AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1283120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1283120 MtrunA17_Chr8g0354891 92.041 490 10 3 1 467 1 484 0.0 907
Msa1283120 MtrunA17_Chr8g0354841 80.992 484 63 3 7 467 3 480 0.0 805
Msa1283120 MtrunA17_Chr8g0354851 79.523 503 55 4 7 467 3 499 0.0 805
Msa1283120 MtrunA17_Chr8g0354831 74.239 493 95 4 1 467 1 487 0.0 756
Msa1283120 MtrunA17_Chr3g0080421 64.980 494 139 5 1 467 1 487 0.0 659
Msa1283120 MtrunA17_Chr3g0080431 61.203 482 152 5 4 459 2 474 0.0 573
Msa1283120 MtrunA17_Chr8g0364441 59.499 479 121 5 1 436 1 449 0.0 566
Msa1283120 MtrunA17_Chr8g0354861 80.198 303 39 2 149 436 4 300 5.17e-174 490
Msa1283120 MtrunA17_Chr3g0123421 70.335 209 61 1 1 209 1 208 3.08e-99 296
Msa1283120 MtrunA17_Chr3g0123441 58.716 109 30 1 344 437 1 109 1.64e-35 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1283120 AT5G13750.1 53.498 486 192 7 1 460 1 478 0.0 524
Msa1283120 AT5G13740.1 50.710 493 203 6 1 460 1 486 1.23e-172 494
Msa1283120 AT5G13740.2 52.339 449 182 5 1 424 1 442 4.74e-166 476
Msa1283120 AT3G43790.1 48.247 485 214 5 1 457 1 476 2.90e-165 475
Msa1283120 AT3G43790.4 48.247 485 214 5 1 457 1 476 2.90e-165 475
Msa1283120 AT3G43790.2 47.658 491 214 5 1 457 1 482 3.78e-164 472
Msa1283120 AT3G43790.3 47.658 491 214 5 1 457 1 482 3.78e-164 472
Msa1283120 AT5G13750.3 53.598 403 176 5 1 400 1 395 4.33e-155 446
Msa1283120 AT5G13750.4 53.598 403 176 5 1 400 1 395 4.33e-155 446
Msa1283120 AT5G13750.2 53.518 398 153 5 89 460 1 392 5.10e-148 428
Msa1283120 AT3G43790.5 49.624 399 187 3 1 394 1 390 2.55e-142 414
Msa1283120 AT5G13940.2 41.558 77 29 1 278 354 11 71 2.20e-13 72.8
Msa1283120 AT5G13940.1 41.558 77 29 1 278 354 162 222 2.94e-13 72.8

Find 126 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCCCTTCCTTTATTTCA+TGG 0.165001 8_3:+24426167 Msa1283120:CDS
GGTGATGTTCTTTCAATTTC+AGG 0.192163 8_3:+24428825 Msa1283120:CDS
CCCAGCAATAGGAGGCTATT+TGG 0.240770 8_3:+24427630 Msa1283120:CDS
AGTTACTATGCTGGTTATAT+TGG 0.247965 8_3:+24426956 Msa1283120:CDS
TTTCTTCTTGGAGGTTTAAA+TGG 0.257123 8_3:+24427318 Msa1283120:CDS
TATTTCCAAAAGACTCCTTT+TGG 0.262117 8_3:+24427925 Msa1283120:CDS
CGAAAACCTGTATTAATAAT+GGG 0.292773 8_3:+24427132 Msa1283120:CDS
TTCCATTAGCTGCCCCTCTT+TGG 0.304002 8_3:-24429522 None:intergenic
CTGTTAGTCCTCTGAGGCTA+GGG 0.304962 8_3:+24428775 Msa1283120:CDS
GCCAAATAGCCTCCTATTGC+TGG 0.306470 8_3:-24427631 None:intergenic
TCGAAAACCTGTATTAATAA+TGG 0.307777 8_3:+24427131 Msa1283120:CDS
GTAAAGCAGGGCAAGAAGTA+TGG 0.308634 8_3:-24428066 None:intergenic
TTATCCCAAAAGGAGTCTTT+TGG 0.310679 8_3:-24427930 None:intergenic
CTTATGTATGTCAGAGAAAT+CGG 0.312310 8_3:-24425451 None:intergenic
GATGTTTCACAGCTGTATTA+TGG 0.319545 8_3:+24427085 Msa1283120:CDS
TATAATCAAAAGCTTTATAA+TGG 0.339598 8_3:-24425818 None:intergenic
