Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850740 | XP_003615204.1 | 97.541 | 366 | 7 | 1 | 1 | 366 | 1 | 364 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850740 | sp|Q9FZ95|PUP3_ARATH | 55.490 | 337 | 143 | 2 | 17 | 353 | 1 | 330 | 1.19e-136 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850740 | G7KBC7 | 97.541 | 366 | 7 | 1 | 1 | 366 | 1 | 364 | 0.0 | 724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0850740 | 0.811413 | 7.090270e-51 | -8.615850e-47 |
| Msa0005160 | Msa0850740 | 0.863374 | 2.605751e-64 | -8.615850e-47 |
| Msa0006820 | Msa0850740 | 0.829589 | 4.729782e-55 | -8.615850e-47 |
| Msa0008850 | Msa0850740 | 0.861266 | 1.157979e-63 | -8.615850e-47 |
| Msa0017120 | Msa0850740 | 0.805526 | 1.279171e-49 | -8.615850e-47 |
| Msa0018470 | Msa0850740 | 0.806060 | 9.880143e-50 | -8.615850e-47 |
| Msa0030000 | Msa0850740 | 0.810744 | 9.899148e-51 | -8.615850e-47 |
| Msa0038310 | Msa0850740 | 0.821845 | 3.251902e-53 | -8.615850e-47 |
| Msa0039200 | Msa0850740 | 0.802766 | 4.800015e-49 | -8.615850e-47 |
| Msa0047470 | Msa0850740 | 0.873639 | 1.258535e-67 | -8.615850e-47 |
| Msa0050500 | Msa0850740 | 0.822770 | 1.982518e-53 | -8.615850e-47 |
| Msa0055280 | Msa0850740 | 0.823350 | 1.452050e-53 | -8.615850e-47 |
| Msa0057260 | Msa0850740 | 0.847790 | 9.254454e-60 | -8.615850e-47 |
| Msa0057740 | Msa0850740 | 0.866785 | 2.211566e-65 | -8.615850e-47 |
| Msa0060600 | Msa0850740 | 0.806867 | 6.675864e-50 | -8.615850e-47 |
| Msa0065390 | Msa0850740 | 0.803050 | 4.193792e-49 | -8.615850e-47 |
| Msa0068410 | Msa0850740 | 0.803006 | 4.282277e-49 | -8.615850e-47 |
| Msa0080620 | Msa0850740 | 0.804958 | 1.682266e-49 | -8.615850e-47 |
| Msa0083160 | Msa0850740 | 0.806706 | 7.222148e-50 | -8.615850e-47 |
| Msa0086090 | Msa0850740 | 0.804339 | 2.265595e-49 | -8.615850e-47 |
| Msa0098700 | Msa0850740 | 0.840960 | 6.345309e-58 | -8.615850e-47 |
| Msa0100250 | Msa0850740 | 0.819138 | 1.359034e-52 | -8.615850e-47 |
| Msa0103060 | Msa0850740 | 0.872637 | 2.728632e-67 | -8.615850e-47 |
| Msa0110710 | Msa0850740 | 0.802172 | 6.364038e-49 | -8.615850e-47 |
| Msa0605230 | Msa0850740 | 0.833828 | 4.262360e-56 | -8.615850e-47 |
| Msa0606060 | Msa0850740 | 0.833578 | 4.920536e-56 | -8.615850e-47 |
| Msa0606680 | Msa0850740 | 0.826611 | 2.467163e-54 | -8.615850e-47 |
| Msa0607280 | Msa0850740 | 0.831326 | 1.778693e-55 | -8.615850e-47 |
| Msa0610280 | Msa0850740 | 0.806875 | 6.649797e-50 | -8.615850e-47 |
| Msa0610360 | Msa0850740 | 0.807350 | 5.275964e-50 | -8.615850e-47 |
| Msa0614230 | Msa0850740 | 0.809047 | 2.294866e-50 | -8.615850e-47 |
| Msa0615850 | Msa0850740 | 0.850958 | 1.212568e-60 | -8.615850e-47 |
| Msa0616610 | Msa0850740 | 0.809226 | 2.101163e-50 | -8.615850e-47 |
| Msa0617830 | Msa0850740 | 0.855826 | 4.862286e-62 | -8.615850e-47 |
| Msa0618520 | Msa0850740 | 0.838533 | 2.717706e-57 | -8.615850e-47 |
| Msa0620090 | Msa0850740 | 0.807287 | 5.441157e-50 | -8.615850e-47 |
| Msa0620640 | Msa0850740 | 0.813822 | 2.107323e-51 | -8.615850e-47 |
| Msa0620750 | Msa0850740 | 0.823511 | 1.331947e-53 | -8.615850e-47 |
| Msa0622390 | Msa0850740 | 0.808555 | 2.924131e-50 | -8.615850e-47 |
| Msa0635990 | Msa0850740 | 0.813239 | 2.830489e-51 | -8.615850e-47 |
| Msa0638040 | Msa0850740 | 0.801620 | 8.261665e-49 | -8.615850e-47 |
| Msa0639030 | Msa0850740 | 0.819981 | 8.727753e-53 | -8.615850e-47 |
| Msa0640880 | Msa0850740 | 0.807542 | 4.805191e-50 | -8.615850e-47 |
| Msa0646390 | Msa0850740 | 0.824823 | 6.552147e-54 | -8.615850e-47 |
| Msa0649310 | Msa0850740 | 0.805648 | 1.205898e-49 | -8.615850e-47 |
| Msa0650650 | Msa0850740 | 0.800310 | 1.530366e-48 | -8.615850e-47 |
| Msa0650890 | Msa0850740 | 0.806244 | 9.038576e-50 | -8.615850e-47 |
| Msa0653710 | Msa0850740 | 0.835280 | 1.839449e-56 | -8.615850e-47 |
| Msa0654060 | Msa0850740 | 0.819540 | 1.101025e-52 | -8.615850e-47 |
| Msa0656270 | Msa0850740 | 0.849213 | 3.734760e-60 | -8.615850e-47 |
| Msa0656680 | Msa0850740 | 0.849956 | 2.317606e-60 | -8.615850e-47 |
| Msa0658650 | Msa0850740 | 0.812279 | 4.592077e-51 | -8.615850e-47 |
| Msa0659040 | Msa0850740 | 0.818308 | 2.097241e-52 | -8.615850e-47 |
| Msa0659070 | Msa0850740 | 0.802703 | 4.947315e-49 | -8.615850e-47 |
| Msa0659960 | Msa0850740 | 0.811529 | 6.688044e-51 | -8.615850e-47 |
| Msa0660820 | Msa0850740 | 0.824206 | 9.151604e-54 | -8.615850e-47 |
| Msa0669200 | Msa0850740 | 0.802348 | 5.853682e-49 | -8.615850e-47 |
| Msa0685520 | Msa0850740 | 0.804740 | 1.868118e-49 | -8.615850e-47 |
| Msa0686610 | Msa0850740 | 0.842007 | 3.362248e-58 | -8.615850e-47 |
| Msa0690720 | Msa0850740 | 0.834326 | 3.197629e-56 | -8.615850e-47 |
| Msa0697600 | Msa0850740 | 0.823788 | 1.147042e-53 | -8.615850e-47 |
| Msa0698900 | Msa0850740 | 0.865947 | 4.080420e-65 | -8.615850e-47 |
| Msa0700070 | Msa0850740 | 0.843556 | 1.302868e-58 | -8.615850e-47 |
| Msa0702070 | Msa0850740 | 0.805744 | 1.151672e-49 | -8.615850e-47 |
| Msa0704570 | Msa0850740 | 0.815346 | 9.688223e-52 | -8.615850e-47 |
| Msa0704990 | Msa0850740 | 0.816374 | 5.716220e-52 | -8.615850e-47 |
| Msa0705030 | Msa0850740 | 0.818301 | 2.105614e-52 | -8.615850e-47 |
| Msa0705050 | Msa0850740 | 0.831705 | 1.434447e-55 | -8.615850e-47 |
| Msa0714340 | Msa0850740 | 0.808493 | 3.015032e-50 | -8.615850e-47 |
| Msa0714380 | Msa0850740 | 0.800915 | 1.152106e-48 | -8.615850e-47 |
| Msa0719340 | Msa0850740 | 0.832018 | 1.200772e-55 | -8.615850e-47 |
| Msa0724050 | Msa0850740 | 0.819292 | 1.253706e-52 | -8.615850e-47 |
| Msa0738870 | Msa0850740 | 0.806677 | 7.324812e-50 | -8.615850e-47 |
| Msa0739610 | Msa0850740 | 0.824619 | 7.319012e-54 | -8.615850e-47 |
| Msa0747900 | Msa0850740 | 0.839540 | 1.490480e-57 | -8.615850e-47 |
