa0665040:CDS
TCTGAAAATCCTGCTGAAGC+TGG 0.491648 4_4:-4361077 Msa0665040:CDS
TGCTGAAATAGTCCAGGAAT+GGG 0.492694 4_4:+4358364 None:intergenic
TTAAAAGGAACAAACAACAT+AGG 0.495739 4_4:+4349772 None:intergenic
ATGTCCTTACTCAAATCAAA+AGG 0.497107 4_4:-4349846 Msa0665040:three_prime_UTR
CTGCTGAAATAGTCCAGGAA+TGG 0.505004 4_4:+4358363 None:intergenic
TGCTTTGCGCCTGACTGGAT+AGG 0.508011 4_4:-4358919 Msa0665040:CDS
GGAACAATTGTATTCCTTCA+CGG 0.510150 4_4:-4359130 Msa0665040:CDS
TAGGTTCATATGGACTGACC+TGG 0.515329 4_4:-4358453 Msa0665040:CDS
TAAGGACATGGATTCCTTCA+AGG 0.516983 4_4:+4349860 None:intergenic
ACTGAAAGTACCGTTGAAGT+TGG 0.517505 4_4:+4351081 None:intergenic
AAAGGAGTTCCACGATGCAT+TGG 0.518692 4_4:-4358762 Msa0665040:CDS
AAAGGAATTTCTAATAGACT+TGG 0.527009 4_4:+4349647 None:intergenic
TTAAAACCATATCCTGGCTG+TGG 0.528557 4_4:+4358877 None:intergenic
CTTTAGATACCTGAACAACT+AGG 0.528906 4_4:+4358699 None:intergenic
AAACCAAATCCTATCCAGTC+AGG 0.531111 4_4:+4358910 None:intergenic
GTGTAATTAAAACCATATCC+TGG 0.531320 4_4:+4358871 None:intergenic
TAGTAGTTGAAGAAATAGCA+AGG 0.535867 4_4:+4361288 None:intergenic
TCCAGTCAGGCGCAAAGCAG+TGG 0.540824 4_4:+4358923 None:intergenic
CTTAGCTGCTGAAATAGTCC+AGG 0.545953 4_4:+4358358 None:intergenic
TTCAGTGACAAACCACAGCC+AGG 0.548564 4_4:-4358889 Msa0665040:CDS
TATCAGTAACAAATCCAAAA+GGG 0.554155 4_4:+4361129 None:intergenic
CAGACAATTGAATGGCACTA+CGG 0.555154 4_4:+4361096 None:intergenic
TAAAATCCGGGAAGTTGAGA+TGG 0.557129 4_4:-4359288 Msa0665040:CDS
ACGGATCATATGTAAAATCC+GGG 0.563839 4_4:-4359300 Msa0665040:CDS
CTTCTAGAAAATACAAGACA+AGG 0.567374 4_4:-4359332 Msa0665040:intron
TTATGCTAATTAAGGTTGAG+AGG 0.568594 4_4:-4349626 Msa0665040:three_prime_UTR
ATTGCGTTGGCGCTCCGTGA+AGG 0.569256 4_4:+4359116 None:intergenic
GCAAGAAAAGCCAACTTCAA+CGG 0.586187 4_4:-4351091 Msa0665040:CDS
ACTTTCAGTGAAATAGCAGA+AGG 0.592480 4_4:-4351067 Msa0665040:CDS
TAAAACAGTTGGCAGATACA+GGG 0.594371 4_4:-4358948 Msa0665040:intron
CGGTAGCTAAAAGATTGCGT+TGG 0.596770 4_4:+4359103 None:intergenic
TCAAGCACAAGTTCATGCAG+AGG 0.601190 4_4:-4361239 Msa0665040:CDS
ATTGAAATTCACCATATAGA+GGG 0.601281 4_4:+4357528 None:intergenic
GGAAGTTGAGATGGTTTGTG+AGG 0.602667 4_4:-4359279 Msa0665040:CDS
GAAGTTGAGATGGTTTGTGA+GGG 0.604921 4_4:-4359278 Msa0665040:CDS
CTACCGAGTTGTCATGTCTG+AGG 0.607443 4_4:-4359086 Msa0665040:intron
AGGTTCATATGGACTGACCT+GGG 0.616385 4_4:-4358452 Msa0665040:CDS
GAAAATACAAGACAAGGGCA+AGG 0.626660 4_4:-4359326 Msa0665040:CDS
TAAACTGCTTCAGGTGTTGG+GGG 0.646226 4_4:-4358738 Msa0665040:CDS
GGATCAGCAAATAGCAGACG+AGG 0.672397 4_4:-4359151 Msa0665040:CDS
TTCTAGAAAATACAAGACAA+GGG 0.676445 4_4:-4359331 Msa0665040:intron
TAACCTCAGACATGACAACT+CGG 0.679836 4_4:+4359083 None:intergenic
GCAGTTTATCCAATGCATCG+TGG 0.708837 4_4:+4358753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTATAAGTTTGATTT+TGG - chr4_4:4350671-4350690 Msa0665040:intron 10.0%
!!! TTTTAGTTAAAATTAATTCT+GGG - chr4_4:4350864-4350883 Msa0665040:intron 10.0%
!! AATAAAATGAAATAAAATTG+TGG + chr4_4:4351898-4351917 None:intergenic 10.0%
!!! GATATTTATACTTTAAAATT+TGG - chr4_4:4360475-4360494 Msa0665040:intron 10.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr4_4:4350051-4350070 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr4_4:4350052-4350071 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr4_4:4350116-4350135 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr4_4:4350117-4350136 None:intergenic 15.0%
!! AAAATAGTTAATTGTATGTT+TGG + chr4_4:4350567-4350586 None:intergenic 15.0%
!! AAGGTAAAATAATTTATGTT+AGG - chr4_4:4350708-4350727 Msa0665040:intron 15.0%
!!! CTTTTAGTTAAAATTAATTC+TGG - chr4_4:4350863-4350882 Msa0665040:intron 15.0%
!!! AGTATAATTTGATTTATGTT+TGG - chr4_4:4352784-4352803 Msa0665040:intron 15.0%
!! ATTTGTAGAAGTAAAAATAA+GGG + chr4_4:4353185-4353204 None:intergenic 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr4_4:4354063-4354082 None:intergenic 15.0%
!! TTTAACTACTAAATTAGAAA+GGG + chr4_4:4354383-4354402 None:intergenic 15.0%
!!! TTTTAACTACTAAATTAGAA+AGG + chr4_4:4354384-4354403 None:intergenic 15.0%
!! TTCTAATTTAGTAGTTAAAA+AGG - chr4_4:4354384-4354403 Msa0665040:intron 15.0%
!! TCTAATTTAGTAGTTAAAAA+GGG - chr4_4:4354385-4354404 Msa0665040:intron 15.0%
!! TTATTATCATATGAAATTGA+TGG + chr4_4:4356652-4356671 None:intergenic 15.0%
!!! AGATTTATTTTTAAGCAAAA+TGG + chr4_4:4356860-4356879 None:intergenic 15.0%
!! AAATTTACATGAATAAACTA+TGG + chr4_4:4359743-4359762 None:intergenic 15.0%
!!! ATTTTTTGAATTGTTTAGTT+TGG + chr4_4:4359946-4359965 None:intergenic 15.0%
!! AACAATTCAAAAAATTTCTA+TGG - chr4_4:4359951-4359970 Msa0665040:intron 15.0%
!! ATATATTCCAAATTCTATTT+AGG + chr4_4:4360023-4360042 None:intergenic 15.0%
!!! ATACAATATACTACTTATTT+TGG - chr4_4:4360077-4360096 Msa0665040:intron 15.0%
!!! TTTATACTTTAAAATTTGGA+TGG - chr4_4:4360479-4360498 Msa0665040:intron 15.0%
!!! ACACTAAATTTACAATTTTA+AGG + chr4_4:4361142-4361161 None:intergenic 15.0%
!!! TTCCTTTTAAAAAATAAAAG+AGG - chr4_4:4361187-4361206 Msa0665040:intron 15.0%
!!! TTCCTCTTTTATTTTTTAAA+AGG + chr4_4:4361192-4361211 None:intergenic 15.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr4_4:4349982-4350001 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr4_4:4350092-4350111 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr4_4:4350115-4350134 None:intergenic 20.0%
!!! TAATGCTTTTAATTTTCCTT+AGG - chr4_4:4350185-4350204 Msa0665040:intron 20.0%
!!! AATGCTTTTAATTTTCCTTA+GGG - chr4_4:4350186-4350205 Msa0665040:intron 20.0%
!! CAAAATCAATTCAAATCATT+TGG + chr4_4:4350330-4350349 None:intergenic 20.0%
!!! TGAATTGATTTTGAAATGTT+CGG - chr4_4:4350337-4350356 Msa0665040:intron 20.0%
!!! TGATTTTATCAGTTTATGTT+TGG - chr4_4:4350749-4350768 Msa0665040:intron 20.0%
!! TGATCATATATGTTTATGTT+TGG + chr4_4:4350916-4350935 None:intergenic 20.0%
!!! ATACATGTATGGATAATTTT+TGG - chr4_4:4351010-4351029 Msa0665040:intron 20.0%
!! CAAAATCAAACTATTATCAT+AGG + chr4_4:4351077-4351096 None:intergenic 20.0%
!!! CTATGATAATAGTTTGATTT+TGG - chr4_4:4351075-4351094 Msa0665040:CDS 20.0%
!!! TTTAGTCTTCAAACAAATTT+TGG - chr4_4:4351148-4351167 Msa0665040:intron 20.0%
!! GTTATACAAAATCAGATAAA+AGG + chr4_4:4351536-4351555 None:intergenic 20.0%
!! TGAAATAAAATTGTGGTATT+AGG + chr4_4:4351891-4351910 None:intergenic 20.0%
!! TCTCAAAATTCTTATAGAAA+AGG - chr4_4:4352166-4352185 Msa0665040:intron 20.0%
!! TAATATTATCGTAAAAAAGC+TGG - chr4_4:4353111-4353130 Msa0665040:intron 20.0%
!! GATTTGTAGAAGTAAAAATA+AGG + chr4_4:4353186-4353205 None:intergenic 20.0%
!!! TTATGTTCTGAAAAATGAAA+AGG - chr4_4:4353709-4353728 Msa0665040:intron 20.0%
!! ATGATAATAAGATTGTTCAT+AGG - chr4_4:4353838-4353857 Msa0665040:intron 20.0%
!! TTAACTACTAAATTAGAAAG+GGG + chr4_4:4354382-4354401 None:intergenic 20.0%
!! CTAATTTAGTAGTTAAAAAG+GGG - chr4_4:4354386-4354405 Msa0665040:intron 20.0%
!!! GTAATACTTAATTTTACAAC+AGG + chr4_4:4354484-4354503 None:intergenic 20.0%
!! TAACTAACTAATAACAACAA+AGG + chr4_4:4354570-4354589 None:intergenic 20.0%
!!! AGGTTTAATTTTGTAAAATG+AGG + chr4_4:4356185-4356204 None:intergenic 20.0%
!!! AATTATTGCATTTTGATATC+TGG - chr4_4:4356755-4356774 Msa0665040:intron 20.0%
!!! ATTATTGCATTTTGATATCT+GGG - chr4_4:4356756-4356775 Msa0665040:intron 20.0%
!!! ATCAATGTTTTCAAAGTTTT+TGG - chr4_4:4357234-4357253 Msa0665040:intron 20.0%
!! TAACTAACTAATAACAACAA+AGG + chr4_4:4354570-4354589 None:intergenic 20.0%
!!! AACATTTTACCGTTAAAAAA+AGG + chr4_4:4360220-4360239 None:intergenic 20.0%
!! AAATTCCTTTATGCTAATTA+AGG - chr4_4:4361312-4361331 Msa0665040:CDS 20.0%
! TATCAGTAACAAATCCAAAA+GGG + chr4_4:4349820-4349839 None:intergenic 25.0%
! TTATCAGTAACAAATCCAAA+AGG + chr4_4:4349821-4349840 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr4_4:4349983-4350002 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr4_4:4350004-4350023 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr4_4:4350005-4350024 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr4_4:4350093-4350112 None:intergenic 25.0%
!!! AGTCTTGATAATAAGAGTTT+TGG - chr4_4:4350219-4350238 Msa0665040:intron 25.0%