CAAGTCCTTCAACTAAATTA+AGG 0.344503 8_3:-24430512 None:intergenic
TTGATGTGTAAACCATTTCT+TGG 0.346056 8_3:+24430543 Msa1283120:CDS
ATTGTCCTGGCCCGCATCAC+AGG 0.349215 8_3:+24429003 Msa1283120:CDS
AATACTAATCACAATGTATA+AGG 0.356429 8_3:-24429170 None:intergenic
CGAGAAGAGCACCAAGCTAT+AGG 0.358397 8_3:+24427477 Msa1283120:CDS
CTTAATTTAGTTGAAGGACT+TGG 0.359089 8_3:+24430513 Msa1283120:CDS
ATTTCAGGTTAGTGCAGCTT+GGG 0.360083 8_3:+24427588 Msa1283120:intron
GCAATGATAGATGACATTAA+AGG 0.367674 8_3:-24428597 None:intergenic
ATGTTTCACAGCTGTATTAT+GGG 0.376227 8_3:+24427086 Msa1283120:CDS
TTAATTGTTGGCCCAGCAAT+AGG 0.378147 8_3:+24427619 Msa1283120:CDS
ATTATGATATGTACCTTAAC+TGG 0.378185 8_3:-24427351 None:intergenic
ATAAACTCACCATGAAATAA+AGG 0.383235 8_3:-24426176 None:intergenic
TTCTTCCTTAATTTAGTTGA+AGG 0.384116 8_3:+24430507 Msa1283120:CDS
ATAATCCCCATTATTAATAC+AGG 0.384478 8_3:-24427138 None:intergenic
GAATGGGAATGAACAACAAT+AGG 0.385535 8_3:-24425491 None:intergenic
CAGTAGCAATCGTCTGCATC+TGG 0.388520 8_3:+24428109 Msa1283120:CDS
TTACAGCAATAACATTCTTA+AGG 0.400756 8_3:-24429201 None:intergenic
CACATTATTCGGCCTTAGTA+CGG 0.407588 8_3:+24427269 Msa1283120:CDS
CACCAAAGAGGGGCAGCTAA+TGG 0.408771 8_3:+24429520 Msa1283120:CDS
CACTTTCCCTTGCGTACGCA+TGG 0.409903 8_3:+24430615 Msa1283120:three_prime_UTR
GCTGTTAGTCCTCTGAGGCT+AGG 0.410758 8_3:+24428774 Msa1283120:CDS
GTTAGTGCAGCTTGGGGCAT+AGG 0.410852 8_3:+24427595 Msa1283120:CDS
GTTTATAATGAATAGACATA+TGG 0.413569 8_3:-24430736 None:intergenic
ATTGTCACGAGATTTCTTCT+TGG 0.416074 8_3:+24427306 Msa1283120:CDS
GTGATGCGGGCCAGGACAAT+AGG 0.418432 8_3:-24429000 None:intergenic
ATTTGTGGGTATTTGTCTAC+AGG 0.428406 8_3:-24427903 None:intergenic
CTTGTTAATACAGATTAACT+TGG 0.431693 8_3:+24429725 Msa1283120:intron
TGGCGTGCTTGGACCAGTTA+AGG 0.432244 8_3:+24427338 Msa1283120:CDS
GTCACGAGATTTCTTCTTGG+AGG 0.433230 8_3:+24427309 Msa1283120:CDS
ACAGTTCCGTGAGAAACTTA+TGG 0.436794 8_3:-24425522 None:intergenic
TGGGGCATAGGTTTAATTGT+TGG 0.442160 8_3:+24427607 Msa1283120:CDS
CACAGCTGTATTATGGGGAA+TGG 0.442320 8_3:+24427092 Msa1283120:CDS
GGAGGTTTAAATGGCGTGCT+TGG 0.443737 8_3:+24427327 Msa1283120:CDS
AACAGGAACAACACCAAAGA+GGG 0.450572 8_3:+24429509 Msa1283120:intron
CCCTTCATAGCAATGTTGTC+AGG 0.454765 8_3:+24429142 Msa1283120:CDS
GATTTCAGGTTAGTGCAGCT+TGG 0.458361 8_3:+24427587 Msa1283120:intron
CAAATTAATATGTTGTCATA+AGG 0.460469 8_3:+24430697 Msa1283120:three_prime_UTR
AATCGTCTGCATCTGGATTC+CGG 0.461539 8_3:+24428116 Msa1283120:CDS
AGCAATAACATTCTTAAGGA+TGG 0.463454 8_3:-24429197 None:intergenic
GCCTGACAACATTGCTATGA+AGG 0.464502 8_3:-24429143 None:intergenic
TGGGTCAATTTGTTTAATGT+AGG 0.472473 8_3:+24430635 Msa1283120:three_prime_UTR
AAAGCTGTTGGACCTGCTGC+TGG 0.472813 8_3:+24429571 Msa1283120:CDS