| Msa0752830 | Msa0850740 | 0.809429 | 1.900995e-50 | -8.615850e-47 |
| Msa0763880 | Msa0850740 | 0.818218 | 2.197966e-52 | -8.615850e-47 |
| Msa0763910 | Msa0850740 | 0.822093 | 2.847611e-53 | -8.615850e-47 |
| Msa0766880 | Msa0850740 | 0.819077 | 1.403359e-52 | -8.615850e-47 |
| Msa0771960 | Msa0850740 | 0.814795 | 1.284048e-51 | -8.615850e-47 |
| Msa0772150 | Msa0850740 | 0.816657 | 4.940499e-52 | -8.615850e-47 |
| Msa0772210 | Msa0850740 | 0.812034 | 5.193008e-51 | -8.615850e-47 |
| Msa0773260 | Msa0850740 | 0.842866 | 1.990047e-58 | -8.615850e-47 |
| Msa0773290 | Msa0850740 | 0.893058 | 8.951220e-75 | -8.615850e-47 |
| Msa0781490 | Msa0850740 | -0.809753 | 1.619418e-50 | -8.615850e-47 |
| Msa0782030 | Msa0850740 | 0.809005 | 2.343434e-50 | -8.615850e-47 |
| Msa0787720 | Msa0850740 | 0.832878 | 7.351801e-56 | -8.615850e-47 |
| Msa0793060 | Msa0850740 | 0.828572 | 8.345073e-55 | -8.615850e-47 |
| Msa0804930 | Msa0850740 | 0.813102 | 3.033197e-51 | -8.615850e-47 |
| Msa0810590 | Msa0850740 | 0.800668 | 1.293634e-48 | -8.615850e-47 |
| Msa0811510 | Msa0850740 | 0.801700 | 7.956582e-49 | -8.615850e-47 |
| Msa0812660 | Msa0850740 | 0.810147 | 1.332216e-50 | -8.615850e-47 |
| Msa0813630 | Msa0850740 | 0.801791 | 7.621553e-49 | -8.615850e-47 |
| Msa0819360 | Msa0850740 | 0.816040 | 6.786009e-52 | -8.615850e-47 |
| Msa0822370 | Msa0850740 | 0.838270 | 3.177032e-57 | -8.615850e-47 |
| Msa0824770 | Msa0850740 | 0.820212 | 7.728316e-53 | -8.615850e-47 |
| Msa0834160 | Msa0850740 | 0.803587 | 3.247192e-49 | -8.615850e-47 |
| Msa0125230 | Msa0850740 | 0.839913 | 1.192425e-57 | -8.615850e-47 |
| Msa0130800 | Msa0850740 | 0.801638 | 8.194751e-49 | -8.615850e-47 |
| Msa0132620 | Msa0850740 | 0.806531 | 7.861476e-50 | -8.615850e-47 |
| Msa0133670 | Msa0850740 | 0.803727 | 3.037101e-49 | -8.615850e-47 |
| Msa0133880 | Msa0850740 | 0.807916 | 4.000447e-50 | -8.615850e-47 |
| Msa0139740 | Msa0850740 | 0.806283 | 8.870399e-50 | -8.615850e-47 |
| Msa0141670 | Msa0850740 | 0.804945 | 1.692815e-49 | -8.615850e-47 |
| Msa0146470 | Msa0850740 | 0.804778 | 1.834482e-49 | -8.615850e-47 |
| Msa0157020 | Msa0850740 | 0.821785 | 3.356809e-53 | -8.615850e-47 |
| Msa0158610 | Msa0850740 | 0.831260 | 1.846572e-55 | -8.615850e-47 |
| Msa0173280 | Msa0850740 | 0.817646 | 2.960238e-52 | -8.615850e-47 |
| Msa0178940 | Msa0850740 | 0.823918 | 1.069301e-53 | -8.615850e-47 |
| Msa0184120 | Msa0850740 | 0.802358 | 5.827300e-49 | -8.615850e-47 |
| Msa0185390 | Msa0850740 | 0.820772 | 5.749263e-53 | -8.615850e-47 |
| Msa0185950 | Msa0850740 | 0.813725 | 2.212915e-51 | -8.615850e-47 |
| Msa0188500 | Msa0850740 | 0.824638 | 7.243744e-54 | -8.615850e-47 |
| Msa0190000 | Msa0850740 | 0.814841 | 1.254517e-51 | -8.615850e-47 |
| Msa0197730 | Msa0850740 | 0.814831 | 1.261192e-51 | -8.615850e-47 |
| Msa0200840 | Msa0850740 | 0.821978 | 3.028773e-53 | -8.615850e-47 |
| Msa0200870 | Msa0850740 | 0.805815 | 1.112377e-49 | -8.615850e-47 |
| Msa0203180 | Msa0850740 | 0.847784 | 9.287762e-60 | -8.615850e-47 |
| Msa0210880 | Msa0850740 | 0.855271 | 7.058089e-62 | -8.615850e-47 |
| Msa0216210 | Msa0850740 | 0.817125 | 3.878285e-52 | -8.615850e-47 |
| Msa0222070 | Msa0850740 | 0.805173 | 1.516704e-49 | -8.615850e-47 |
| Msa0222120 | Msa0850740 | 0.808917 | 2.446864e-50 | -8.615850e-47 |
| Msa0225880 | Msa0850740 | 0.802412 | 5.681023e-49 | -8.615850e-47 |
| Msa0230980 | Msa0850740 | 0.855158 | 7.608574e-62 | -8.615850e-47 |
| Msa0234180 | Msa0850740 | 0.825196 | 5.347580e-54 | -8.615850e-47 |
| Msa0369780 | Msa0850740 | 0.809206 | 2.122014e-50 | -8.615850e-47 |
| Msa0373130 | Msa0850740 | 0.807273 | 5.478268e-50 | -8.615850e-47 |
| Msa0373950 | Msa0850740 | 0.816652 | 4.952438e-52 | -8.615850e-47 |
| Msa0378700 | Msa0850740 | 0.806950 | 6.412226e-50 | -8.615850e-47 |
| Msa0393540 | Msa0850740 | 0.801245 | 9.861081e-49 | -8.615850e-47 |
| Msa0401340 | Msa0850740 | 0.813432 | 2.567894e-51 | -8.615850e-47 |
| Msa0417150 | Msa0850740 | 0.858003 | 1.110094e-62 | -8.615850e-47 |
| Msa0421800 | Msa0850740 | 0.866634 | 2.469731e-65 | -8.615850e-47 |
| Msa0423110 | Msa0850740 | 0.831221 | 1.887028e-55 | -8.615850e-47 |
| Msa0426860 | Msa0850740 | 0.801995 | 6.920031e-49 | -8.615850e-47 |
| Msa0427050 | Msa0850740 | 0.841383 | 4.913275e-58 | -8.615850e-47 |
| Msa0431520 | Msa0850740 | 0.805483 | 1.306233e-49 | -8.615850e-47 |
| Msa0448120 | Msa0850740 | 0.813732 | 2.205173e-51 | -8.615850e-47 |
| Msa0456480 | Msa0850740 | 0.853866 | 1.799483e-61 | -8.615850e-47 |
| Msa0458790 | Msa0850740 | 0.807704 | 4.439406e-50 | -8.615850e-47 |
| Msa0463540 | Msa0850740 | 0.842288 | 2.833165e-58 | -8.615850e-47 |
| Msa0466830 | Msa0850740 | 0.828775 | 7.453582e-55 | -8.615850e-47 |
| Msa0467080 | Msa0850740 | 0.801583 | 8.408201e-49 | -8.615850e-47 |
| Msa0467800 | Msa0850740 | 0.859681 | 3.495754e-63 | -8.615850e-47 |
| Msa0467880 | Msa0850740 | 0.859530 | 3.880327e-63 | -8.615850e-47 |
| Msa0481050 | Msa0850740 | 0.815075 | 1.113025e-51 | -8.615850e-47 |
| Msa0243470 | Msa0850740 | 0.821391 | 4.140039e-53 | -8.615850e-47 |
| Msa0246300 | Msa0850740 | 0.843513 | 1.337973e-58 | -8.615850e-47 |
| Msa0251150 | Msa0850740 | 0.815509 | 8.916167e-52 | -8.615850e-47 |
| Msa0252180 | Msa0850740 | 0.818828 | 1.598956e-52 | -8.615850e-47 |
| Msa0259330 | Msa0850740 | 0.816157 | 6.391689e-52 | -8.615850e-47 |
| Msa0263430 | Msa0850740 | 0.812394 | 4.333793e-51 | -8.615850e-47 |
| Msa0263620 | Msa0850740 | 0.804961 | 1.679727e-49 | -8.615850e-47 |
| Msa0265580 | Msa0850740 | 0.807125 | 5.888803e-50 | -8.615850e-47 |
| Msa0270460 | Msa0850740 | 0.865063 | 7.748803e-65 | -8.615850e-47 |