! ATGATGAATTAGTGTATGTT+TGG - chr4_4:4350286-4350305 Msa0665040:intron 25.0%
!! AAGCTAAAAATTGATTCTAG+AGG + chr4_4:4350433-4350452 None:intergenic 25.0%
! CTAGATATCTTATACATGTA+TGG - chr4_4:4350999-4351018 Msa0665040:intron 25.0%
!!! TAGTTTGATTTTGGTCATAT+TGG - chr4_4:4351084-4351103 Msa0665040:CDS 25.0%
!! GTCTCATGTTATTCTTTTTA+AGG + chr4_4:4351113-4351132 None:intergenic 25.0%
!! TTTTCACAACTTACATTTTG+AGG + chr4_4:4351235-4351254 None:intergenic 25.0%
!!! TCAATTTCATAAGCTGTTTT+TGG - chr4_4:4351405-4351424 Msa0665040:intron 25.0%
!!! GATGATGTTTTTTGTTTAGT+TGG - chr4_4:4351562-4351581 Msa0665040:intron 25.0%
!! TTCTAGAAAATACAAGACAA+GGG - chr4_4:4351615-4351634 Msa0665040:intron 25.0%
! TTTGCTGAACATATGTTAAA+GGG + chr4_4:4351744-4351763 None:intergenic 25.0%
!! TTTTGCTGAACATATGTTAA+AGG + chr4_4:4351745-4351764 None:intergenic 25.0%
!!! TTTTTTTCTTTCCTTTTTGC+AGG - chr4_4:4351774-4351793 Msa0665040:intron 25.0%
! TAAAGTCTATGTTTGGATTA+TGG + chr4_4:4351931-4351950 None:intergenic 25.0%
!!! ATTTCTTTTTAAGGTCTGTT+TGG + chr4_4:4352385-4352404 None:intergenic 25.0%
! AAACAGACCTTAAAAAGAAA+TGG - chr4_4:4352384-4352403 Msa0665040:intron 25.0%
!! TATCTTGCTTGAATTTTTCA+AGG + chr4_4:4352520-4352539 None:intergenic 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr4_4:4352940-4352959 None:intergenic 25.0%
!! TTTGTCTTTTACAATATCCT+TGG + chr4_4:4353050-4353069 None:intergenic 25.0%
!! ACAAAAATCTCAAAAGTACA+TGG - chr4_4:4353065-4353084 Msa0665040:intron 25.0%
!! TTTTCTCAAATTCACGATTT+TGG - chr4_4:4353158-4353177 Msa0665040:intron 25.0%
! AGAATTGGTGAATTTATATG+AGG + chr4_4:4353213-4353232 None:intergenic 25.0%
! ATATAGAAAACACACAGAAT+TGG + chr4_4:4353228-4353247 None:intergenic 25.0%
! ATTGAAATTCACCATATAGA+GGG + chr4_4:4353421-4353440 None:intergenic 25.0%
! TTCAATGTAATCACATTTGT+TGG - chr4_4:4354088-4354107 Msa0665040:intron 25.0%
! TGATTGACAATAATAAGGTA+CGG - chr4_4:4354211-4354230 Msa0665040:intron 25.0%
!! ATACTTAATTTTACAACAGG+AGG + chr4_4:4354481-4354500 None:intergenic 25.0%
! AGAGTGATTACAACTTATAT+AGG + chr4_4:4354650-4354669 None:intergenic 25.0%
! TCATTTCTTCTCTCATAATA+TGG - chr4_4:4354712-4354731 Msa0665040:intron 25.0%
! TATTAGATAACTTTCTCCAT+TGG - chr4_4:4354735-4354754 Msa0665040:intron 25.0%
! ACAATTTCACCAAAGTTAAA+CGG - chr4_4:4355039-4355058 Msa0665040:intron 25.0%
!! CAAATTCTTCAATTTTTGAC+TGG - chr4_4:4355509-4355528 Msa0665040:intron 25.0%
!!! TAGAAAATTTGCTGGTAATA+AGG - chr4_4:4355700-4355719 Msa0665040:intron 25.0%
!!! AGAAAATTTGCTGGTAATAA+GGG - chr4_4:4355701-4355720 Msa0665040:intron 25.0%
!!! CTTTTGGTAACAAAATTCTA+TGG + chr4_4:4355795-4355814 None:intergenic 25.0%
! ATAATCAGAATCAGTTTGAA+TGG + chr4_4:4356107-4356126 None:intergenic 25.0%
!! TTCAAACTGATTCTGATTAT+TGG - chr4_4:4356107-4356126 Msa0665040:intron 25.0%
! ATGATATTCAATTTGAATGC+AGG + chr4_4:4356307-4356326 None:intergenic 25.0%
!!! ACATTGAAAGTTTTATCAGA+AGG + chr4_4:4356550-4356569 None:intergenic 25.0%
! TGAGAAGAACTAGAAATAAA+AGG + chr4_4:4356718-4356737 None:intergenic 25.0%
!!! TTATTGCATTTTGATATCTG+GGG - chr4_4:4356757-4356776 Msa0665040:intron 25.0%
!!! ATGATTTTAGCAGATTTGTT+TGG - chr4_4:4356833-4356852 Msa0665040:intron 25.0%
!! TTATCTGATCTAACAGTTTT+AGG + chr4_4:4356943-4356962 None:intergenic 25.0%
! AAAACTGTTAGATCAGATAA+TGG - chr4_4:4356943-4356962 Msa0665040:intron 25.0%
! AAATCAGGAATAAGAAATTC+AGG + chr4_4:4356970-4356989 None:intergenic 25.0%
!!! GAATCATATAGAAGTTGATA+AGG + chr4_4:4357204-4357223 None:intergenic 25.0%
!! ACTTTGAAAACATTGATATC+AGG + chr4_4:4357231-4357250 None:intergenic 25.0%
! TAAGAAAGAGAATCTGTAAT+GGG + chr4_4:4357711-4357730 None:intergenic 25.0%
! TAAATTTGATTGTTGGAACA+AGG - chr4_4:4357812-4357831 Msa0665040:intron 25.0%
! AAATTGGTCAAATCTCTTTA+TGG - chr4_4:4358209-4358228 Msa0665040:intron 25.0%
! GGTCAATTAAAATATTTCCT+TGG - chr4_4:4358458-4358477 Msa0665040:CDS 25.0%
! GATCTAAACAATATTTCCTT+TGG + chr4_4:4358523-4358542 None:intergenic 25.0%
! ACAATCAATTTCAAGATGTT+TGG + chr4_4:4359143-4359162 None:intergenic 25.0%
! TATTACAATGGTAATCACAT+AGG + chr4_4:4354608-4354627 None:intergenic 25.0%
! AGAGTGATTACAACTTATAT+AGG + chr4_4:4354650-4354669 None:intergenic 25.0%
! TTCTCTCATAATATTAAGCT+CGG - chr4_4:4359553-4359572 Msa0665040:intron 25.0%
!!! AGCAAAATTTAGTTTTACTC+AGG + chr4_4:4359777-4359796 None:intergenic 25.0%
!!! AAATTTTGCTGACTTAGAAT+TGG - chr4_4:4359787-4359806 Msa0665040:intron 25.0%
!! TCCTTAATTTGGAAATAGAA+AGG - chr4_4:4360122-4360141 Msa0665040:intron 25.0%
!! CCTTAATTTGGAAATAGAAA+GGG - chr4_4:4360123-4360142 Msa0665040:intron 25.0%
! AAATTGTCCATATCTTTACA+AGG - chr4_4:4360188-4360207 Msa0665040:intron 25.0%
!!! AGGATTAGACCTTTTTTTAA+CGG - chr4_4:4360208-4360227 Msa0665040:intron 25.0%
!! TAAGCAATATAACATTGACT+TGG + chr4_4:4360383-4360402 None:intergenic 25.0%
! AATAAGCTTAAAACAGCATA+TGG + chr4_4:4360589-4360608 None:intergenic 25.0%
! ATATAGTCTATCAGAGTTTA+TGG + chr4_4:4360613-4360632 None:intergenic 25.0%
!! AATTTAAGCTTGATGTTTTG+AGG + chr4_4:4360872-4360891 None:intergenic 25.0%
! ATCAAGCTTAAATTGATAGA+AGG - chr4_4:4360878-4360897 Msa0665040:intron 25.0%
!!! TAACCTTTGTATTTTTGAAC+AGG - chr4_4:4361005-4361024 Msa0665040:intron 25.0%
!!! ACAATTTTAAGGAAAAACTC+AGG + chr4_4:4361131-4361150 None:intergenic 25.0%
! TTAAAAGGAACAAACAACAT+AGG + chr4_4:4361177-4361196 None:intergenic 25.0%
!!! GAAATAGATAATGGAATGTT+TGG + chr4_4:4361272-4361291 None:intergenic 25.0%
! AAAGGAATTTCTAATAGACT+TGG + chr4_4:4361302-4361321 None:intergenic 25.0%
TAGTAGTTGAAGAAATAGCA+AGG + chr4_4:4349661-4349680 None:intergenic 30.0%
! ATCATCTTGATCTTTGCTTT+TGG + chr4_4:4349780-4349799 None:intergenic 30.0%
! AAATCATCATTCAACCCTTT+TGG - chr4_4:4349803-4349822 Msa0665040:three_prime_UTR 30.0%
! AGGATTTTCAGACAATTGAA+TGG + chr4_4:4349861-4349880 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr4_4:4350108-4350127 None:intergenic 30.0%
GGCTGTTTATAGATATGTTT+AGG - chr4_4:4350240-4350259 Msa0665040:intron 30.0%
!! AGTAGAATTGATTTTGTCTC+CGG - chr4_4:4350369-4350388 Msa0665040:intron 30.0%
CGATTGTTTACATGTAAAAG+TGG + chr4_4:4350473-4350492 None:intergenic 30.0%
GTTAGTGAGTTTAATGTCTA+AGG - chr4_4:4350623-4350642 Msa0665040:intron 30.0%
CAGTTTATGTTTGGATCATT+TGG - chr4_4:4350758-4350777 Msa0665040:intron 30.0%
GAGTCAATTCTCAAATTTGT+TGG + chr4_4:4350814-4350833 None:intergenic 30.0%
!! GTTAAAATTAATTCTGGGAC+TGG - chr4_4:4350869-4350888 Msa0665040:intron 30.0%
ATATCTCAGAATCTCATGTT+TGG + chr4_4:4350956-4350975 None:intergenic 30.0%
!! TTTGATTTTGGTCATATTGG+TGG - chr4_4:4351087-4351106 Msa0665040:CDS 30.0%
!!! TCTTCAAACAAATTTTGGCT+TGG - chr4_4:4351153-4351172 Msa0665040:intron 30.0%
GCTTATGAAATTGAACTATC+AGG + chr4_4:4351399-4351418 None:intergenic 30.0%
! AATCAGATAAAAGGTGCATT+TGG + chr4_4:4351527-4351546 None:intergenic 30.0%
! CTTCTAGAAAATACAAGACA+AGG - chr4_4:4351614-4351633 Msa0665040:intron 30.0%
TACGGATCATATGTAAAATC+CGG - chr4_4:4351645-4351664 Msa0665040:intron 30.0%
TTGCTGAACATATGTTAAAG+GGG + chr4_4:4351743-4351762 None:intergenic 30.0%
TACGAGTTAAAGTCTATGTT+TGG + chr4_4:4351938-4351957 None:intergenic 30.0%
GTGTAATTAAAACCATATCC+TGG + chr4_4:4352078-4352097 None:intergenic 30.0%
!!! GGATATGGTTTTAATTACAC+AGG - chr4_4:4352078-4352097 Msa0665040:intron 30.0%
! AGTGTAGCCATTTCTTTTTA+AGG + chr4_4:4352394-4352413 None:intergenic 30.0%
TATGATCACATTTCTCCTTA+AGG - chr4_4:4352461-4352480 Msa0665040:intron 30.0%
ATGATCACATTTCTCCTTAA+GGG - chr4_4:4352462-4352481 Msa0665040:intron 30.0%
CGTCTAGGAAACTATAATAT+AGG + chr4_4:4352666-4352685 None:intergenic 30.0%
! TTGATTTGAGTGTGTTGTAT+GGG - chr4_4:4352692-4352711 Msa0665040:intron 30.0%
!! TTGATTTGCAAAATTGATCC+CGG - chr4_4:4352748-4352767 Msa0665040:intron 30.0%
TATACTCAACTCACTTTAAC+CGG + chr4_4:4352770-4352789 None:intergenic 30.0%
TGGATACATTCATGTAAAAG+CGG - chr4_4:4352804-4352823 Msa0665040:intron 30.0%
TAACTAGAAGCTAGAATTTG+GGG + chr4_4:4352876-4352895 None:intergenic 30.0%
CTAACTAGAAGCTAGAATTT+GGG + chr4_4:4352877-4352896 None:intergenic 30.0%
TCTAACTAGAAGCTAGAATT+TGG + chr4_4:4352878-4352897 None:intergenic 30.0%
! AATTTTGTCTTTTGCAAGAG+TGG - chr4_4:4352970-4352989 Msa0665040:intron 30.0%
TAGTACTTATGCTTATCCAT+CGG + chr4_4:4353018-4353037 None:intergenic 30.0%
AAGTACTATGTTTACTACCA+AGG - chr4_4:4353030-4353049 Msa0665040:intron 30.0%
TCGTGAATTTGAGAAAATAG+AGG + chr4_4:4353155-4353174 None:intergenic 30.0%
ATGCAGCACATCATTTAATT+AGG + chr4_4:4353263-4353282 None:intergenic 30.0%
!! AAGAAACAAAAAGGCATCAT+AGG + chr4_4:4353390-4353409 None:intergenic 30.0%
!! ATGCCTTTTTGTTTCTTTCT+AGG - chr4_4:4353393-4353412 Msa0665040:intron 30.0%
GAACCTAGAAAGAAACAAAA+AGG + chr4_4:4353399-4353418 None:intergenic 30.0%
CATTGAAATTCACCATATAG+AGG + chr4_4:4353422-4353441 None:intergenic 30.0%
!!! AATGCAGTTTTGGATACATA+CGG + chr4_4:4353488-4353507 None:intergenic 30.0%
! ACAAAGATCAAATGCAGTTT+TGG + chr4_4:4353498-4353517 None:intergenic 30.0%
! CTTTACTCTAAAAGCAAGTT+TGG + chr4_4:4353598-4353617 None:intergenic 30.0%
ATGAAAAGGCTGATGTTTAT+CGG - chr4_4:4353723-4353742 Msa0665040:intron 30.0%
! TGTTTATCGGTTACCTTATT+TGG - chr4_4:4353736-4353755 Msa0665040:intron 30.0%
CCTTATTATTGTCAATCATG+AGG + chr4_4:4354209-4354228 None:intergenic 30.0%
CCTCATGATTGACAATAATA+AGG - chr4_4:4354206-4354225 Msa0665040:intron 30.0%
ATTTAGTAGTTAAAAAGGGG+TGG - chr4_4:4354389-4354408 Msa0665040:intron 30.0%
TTTAGTAGTTAAAAAGGGGT+GGG - chr4_4:4354390-4354409 Msa0665040:intron 30.0%
! AACTTATATAGGCATTGTGT+AGG + chr4_4:4354639-4354658 None:intergenic 30.0%
TAACTAACTTTCTCAACCAA+TGG + chr4_4:4354754-4354773 None:intergenic 30.0%
AGTTAGTTACGATTCAGTTA+CGG - chr4_4:4354765-4354784 Msa0665040:intron 30.0%
AAAGGAAGAATAAAGCTTCA+AGG + chr4_4:4354813-4354832 None:intergenic 30.0%
TAACTTTGGTGAAATTGTGA+GGG + chr4_4:4355037-4355056 None:intergenic 30.0%
TTAACTTTGGTGAAATTGTG+AGG + chr4_4:4355038-4355057 None:intergenic 30.0%
! TAATTGGAACCGTTTAACTT+TGG + chr4_4:4355051-4355070 None:intergenic 30.0%
! AATGAAAACAAGCTTGTTCT+TGG + chr4_4:4355112-4355131 None:intergenic 30.0%
!! AACAAGCTTGTTTTCATTGA+CGG - chr4_4:4355114-4355133 Msa0665040:intron 30.0%
TAAGACTCAGATATTACTCA+TGG - chr4_4:4355556-4355575 Msa0665040:intron 30.0%
! TCTGATTCTAGAAAATTTGC+TGG - chr4_4:4355692-4355711 Msa0665040:intron 30.0%
GTGATTATAACGATTGCAAA+AGG + chr4_4:4355771-4355790 None:intergenic 30.0%
! GAATTTTGTTACCAAAAGCA+TGG - chr4_4:4355797-4355816 Msa0665040:intron 30.0%
TTTGGAAGGTTAACATTAAC+AGG + chr4_4:4356205-4356224 None:intergenic 30.0%
GTTAATGTTAACCTTCCAAA+TGG - chr4_4:4356205-4356224 Msa0665040:intron 30.0%
ACATGGTTAAGATACAAGTT+TGG + chr4_4:4356274-4356293 None:intergenic 30.0%
ATGCAGGAGAATATAAAACA+TGG + chr4_4:4356291-4356310 None:intergenic 30.0%
TCATTCAGGATTTGAATACA+AGG - chr4_4:4356389-4356408 Msa0665040:intron 30.0%
TTGAATACAAGGAAGATGAT+TGG - chr4_4:4356400-4356419 Msa0665040:intron 30.0%
TATTGGAATGAAACAAGTGA+GGG + chr4_4:4356486-4356505 None:intergenic 30.0%
TTATTGGAATGAAACAAGTG+AGG + chr4_4:4356487-4356506 None:intergenic 30.0%
AAGAGTAGGAGAAACTTTAT+TGG + chr4_4:4356503-4356522 None:intergenic 30.0%
CTAGTTGAATTACAAAGAGT+AGG + chr4_4:4356517-4356536 None:intergenic 30.0%
! AAAAGGTAACCTTTTGTGTT+TGG + chr4_4:4356701-4356720 None:intergenic 30.0%
TATTTGTGATTGTGAACAGA+AGG + chr4_4:4356796-4356815 None:intergenic 30.0%
TAAAATCATCTACAATGGTG+AGG + chr4_4:4356822-4356841 None:intergenic 30.0%
TCTGCTAAAATCATCTACAA+TGG + chr4_4:4356827-4356846 None:intergenic 30.0%
TTGATGCAAAATACCTTTAG+AGG + chr4_4:4356998-4357017 None:intergenic 30.0%
AGGTTATGTAATAAAGGAGT+AGG + chr4_4:4357177-4357196 None:intergenic 30.0%
GGAGAAAGGTTATGTAATAA+AGG + chr4_4:4357183-4357202 None:intergenic 30.0%
!! ATAGAAGTTGATAAGGAGAA+AGG + chr4_4:4357197-4357216 None:intergenic 30.0%
! GCAAGAAAATGTGTTTTCTT+GGG - chr4_4:4357312-4357331 Msa0665040:intron 30.0%
AAGAGACATAAGGAATAATG+TGG + chr4_4:4357422-4357441 None:intergenic 30.0%
AAGATGATTGATTGGAAATC+TGG + chr4_4:4357662-4357681 None:intergenic 30.0%
AGTTGTAGAAGATGATTGAT+TGG + chr4_4:4357670-4357689 None:intergenic 30.0%
GTAAGAAAGAGAATCTGTAA+TGG + chr4_4:4357712-4357731 None:intergenic 30.0%
AGGCAAGTAAATTTGATTGT+TGG - chr4_4:4357805-4357824 Msa0665040:intron 30.0%
AAGATTAAACATCATGCAGA+TGG - chr4_4:4357933-4357952 Msa0665040:intron 30.0%
! TGAGAGATTTAAAGCAAGAT+TGG - chr4_4:4357962-4357981 Msa0665040:intron 30.0%
!! AATAAACCAATGATGGATAG+AGG + chr4_4:4358084-4358103 None:intergenic 30.0%
! GTTGATGAATAAACCAATGA+TGG + chr4_4:4358091-4358110 None:intergenic 30.0%
TTTCTTGTAATTCACCATGA+AGG + chr4_4:4358133-4358152 None:intergenic 30.0%
ACCTAATCAAGTTTGCAAAT+TGG - chr4_4:4358193-4358212 Msa0665040:intron 30.0%
ACCAATTTGCAAACTTGATT+AGG + chr4_4:4358197-4358216 None:intergenic 30.0%
! AGAAGTGGATTTGGTAAAAA+GGG + chr4_4:4358321-4358340 None:intergenic 30.0%
! TGATACTTTCACTCTTCTTT+TGG - chr4_4:4358340-4358359 Msa0665040:intron 30.0%
TATGTTTGTAAACTCAGACA+TGG + chr4_4:4358399-4358418 None:intergenic 30.0%
TCATTCAGAATCAAAGATCT+AGG - chr4_4:4358437-4358456 Msa0665040:CDS 30.0%
ATATTTCCTTGGTTTAGAAG+TGG - chr4_4:4358469-4358488 Msa0665040:intron 30.0%
! TTAGATCTTTTGCATGATTC+AGG - chr4_4:4358536-4358555 Msa0665040:intron 30.0%
TGAGTGATGAAAGTAATATC+AGG + chr4_4:4358698-4358717 None:intergenic 30.0%
AAATATCTTAAGAGTTCTCC+AGG - chr4_4:4358782-4358801 Msa0665040:intron 30.0%
GATACAAGAAGATCAATATC+TGG - chr4_4:4358881-4358900 Msa0665040:CDS 30.0%
ATATAAGACAGGCAACTTAA+TGG + chr4_4:4359065-4359084 None:intergenic 30.0%
TGATTGTCACAATATAAGAC+AGG + chr4_4:4359076-4359095 None:intergenic 30.0%
TCTTGAAATTGATTGTCACT+TGG - chr4_4:4359147-4359166 Msa0665040:CDS 30.0%
! TAAAAGAGTCTGAAATGGTT+GGG + chr4_4:4359263-4359282 None:intergenic 30.0%
! ATAAAAGAGTCTGAAATGGT+TGG + chr4_4:4359264-4359283 None:intergenic 30.0%
TTGGATAAAAGAGTCTGAAA+TGG + chr4_4:4359268-4359287 None:intergenic 30.0%
TAGGTGCACAATTATTACAA+TGG + chr4_4:4354620-4354639 None:intergenic 30.0%
! AACTTATATAGGCATTGTGT+AGG + chr4_4:4354639-4354658 None:intergenic 30.0%
!!! GTTTTTTCCTCTGTATTGTT+TGG + chr4_4:4359668-4359687 None:intergenic 30.0%
AATACAGAGGAAAAAACACT+TGG - chr4_4:4359671-4359690 Msa0665040:intron 30.0%
AATAATCAAGCTTCTGATGT+TGG - chr4_4:4359811-4359830 Msa0665040:intron 30.0%
ATAATCAAGCTTCTGATGTT+GGG - chr4_4:4359812-4359831 Msa0665040:intron 30.0%
!! TGAATTGTTTAGTTTGGTGA+AGG + chr4_4:4359940-4359959 None:intergenic 30.0%
CACTACACCTAAATAGAATT+TGG - chr4_4:4360013-4360032 Msa0665040:intron 30.0%
CCCTTTCTATTTCCAAATTA+AGG + chr4_4:4360126-4360145 None:intergenic 30.0%
GTCTAATCCTTGTAAAGATA+TGG + chr4_4:4360198-4360217 None:intergenic 30.0%
! AAATATGTTTCAGTTGATGC+AGG - chr4_4:4360402-4360421 Msa0665040:intron 30.0%
CAAGTACTTATGATAGTTCT+AGG + chr4_4:4360523-4360542 None:intergenic 30.0%
AGAACTATCATAAGTACTTG+TGG - chr4_4:4360523-4360542 Msa0665040:intron 30.0%
GAACTATCATAAGTACTTGT+GGG - chr4_4:4360524-4360543 Msa0665040:intron 30.0%
! TTTGTTCTTCTTGTTGTAGA+TGG - chr4_4:4360765-4360784 Msa0665040:intron 30.0%
! TTGTTCTTCTTGTTGTAGAT+GGG - chr4_4:4360766-4360785 Msa0665040:intron 30.0%
!!! TTTTGATTTGAGTAAGGACA+TGG + chr4_4:4361101-4361120 None:intergenic 30.0%
ATGTCCTTACTCAAATCAAA+AGG - chr4_4:4361100-4361119 Msa0665040:CDS 30.0%
!!! CTATCCTTTTGATTTGAGTA+AGG + chr4_4:4361107-4361126 None:intergenic 30.0%
GGATGTTTGGAAATAGATAA+TGG + chr4_4:4361281-4361300 None:intergenic 30.0%
TTCTAATAGACTTGGATGTT+TGG + chr4_4:4361294-4361313 None:intergenic 30.0%
CTCAACCTTAATTAGCATAA+AGG + chr4_4:4361320-4361339 None:intergenic 30.0%
TTATGCTAATTAAGGTTGAG+AGG - chr4_4:4361320-4361339 Msa0665040:CDS 30.0%
GAAATAGCAAGGTTTAGTGT+TGG + chr4_4:4349650-4349669 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr4_4:4349969-4349988 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr4_4:4350138-4350157 Msa0665040:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr4_4:4350151-4350170 Msa0665040:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr4_4:4350152-4350171 Msa0665040:intron 35.0%
AGACTCAAAAGAAATCCCTA+AGG + chr4_4:4350204-4350223 None:intergenic 35.0%
!! TGTATGTTTGGTTCTACTTC+CGG - chr4_4:4350298-4350317 Msa0665040:intron 35.0%