| Msa0281940 | Msa0850740 | 0.820239 | 7.620752e-53 | -8.615850e-47 |
| Msa0284870 | Msa0850740 | 0.839234 | 1.790476e-57 | -8.615850e-47 |
| Msa0290600 | Msa0850740 | 0.801141 | 1.035582e-48 | -8.615850e-47 |
| Msa0301020 | Msa0850740 | 0.816112 | 6.539908e-52 | -8.615850e-47 |
| Msa0301460 | Msa0850740 | 0.809804 | 1.579165e-50 | -8.615850e-47 |
| Msa0304110 | Msa0850740 | 0.810090 | 1.370423e-50 | -8.615850e-47 |
| Msa0304870 | Msa0850740 | 0.804010 | 2.652498e-49 | -8.615850e-47 |
| Msa0309060 | Msa0850740 | 0.850213 | 1.963322e-60 | -8.615850e-47 |
| Msa0323640 | Msa0850740 | 0.804053 | 2.598373e-49 | -8.615850e-47 |
| Msa0333900 | Msa0850740 | 0.810089 | 1.371044e-50 | -8.615850e-47 |
| Msa0334020 | Msa0850740 | 0.809695 | 1.666569e-50 | -8.615850e-47 |
| Msa0336270 | Msa0850740 | 0.837342 | 5.501062e-57 | -8.615850e-47 |
| Msa0341190 | Msa0850740 | 0.818738 | 1.676237e-52 | -8.615850e-47 |
| Msa0341260 | Msa0850740 | 0.802595 | 5.206864e-49 | -8.615850e-47 |
| Msa0362430 | Msa0850740 | 0.819784 | 9.684860e-53 | -8.615850e-47 |
| Msa0486860 | Msa0850740 | 0.830330 | 3.121181e-55 | -8.615850e-47 |
| Msa0500490 | Msa0850740 | 0.817781 | 2.759039e-52 | -8.615850e-47 |
| Msa0509540 | Msa0850740 | 0.809051 | 2.290346e-50 | -8.615850e-47 |
| Msa0514260 | Msa0850740 | 0.866244 | 3.284607e-65 | -8.615850e-47 |
| Msa0524090 | Msa0850740 | 0.803765 | 2.981522e-49 | -8.615850e-47 |
| Msa0534420 | Msa0850740 | 0.851498 | 8.533672e-61 | -8.615850e-47 |
| Msa0538000 | Msa0850740 | 0.823003 | 1.749622e-53 | -8.615850e-47 |
| Msa0540340 | Msa0850740 | 0.827872 | 1.230840e-54 | -8.615850e-47 |
| Msa0542040 | Msa0850740 | 0.814332 | 1.626130e-51 | -8.615850e-47 |
| Msa0549330 | Msa0850740 | 0.818416 | 1.982572e-52 | -8.615850e-47 |
| Msa0549740 | Msa0850740 | 0.821111 | 4.803810e-53 | -8.615850e-47 |
| Msa0550630 | Msa0850740 | 0.821961 | 3.055973e-53 | -8.615850e-47 |
| Msa0553520 | Msa0850740 | 0.829290 | 5.591186e-55 | -8.615850e-47 |
| Msa0558890 | Msa0850740 | 0.829526 | 4.900637e-55 | -8.615850e-47 |
| Msa0568610 | Msa0850740 | 0.842759 | 2.125095e-58 | -8.615850e-47 |
| Msa0576600 | Msa0850740 | 0.830661 | 2.589644e-55 | -8.615850e-47 |
| Msa0577870 | Msa0850740 | 0.813426 | 2.574576e-51 | -8.615850e-47 |
| Msa0583310 | Msa0850740 | 0.828426 | 9.050146e-55 | -8.615850e-47 |
| Msa0595780 | Msa0850740 | 0.806862 | 6.694746e-50 | -8.615850e-47 |
| Msa0844100 | Msa0850740 | 0.816895 | 4.367989e-52 | -8.615850e-47 |
| Msa0850720 | Msa0850740 | 0.942441 | 7.144724e-102 | -8.615850e-47 |
| Msa0850740 | Msa0851740 | 0.814164 | 1.771508e-51 | -8.615850e-47 |
| Msa0850740 | Msa0859510 | 0.803416 | 3.522341e-49 | -8.615850e-47 |
| Msa0850740 | Msa0859520 | 0.825332 | 4.965712e-54 | -8.615850e-47 |
| Msa0850740 | Msa0859530 | 0.820992 | 5.115849e-53 | -8.615850e-47 |
| Msa0850740 | Msa0861560 | 0.806569 | 7.718645e-50 | -8.615850e-47 |
| Msa0850740 | Msa0861800 | 0.825760 | 3.932214e-54 | -8.615850e-47 |
| Msa0850740 | Msa0899730 | 0.809779 | 1.598234e-50 | -8.615850e-47 |
| Msa0850740 | Msa0913120 | 0.858308 | 9.005098e-63 | -8.615850e-47 |
| Msa0850740 | Msa0929820 | 0.825295 | 5.068365e-54 | -8.615850e-47 |
| Msa0850740 | Msa0934830 | 0.859950 | 2.899733e-63 | -8.615850e-47 |
| Msa0850740 | Msa0964650 | 0.847896 | 8.650809e-60 | -8.615850e-47 |
| Msa0850740 | Msa0964680 | 0.802752 | 4.832688e-49 | -8.615850e-47 |
| Msa0850740 | Msa0971860 | 0.875427 | 3.108758e-68 | -8.615850e-47 |
| Msa0850740 | Msa0975560 | 0.800554 | 1.364642e-48 | -8.615850e-47 |
| Msa0850740 | Msa0978000 | 0.815614 | 8.445695e-52 | -8.615850e-47 |
| Msa0850740 | Msa0981680 | 0.826347 | 2.851626e-54 | -8.615850e-47 |
| Msa0850740 | Msa0982590 | 0.803501 | 3.383375e-49 | -8.615850e-47 |
| Msa0850740 | Msa0992570 | 0.829330 | 5.468847e-55 | -8.615850e-47 |
| Msa0850740 | Msa0992590 | 0.811137 | 8.135235e-51 | -8.615850e-47 |
| Msa0850740 | Msa1002040 | 0.815170 | 1.060364e-51 | -8.615850e-47 |
| Msa0850740 | Msa1024580 | 0.827686 | 1.364240e-54 | -8.615850e-47 |
| Msa0850740 | Msa1030430 | 0.841758 | 3.913541e-58 | -8.615850e-47 |
| Msa0850740 | Msa1033160 | 0.805667 | 1.195238e-49 | -8.615850e-47 |
| Msa0850740 | Msa1043870 | 0.834287 | 3.271069e-56 | -8.615850e-47 |
| Msa0850740 | Msa1044040 | 0.816987 | 4.164315e-52 | -8.615850e-47 |
| Msa0850740 | Msa1055360 | 0.806017 | 1.008857e-49 | -8.615850e-47 |
| Msa0850740 | Msa1067910 | 0.851135 | 1.080706e-60 | -8.615850e-47 |
| Msa0850740 | Msa1069440 | 0.803807 | 2.922537e-49 | -8.615850e-47 |
| Msa0850740 | Msa1070900 | 0.815698 | 8.092114e-52 | -8.615850e-47 |
| Msa0850740 | Msa1079610 | 0.822715 | 2.041808e-53 | -8.615850e-47 |
| Msa0850740 | Msa1085370 | 0.815710 | 8.042458e-52 | -8.615850e-47 |
| Msa0850740 | Msa1102180 | 0.846305 | 2.361268e-59 | -8.615850e-47 |
| Msa0850740 | Msa1102200 | 0.801838 | 7.454522e-49 | -8.615850e-47 |
| Msa0850740 | Msa1115580 | 0.811904 | 5.545073e-51 | -8.615850e-47 |
| Msa0850740 | Msa1124440 | 0.812955 | 3.267315e-51 | -8.615850e-47 |
| Msa0850740 | Msa1130660 | 0.808664 | 2.771950e-50 | -8.615850e-47 |
| Msa0850740 | Msa1138600 | 0.828237 | 1.005006e-54 | -8.615850e-47 |
| Msa0850740 | Msa1157160 | 0.807317 | 5.361689e-50 | -8.615850e-47 |
| Msa0850740 | Msa1161160 | 0.822073 | 2.878261e-53 | -8.615850e-47 |
| Msa0850740 | Msa1166180 | 0.808208 | 3.467804e-50 | -8.615850e-47 |
| Msa0850740 | Msa1166280 | 0.803998 | 2.667011e-49 | -8.615850e-47 |
| Msa0850740 | Msa1168130 | 0.804272 | 2.339383e-49 | -8.615850e-47 |
| Msa0850740 | Msa1186580 | 0.830405 | 2.992300e-55 | -8.615850e-47 |
| Msa0850740 | Msa1195860 | 0.801988 | 6.944578e-49 | -8.615850e-47 |
| Msa0850740 | Msa1198450 | 0.879781 | 9.417737e-70 | -8.615850e-47 |