!! TTTCGAGTTAGCATCAATTC+CGG + chr4_4:4350391-4350410 None:intergenic 35.0%
! ACTATTTTGTGCAAGCAACA+TGG - chr4_4:4350579-4350598 Msa0665040:intron 35.0%
!! TTTGGCTGAAAGTTTGTTGA+AGG - chr4_4:4350689-4350708 Msa0665040:intron 35.0%
TCAGAATCTCATGTTTGGAT+TGG + chr4_4:4350951-4350970 None:intergenic 35.0%
AAGGCCTAAGTAAGAATAAG+AGG - chr4_4:4351189-4351208 Msa0665040:intron 35.0%
AGGTCCTCTTATTCTTACTT+AGG + chr4_4:4351196-4351215 None:intergenic 35.0%
GAGGTCACTAATCAAACAAA+AGG + chr4_4:4351216-4351235 None:intergenic 35.0%
AAAACAAAATGAGCCATGCA+TGG - chr4_4:4351251-4351270 Msa0665040:intron 35.0%
AAACAAAATGAGCCATGCAT+GGG - chr4_4:4351252-4351271 Msa0665040:intron 35.0%
TCTTTCAAACACTTAAGCAC+AGG + chr4_4:4351317-4351336 None:intergenic 35.0%
!!! CTGTTTTTGGCTCATACTTA+AGG - chr4_4:4351418-4351437 Msa0665040:intron 35.0%
TGCAACTGAAGAAGAAACTA+TGG + chr4_4:4351451-4351470 None:intergenic 35.0%
ACGGATCATATGTAAAATCC+GGG - chr4_4:4351646-4351665 Msa0665040:intron 35.0%
! TATTTGCTGATCCTGCAAAA+AGG + chr4_4:4351788-4351807 None:intergenic 35.0%
GGAACAATTGTATTCCTTCA+CGG - chr4_4:4351816-4351835 Msa0665040:intron 35.0%
TTTCTCCCTCTTAAAACAGT+TGG - chr4_4:4351987-4352006 Msa0665040:intron 35.0%
!!! ATCTGCCAACTGTTTTAAGA+GGG + chr4_4:4351995-4352014 None:intergenic 35.0%
!! TATCTGCCAACTGTTTTAAG+AGG + chr4_4:4351996-4352015 None:intergenic 35.0%
TTAAAACAGTTGGCAGATAC+AGG - chr4_4:4351997-4352016 Msa0665040:intron 35.0%
TAAAACAGTTGGCAGATACA+GGG - chr4_4:4351998-4352017 Msa0665040:intron 35.0%
ACCTGAACAACTAGGTAAAA+CGG + chr4_4:4352242-4352261 None:intergenic 35.0%
CTTTAGATACCTGAACAACT+AGG + chr4_4:4352250-4352269 None:intergenic 35.0%
AACCTACAAGAAATCCCTTA+AGG + chr4_4:4352479-4352498 None:intergenic 35.0%
GGATTTCTTGTAGGTTCATA+TGG - chr4_4:4352483-4352502 Msa0665040:intron 35.0%
AAGTTTAGACGTGCATTCAT+TGG + chr4_4:4352633-4352652 None:intergenic 35.0%
TCAAATCAAGAGATACGTCT+AGG + chr4_4:4352681-4352700 None:intergenic 35.0%
! CTTGATTTGAGTGTGTTGTA+TGG - chr4_4:4352691-4352710 Msa0665040:intron 35.0%
TGATTTGAGTGTGTTGTATG+GGG - chr4_4:4352693-4352712 Msa0665040:intron 35.0%
ATACTCAACTCACTTTAACC+GGG + chr4_4:4352769-4352788 None:intergenic 35.0%
GGATACATTCATGTAAAAGC+GGG - chr4_4:4352805-4352824 Msa0665040:intron 35.0%
! CTTCTAGTTAGAATCAATCG+TGG - chr4_4:4352886-4352905 Msa0665040:intron 35.0%
ACTTAATCACTTAAAGCCGA+TGG - chr4_4:4352999-4353018 Msa0665040:intron 35.0%
AGAATGCTATTATTGCTGAG+CGG - chr4_4:4353444-4353463 Msa0665040:intron 35.0%
!!! ATGCAGTTTTGGATACATAC+GGG + chr4_4:4353487-4353506 None:intergenic 35.0%
TTATGTCACTAACCAAATCC+AGG + chr4_4:4353773-4353792 None:intergenic 35.0%
CTTCCTTCTAGCATATACAT+AGG + chr4_4:4353865-4353884 None:intergenic 35.0%
! TGGAGGATAACCTAGTATTT+TGG - chr4_4:4353952-4353971 Msa0665040:intron 35.0%
! GGAGGATAACCTAGTATTTT+GGG - chr4_4:4353953-4353972 Msa0665040:intron 35.0%
TACACAGATCCCAAAATACT+AGG + chr4_4:4353965-4353984 None:intergenic 35.0%
ACACATTCGATCATAAGTGT+CGG - chr4_4:4354126-4354145 Msa0665040:intron 35.0%
ACAATAATAAGGTACGGAGA+GGG - chr4_4:4354217-4354236 Msa0665040:intron 35.0%
TTGCTCATACTTAAGTCACT+CGG + chr4_4:4354305-4354324 None:intergenic 35.0%
AGAAGCTTATCTTACCAAAC+CGG - chr4_4:4354350-4354369 Msa0665040:intron 35.0%
TTAGTAGTTAAAAAGGGGTG+GGG - chr4_4:4354391-4354410 Msa0665040:intron 35.0%
ACAAAGGAAGCTATCTAGTT+AGG + chr4_4:4354554-4354573 None:intergenic 35.0%
! TTTCTTGTGCTCTGTTTTCA+TGG - chr4_4:4354939-4354958 Msa0665040:intron 35.0%
GGTGAATCAGTATCAGAATT+GGG + chr4_4:4354982-4355001 None:intergenic 35.0%
TGGTGAATCAGTATCAGAAT+TGG + chr4_4:4354983-4355002 None:intergenic 35.0%
AGATCATTAGGATCAGGAAT+TGG + chr4_4:4355147-4355166 None:intergenic 35.0%
TTCTTGAGATTCGTTCTCTT+TGG - chr4_4:4355387-4355406 Msa0665040:intron 35.0%
TCTTGAGATTCGTTCTCTTT+GGG - chr4_4:4355388-4355407 Msa0665040:intron 35.0%
ACACAAGTGCAATTAGGTAT+AGG + chr4_4:4355434-4355453 None:intergenic 35.0%
TGATGAACACAAGTGCAATT+AGG + chr4_4:4355440-4355459 None:intergenic 35.0%
AATTTGATCCTCAACACGAT+AGG + chr4_4:4355495-4355514 None:intergenic 35.0%
! GAGTATACTCTGTTGATTGA+TGG + chr4_4:4355590-4355609 None:intergenic 35.0%
CAACAGAGTATACTCTTTAG+TGG - chr4_4:4355595-4355614 Msa0665040:intron 35.0%
AGTATACTCTTTAGTGGTTC+AGG - chr4_4:4355601-4355620 Msa0665040:intron 35.0%
CTTGATTCATCAAGAGAGAT+AGG + chr4_4:4355656-4355675 None:intergenic 35.0%
TTCTTGAGTCAAACTGAAAC+TGG + chr4_4:4355927-4355946 None:intergenic 35.0%
!! GATTATTGGCTCTTAGATTC+AGG - chr4_4:4356121-4356140 Msa0665040:intron 35.0%
! TACAAGGAAGATGATTGGTT+TGG - chr4_4:4356405-4356424 Msa0665040:intron 35.0%
!! ACAAGGAAGATGATTGGTTT+GGG - chr4_4:4356406-4356425 Msa0665040:intron 35.0%
ACTGAATGGCTTATACAGAT+TGG - chr4_4:4356435-4356454 Msa0665040:intron 35.0%
! AGCCATTTGGCATTTTAGAT+TGG - chr4_4:4356582-4356601 Msa0665040:intron 35.0%
! GCCATTTGGCATTTTAGATT+GGG - chr4_4:4356583-4356602 Msa0665040:intron 35.0%
! ACCCAATCTAAAATGCCAAA+TGG + chr4_4:4356587-4356606 None:intergenic 35.0%
! TGATGGATACAATGTTTGCA+TGG + chr4_4:4356635-4356654 None:intergenic 35.0%
! CCTTTAGAGGCATAAAAATC+AGG + chr4_4:4356985-4357004 None:intergenic 35.0%
! CCTGATTTTTATGCCTCTAA+AGG - chr4_4:4356982-4357001 Msa0665040:intron 35.0%
TTGAAACTCCCCAACAAAAT+GGG - chr4_4:4357028-4357047 Msa0665040:intron 35.0%
AGCTCTTAGGAAGTTTAGAT+TGG + chr4_4:4357107-4357126 None:intergenic 35.0%
! AGGAACTCTATTGATTAGGA+AGG + chr4_4:4357157-4357176 None:intergenic 35.0%
! GAGTAGGAACTCTATTGATT+AGG + chr4_4:4357161-4357180 None:intergenic 35.0%
TCTATGAGATTGAAGAGTAG+AGG + chr4_4:4357274-4357293 None:intergenic 35.0%
ATAGAACCAAACTTGACCTT+AGG - chr4_4:4357289-4357308 Msa0665040:intron 35.0%
TAGAACCAAACTTGACCTTA+GGG - chr4_4:4357290-4357309 Msa0665040:intron 35.0%
! AAACACATTTTCTTGCCCTA+AGG + chr4_4:4357308-4357327 None:intergenic 35.0%
! GGCAAGAAAATGTGTTTTCT+TGG - chr4_4:4357311-4357330 Msa0665040:intron 35.0%
! GTTTTCTTGGGTTATAAGTC+AGG - chr4_4:4357324-4357343 Msa0665040:intron 35.0%
GGTTATAAGTCAGGATACAA+AGG - chr4_4:4357333-4357352 Msa0665040:intron 35.0%
ATGGAAGAAGAAGATTGAGA+AGG + chr4_4:4357471-4357490 None:intergenic 35.0%
CAAACAAAATCCTTGAGATG+TGG + chr4_4:4357639-4357658 None:intergenic 35.0%
AAATTTACTTGCCTCAGCAT+AGG + chr4_4:4357799-4357818 None:intergenic 35.0%
AGGTAAATCAACAAGTTTCC+AGG + chr4_4:4357877-4357896 None:intergenic 35.0%
! AAAGCAAGATTGGTTGCTAA+AGG - chr4_4:4357972-4357991 Msa0665040:intron 35.0%
!! AAAGGATACACTCAAGTTGA+AGG - chr4_4:4357990-4358009 Msa0665040:intron 35.0%
!! ATACACTCAAGTTGAAGGTT+TGG - chr4_4:4357995-4358014 Msa0665040:intron 35.0%
AAAACTCACTACAGTCAGAT+TGG - chr4_4:4358046-4358065 Msa0665040:intron 35.0%
TTGTAATTCACCATGAAGGA+AGG + chr4_4:4358129-4358148 None:intergenic 35.0%
TAAAGCAAGCTAGCAGAAAA+TGG - chr4_4:4358234-4358253 Msa0665040:intron 35.0%
CTAGCAGAAAATGGTATGAA+AGG - chr4_4:4358243-4358262 Msa0665040:intron 35.0%
! ACTGCTTTATTACTAGCTCA+AGG - chr4_4:4358269-4358288 Msa0665040:intron 35.0%
AAAAAGGGAGTGATCTGAAT+TGG + chr4_4:4358306-4358325 None:intergenic 35.0%
! CAGAAGTGGATTTGGTAAAA+AGG + chr4_4:4358322-4358341 None:intergenic 35.0%
!! GAAAGTATCAGAAGTGGATT+TGG + chr4_4:4358330-4358349 None:intergenic 35.0%
!! AAGAGTGAAAGTATCAGAAG+TGG + chr4_4:4358336-4358355 None:intergenic 35.0%
! CACTCTTCTTTTGGTATATG+TGG - chr4_4:4358349-4358368 Msa0665040:intron 35.0%
GTGGATGATATTATTCTTGC+TGG - chr4_4:4358368-4358387 Msa0665040:CDS 35.0%
TCATTATGAAGCTTGACTGA+TGG + chr4_4:4358599-4358618 None:intergenic 35.0%
GAGGAAATGTCTTCATAAAG+AGG + chr4_4:4358629-4358648 None:intergenic 35.0%
AAGACATTTCCTCCTATAGA+AGG - chr4_4:4358636-4358655 Msa0665040:intron 35.0%
TCTACCAATCAACCTTCTAT+AGG + chr4_4:4358651-4358670 None:intergenic 35.0%
GAAAGTAATATCAGGTCTTG+TGG + chr4_4:4358690-4358709 None:intergenic 35.0%
GTACTTGTGTAGGTTTAGTA+AGG + chr4_4:4358736-4358755 None:intergenic 35.0%
ATTCAGAACTCCATCTTCTA+GGG - chr4_4:4358828-4358847 Msa0665040:intron 35.0%
! GTGGTTACTTTATTTGCTTC+AGG - chr4_4:4359024-4359043 Msa0665040:intron 35.0%
TAGTGAAGAAATCAGCAGTT+TGG + chr4_4:4359228-4359247 None:intergenic 35.0%