| Msa0850740 | Msa1211260 | 0.820399 | 7.003007e-53 | -8.615850e-47 |
| Msa0850740 | Msa1211300 | 0.819409 | 1.179148e-52 | -8.615850e-47 |
| Msa0850740 | Msa1211390 | 0.860667 | 1.760951e-63 | -8.615850e-47 |
| Msa0850740 | Msa1219780 | -0.811058 | 8.463050e-51 | -8.615850e-47 |
| Msa0850740 | Msa1220740 | 0.858420 | 8.342177e-63 | -8.615850e-47 |
| Msa0850740 | Msa1238370 | 0.808541 | 2.944763e-50 | -8.615850e-47 |
| Msa0850740 | Msa1238410 | 0.831012 | 2.124667e-55 | -8.615850e-47 |
| Msa0850740 | Msa1246420 | 0.816306 | 5.918780e-52 | -8.615850e-47 |
| Msa0850740 | Msa1274310 | 0.811497 | 6.796619e-51 | -8.615850e-47 |
| Msa0850740 | Msa1282210 | 0.808171 | 3.531443e-50 | -8.615850e-47 |
| Msa0850740 | Msa1283120 | 0.822206 | 2.681012e-53 | -8.615850e-47 |
| Msa0850740 | Msa1284030 | 0.811783 | 5.891206e-51 | -8.615850e-47 |
| Msa0850740 | Msa1284390 | 0.812296 | 4.553090e-51 | -8.615850e-47 |
| Msa0850740 | Msa1286910 | 0.818392 | 2.007637e-52 | -8.615850e-47 |
| Msa0850740 | Msa1292730 | 0.803104 | 4.087245e-49 | -8.615850e-47 |
| Msa0850740 | Msa1299370 | 0.843319 | 1.507587e-58 | -8.615850e-47 |
| Msa0850740 | Msa1299900 | 0.842631 | 2.298414e-58 | -8.615850e-47 |
| Msa0850740 | Msa1302780 | 0.824974 | 6.032906e-54 | -8.615850e-47 |
| Msa0850740 | Msa1306200 | 0.803772 | 2.972186e-49 | -8.615850e-47 |
| Msa0850740 | Msa1321390 | 0.802477 | 5.506159e-49 | -8.615850e-47 |
| Msa0850740 | Msa1322420 | 0.837512 | 4.974635e-57 | -8.615850e-47 |
| Msa0850740 | Msa1327040 | 0.825538 | 4.438905e-54 | -8.615850e-47 |
| Msa0850740 | Msa1327820 | 0.842175 | 3.036092e-58 | -8.615850e-47 |
| Msa0850740 | Msa1334650 | 0.847894 | 8.664726e-60 | -8.615850e-47 |
| Msa0850740 | Msa1342400 | 0.808297 | 3.319735e-50 | -8.615850e-47 |
| Msa0850740 | Msa1349360 | 0.837725 | 4.386798e-57 | -8.615850e-47 |
| Msa0850740 | Msa1349810 | 0.801286 | 9.672781e-49 | -8.615850e-47 |
| Msa0850740 | Msa1352290 | 0.805914 | 1.060341e-49 | -8.615850e-47 |
| Msa0850740 | Msa1361190 | 0.838469 | 2.823702e-57 | -8.615850e-47 |
| Msa0850740 | Msa1364520 | 0.816706 | 4.815173e-52 | -8.615850e-47 |
| Msa0850740 | Msa1365210 | 0.827461 | 1.545027e-54 | -8.615850e-47 |
| Msa0850740 | Msa1373910 | 0.800929 | 1.144541e-48 | -8.615850e-47 |
| Msa0850740 | Msa1381130 | 0.815354 | 9.652996e-52 | -8.615850e-47 |
| Msa0850740 | Msa1388520 | 0.827797 | 1.282479e-54 | -8.615850e-47 |
| Msa0850740 | Msa1392680 | 0.805395 | 1.362816e-49 | -8.615850e-47 |
| Msa0850740 | Msa1395580 | 0.841208 | 5.461929e-58 | -8.615850e-47 |
| Msa0850740 | Msa1407210 | -0.809874 | 1.524786e-50 | -8.615850e-47 |
| Msa0850740 | Msa1413220 | 0.821058 | 4.941262e-53 | -8.615850e-47 |
| Msa0850740 | Msa1413900 | 0.810996 | 8.728457e-51 | -8.615850e-47 |
| Msa0850740 | Msa1415270 | 0.879030 | 1.737242e-69 | -8.615850e-47 |
| Msa0850740 | Msa1428440 | 0.800455 | 1.429676e-48 | -8.615850e-47 |
| Msa0850740 | Msa1435470 | 0.851445 | 8.831898e-61 | -8.615850e-47 |
| Msa0850740 | Msa1439800 | 0.814825 | 1.264526e-51 | -8.615850e-47 |
| Msa0850740 | Msa1440180 | 0.857553 | 1.509015e-62 | -8.615850e-47 |
| Msa0850740 | Msa1449740 | 0.855763 | 5.073067e-62 | -8.615850e-47 |
| Msa0850740 | Msa1452200 | 0.810311 | 1.227653e-50 | -8.615850e-47 |
| Msa0850740 | Msa1458920 | 0.858500 | 7.892548e-63 | -8.615850e-47 |
| Msa0850740 | Msa1462600 | 0.812917 | 3.331026e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850740 | MtrunA17_Chr5g0426921 | 97.541 | 366 | 7 | 1 | 1 | 366 | 1 | 364 | 0.0 | 724 |
| Msa0850740 | MtrunA17_Chr3g0132551 | 63.215 | 367 | 125 | 4 | 7 | 365 | 4 | 368 | 4.87e-168 | 473 |
| Msa0850740 | MtrunA17_Chr3g0132561 | 55.068 | 365 | 120 | 5 | 9 | 365 | 5 | 333 | 6.01e-137 | 393 |
| Msa0850740 | MtrunA17_Chr4g0055041 | 35.312 | 337 | 209 | 3 | 27 | 360 | 42 | 372 | 5.16e-65 | 211 |
| Msa0850740 | MtrunA17_Chr2g0296491 | 35.345 | 348 | 198 | 7 | 12 | 358 | 65 | 386 | 4.32e-63 | 206 |
| Msa0850740 | MtrunA17_Chr2g0283381 | 33.134 | 335 | 216 | 2 | 22 | 356 | 44 | 370 | 8.24e-59 | 195 |
| Msa0850740 | MtrunA17_Chr3g0102091 | 32.520 | 369 | 234 | 5 | 3 | 366 | 30 | 388 | 1.20e-56 | 189 |
| Msa0850740 | MtrunA17_Chr7g0249781 | 33.819 | 343 | 214 | 4 | 14 | 355 | 23 | 353 | 4.56e-55 | 184 |
| Msa0850740 | MtrunA17_Chr2g0296481 | 34.579 | 321 | 189 | 7 | 41 | 355 | 72 | 377 | 3.09e-52 | 178 |
| Msa0850740 | MtrunA17_Chr8g0346091 | 32.344 | 337 | 201 | 3 | 20 | 350 | 53 | 368 | 3.28e-52 | 177 |
| Msa0850740 | MtrunA17_Chr6g0483671 | 32.653 | 147 | 99 | 0 | 198 | 344 | 5 | 151 | 5.37e-23 | 94.4 |
| Msa0850740 | MtrunA17_Chr2g0313931 | 36.719 | 128 | 68 | 2 | 22 | 148 | 34 | 149 | 1.43e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850740 | AT2G33750.2 | 58.430 | 344 | 136 | 2 | 17 | 360 | 3 | 339 | 4.99e-141 | 404 |
| Msa0850740 | AT1G28220.1 | 55.490 | 337 | 143 | 2 | 17 | 353 | 1 | 330 | 1.21e-137 | 396 |
| Msa0850740 | AT2G33750.1 | 56.620 | 355 | 136 | 3 | 17 | 360 | 3 | 350 | 2.92e-137 | 395 |
| Msa0850740 | AT1G28230.1 | 58.621 | 348 | 138 | 3 | 17 | 359 | 1 | 347 | 7.45e-136 | 391 |
| Msa0850740 | AT4G18220.1 | 35.404 | 322 | 194 | 5 | 41 | 361 | 66 | 374 | 3.64e-57 | 191 |
| Msa0850740 | AT4G18210.1 | 32.964 | 361 | 221 | 5 | 7 | 361 | 31 | 376 | 3.76e-53 | 181 |
| Msa0850740 | AT4G18205.1 | 34.891 | 321 | 192 | 4 | 41 | 357 | 61 | 368 | 2.02e-51 | 176 |
| Msa0850740 | AT4G18197.1 | 32.722 | 327 | 203 | 4 | 41 | 363 | 64 | 377 | 5.06e-46 | 162 |
| Msa0850740 | AT1G30840.2 | 33.628 | 339 | 207 | 6 | 8 | 342 | 12 | 336 | 6.15e-45 | 159 |
| Msa0850740 | AT1G30840.1 | 33.628 | 339 | 207 | 6 | 8 | 342 | 12 | 336 | 6.15e-45 | 159 |
| Msa0850740 | AT1G44750.6 | 32.464 | 345 | 219 | 5 | 13 | 355 | 24 | 356 | 6.19e-44 | 155 |
| Msa0850740 | AT1G44750.2 | 32.464 | 345 | 219 | 5 | 13 | 355 | 24 | 356 | 6.19e-44 | 155 |
| Msa0850740 | AT1G44750.1 | 32.641 | 337 | 214 | 4 | 20 | 355 | 44 | 368 | 8.47e-44 | 155 |
| Msa0850740 | AT4G18195.1 | 32.177 | 317 | 202 | 3 | 41 | 355 | 67 | 372 | 1.26e-43 | 155 |
| Msa0850740 | AT1G44750.7 | 35.600 | 250 | 159 | 2 | 107 | 355 | 44 | 292 | 2.72e-43 | 152 |
| Msa0850740 | AT1G44750.5 | 35.600 | 250 | 159 | 2 | 107 | 355 | 44 | 292 | 2.72e-43 | 152 |
| Msa0850740 | AT1G44750.4 | 35.600 | 250 | 159 | 2 | 107 | 355 | 44 | 292 | 2.72e-43 | 152 |
| Msa0850740 | AT1G44750.8 | 35.600 | 250 | 159 | 2 | 107 | 355 | 44 | 292 | 2.72e-43 | 152 |
| Msa0850740 | AT1G44750.3 | 35.600 | 250 | 159 | 2 | 107 | 355 | 44 | 292 | 2.72e-43 | 152 |
| Msa0850740 | AT4G18190.1 | 32.410 | 361 | 225 | 6 | 7 | 361 | 24 | 371 | 2.80e-42 | 152 |
| Msa0850740 | AT2G24220.1 | 33.631 | 336 | 207 | 4 | 2 | 337 | 21 | 340 | 1.76e-41 | 149 |
| Msa0850740 | AT2G24220.2 | 33.631 | 336 | 207 | 4 | 2 | 337 | 39 | 358 | 2.60e-41 | 149 |
| Msa0850740 | AT4G08700.1 | 27.322 | 366 | 238 | 7 | 5 | 357 | 9 | 359 | 2.03e-37 | 138 |
| Msa0850740 | AT5G41160.1 | 27.049 | 366 | 242 | 7 | 5 | 357 | 9 | 362 | 1.18e-35 | 134 |
| Msa0850740 | AT1G19770.1 | 27.097 | 310 | 208 | 5 | 51 | 349 | 88 | 390 | 2.89e-24 | 103 |
| Msa0850740 | AT1G57943.1 | 28.399 | 331 | 204 | 9 | 49 | 365 | 85 | 396 | 7.41e-24 | 102 |
| Msa0850740 | AT1G57943.2 | 28.399 | 331 | 204 | 9 | 49 | 365 | 84 | 395 | 7.55e-24 | 102 |
| Msa0850740 | AT1G57980.1 | 27.576 | 330 | 207 | 8 | 49 | 365 | 82 | 392 | 7.69e-21 | 93.2 |
| Msa0850740 | AT1G57990.1 | 25.688 | 327 | 217 | 8 | 49 | 365 | 78 | 388 | 8.60e-20 | 90.1 |
| Msa0850740 | AT1G47603.1 | 26.879 | 346 | 215 | 10 | 26 | 350 | 53 | 381 | 3.55e-18 | 85.5 |
| Msa0850740 | AT1G09860.1 | 27.795 | 331 | 200 | 13 | 49 | 357 | 69 | 382 | 2.50e-15 | 77.0 |
| Msa0850740 | AT1G75470.1 | 20.902 | 244 | 179 | 4 | 124 | 355 | 144 | 385 | 1.37e-12 | 68.9 |
Find 83 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGGTGCTCTCACTTT+GGG | 0.109096 | 5_4:+40467285 | Msa0850740:CDS |
| GCTAAGGGAATGAGAATTAT+TGG | 0.211382 | 5_4:-40465429 | None:intergenic |
| TGTGCCTCTTCATTGCTATC+TGG | 0.276545 | 5_4:+40467178 | Msa0850740:CDS |
| AATTAAAACAAAATGAAAAT+AGG | 0.291059 | 5_4:-40467552 | None:intergenic |
| GACCCTTGGGAGTGTTGTTT+TGG | 0.297124 | 5_4:+40465737 | Msa0850740:CDS |
| AACAGCTAAGATTTCAGTTA+TGG | 0.309424 | 5_4:-40467224 | None:intergenic |
| TTGGCTTCTGCTGCTTTGTA+TGG | 0.317318 | 5_4:+40465834 | Msa0850740:CDS |
| TTGCTTTGGTGCTCTCACTT+TGG | 0.319968 | 5_4:+40467284 | Msa0850740:CDS |
| TCTTAACATGTAAAGAAGTA+TGG | 0.337721 | 5_4:-40465160 | None:intergenic |
| TATTACTTATTCTCTTGTTA+TGG | 0.358957 | 5_4:+40465905 | Msa0850740:CDS |
| TCTACTAAGGATTATGTGAT+TGG | 0.363277 | 5_4:+40465798 | Msa0850740:CDS |
| AGCAGAGAAAGGGGTTGCTT+TGG | 0.380450 | 5_4:+40467270 | Msa0850740:CDS |
| TTATTATTGTTGTTGCCGTT+AGG | 0.386452 | 5_4:-40465495 | None:intergenic |
| TTGTGGTCATTCCTCAAGTT+GGG | 0.393893 | 5_4:-40467479 | None:intergenic |
| GGATTGAATTTAGAATTAGA+AGG | 0.398979 | 5_4:-40465302 | None:intergenic |
| ACAGCTAAGATTTCAGTTAT+GGG | 0.401537 | 5_4:-40467223 | None:intergenic |
| AACGGTAACGGTAACGGTTG+TGG | 0.403687 | 5_4:-40465464 | None:intergenic |
| AGAAATTTCAAGCAGAGAAA+GGG | 0.404504 | 5_4:+40467260 | Msa0850740:CDS |
| TATTATTGTTGTTGCCGTTA+GGG | 0.409224 | 5_4:-40465494 | None:intergenic |
| ACCACCTTTGTTTATCGCTT+CGG | 0.421218 | 5_4:+40465536 | Msa0850740:CDS |
| GAGAAATTTCAAGCAGAGAA+AGG | 0.424086 | 5_4:+40467259 | Msa0850740:CDS |
| TTTGTGGTCATTCCTCAAGT+TGG | 0.431393 | 5_4:-40467480 | None:intergenic |
| CTAAGGGAATGAGAATTATT+GGG | 0.433473 | 5_4:-40465428 | None:intergenic |
| TTGAAATCCCTTGCTTCCCT+TGG | 0.436924 | 5_4:-40467067 | None:intergenic |
| GAAGCAAGGGATTTCAAGCT+TGG | 0.447995 | 5_4:+40467073 | Msa0850740:CDS |
| GCCATACACGTTTGCCGCCA+TGG | 0.460981 | 5_4:-40465377 | None:intergenic |
| AAGCAAGGGATTTCAAGCTT+GGG | 0.461079 | 5_4:+40467074 | Msa0850740:CDS |
| TCCATGGCGGCAAACGTGTA+TGG | 0.467259 | 5_4:+40465376 | Msa0850740:CDS |
| AAAATAGGATAAAATTTGAC+GGG | 0.470242 | 5_4:-40467537 | None:intergenic |
| ACTATTCTTTCCACCATGGC+TGG | 0.473175 | 5_4:-40465237 | None:intergenic |
| ACTTGTTGGTGAGTCTACTA+AGG | 0.477683 | 5_4:+40465785 | Msa0850740:CDS |
| GTGATTGAATGAAGACTTTG+AGG | 0.480812 | 5_4:-40467376 | None:intergenic |
| TTGGGAAGGCAGATGTTTCA+AGG | 0.487413 | 5_4:-40465410 | None:intergenic |
| CGATTTCGCAGGTGATTCCA+AGG | 0.488583 | 5_4:+40467050 | Msa0850740:intron |
| TGGTCCACCACATGTTCCTA+TGG | 0.488999 | 5_4:-40465331 | None:intergenic |
| GATGGTGGAGATAGACTTGT+TGG | 0.502081 | 5_4:+40465771 | Msa0850740:CDS |
| TTTATCGCTTCGGCAGTCAT+CGG | 0.508139 | 5_4:+40465546 | Msa0850740:CDS |
| CACATGTTCCTATGGCTAAG+AGG | 0.511689 | 5_4:-40465323 | None:intergenic |
| TTTCGTAACGGTAACGGTAA+CGG | 0.513127 | 5_4:-40465470 | None:intergenic |
| AGCAAATAATTAACCAGCCA+TGG | 0.520477 | 5_4:+40465224 | Msa0850740:exon |
| GTAGAGGTAGTCGTCTAAAC+CGG | 0.524198 | 5_4:-40465577 | None:intergenic |
| GAAAATAGGATAAAATTTGA+CGG | 0.529918 | 5_4:-40467538 | None:intergenic |
| TTATAAACCAACTCCAACAA+CGG | 0.529943 | 5_4:-40465867 | None:intergenic |
| GAAATTTCAAGCAGAGAAAG+GGG | 0.546511 | 5_4:+40467261 | Msa0850740:CDS |
| GCTTTGGTGCTCTCACTTTG+GGG | 0.547915 | 5_4:+40467286 | Msa0850740:CDS |
| AATTCAATCCTCTTAGCCAT+AGG | 0.559419 | 5_4:+40465315 | Msa0850740:CDS |
| ACGGTTGTGGATGTGAGAAA+TGG | 0.560217 | 5_4:-40465451 | None:intergenic |
| AGGTGATTCCAAGGGAAGCA+AGG | 0.563127 | 5_4:+40467059 | Msa0850740:intron |
| TTAATTATTTGCTAGAGTAG+AGG | 0.564550 | 5_4:-40465214 | None:intergenic |