! AAAAGAGTCTGAAATGGTTG+GGG + chr4_4:4359262-4359281 None:intergenic 35.0%
! TCAGACTCTTTTATCCAAGT+TGG - chr4_4:4359270-4359289 Msa0665040:intron 35.0%
! CAGACTCTTTTATCCAAGTT+GGG - chr4_4:4359271-4359290 Msa0665040:intron 35.0%
ACAAAGGAAGCTATCTAGTT+AGG + chr4_4:4354554-4354573 None:intergenic 35.0%
ATAATATTAAGCTCGGCCAT+GGG - chr4_4:4359560-4359579 Msa0665040:intron 35.0%
GCCATGGGATTCTAATATTT+GGG - chr4_4:4359575-4359594 Msa0665040:intron 35.0%
TCCCAAATATTAGAATCCCA+TGG + chr4_4:4359579-4359598 None:intergenic 35.0%
ACTTTCAGTGAAATAGCAGA+AGG - chr4_4:4359879-4359898 Msa0665040:intron 35.0%
GAATTGATAAGCTGTGATAG+TGG - chr4_4:4359973-4359992 Msa0665040:intron 35.0%
CAACTCAAGCATCCTTAATT+TGG - chr4_4:4360111-4360130 Msa0665040:intron 35.0%
ATTTGGAAATAGAAAGGGCA+TGG - chr4_4:4360128-4360147 Msa0665040:intron 35.0%
!! AAACTGTTGACTTGGTTGTT+GGG + chr4_4:4360288-4360307 None:intergenic 35.0%
!! AAAACTGTTGACTTGGTTGT+TGG + chr4_4:4360289-4360308 None:intergenic 35.0%
! CTAGCAAAAAACTGTTGACT+TGG + chr4_4:4360296-4360315 None:intergenic 35.0%
ATTCGTATCGAGTACATCAT+AGG - chr4_4:4360316-4360335 Msa0665040:intron 35.0%
!! ATATAACATTGACTTGGTGC+TGG + chr4_4:4360377-4360396 None:intergenic 35.0%
!! ATAGTTCTAGGTTTCGATAC+TGG + chr4_4:4360511-4360530 None:intergenic 35.0%
! CTACGTGTTTTATCCAAACA+AGG - chr4_4:4360723-4360742 Msa0665040:intron 35.0%
!! CAAACAAGCCTTATTCAACT+GGG + chr4_4:4360749-4360768 None:intergenic 35.0%
!! ACAAACAAGCCTTATTCAAC+TGG + chr4_4:4360750-4360769 None:intergenic 35.0%
CTTAAATTGATAGAAGGAGC+TGG - chr4_4:4360884-4360903 Msa0665040:intron 35.0%
AGGCCTGTTCAAAAATACAA+AGG + chr4_4:4361011-4361030 None:intergenic 35.0%
! AAAGCATCAACAACTTTCTC+AGG + chr4_4:4361031-4361050 None:intergenic 35.0%
CAGACAATTGAATGGCACTA+CGG + chr4_4:4349853-4349872 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr4_4:4349968-4349987 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + chr4_4:4350154-4350173 None:intergenic 40.0%
TCAAATCATTTGGCCTACTC+CGG + chr4_4:4350320-4350339 None:intergenic 40.0%
ATGGCTGTGTGCATAGAATT+TGG - chr4_4:4350598-4350617 Msa0665040:intron 40.0%
TGGCTGTGTGCATAGAATTT+GGG - chr4_4:4350599-4350618 Msa0665040:intron 40.0%
!!! AAATTTTGGCTTGGCCATCT+AGG - chr4_4:4351162-4351181 Msa0665040:intron 40.0%
ACCTAAGGTGACTGTCTTAA+CGG - chr4_4:4351275-4351294 Msa0665040:intron 40.0%
GAAAATACAAGACAAGGGCA+AGG - chr4_4:4351620-4351639 Msa0665040:intron 40.0%
TAAAATCCGGGAAGTTGAGA+TGG - chr4_4:4351658-4351677 Msa0665040:intron 40.0%
! GAAGTTGAGATGGTTTGTGA+GGG - chr4_4:4351668-4351687 Msa0665040:intron 40.0%
TAACCTCAGACATGACAACT+CGG + chr4_4:4351866-4351885 None:intergenic 40.0%
AAACCAAATCCTATCCAGTC+AGG + chr4_4:4352039-4352058 None:intergenic 40.0%
TTAAAACCATATCCTGGCTG+TGG + chr4_4:4352072-4352091 None:intergenic 40.0%
TGCATTGGATAAACTGCTTC+AGG - chr4_4:4352199-4352218 Msa0665040:intron 40.0%
GATAAACTGCTTCAGGTGTT+GGG - chr4_4:4352206-4352225 Msa0665040:intron 40.0%
! ATAAACTGCTTCAGGTGTTG+GGG - chr4_4:4352207-4352226 Msa0665040:intron 40.0%
! TCCGTTTTACCTAGTTGTTC+AGG - chr4_4:4352238-4352257 Msa0665040:intron 40.0%
CTCCTTAAGGGATTTCTTGT+AGG - chr4_4:4352474-4352493 Msa0665040:intron 40.0%
!! ATGGGAGATGAGCTTGTTAA+TGG + chr4_4:4352567-4352586 None:intergenic 40.0%
TGCTGAAATAGTCCAGGAAT+GGG + chr4_4:4352585-4352604 None:intergenic 40.0%
GAATGCACGTCTAAACTTGA+TGG - chr4_4:4352635-4352654 Msa0665040:intron 40.0%
CTAGTTAGAATCAATCGTGG+AGG - chr4_4:4352889-4352908 Msa0665040:intron 40.0%
! AGCTGGCTTAAATCGAGTTA+TGG - chr4_4:4353128-4353147 Msa0665040:intron 40.0%
CTTTCTAGGTTCCCTCTATA+TGG - chr4_4:4353407-4353426 Msa0665040:intron 40.0%
GCTCAGCAATAATAGCATTC+TGG + chr4_4:4353445-4353464 None:intergenic 40.0%
! TTACCTTATTTGGCAAGCAG+TGG - chr4_4:4353746-4353765 Msa0665040:intron 40.0%
GGACCTATGTATATGCTAGA+AGG - chr4_4:4353859-4353878 Msa0665040:intron 40.0%
TACTAGGTTATCCTCCAACT+AGG + chr4_4:4353949-4353968 None:intergenic 40.0%
!! CATTTGTTGGTGTCACACAT+TGG - chr4_4:4354101-4354120 Msa0665040:intron 40.0%
! ACTTTATGCTCCCCTTTTCT+AGG - chr4_4:4354153-4354172 Msa0665040:intron 40.0%
! CTTTATGCTCCCCTTTTCTA+GGG - chr4_4:4354154-4354173 Msa0665040:intron 40.0%
ATCATGAGGAATATACGCTG+AGG + chr4_4:4354195-4354214 None:intergenic 40.0%
GACAATAATAAGGTACGGAG+AGG - chr4_4:4354216-4354235 Msa0665040:intron 40.0%
CAATAATAAGGTACGGAGAG+GGG - chr4_4:4354218-4354237 Msa0665040:intron 40.0%
ATGTATCTCTTCGTACGAGA+AGG - chr4_4:4354245-4354264 Msa0665040:intron 40.0%
GGTAAGATAAGCTTCTAACG+AGG + chr4_4:4354346-4354365 None:intergenic 40.0%
TACTAAATTAGAAAGGGGCG+AGG + chr4_4:4354377-4354396 None:intergenic 40.0%
TAGTAGTTAAAAAGGGGTGG+GGG - chr4_4:4354392-4354411 Msa0665040:intron 40.0%
GACTAGGTAAGCCATAATGA+GGG + chr4_4:4354427-4354446 None:intergenic 40.0%
CTTACCTAGTCGTCTATATC+AGG - chr4_4:4354436-4354455 Msa0665040:intron 40.0%
TTCACGAAGGAAGCAAAGAA+AGG + chr4_4:4354831-4354850 None:intergenic 40.0%
AAGAAAAACCAGCTTCACGA+AGG + chr4_4:4354844-4354863 None:intergenic 40.0%
AGCAATTGCGATAATACGCA+AGG + chr4_4:4354877-4354896 None:intergenic 40.0%
CAGAGCACAAGAAATCACAA+GGG + chr4_4:4354933-4354952 None:intergenic 40.0%
ACAGAGCACAAGAAATCACA+AGG + chr4_4:4354934-4354953 None:intergenic 40.0%
TCACTAGGATGAACGTAGTA+TGG + chr4_4:4355003-4355022 None:intergenic 40.0%
TACTACGTTCATCCTAGTGA+AGG - chr4_4:4355003-4355022 Msa0665040:intron 40.0%
GGTGAAATTGTGAGGGAATT+AGG + chr4_4:4355030-4355049 None:intergenic 40.0%
ACGGTTCCAATTATCTTGCA+TGG - chr4_4:4355058-4355077 Msa0665040:intron 40.0%
ACGACTCCATGCAAGATAAT+TGG + chr4_4:4355067-4355086 None:intergenic 40.0%
CAACTACGAGTGAGATCATT+AGG + chr4_4:4355159-4355178 None:intergenic 40.0%
GCAATCATCTCCTTCATTCA+TGG - chr4_4:4355190-4355209 Msa0665040:intron 40.0%
AGCTCAAGATCCATGAATGA+AGG + chr4_4:4355203-4355222 None:intergenic 40.0%
ACGCAGAAATAGCAGTATCA+TGG + chr4_4:4355260-4355279 None:intergenic 40.0%
!! ATGATACTGCTATTTCTGCG+TGG - chr4_4:4355259-4355278 Msa0665040:intron 40.0%
TCTGAAGGAAAGGTTTGCAA+AGG - chr4_4:4355287-4355306 Msa0665040:intron 40.0%
! GTTGTTAATGGTGGAACGTA+AGG + chr4_4:4355334-4355353 None:intergenic 40.0%
TTGCTTGAGGTTGTTAATGG+TGG + chr4_4:4355343-4355362 None:intergenic 40.0%
ACCATTAACAACCTCAAGCA+AGG - chr4_4:4355342-4355361 Msa0665040:intron 40.0%
ACCTTGCTTGAGGTTGTTAA+TGG + chr4_4:4355346-4355365 None:intergenic 40.0%
CCTCAAGCAAGGTAACAAAA+CGG - chr4_4:4355353-4355372 Msa0665040:intron 40.0%
! GCAAGGTAACAAAACGGTTT+TGG - chr4_4:4355359-4355378 Msa0665040:intron 40.0%
!! TCGTTCTCTTTGGGATGAAT+TGG - chr4_4:4355397-4355416 Msa0665040:intron 40.0%
GGGATGAATTGGATTCTCAT+AGG - chr4_4:4355408-4355427 Msa0665040:intron 40.0%
! CAAGACGAATAGAAGCACAA+CGG + chr4_4:4355466-4355485 None:intergenic 40.0%
ATCCTCAACACGATAGGATT+TGG + chr4_4:4355489-4355508 None:intergenic 40.0%
CTGAGTCTTAACAACAGAGA+AGG + chr4_4:4355546-4355565 None:intergenic 40.0%
! ACTCTGTTGATTGATGGAAG+AGG + chr4_4:4355584-4355603 None:intergenic 40.0%
TCATCAAGAGAGATAGGAGA+AGG + chr4_4:4355650-4355669 None:intergenic 40.0%
AATAAGGGCAAGACTGGTAA+TGG - chr4_4:4355716-4355735 Msa0665040:intron 40.0%
!! ACTGGTAATGGTGGTAACAA+AGG - chr4_4:4355728-4355747 Msa0665040:intron 40.0%
GTGGTAACAAAGGCAATACT+AGG - chr4_4:4355738-4355757 Msa0665040:intron 40.0%
! AACTAGGATGACCATGCTTT+TGG + chr4_4:4355811-4355830 None:intergenic 40.0%
TGGTCATCCTAGTTTCAACA+AGG - chr4_4:4355817-4355836 Msa0665040:intron 40.0%
GGTCATCCTAGTTTCAACAA+GGG - chr4_4:4355818-4355837 Msa0665040:intron 40.0%
GTTGATACCACATCAGAAGA+AGG + chr4_4:4355899-4355918 None:intergenic 40.0%
TCTTCTGATGTGGTATCAAC+AGG - chr4_4:4355899-4355918 Msa0665040:intron 40.0%
! GTGGTAACATGATTTGAGAC+AGG + chr4_4:4356019-4356038 None:intergenic 40.0%
! TCTGTGTTAGCTCATTTTGC+TGG - chr4_4:4356232-4356251 Msa0665040:intron 40.0%
CTGAATGACACAGCTATTAG+AGG + chr4_4:4356377-4356396 None:intergenic 40.0%
! CTCTAATAGCTGTGTCATTC+AGG - chr4_4:4356375-4356394 Msa0665040:intron 40.0%
GGTTTGGGTGAAAAACTGAA+TGG - chr4_4:4356421-4356440 Msa0665040:intron 40.0%
GAATGGCTTATACAGATTGG+TGG - chr4_4:4356438-4356457 Msa0665040:intron 40.0%