| CGGTAGACGCTTTATGCCGC+AGG | 0.567407 | 5_4:-40465601 | None:intergenic |
| CTGCGGCATAAAGCGTCTAC+CGG | 0.571271 | 5_4:+40465602 | Msa0850740:CDS |
| TACCGTTACGAAAACCCTAA+CGG | 0.577948 | 5_4:+40465480 | Msa0850740:CDS |
| GCAGTCATCGGAGTTCTCAC+CGG | 0.580044 | 5_4:+40465558 | Msa0850740:CDS |
| ATGCGTTTATACTTCATCCA+TGG | 0.581468 | 5_4:+40465360 | Msa0850740:CDS |
| AGCAAGGGATTTCAAGCTTG+GGG | 0.584822 | 5_4:+40467075 | Msa0850740:CDS |
| AGTACTATGTTGTGCTAGTG+TGG | 0.588131 | 5_4:+40467104 | Msa0850740:CDS |
| CTCTTAGCCATAGGAACATG+TGG | 0.591598 | 5_4:+40465324 | Msa0850740:CDS |
| CTAGCTTTGTACCCAACTTG+AGG | 0.592540 | 5_4:+40467468 | Msa0850740:three_prime_UTR |
| AATACCAGATAGCAATGAAG+AGG | 0.606353 | 5_4:-40467182 | None:intergenic |
| GTGCCAAAACAACACTCCCA+AGG | 0.608152 | 5_4:-40465740 | None:intergenic |
| TGCCAAAACAACACTCCCAA+GGG | 0.608894 | 5_4:-40465739 | None:intergenic |
| GTGGATGTGAGAAATGGCTA+AGG | 0.612500 | 5_4:-40465445 | None:intergenic |
| GCTAACTATTCTTTCCACCA+TGG | 0.616782 | 5_4:-40465241 | None:intergenic |
| GGTGATTCCAAGGGAAGCAA+GGG | 0.617537 | 5_4:+40467060 | Msa0850740:intron |
| TGACGGGGTACAACAATCAG+AGG | 0.624051 | 5_4:-40467521 | None:intergenic |
| CGCGGTGAAAGCTAAGTGTG+AGG | 0.632940 | 5_4:-40465649 | None:intergenic |
| GGGAATGAGAATTATTGGGA+AGG | 0.638688 | 5_4:-40465424 | None:intergenic |
| AAGTATAAACGCATTACTAG+TGG | 0.641109 | 5_4:-40465351 | None:intergenic |
| GCTTTATGCCGCAGGCGTAG+AGG | 0.652914 | 5_4:-40465593 | None:intergenic |
| TTGGCACTGAATTCTGATGG+TGG | 0.661099 | 5_4:+40465756 | Msa0850740:CDS |
| GATTTCGCAGGTGATTCCAA+GGG | 0.661936 | 5_4:+40467051 | Msa0850740:intron |
| GACGACTACCTCTACGCCTG+CGG | 0.669034 | 5_4:+40465585 | Msa0850740:CDS |
| TGGATGTGAGAAATGGCTAA+GGG | 0.669361 | 5_4:-40465444 | None:intergenic |
| CGTTTATACTTCATCCATGG+CGG | 0.677695 | 5_4:+40465363 | Msa0850740:CDS |
| TTAGCCATAGGAACATGTGG+TGG | 0.677866 | 5_4:+40465327 | Msa0850740:CDS |
| AAATAATTAACCAGCCATGG+TGG | 0.679882 | 5_4:+40465227 | Msa0850740:exon |
| GACGGGGTACAACAATCAGA+GGG | 0.695126 | 5_4:-40467520 | None:intergenic |
| ACTGCCGAAGCGATAAACAA+AGG | 0.695167 | 5_4:-40465540 | None:intergenic |
| ATTAACGAAGAAGTTGACAC+CGG | 0.698512 | 5_4:-40465621 | None:intergenic |
| GCCGAAGCGATAAACAAAGG+TGG | 0.698965 | 5_4:-40465537 | None:intergenic |
| AAATAGGATAAAATTTGACG+GGG | 0.721060 | 5_4:-40467536 | None:intergenic |
| TAGTGTGGAGTGCTATAATG+TGG | 0.749239 | 5_4:+40467119 | Msa0850740:CDS |
| CTCACACTTAGCTTTCACCG+CGG | 0.755684 | 5_4:+40465650 | Msa0850740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTAATTCTATTTTATTT+TGG | - | chr5_4:40466468-40466487 | None:intergenic | 10.0% |
| !! | AATAAAATAGAATTAGAATA+AGG | + | chr5_4:40466469-40466488 | Msa0850740:intron | 10.0% |
| !! | ATTAATAATTCAATATCAAT+GGG | - | chr5_4:40466556-40466575 | None:intergenic | 10.0% |
| !!! | TTTCTTTTAATTCTTTATTT+AGG | + | chr5_4:40466706-40466725 | Msa0850740:intron | 10.0% |
| !! | AATTAAAACAAAATGAAAAT+AGG | - | chr5_4:40467555-40467574 | None:intergenic | 10.0% |
| !!! | TTTTCATTTTGTTTTAATTT+TGG | + | chr5_4:40467556-40467575 | Msa0850740:three_prime_UTR | 10.0% |
| !!! | TTTCATTTTGTTTTAATTTT+GGG | + | chr5_4:40467557-40467576 | Msa0850740:three_prime_UTR | 10.0% |
| !!! | TTTTTGTTTATAACAATGAT+TGG | - | chr5_4:40466190-40466209 | None:intergenic | 15.0% |
| !! | TTAGATTTATTTATTGTATG+TGG | - | chr5_4:40466264-40466283 | None:intergenic | 15.0% |
| !! | CATTAATAATTCAATATCAA+TGG | - | chr5_4:40466557-40466576 | None:intergenic | 15.0% |
| !!! | TAAATTTCTTTTGATTCTAT+TGG | + | chr5_4:40466732-40466751 | Msa0850740:intron | 15.0% |
| !!! | TCTAAAACATTTTTTTCTAT+TGG | + | chr5_4:40466827-40466846 | Msa0850740:intron | 15.0% |
| !!! | ATTTTTTTTTAGATAACAAG+AGG | + | chr5_4:40466929-40466948 | Msa0850740:intron | 15.0% |
| !!! | TTTTTTTTTAGATAACAAGA+GGG | + | chr5_4:40466930-40466949 | Msa0850740:intron | 15.0% |
| !! | GTAATAAATAATTTCTCTAT+TGG | - | chr5_4:40467011-40467030 | None:intergenic | 15.0% |
| !! | AAAAATGAAAAATAGAGAAA+TGG | + | chr5_4:40467348-40467367 | Msa0850740:CDS | 15.0% |
| !! | TATTACTTATTCTCTTGTTA+TGG | + | chr5_4:40465905-40465924 | Msa0850740:CDS | 20.0% |
| !! | ATAGTAGAATTAGAATATTG+TGG | + | chr5_4:40466440-40466459 | Msa0850740:intron | 20.0% |
| !! | AATAAAAAGAGAGCAATATT+CGG | - | chr5_4:40466513-40466532 | None:intergenic | 20.0% |
| !!! | TTTTTATTTCTCAAAACTTG+TGG | + | chr5_4:40466525-40466544 | Msa0850740:intron | 20.0% |
| !! | CTAAGAATAGTTATTACATT+TGG | + | chr5_4:40466612-40466631 | Msa0850740:intron | 20.0% |
| !! | AAACTTAAAACCTAAATTGT+GGG | - | chr5_4:40466689-40466708 | None:intergenic | 20.0% |
| !!! | ACCAATTCTATTTTTCTATT+TGG | + | chr5_4:40466763-40466782 | Msa0850740:intron | 20.0% |
| !! | ACCAAATAGAAAAATAGAAT+TGG | - | chr5_4:40466767-40466786 | None:intergenic | 20.0% |
| !!! | GTAATGATGTTATTTTTGTT+TGG | + | chr5_4:40467409-40467428 | Msa0850740:three_prime_UTR | 20.0% |
| !!! | TTTTGAATTGTCAATATTGT+AGG | + | chr5_4:40467445-40467464 | Msa0850740:three_prime_UTR | 20.0% |
| !! | AAAATAGGATAAAATTTGAC+GGG | - | chr5_4:40467540-40467559 | None:intergenic | 20.0% |
| !! | GAAAATAGGATAAAATTTGA+CGG | - | chr5_4:40467541-40467560 | None:intergenic | 20.0% |
| ! | TCTTAACATGTAAAGAAGTA+TGG | - | chr5_4:40465163-40465182 | None:intergenic | 25.0% |
| !! | TTAATTATTTGCTAGAGTAG+AGG | - | chr5_4:40465217-40465236 | None:intergenic | 25.0% |
| !! | GGATTGAATTTAGAATTAGA+AGG | - | chr5_4:40465305-40465324 | None:intergenic | 25.0% |
| !!! | GATTGGTTTTGTTATGATAT+TGG | + | chr5_4:40465815-40465834 | Msa0850740:CDS | 25.0% |
| !! | GATCATAGACAATGATTTTA+AGG | + | chr5_4:40465980-40465999 | Msa0850740:CDS | 25.0% |
| ! | TGTTTATAACAATGATTGGA+GGG | - | chr5_4:40466186-40466205 | None:intergenic | 25.0% |
| ! | TTGTTTATAACAATGATTGG+AGG | - | chr5_4:40466187-40466206 | None:intergenic | 25.0% |
| ! | ATAAAAAGAGAGCAATATTC+GGG | - | chr5_4:40466512-40466531 | None:intergenic | 25.0% |
| ! | TTCCAATTCAATTTACGTAA+AGG | + | chr5_4:40466647-40466666 | Msa0850740:intron | 25.0% |
| ! | ATCCTTTACGTAAATTGAAT+TGG | - | chr5_4:40466652-40466671 | None:intergenic | 25.0% |
| ! | GAAACTTAAAACCTAAATTG+TGG | - | chr5_4:40466690-40466709 | None:intergenic | 25.0% |
| !! | CAAAATGTCTTAATCTTTTG+TGG | - | chr5_4:40467499-40467518 | None:intergenic | 25.0% |
| ! | AAATAGGATAAAATTTGACG+GGG | - | chr5_4:40467539-40467558 | None:intergenic | 25.0% |
| AAGTATAAACGCATTACTAG+TGG | - | chr5_4:40465354-40465373 | None:intergenic | 30.0% | |
| CTAAGGGAATGAGAATTATT+GGG | - | chr5_4:40465431-40465450 | None:intergenic | 30.0% | |
| ! | TATTATTGTTGTTGCCGTTA+GGG | - | chr5_4:40465497-40465516 | None:intergenic | 30.0% |
| ! | TTATTATTGTTGTTGCCGTT+AGG | - | chr5_4:40465498-40465517 | None:intergenic | 30.0% |
| TCTACTAAGGATTATGTGAT+TGG | + | chr5_4:40465798-40465817 | Msa0850740:CDS | 30.0% | |
| TTATAAACCAACTCCAACAA+CGG | - | chr5_4:40465870-40465889 | None:intergenic | 30.0% | |
| AATTGTGAGTGTACAAAGTA+TGG | - | chr5_4:40466048-40466067 | None:intergenic | 30.0% | |
| AATTGTGAGTGTACAAAGTA+TGG | - | chr5_4:40466048-40466067 | None:intergenic | 30.0% | |
| ! | CATTCTAAAGACACACTTAA+TGG | - | chr5_4:40466367-40466386 | None:intergenic | 30.0% |
| TAAAAAGAGAGCAATATTCG+GGG | - | chr5_4:40466511-40466530 | None:intergenic | 30.0% | |
| CTATTCTTAGATTCAATACG+TGG | - | chr5_4:40466602-40466621 | None:intergenic | 30.0% | |
| ! | ATGTGGCAATTTTTCTTCTT+AGG | + | chr5_4:40467136-40467155 | Msa0850740:CDS | 30.0% |
| ACAGCTAAGATTTCAGTTAT+GGG | - | chr5_4:40467226-40467245 | None:intergenic | 30.0% | |
| AACAGCTAAGATTTCAGTTA+TGG | - | chr5_4:40467227-40467246 | None:intergenic | 30.0% | |
| AGAAATTTCAAGCAGAGAAA+GGG | + | chr5_4:40467260-40467279 | Msa0850740:CDS | 30.0% | |
| AGCAAATAATTAACCAGCCA+TGG | + | chr5_4:40465224-40465243 | Msa0850740:exon | 35.0% | |
| AAATAATTAACCAGCCATGG+TGG | + | chr5_4:40465227-40465246 | Msa0850740:exon | 35.0% | |
| AATTCAATCCTCTTAGCCAT+AGG | + | chr5_4:40465315-40465334 | Msa0850740:CDS | 35.0% | |
| ATGCGTTTATACTTCATCCA+TGG | + | chr5_4:40465360-40465379 | Msa0850740:CDS | 35.0% | |
| GCTAAGGGAATGAGAATTAT+TGG | - | chr5_4:40465432-40465451 | None:intergenic | 35.0% | |
| ATTAACGAAGAAGTTGACAC+CGG | - | chr5_4:40465624-40465643 | None:intergenic | 35.0% | |
| !! | TCTATTGTTTTGTTGACCCT+TGG | + | chr5_4:40465723-40465742 | Msa0850740:CDS | 35.0% |
| !! | CTATTGTTTTGTTGACCCTT+GGG | + | chr5_4:40465724-40465743 | Msa0850740:CDS | 35.0% |
| !!! | TGGATTTGTTTTACCGTTGT+TGG | + | chr5_4:40465854-40465873 | Msa0850740:CDS | 35.0% |
| !!! | CTACTTTGTTTTGCGTTGTT+GGG | + | chr5_4:40465955-40465974 | Msa0850740:CDS | 35.0% |
| TGAGACACAGTACATTTGTT+TGG | - | chr5_4:40466337-40466356 | None:intergenic | 35.0% | |
| AAAAAGAGAGCAATATTCGG+GGG | - | chr5_4:40466510-40466529 | None:intergenic | 35.0% | |
| CTAAATTGTGGGACTAAGAT+TGG | - | chr5_4:40466678-40466697 | None:intergenic | 35.0% | |
| CAATCTTAGTCCCACAATTT+AGG | + | chr5_4:40466676-40466695 | Msa0850740:intron | 35.0% | |
| ! | TTTTTCTTCTTAGGAGCGAT+TGG | + | chr5_4:40467145-40467164 | Msa0850740:CDS | 35.0% |
| AATACCAGATAGCAATGAAG+AGG | - | chr5_4:40467185-40467204 | None:intergenic | 35.0% | |
| GAGAAATTTCAAGCAGAGAA+AGG | + | chr5_4:40467259-40467278 | Msa0850740:CDS | 35.0% | |
| GAAATTTCAAGCAGAGAAAG+GGG | + | chr5_4:40467261-40467280 | Msa0850740:CDS | 35.0% | |
| GTGATTGAATGAAGACTTTG+AGG | - | chr5_4:40467379-40467398 | None:intergenic | 35.0% | |
| GCTAACTATTCTTTCCACCA+TGG | - | chr5_4:40465244-40465263 | None:intergenic | 40.0% | |
| CGTTTATACTTCATCCATGG+CGG | + | chr5_4:40465363-40465382 | Msa0850740:CDS | 40.0% | |
| GGGAATGAGAATTATTGGGA+AGG | - | chr5_4:40465427-40465446 | None:intergenic | 40.0% | |
| TGGATGTGAGAAATGGCTAA+GGG | - | chr5_4:40465447-40465466 | None:intergenic | 40.0% | |
| ! | TTTCGTAACGGTAACGGTAA+CGG | - | chr5_4:40465473-40465492 | None:intergenic | 40.0% |
| ! | TAGGGTTTTCGTAACGGTAA+CGG | - | chr5_4:40465479-40465498 | None:intergenic | 40.0% |
| TACCGTTACGAAAACCCTAA+CGG | + | chr5_4:40465480-40465499 | Msa0850740:CDS | 40.0% | |
| ! | ACCACCTTTGTTTATCGCTT+CGG | + | chr5_4:40465536-40465555 | Msa0850740:CDS | 40.0% |
| AAGAAAAAACGCGAAAACCG+CGG | - | chr5_4:40465670-40465689 | None:intergenic | 40.0% | |
| !! | GTTTTGGCACTGAATTCTGA+TGG | + | chr5_4:40465753-40465772 | Msa0850740:CDS | 40.0% |
| ! | ACTTGTTGGTGAGTCTACTA+AGG | + | chr5_4:40465785-40465804 | Msa0850740:CDS | 40.0% |
| ! | TGTTTTACCGTTGTTGGAGT+TGG | + | chr5_4:40465860-40465879 | Msa0850740:CDS | 40.0% |
| !!! | GCTACTTTGTTTTGCGTTGT+TGG | + | chr5_4:40465954-40465973 | Msa0850740:CDS | 40.0% |
| AAAAGAGAGCAATATTCGGG+GGG | - | chr5_4:40466509-40466528 | None:intergenic | 40.0% | |
| !!! | GGTAGTTCTCTCTTTTTTCC+GGG | - | chr5_4:40466962-40466981 | None:intergenic | 40.0% |
| !!! | GGGTAGTTCTCTCTTTTTTC+CGG | - | chr5_4:40466963-40466982 | None:intergenic | 40.0% |
| AACTACCCCTTAACAAAACG+CGG | + | chr5_4:40466975-40466994 | Msa0850740:intron | 40.0% | |
| ! | AATGAGTATTGCGATTTCGC+AGG | + | chr5_4:40467039-40467058 | Msa0850740:intron | 40.0% |
| AAGCAAGGGATTTCAAGCTT+GGG | + | chr5_4:40467074-40467093 | Msa0850740:CDS | 40.0% | |
| AGTACTATGTTGTGCTAGTG+TGG | + | chr5_4:40467104-40467123 | Msa0850740:CDS | 40.0% | |
| ! | TAGTGTGGAGTGCTATAATG+TGG | + | chr5_4:40467119-40467138 | Msa0850740:CDS | 40.0% |
| TTGTGGTCATTCCTCAAGTT+GGG | - | chr5_4:40467482-40467501 | None:intergenic | 40.0% | |