TAATTCCTGCTTCAGCCATT+TGG - chr4_4:4356569-4356588 Msa0665040:intron 40.0%
AAACCAATCTCTGATGAGAG+AGG + chr4_4:4356612-4356631 None:intergenic 40.0%
! GTCACTTTGCCAAACACAAA+AGG - chr4_4:4356689-4356708 Msa0665040:intron 40.0%
GTGATTGTGAACAGAAGGAA+TGG + chr4_4:4356791-4356810 None:intergenic 40.0%
GTTGAAACTCCCCAACAAAA+TGG - chr4_4:4357027-4357046 Msa0665040:intron 40.0%
! TCAACTCTCCCATTTTGTTG+GGG + chr4_4:4357039-4357058 None:intergenic 40.0%
! CTCAACTCTCCCATTTTGTT+GGG + chr4_4:4357040-4357059 None:intergenic 40.0%
! TCTCAACTCTCCCATTTTGT+TGG + chr4_4:4357041-4357060 None:intergenic 40.0%
CTAAACTTCCTAAGAGCTTC+TGG - chr4_4:4357109-4357128 Msa0665040:intron 40.0%
!! AGAAGGAAAGTACTCCCATT+GGG + chr4_4:4357454-4357473 None:intergenic 40.0%
!! AGCATCAGGAGAAGTATCAA+TGG + chr4_4:4357490-4357509 None:intergenic 40.0%
ATGAAAAGAGAAGGTGATGC+AGG + chr4_4:4357513-4357532 None:intergenic 40.0%
TTTCATTGACCCTCCTTCTT+TGG - chr4_4:4357527-4357546 Msa0665040:intron 40.0%
TTGAGCAGAAGGAGTAATGT+TGG + chr4_4:4357562-4357581 None:intergenic 40.0%
ACAAAATCCTTGAGATGTGG+TGG + chr4_4:4357636-4357655 None:intergenic 40.0%
TGGCTCAGTATGTGTTTGAA+GGG + chr4_4:4357772-4357791 None:intergenic 40.0%
TTGGCTCAGTATGTGTTTGA+AGG + chr4_4:4357773-4357792 None:intergenic 40.0%
!! CCAATTGGTTTGATGTTTGC+AGG + chr4_4:4357897-4357916 None:intergenic 40.0%
CCTGCAAACATCAAACCAAT+TGG - chr4_4:4357894-4357913 Msa0665040:intron 40.0%
TCAAACCAATTGGATGCAGA+TGG - chr4_4:4357904-4357923 Msa0665040:intron 40.0%
CAAACCAATTGGATGCAGAT+GGG - chr4_4:4357905-4357924 Msa0665040:intron 40.0%
! ACTGTAGTGAGTTTTGCAAC+AGG + chr4_4:4358041-4358060 None:intergenic 40.0%
! AGTCAGATTGGTGATTGCTT+TGG - chr4_4:4358058-4358077 Msa0665040:intron 40.0%
GTAAACAATGCCTTCCTTCA+TGG - chr4_4:4358116-4358135 Msa0665040:intron 40.0%
TCTGAATGAAGCATGCAAGA+TGG + chr4_4:4358426-4358445 None:intergenic 40.0%
AATGAGCCACTTCTAAACCA+AGG + chr4_4:4358478-4358497 None:intergenic 40.0%
! AGGGTATTTCTCTTTGCCAA+AGG - chr4_4:4358504-4358523 Msa0665040:intron 40.0%
! TCCTCCTATAGAAGGTTGAT+TGG - chr4_4:4358644-4358663 Msa0665040:intron 40.0%
ACCAATCAACCTTCTATAGG+AGG + chr4_4:4358648-4358667 None:intergenic 40.0%
! TATCAGGTCTTGTGGTATTG+AGG + chr4_4:4358682-4358701 None:intergenic 40.0%
GTGTAGGTTTAGTAAGGAAC+TGG + chr4_4:4358730-4358749 None:intergenic 40.0%
GCAGTGTAATGTACTTGTGT+AGG + chr4_4:4358746-4358765 None:intergenic 40.0%
!! GATGGAGTTCTGAATCTCTA+GGG + chr4_4:4358823-4358842 None:intergenic 40.0%
!! AGATGGAGTTCTGAATCTCT+AGG + chr4_4:4358824-4358843 None:intergenic 40.0%
GATTCAGAACTCCATCTTCT+AGG - chr4_4:4358827-4358846 Msa0665040:intron 40.0%
CATCAGAAAACCCTAGAAGA+TGG + chr4_4:4358841-4358860 None:intergenic 40.0%
! ACTTGCCTAAGAAGAAGCAT+TGG + chr4_4:4358907-4358926 None:intergenic 40.0%
!! TAGGCAAGTCACTGATTTCA+TGG - chr4_4:4358918-4358937 Msa0665040:CDS 40.0%
TTCCTCAGAGGCAGAATATA+GGG - chr4_4:4358973-4358992 Msa0665040:intron 40.0%
TAAGACAGGCAACTTAATGG+TGG + chr4_4:4359062-4359081 None:intergenic 40.0%
TGGTGCGTTCATGAAAAACT+GGG + chr4_4:4359123-4359142 None:intergenic 40.0%
TTGGTGCGTTCATGAAAAAC+TGG + chr4_4:4359124-4359143 None:intergenic 40.0%
!! TTTGGTCTTGAGAAGTGACT+GGG + chr4_4:4359210-4359229 None:intergenic 40.0%
!! TCTTTTATCCAAGTTGGGCA+TGG - chr4_4:4359276-4359295 Msa0665040:CDS 40.0%
ATTTACCATCCTCCAACTTG+TGG - chr4_4:4359304-4359323 Msa0665040:CDS 40.0%
TTTACCATCCTCCAACTTGT+GGG - chr4_4:4359305-4359324 Msa0665040:CDS 40.0%
CATAATATTAAGCTCGGCCA+TGG - chr4_4:4359559-4359578 Msa0665040:intron 40.0%
GGCCATGGGATTCTAATATT+TGG - chr4_4:4359574-4359593 Msa0665040:intron 40.0%
! TTGTTTGGTAGCAAGTCTCT+CGG + chr4_4:4359653-4359672 None:intergenic 40.0%
CTTGCTACCAAACAATACAG+AGG - chr4_4:4359658-4359677 Msa0665040:intron 40.0%
GCAAGAAAAGCCAACTTCAA+CGG - chr4_4:4359855-4359874 Msa0665040:intron 40.0%
!! ACTGAAAGTACCGTTGAAGT+TGG + chr4_4:4359868-4359887 None:intergenic 40.0%
CAGAAGGATTTGCAACTAAC+AGG - chr4_4:4359895-4359914 Msa0665040:intron 40.0%
! TAGAAAGGGCATGGTGAAAT+TGG - chr4_4:4360137-4360156 Msa0665040:intron 40.0%
! AGAAAGGGCATGGTGAAATT+GGG - chr4_4:4360138-4360157 Msa0665040:intron 40.0%
! CCTACAACTTGTTCTGAGTT+AGG + chr4_4:4360164-4360183 None:intergenic 40.0%
CCTAACTCAGAACAAGTTGT+AGG - chr4_4:4360161-4360180 Msa0665040:intron 40.0%
CGGTAAAATGTTAGTGCTGT+CGG - chr4_4:4360228-4360247 Msa0665040:intron 40.0%
TCGGTATTATGCTGAGTGTA+GGG - chr4_4:4360247-4360266 Msa0665040:intron 40.0%
!! AACTGTTGACTTGGTTGTTG+GGG + chr4_4:4360287-4360306 None:intergenic 40.0%
TACTTCTGACCAAGAAGCTT+GGG - chr4_4:4360348-4360367 Msa0665040:intron 40.0%
AAAGTCTCTTGAACCTGAAG+TGG - chr4_4:4360440-4360459 Msa0665040:intron 40.0%
TTGAACCTGAAGTGGTAAAC+TGG - chr4_4:4360448-4360467 Msa0665040:intron 40.0%
CAAAACCAGTTTACCACTTC+AGG + chr4_4:4360456-4360475 None:intergenic 40.0%
GGCAAAGGCTTATCGTATAA+GGG + chr4_4:4360691-4360710 None:intergenic 40.0%
TGGCAAAGGCTTATCGTATA+AGG + chr4_4:4360692-4360711 None:intergenic 40.0%
TAGTTGAGCAGTTATGGCAA+AGG + chr4_4:4360706-4360725 None:intergenic 40.0%
AACACGTAGTTGAGCAGTTA+TGG + chr4_4:4360712-4360731 None:intergenic 40.0%
!! TTATTCAACTGGGCCTTGTT+TGG + chr4_4:4360739-4360758 None:intergenic 40.0%
AAACAAGGCCCAGTTGAATA+AGG - chr4_4:4360738-4360757 Msa0665040:intron 40.0%
ATAAGCCGATAATGCTTGCT+TGG - chr4_4:4360789-4360808 Msa0665040:intron 40.0%
TAAGCCGATAATGCTTGCTT+GGG - chr4_4:4360790-4360809 Msa0665040:intron 40.0%
ATAGCAGAGGAGTTTCAGAA+AGG - chr4_4:4360842-4360861 Msa0665040:intron 40.0%
ACCAATCTTCTTGTGGCATA+TGG + chr4_4:4360910-4360929 None:intergenic 40.0%
TACTCTCACCAATCTTCTTG+TGG + chr4_4:4360917-4360936 None:intergenic 40.0%
ACAACCAAAACTGACCTTGA+AGG - chr4_4:4361072-4361091 Msa0665040:intron 40.0%
! GATTCCTTCAAGGTCAGTTT+TGG + chr4_4:4361079-4361098 None:intergenic 40.0%
TAAGGACATGGATTCCTTCA+AGG + chr4_4:4361089-4361108 None:intergenic 40.0%
TCAAGCACAAGTTCATGCAG+AGG - chr4_4:4349707-4349726 Msa0665040:three_prime_UTR 45.0%
TCTGAAAATCCTGCTGAAGC+TGG - chr4_4:4349869-4349888 Msa0665040:three_prime_UTR 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr4_4:4350156-4350175 Msa0665040:intron 45.0%
!! TTTGGTTCTACTTCCGGAGT+AGG - chr4_4:4350304-4350323 Msa0665040:intron 45.0%
! GAATTGACTCCATCGTATCG+TGG - chr4_4:4350824-4350843 Msa0665040:intron 45.0%
!! TTCTAGCTTCCACGATACGA+TGG + chr4_4:4350836-4350855 None:intergenic 45.0%
CTTAGGCCTTACTTCCTAGA+TGG + chr4_4:4351179-4351198 None:intergenic 45.0%
TCCGTTAAGACAGTCACCTT+AGG + chr4_4:4351279-4351298 None:intergenic 45.0%
CAAGACAAGGGCAAGGATTA+CGG - chr4_4:4351627-4351646 Msa0665040:intron 45.0%
CACAAACCATCTCAACTTCC+CGG + chr4_4:4351667-4351686 None:intergenic 45.0%
! GGAAGTTGAGATGGTTTGTG+AGG - chr4_4:4351667-4351686 Msa0665040:intron 45.0%
! AGATGGTTTGTGAGGGAAAC+TGG - chr4_4:4351675-4351694 Msa0665040:intron 45.0%
CGGTAGCTAAAAGATTGCGT+TGG + chr4_4:4351846-4351865 None:intergenic 45.0%
AAAGGAGTTCCACGATGCAT+TGG - chr4_4:4352184-4352203 Msa0665040:intron 45.0%
GCAGTTTATCCAATGCATCG+TGG + chr4_4:4352196-4352215 None:intergenic 45.0%
GGATAAACTGCTTCAGGTGT+TGG - chr4_4:4352205-4352224 Msa0665040:intron 45.0%
!! TAAACTGCTTCAGGTGTTGG+GGG - chr4_4:4352208-4352227 Msa0665040:intron 45.0%
! TAGGTTCATATGGACTGACC+TGG - chr4_4:4352493-4352512 Msa0665040:intron 45.0%
! AGGTTCATATGGACTGACCT+GGG - chr4_4:4352494-4352513 Msa0665040:intron 45.0%
!!! GCTTGAATTTTTCAAGGCCC+AGG + chr4_4:4352514-4352533 None:intergenic 45.0%
CTGCTGAAATAGTCCAGGAA+TGG + chr4_4:4352586-4352605 None:intergenic 45.0%
CTTAGCTGCTGAAATAGTCC+AGG + chr4_4:4352591-4352610 None:intergenic 45.0%
CTGGACTATTTCAGCAGCTA+AGG - chr4_4:4352589-4352608 Msa0665040:intron 45.0%
TTTCAGCAGCTAAGGTTAGC+TGG - chr4_4:4352597-4352616 Msa0665040:intron 45.0%
! GTGTGTTGTATGGGGTTTTG+TGG - chr4_4:4352701-4352720 Msa0665040:intron 45.0%
GCTGAGCGGTTTATTGAAAG+AGG - chr4_4:4353458-4353477 Msa0665040:intron 45.0%
TTGTCTGAAAACGCAAGTCC+AGG - chr4_4:4353894-4353913 Msa0665040:intron 45.0%
ATGCGATGTCCATGCTTCAT+AGG + chr4_4:4354029-4354048 None:intergenic 45.0%
CGACTAGGTAAGCCATAATG+AGG + chr4_4:4354428-4354447 None:intergenic 45.0%
AGCACCTGATATAGACGACT+AGG + chr4_4:4354443-4354462 None:intergenic 45.0%
TCAAGGTGAAGCTTCAATGG+CGG + chr4_4:4354796-4354815 None:intergenic 45.0%
GCTTCAAGGTGAAGCTTCAA+TGG + chr4_4:4354799-4354818 None:intergenic 45.0%
GAATTGGGAGAAACATTGCG+AGG + chr4_4:4354967-4354986 None:intergenic 45.0%
AGGGAATTAGGTCCTTCACT+AGG + chr4_4:4355018-4355037 None:intergenic 45.0%
CGAGTGAGATCATTAGGATC+AGG + chr4_4:4355153-4355172 None:intergenic 45.0%
ATGATCTCACTCGTAGTTGC+TGG - chr4_4:4355160-4355179 Msa0665040:intron 45.0%
TGATCTCACTCGTAGTTGCT+GGG - chr4_4:4355161-4355180 Msa0665040:intron 45.0%
!! CCGTTTTGTTACCTTGCTTG+AGG + chr4_4:4355356-4355375 None:intergenic 45.0%
TGCCAAATCCTATCGTGTTG+AGG - chr4_4:4355484-4355503 Msa0665040:intron 45.0%
CATCCTAGTTTCAACAAGGG+TGG - chr4_4:4355821-4355840 Msa0665040:intron 45.0%
GAACCACCCTTGTTGAAACT+AGG + chr4_4:4355827-4355846 None:intergenic 45.0%
AGCATTAGCCACTTGTGAAG+AGG + chr4_4:4355849-4355868 None:intergenic 45.0%
! ACCACATCAGAAGAAGGTGT+AGG + chr4_4:4355893-4355912 None:intergenic 45.0%
! TGATTTGAGACAGGTCCAGA+AGG + chr4_4:4356010-4356029 None:intergenic 45.0%
!! ACACAGAAGTGCCATTTGGA+AGG + chr4_4:4356219-4356238 None:intergenic 45.0%
!! GCTAACACAGAAGTGCCATT+TGG + chr4_4:4356223-4356242 None:intergenic 45.0%
AAATGCCAAATGGCTGAAGC+AGG + chr4_4:4356577-4356596 None:intergenic 45.0%
TCACCTCTCTCATCAGAGAT+TGG - chr4_4:4356606-4356625 Msa0665040:intron 45.0%
TGAACAGAAGGAATGGCAAG+AGG + chr4_4:4356784-4356803 None:intergenic 45.0%
TCTTGCCCTAAGGTCAAGTT+TGG + chr4_4:4357298-4357317 None:intergenic 45.0%
!! GAAGGAAAGTACTCCCATTG+GGG + chr4_4:4357453-4357472 None:intergenic 45.0%
!! GAGAAGGAAAGTACTCCCAT+TGG + chr4_4:4357455-4357474 None:intergenic 45.0%
GGAGGGTCAATGAAAAGAGA+AGG + chr4_4:4357522-4357541 None:intergenic 45.0%
AAGGAGGATCCAAAGAAGGA+GGG + chr4_4:4357539-4357558 None:intergenic 45.0%
TTGGAAGGAGGATCCAAAGA+AGG + chr4_4:4357543-4357562 None:intergenic 45.0%
GAAGGAGTAATGTTGGAAGG+AGG + chr4_4:4357555-4357574 None:intergenic 45.0%
GCAGAAGGAGTAATGTTGGA+AGG + chr4_4:4357558-4357577 None:intergenic 45.0%
! TTTCTGCTTCTGGAGGATCT+AGG + chr4_4:4357609-4357628 None:intergenic 45.0%
AAATCCACCACCACATCTCA+AGG - chr4_4:4357626-4357645 Msa0665040:intron 45.0%
AAATCCTTGAGATGTGGTGG+TGG + chr4_4:4357633-4357652 None:intergenic 45.0%
TGAGCCAAAATCCTATGCTG+AGG - chr4_4:4357785-4357804 Msa0665040:intron 45.0%
! CTTGCCTCAGCATAGGATTT+TGG + chr4_4:4357792-4357811 None:intergenic 45.0%
TGATTGTTGGAACAAGGCCA+TGG - chr4_4:4357818-4357837 Msa0665040:intron 45.0%
CTTGCTGCTCTTGAACATAC+TGG - chr4_4:4357849-4357868 Msa0665040:intron 45.0%
CTCTTGAACATACTGGTACC+TGG - chr4_4:4357856-4357875 Msa0665040:intron 45.0%
TACACCCATCTGCATCCAAT+TGG + chr4_4:4357912-4357931 None:intergenic 45.0%
CTTTGGCCTCTATCCATCAT+TGG - chr4_4:4358075-4358094 Msa0665040:intron 45.0%
GTTTACATGCAGTTACCTCC+AGG - chr4_4:4358155-4358174 Msa0665040:intron 45.0%
! TTAGAAGCTTTGACTCCTGG+AGG + chr4_4:4358173-4358192 None:intergenic 45.0%
! GGTTTAGAAGCTTTGACTCC+TGG + chr4_4:4358176-4358195 None:intergenic 45.0%
! AGCTTGACTGATGGATCAGA+AGG + chr4_4:4358590-4358609 None:intergenic 45.0%
CTTAAGAGTTCTCCAGGCAA+AGG - chr4_4:4358788-4358807 Msa0665040:intron 45.0%
! TAGGGTTTTCTGATGCTGAC+TGG - chr4_4:4358846-4358865 Msa0665040:intron 45.0%
!! AGGGTTTTCTGATGCTGACT+GGG - chr4_4:4358847-4358866 Msa0665040:intron 45.0%
TCTGGCCAATGCTTCTTCTT+AGG - chr4_4:4358899-4358918 Msa0665040:CDS 45.0%
CTTCCTCAGAGGCAGAATAT+AGG - chr4_4:4358972-4358991 Msa0665040:intron 45.0%
AAGTAACCACTGAAGCTCAC+AGG + chr4_4:4359014-4359033 None:intergenic 45.0%
CTTGGTTAGAGACAAGCTTC+AGG - chr4_4:4359165-4359184 Msa0665040:intron 45.0%
!! GTTTGGTCTTGAGAAGTGAC+TGG + chr4_4:4359211-4359230 None:intergenic 45.0%
AATGTCAACCATGCCCAACT+TGG + chr4_4:4359287-4359306 None:intergenic 45.0%
TTACCATCCTCCAACTTGTG+GGG - chr4_4:4359306-4359325 Msa0665040:CDS 45.0%
TGTAATATCCCCCCACAAGT+TGG + chr4_4:4359319-4359338 None:intergenic 45.0%
!! AGCTGTGATAGTGGTAGAGA+AGG - chr4_4:4359982-4360001 Msa0665040:intron 45.0%
! GATAGTGGTAGAGAAGGCTA+AGG - chr4_4:4359988-4360007 Msa0665040:intron 45.0%
GTCGGTATTATGCTGAGTGT+AGG - chr4_4:4360246-4360265 Msa0665040:intron 45.0%
CAAGCTTCTTGGTCAGAAGT+AGG + chr4_4:4360349-4360368 None:intergenic 45.0%
CTACTTCTGACCAAGAAGCT+TGG - chr4_4:4360347-4360366 Msa0665040:intron 45.0%
AAGCCGATAATGCTTGCTTG+GGG - chr4_4:4360791-4360810 Msa0665040:intron 45.0%
AACTCCTCTGCTATAGACTG+TGG + chr4_4:4360836-4360855 None:intergenic 45.0%
GCCATATGCCACAAGAAGAT+TGG - chr4_4:4360906-4360925 Msa0665040:intron 45.0%
TGAATGGCACTACGGCTTGA+TGG + chr4_4:4349845-4349864 None:intergenic 50.0%
ATCTTATACTCCCTCCGTCC+CGG - chr4_4:4349947-4349966 Msa0665040:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr4_4:4349964-4349983 None:intergenic 50.0%
AAGCATTACTACCTCCGTCC+CGG + chr4_4:4350173-4350192 None:intergenic 50.0%
GCTTGGCCATCTAGGAAGTA+AGG - chr4_4:4351170-4351189 Msa0665040:intron 50.0%
GGATCAGCAAATAGCAGACG+AGG - chr4_4:4351795-4351814 Msa0665040:intron 50.0%
CTACCGAGTTGTCATGTCTG+AGG - chr4_4:4351860-4351879 Msa0665040:intron 50.0%
TTCAGTGACAAACCACAGCC+AGG - chr4_4:4352057-4352076 Msa0665040:intron 50.0%
GACAAACCACAGCCAGGATA+TGG - chr4_4:4352063-4352082 Msa0665040:intron 50.0%
CGCTTGTCAATAAGTGCTCG+TGG + chr4_4:4352329-4352348 None:intergenic 50.0%
ACAAGCTCATCTCCCATTCC+TGG - chr4_4:4352570-4352589 Msa0665040:intron 50.0%
GGTCCACTGCTTGCCAAATA+AGG + chr4_4:4353752-4353771 None:intergenic 50.0%
TATTTGGCAAGCAGTGGACC+TGG - chr4_4:4353752-4353771 Msa0665040:intron 50.0%
CGATGTCCATGCTTCATAGG+CGG + chr4_4:4354026-4354045 None:intergenic 50.0%
!!! ATGCTCCCCTTTTCTAGGGT+TGG - chr4_4:4354158-4354177 Msa0665040:intron 50.0%
!!! TGCTCCCCTTTTCTAGGGTT+GGG - chr4_4:4354159-4354178 Msa0665040:intron 50.0%
TCACGCCCAACCCTAGAAAA+GGG + chr4_4:4354167-4354186 None:intergenic 50.0%
TTCACGCCCAACCCTAGAAA+AGG + chr4_4:4354168-4354187 None:intergenic 50.0%
ACGAGGTGACTCGTTCACTT+GGG + chr4_4:4354329-4354348 None:intergenic 50.0%
AACGAGGTGACTCGTTCACT+TGG + chr4_4:4354330-4354349 None:intergenic 50.0%
AATTAGAAAGGGGCGAGGAC+CGG + chr4_4:4354372-4354391 None:intergenic 50.0%
TAGTTAAAAAGGGGTGGGGG+CGG - chr4_4:4354395-4354414 Msa0665040:intron 50.0%
CTTTGCTTCCTTCGTGAAGC+TGG - chr4_4:4354833-4354852 Msa0665040:intron 50.0%
TTCTGCGTGGCTTGATCTGA+AGG - chr4_4:4355272-4355291 Msa0665040:intron 50.0%
CGTGGCTTGATCTGAAGGAA+AGG - chr4_4:4355277-4355296 Msa0665040:intron 50.0%
GCTGGTAATAAGGGCAAGAC+TGG - chr4_4:4355710-4355729 Msa0665040:intron 50.0%
!! AAGGGCAAGACTGGTAATGG+TGG - chr4_4:4355719-4355738 Msa0665040:intron 50.0%
GCCTACACCTTCTTCTGATG+TGG - chr4_4:4355889-4355908 Msa0665040:intron 50.0%
! TTTGAGACAGGTCCAGAAGG+AGG + chr4_4:4356007-4356026 None:intergenic 50.0%
CATGTTACCACTGCTTCTCC+AGG - chr4_4:4356028-4356047 Msa0665040:intron 50.0%
TGAATGACCTGGAGAAGCAG+TGG + chr4_4:4356038-4356057 None:intergenic 50.0%
GCTTCTCCAGGTCATTCATC+TGG - chr4_4:4356040-4356059 Msa0665040:intron 50.0%
GCAACACCAGATGAATGACC+TGG + chr4_4:4356049-4356068 None:intergenic 50.0%
!! TCTGGTGTTGCTTCTCAGAC+AGG - chr4_4:4356058-4356077 Msa0665040:intron 50.0%
GCATAGCACCAGAAGCTCTT+AGG + chr4_4:4357120-4357139 None:intergenic 50.0%
GGAGCATGGGAAGAGACATA+AGG + chr4_4:4357432-4357451 None:intergenic 50.0%
GAAGGAGGATCCAAAGAAGG+AGG + chr4_4:4357540-4357559 None:intergenic 50.0%
GGAGTAGGAGATTGAGCAGA+AGG + chr4_4:4357573-4357592 None:intergenic 50.0%
!! TGGTGGATTTCTGCTTCTGG+AGG + chr4_4:4357616-4357635 None:intergenic 50.0%
!! TGGTGGTGGATTTCTGCTTC+TGG + chr4_4:4357619-4357638 None:intergenic 50.0%
AGAAGTGGCTCATTCACAGC+AGG - chr4_4:4358484-4358503 Msa0665040:intron 50.0%
GAAGTGGCTCATTCACAGCA+GGG - chr4_4:4358485-4358504 Msa0665040:intron 50.0%
!! GGATCAGAAGGTGTTGAGAC+AGG + chr4_4:4358578-4358597 None:intergenic 50.0%
GGGAAAAACAAGCCTTTGCC+TGG + chr4_4:4358803-4358822 None:intergenic 50.0%
!! TTTTCTGATGCTGACTGGGC+AGG - chr4_4:4358851-4358870 Msa0665040:intron 50.0%
! TTTCTGATGCTGACTGGGCA+GGG - chr4_4:4358852-4358871 Msa0665040:intron 50.0%