| TTTGTGGTCATTCCTCAAGT+TGG | - | chr5_4:40467483-40467502 | None:intergenic | 40.0% | |
| ACTATTCTTTCCACCATGGC+TGG | - | chr5_4:40465240-40465259 | None:intergenic | 45.0% | |
| CACATGTTCCTATGGCTAAG+AGG | - | chr5_4:40465326-40465345 | None:intergenic | 45.0% | |
| CTCTTAGCCATAGGAACATG+TGG | + | chr5_4:40465324-40465343 | Msa0850740:CDS | 45.0% | |
| TTAGCCATAGGAACATGTGG+TGG | + | chr5_4:40465327-40465346 | Msa0850740:CDS | 45.0% | |
| TTGGGAAGGCAGATGTTTCA+AGG | - | chr5_4:40465413-40465432 | None:intergenic | 45.0% | |
| GTGGATGTGAGAAATGGCTA+AGG | - | chr5_4:40465448-40465467 | None:intergenic | 45.0% | |
| ACGGTTGTGGATGTGAGAAA+TGG | - | chr5_4:40465454-40465473 | None:intergenic | 45.0% | |
| ! | TGCCGTTAGGGTTTTCGTAA+CGG | - | chr5_4:40465485-40465504 | None:intergenic | 45.0% |
| ACTGCCGAAGCGATAAACAA+AGG | - | chr5_4:40465543-40465562 | None:intergenic | 45.0% | |
| TTTATCGCTTCGGCAGTCAT+CGG | + | chr5_4:40465546-40465565 | Msa0850740:CDS | 45.0% | |
| GTAGAGGTAGTCGTCTAAAC+CGG | - | chr5_4:40465580-40465599 | None:intergenic | 45.0% | |
| TGCCAAAACAACACTCCCAA+GGG | - | chr5_4:40465742-40465761 | None:intergenic | 45.0% | |
| ! | TTGGCACTGAATTCTGATGG+TGG | + | chr5_4:40465756-40465775 | Msa0850740:CDS | 45.0% |
| !! | GATGGTGGAGATAGACTTGT+TGG | + | chr5_4:40465771-40465790 | Msa0850740:CDS | 45.0% |
| !! | TTGGCTTCTGCTGCTTTGTA+TGG | + | chr5_4:40465834-40465853 | Msa0850740:CDS | 45.0% |
| !!! | TCTCTCTTTTTTCCGGGCTA+GGG | - | chr5_4:40466956-40466975 | None:intergenic | 45.0% |
| !!! | TTCTCTCTTTTTTCCGGGCT+AGG | - | chr5_4:40466957-40466976 | None:intergenic | 45.0% |
| !! | TCGACTCCGCGTTTTGTTAA+GGG | - | chr5_4:40466984-40467003 | None:intergenic | 45.0% |
| !! | TTCGACTCCGCGTTTTGTTA+AGG | - | chr5_4:40466985-40467004 | None:intergenic | 45.0% |
| GATTTCGCAGGTGATTCCAA+GGG | + | chr5_4:40467051-40467070 | Msa0850740:intron | 45.0% | |
| TTGAAATCCCTTGCTTCCCT+TGG | - | chr5_4:40467070-40467089 | None:intergenic | 45.0% | |
| GAAGCAAGGGATTTCAAGCT+TGG | + | chr5_4:40467073-40467092 | Msa0850740:CDS | 45.0% | |
| AGCAAGGGATTTCAAGCTTG+GGG | + | chr5_4:40467075-40467094 | Msa0850740:CDS | 45.0% | |
| TGTGCCTCTTCATTGCTATC+TGG | + | chr5_4:40467178-40467197 | Msa0850740:CDS | 45.0% | |
| !! | TTGCTTTGGTGCTCTCACTT+TGG | + | chr5_4:40467284-40467303 | Msa0850740:CDS | 45.0% |
| !! | TGCTTTGGTGCTCTCACTTT+GGG | + | chr5_4:40467285-40467304 | Msa0850740:CDS | 45.0% |
| !! | CTAGCTTTGTACCCAACTTG+AGG | + | chr5_4:40467468-40467487 | Msa0850740:three_prime_UTR | 45.0% |
| !! | ATGTTTAATTAATATTTAAT+TGG | - | chr5_4:40466862-40466881 | None:intergenic | 5.0% |
| TGGTCCACCACATGTTCCTA+TGG | - | chr5_4:40465334-40465353 | None:intergenic | 50.0% | |
| ! | AACGGTAACGGTAACGGTTG+TGG | - | chr5_4:40465467-40465486 | None:intergenic | 50.0% |
| GCCGAAGCGATAAACAAAGG+TGG | - | chr5_4:40465540-40465559 | None:intergenic | 50.0% | |
| ! | CTCACACTTAGCTTTCACCG+CGG | + | chr5_4:40465650-40465669 | Msa0850740:CDS | 50.0% |
| !!! | GACCCTTGGGAGTGTTGTTT+TGG | + | chr5_4:40465737-40465756 | Msa0850740:CDS | 50.0% |
| GTGCCAAAACAACACTCCCA+AGG | - | chr5_4:40465743-40465762 | None:intergenic | 50.0% | |
| !! | CGACTCCGCGTTTTGTTAAG+GGG | - | chr5_4:40466983-40467002 | None:intergenic | 50.0% |
| CGATTTCGCAGGTGATTCCA+AGG | + | chr5_4:40467050-40467069 | Msa0850740:intron | 50.0% | |
| AGGTGATTCCAAGGGAAGCA+AGG | + | chr5_4:40467059-40467078 | Msa0850740:intron | 50.0% | |
| GGTGATTCCAAGGGAAGCAA+GGG | + | chr5_4:40467060-40467079 | Msa0850740:intron | 50.0% | |
| AGCAGAGAAAGGGGTTGCTT+TGG | + | chr5_4:40467270-40467289 | Msa0850740:CDS | 50.0% | |
| !! | GCTTTGGTGCTCTCACTTTG+GGG | + | chr5_4:40467286-40467305 | Msa0850740:CDS | 50.0% |
| GACGGGGTACAACAATCAGA+GGG | - | chr5_4:40467523-40467542 | None:intergenic | 50.0% | |
| TGACGGGGTACAACAATCAG+AGG | - | chr5_4:40467524-40467543 | None:intergenic | 50.0% | |
| TCCATGGCGGCAAACGTGTA+TGG | + | chr5_4:40465376-40465395 | Msa0850740:CDS | 55.0% | |
| GCAGTCATCGGAGTTCTCAC+CGG | + | chr5_4:40465558-40465577 | Msa0850740:CDS | 55.0% | |
| ! | CTGCGGCATAAAGCGTCTAC+CGG | + | chr5_4:40465602-40465621 | Msa0850740:CDS | 55.0% |
| CGCGGTGAAAGCTAAGTGTG+AGG | - | chr5_4:40465652-40465671 | None:intergenic | 55.0% | |
| ATAACAAGAGGGCCCTAGCC+CGG | + | chr5_4:40466941-40466960 | Msa0850740:intron | 55.0% | |
| GCCATACACGTTTGCCGCCA+TGG | - | chr5_4:40465380-40465399 | None:intergenic | 60.0% | |
| GACGACTACCTCTACGCCTG+CGG | + | chr5_4:40465585-40465604 | Msa0850740:CDS | 60.0% | |
| GCTTTATGCCGCAGGCGTAG+AGG | - | chr5_4:40465596-40465615 | None:intergenic | 60.0% | |
| CGGTAGACGCTTTATGCCGC+AGG | - | chr5_4:40465604-40465623 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 40465126 | 40467593 | 40465126 | ID=Msa0850740;Name=Msa0850740 |
| chr5_4 | mRNA | 40465126 | 40467593 | 40465126 | ID=Msa0850740-mRNA-1;Parent=Msa0850740;Name=Msa0850740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=117|1|1|1|1|1|2|191|366 |
| chr5_4 | exon | 40465126 | 40466001 | 40465126 | ID=Msa0850740-mRNA-1:exon:12746;Parent=Msa0850740-mRNA-1 |
| chr5_4 | exon | 40467061 | 40467593 | 40467061 | ID=Msa0850740-mRNA-1:exon:12747;Parent=Msa0850740-mRNA-1 |
| chr5_4 | five_prime_UTR | 40465126 | 40465242 | 40465126 | ID=Msa0850740-mRNA-1:five_prime_utr;Parent=Msa0850740-mRNA-1 |
| chr5_4 | CDS | 40465243 | 40466001 | 40465243 | ID=Msa0850740-mRNA-1:cds;Parent=Msa0850740-mRNA-1 |
| chr5_4 | CDS | 40467061 | 40467402 | 40467061 | ID=Msa0850740-mRNA-1:cds;Parent=Msa0850740-mRNA-1 |
| chr5_4 | three_prime_UTR | 40467403 | 40467593 | 40467403 | ID=Msa0850740-mRNA-1:three_prime_utr;Parent=Msa0850740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