AGAAGCAGCTCACTGTCTCT+AGG - chr4_4:4358948-4358967 Msa0665040:intron 50.0%
TGTCTCTAGGTCTTCCTCAG+AGG - chr4_4:4358961-4358980 Msa0665040:intron 50.0%
TGCCCTATATTCTGCCTCTG+AGG + chr4_4:4358978-4358997 None:intergenic 50.0%
GTTAGAGACAAGCTTCAGGC+AGG - chr4_4:4359169-4359188 Msa0665040:intron 50.0%
CTGAAATGGTTGGGGAAGCA+AGG + chr4_4:4359254-4359273 None:intergenic 50.0%
TACCATCCTCCAACTTGTGG+GGG - chr4_4:4359307-4359326 Msa0665040:CDS 50.0%
! AATATCCCCCCACAAGTTGG+AGG + chr4_4:4359316-4359335 None:intergenic 50.0%
TTGAGGCTCAGGGACTGTTT+CGG + chr4_4:4359602-4359621 None:intergenic 50.0%
!!! TGAGAGTGCCTTCGCCTTTT+AGG + chr4_4:4359626-4359645 None:intergenic 50.0%
!! AAAGGCGAAGGCACTCTCAT+TGG - chr4_4:4359627-4359646 Msa0665040:intron 50.0%
!! TGTTGACTTGGTTGTTGGGG+TGG + chr4_4:4360284-4360303 None:intergenic 50.0%
!! TGCTGGTTTCCCAAGCTTCT+TGG + chr4_4:4360360-4360379 None:intergenic 50.0%
AGCCGATAATGCTTGCTTGG+GGG - chr4_4:4360792-4360811 Msa0665040:intron 50.0%
AGCCCCCAAGCAAGCATTAT+CGG + chr4_4:4360797-4360816 None:intergenic 50.0%
CTTGCCACAGTCTATAGCAG+AGG - chr4_4:4360829-4360848 Msa0665040:intron 50.0%
CCAACATTGCCAGCTTCAGC+AGG + chr4_4:4349881-4349900 None:intergenic 55.0%
CCTGCTGAAGCTGGCAATGT+TGG - chr4_4:4349878-4349897 Msa0665040:three_prime_UTR 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr4_4:4349960-4349979 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr4_4:4350159-4350178 Msa0665040:intron 55.0%
TGAGCCATGCATGGGACCTA+AGG - chr4_4:4351260-4351279 Msa0665040:intron 55.0%
GTCACCTTAGGTCCCATGCA+TGG + chr4_4:4351267-4351286 None:intergenic 55.0%
TGCTTTGCGCCTGACTGGAT+AGG - chr4_4:4352027-4352046 Msa0665040:intron 55.0%
GCGCCTGACTGGATAGGATT+TGG - chr4_4:4352033-4352052 Msa0665040:intron 55.0%
GCAAGCAGTGGACCTGGATT+TGG - chr4_4:4353758-4353777 Msa0665040:intron 55.0%
CAGGTCACCGTCTCCATTCA+GGG - chr4_4:4353913-4353932 Msa0665040:intron 55.0%
CCACTGACCCTGAATGGAGA+CGG + chr4_4:4353923-4353942 None:intergenic 55.0%
AGGTCACCACTGACCCTGAA+TGG + chr4_4:4353929-4353948 None:intergenic 55.0%
AGGGTCAGTGGTGACCTAGT+TGG - chr4_4:4353932-4353951 Msa0665040:intron 55.0%
GTCAGTGGTGACCTAGTTGG+AGG - chr4_4:4353935-4353954 Msa0665040:intron 55.0%
ACGCATCCGCCTATGAAGCA+TGG - chr4_4:4354017-4354036 Msa0665040:intron 55.0%
CACGCCCAACCCTAGAAAAG+GGG + chr4_4:4354166-4354185 None:intergenic 55.0%
GGCGGTTGCTTCCCTCATTA+TGG - chr4_4:4354413-4354432 Msa0665040:intron 55.0%
TCGTTCCATGCAGCGTGCTT+TGG - chr4_4:4355083-4355102 Msa0665040:intron 55.0%
CGTTCCATGCAGCGTGCTTT+GGG - chr4_4:4355084-4355103 Msa0665040:intron 55.0%
GTTCCATGCAGCGTGCTTTG+GGG - chr4_4:4355085-4355104 Msa0665040:intron 55.0%
TTCCATGCAGCGTGCTTTGG+GGG - chr4_4:4355086-4355105 Msa0665040:intron 55.0%
GGGTGGTTCCTCTTCACAAG+TGG - chr4_4:4355838-4355857 Msa0665040:intron 55.0%
TCTCTTCCCATGCTCCCCAA+TGG - chr4_4:4357436-4357455 Msa0665040:intron 55.0%
CTCTTCCCATGCTCCCCAAT+GGG - chr4_4:4357437-4357456 Msa0665040:intron 55.0%
! GTACTCCCATTGGGGAGCAT+GGG + chr4_4:4357445-4357464 None:intergenic 55.0%
AGTACTCCCATTGGGGAGCA+TGG + chr4_4:4357446-4357465 None:intergenic 55.0%
!! GAAGGTGATGCAGGAGCATC+AGG + chr4_4:4357504-4357523 None:intergenic 55.0%
GATCTAGGAAGAGCAGGAGG+AGG + chr4_4:4357594-4357613 None:intergenic 55.0%
GAGGATCTAGGAAGAGCAGG+AGG + chr4_4:4357597-4357616 None:intergenic 55.0%
CTGGAGGATCTAGGAAGAGC+AGG + chr4_4:4357600-4357619 None:intergenic 55.0%
AGCAGCAAGCTCAGTCTCCA+TGG + chr4_4:4357838-4357857 None:intergenic 55.0%
CTGCAACCTGTGAGCTTCAG+TGG - chr4_4:4359005-4359024 Msa0665040:intron 55.0%
ACCATCCTCCAACTTGTGGG+GGG - chr4_4:4359308-4359327 Msa0665040:CDS 55.0%
GGTCAGTTATTCCGGGACGG+AGG + chr4_4:4349961-4349980 None:intergenic 60.0%
! ATTGCGTTGGCGCTCCGTGA+AGG + chr4_4:4351833-4351852 None:intergenic 60.0%
TCCACTGCTTTGCGCCTGAC+TGG - chr4_4:4352022-4352041 Msa0665040:intron 60.0%
TCCAGTCAGGCGCAAAGCAG+TGG + chr4_4:4352026-4352045 None:intergenic 60.0%
CCTGAATGGAGACGGTGACC+TGG + chr4_4:4353915-4353934 None:intergenic 60.0%
CCAGGTCACCGTCTCCATTC+AGG - chr4_4:4353912-4353931 Msa0665040:intron 60.0%
CCGTCTCCATTCAGGGTCAG+TGG - chr4_4:4353920-4353939 Msa0665040:intron 60.0%
TCCTCAGCTGCACCTCCTTC+TGG - chr4_4:4355992-4356011 Msa0665040:intron 60.0%
! TCCAGAAGGAGGTGCAGCTG+AGG + chr4_4:4355996-4356015 None:intergenic 60.0%
GGAAGAGCAGGAGGAGGAGT+AGG + chr4_4:4357588-4357607 None:intergenic 60.0%
! TCCCCCCACAAGTTGGAGGA+TGG + chr4_4:4359312-4359331 None:intergenic 60.0%
GAAAGGGGCGAGGACCGGTT+TGG + chr4_4:4354367-4354386 None:intergenic 65.0%
! TGCTGACTGGGCAGGGTGCT+TGG - chr4_4:4358859-4358878 Msa0665040:intron 65.0%
GGCCCCCAAAGCACGCTGCA+TGG + chr4_4:4355091-4355110 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 4349623 4361345 4349623 ID=Msa0665040;Name=Msa0665040
chr4_4 mRNA 4349623 4361345 4349623 ID=Msa0665040-mRNA-1;Parent=Msa0665040;Name=Msa0665040-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.55|0.7|1|0.66|0.7|10|279|278
chr4_4 exon 4349623 4349941 4349623 ID=Msa0665040-mRNA-1:exon:1490;Parent=Msa0665040-mRNA-1
chr4_4 exon 4351052 4351127 4351052 ID=Msa0665040-mRNA-1:exon:1489;Parent=Msa0665040-mRNA-1
chr4_4 exon 4357540 4357553 4357540 ID=Msa0665040-mRNA-1:exon:1488;Parent=Msa0665040-mRNA-1
chr4_4 exon 4358358 4358485 4358358 ID=Msa0665040-mRNA-1:exon:1487;Parent=Msa0665040-mRNA-1
chr4_4 exon 4358709 4358785 4358709 ID=Msa0665040-mRNA-1:exon:1486;Parent=Msa0665040-mRNA-1
chr4_4 exon 4358869 4358962 4358869 ID=Msa0665040-mRNA-1:exon:1485;Parent=Msa0665040-mRNA-1
chr4_4 exon 4359087 4359172 4359087 ID=Msa0665040-mRNA-1:exon:1484;Parent=Msa0665040-mRNA-1
chr4_4 exon 4359272 4359347 4359272 ID=Msa0665040-mRNA-1:exon:1483;Parent=Msa0665040-mRNA-1
chr4_4 exon 4361073 4361203 4361073 ID=Msa0665040-mRNA-1:exon:1482;Parent=Msa0665040-mRNA-1
chr4_4 exon 4361231 4361345 4361231 ID=Msa0665040-mRNA-1:exon:1481;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4361231 4361345 4361231 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4361073 4361203 4361073 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4359272 4359347 4359272 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4359087 4359172 4359087 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4358869 4358962 4358869 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4358709 4358785 4358709 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4358358 4358485 4358358 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4357540 4357553 4357540 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4351052 4351127 4351052 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 CDS 4349902 4349941 4349902 ID=Msa0665040-mRNA-1:cds;Parent=Msa0665040-mRNA-1
chr4_4 three_prime_UTR 4349623 4349901 4349623 ID=Msa0665040-mRNA-1:three_prime_utr;Parent=Msa0665040-mRNA-1
Gene Sequence

>Msa0665040

ATGGTGTTTTCTACTATGTATTCTCCAACACTAAACCTTGCTATTTCTTCAACTACTACAAACAACTGTAACAGAAGAAGAGCATCAAGCACAAGTTCATGCAGAGGAGTGAATAAGAAAAGTGAATCCAAAAGCAAAGATCAAGATGATGATAAATCATCATTCAACCCTTTTGGATTTGTTACTGATAATCCATCAAGCCGTAGTGCCATTCAATTGTCTGAAAATCCTGCTGAAGCTGGCAATAAAATACAAGACAAGGGCAAGGATTACGGATCATATGTAAAATCCGGGAAGTTGAGATGGTTTGTGAGGGAAACTGGATCAGCAAATAGCAGACGAGGAACAATTGTATTCCTTCACGGAGCGCCAACGCAATCTTTTAGCTACCGAGTTGTCATGTCTGAGTTGGCAGATACAGGGTTCCACTGCTTTGCGCCTGACTGGATAGGATTTGGTTTCAGTGACAAACCACAGCCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCACGATGCATTGGATAAACTGCTTCAGGTGTTGGGGGTCGAGTCTCCGTTTTACCTAGTTGTTCAGGGATTTCTTGTAGGTTCATATGGACTGACCTGGGCCTTGAAAAATTCAAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAAGCTCATCTCCCATTCCTGGACTATTTCAGCAGCTAAGGTTCCCTCTATATGCTCTACTTGAAGCAGCAAGAAAAGCCAACTTCAACGGTACTTTCAGTGAAATAGCAGAAGGATTTGCAACTAACAGGCCTGAGAAAGTTGTTGATGCTTTGAGAATGTTCTTTTGA

Protein sequence

>Msa0665040

MVFSTMYSPTLNLAISSTTTNNCNRRRASSTSSCRGVNKKSESKSKDQDDDKSSFNPFGFVTDNPSSRSAIQLSENPAEAGNKIQDKGKDYGSYVKSGKLRWFVRETGSANSRRGTIVFLHGAPTQSFSYRVVMSELADTGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLQVLGVESPFYLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTSSSPIPGLFQQLRFPLYALLEAARKANFNGTFSEIAEGFATNRPEKVVDALRMFF*