AAGGGGTAACTTTGCAAAAG+TGG 0.475663 8_3:-24429124 None:intergenic
TTGTCCTGGCCCGCATCACA+GGG 0.478766 8_3:+24429004 Msa1283120:CDS
AAAACTTACCCCTGTGATGC+GGG 0.480200 8_3:-24429013 None:intergenic
AACTTATGGAGCTCAATGAA+TGG 0.482625 8_3:-24425508 None:intergenic
TGAGGATTGTCCTGGTTGTA+AGG 0.488764 8_3:+24425762 Msa1283120:CDS
TTATGTATGTCAGAGAAATC+GGG 0.492652 8_3:-24425450 None:intergenic
ACTTATGGAGCTCAATGAAT+GGG 0.493475 8_3:-24425507 None:intergenic
AAGTGCTGATATTGTAAAGC+AGG 0.496000 8_3:-24428079 None:intergenic
CATATGGGTATATGAAAAGT+TGG 0.496107 8_3:-24428960 None:intergenic
TTTAACTGCAGGAACTCAAA+TGG 0.496682 8_3:+24430479 Msa1283120:intron
ACATTATTCGGCCTTAGTAC+GGG 0.508387 8_3:+24427270 Msa1283120:CDS
CATAAGGTGCATGTGAGACT+AGG 0.510437 8_3:+24425468 Msa1283120:five_prime_UTR
GCTGATATTAGTTACTATGC+TGG 0.515027 8_3:+24426947 Msa1283120:CDS
CGATTTCTCTGACATACATA+AGG 0.518399 8_3:+24425452 Msa1283120:five_prime_UTR
TATTGCTTCTTCTCCAACAA+TGG 0.519872 8_3:-24425736 None:intergenic
GCATATGAGAGAGCCATTGT+TGG 0.520685 8_3:+24425723 Msa1283120:CDS
GTACACTTACTTATCCCAAA+AGG 0.520784 8_3:-24427940 None:intergenic
TGTTAGTCCTCTGAGGCTAG+GGG 0.525174 8_3:+24428776 Msa1283120:CDS
CAAGCAAATGAGCTTAATGA+AGG 0.529098 8_3:+24425790 Msa1283120:CDS
GTAACTTTGCAAAAGTGGTA+TGG 0.530998 8_3:-24429119 None:intergenic
TACGCAAGGGAAAGTGATAT+AGG 0.531018 8_3:-24430608 None:intergenic
GTAGGATCTTCATACATGCT+TGG 0.532534 8_3:+24427060 Msa1283120:intron
TAAAGCAGGGCAAGAAGTAT+GGG 0.534775 8_3:-24428065 None:intergenic
AAGGGAAAGAGAGATGATGT+AGG 0.538040 8_3:-24426153 None:intergenic
CCTGACAACATTGCTATGAA+GGG 0.540798 8_3:-24429142 None:intergenic
ATAGCTATTAAACTATCCAC+AGG 0.547902 8_3:+24428458 Msa1283120:intron
GATGCCGAAGCTTTAGAAAA+CGG 0.551292 8_3:+24428522 Msa1283120:CDS
AGCTTGTGGACCTATTGTCC+TGG 0.553296 8_3:+24428990 Msa1283120:CDS
ACTTTCCCTTGCGTACGCAT+GGG 0.553296 8_3:+24430616 Msa1283120:three_prime_UTR
AATAGGAGGCTATTTGGCTC+AGG 0.557652 8_3:+24427636 Msa1283120:CDS
AATTGACCCATGCGTACGCA+AGG 0.557948 8_3:-24430622 None:intergenic
CCAAATAGCCTCCTATTGCT+GGG 0.558164 8_3:-24427630 None:intergenic
CAATACTATGAGGATTGTCC+TGG 0.559637 8_3:+24425754 Msa1283120:CDS
ATGTCTCTATTCAAAGCTGT+TGG 0.560681 8_3:+24429559 Msa1283120:CDS
TAGTCTAGCTATTTAAGATG+AGG 0.567117 8_3:-24425410 None:intergenic
CACATTGTACCACCAGCAGC+AGG 0.570958 8_3:-24429583 None:intergenic
TCATGATATTGCTTATCAAG+AGG 0.578973 8_3:+24428638 Msa1283120:CDS
TTCTGTAACAAACATGGAGG+AGG 0.580200 8_3:+24425699 Msa1283120:exon
AAATCGGGGTTTGCAAGATG+AGG 0.580732 8_3:-24425435 None:intergenic
ACTCACCATGAAATAAAGGA+AGG 0.582200 8_3:-24426172 None:intergenic
CGGTAGAAAGTCCTATAGCT+TGG 0.583615 8_3:-24427488 None:intergenic
ATTGTTGGCCCAGCAATAGG+AGG 0.585894 8_3:+24427622 Msa1283120:CDS
AAACAGGAACAACACCAAAG+AGG 0.593747 8_3:+24429508 Msa1283120:intron
GGAGAAGAAGCAATACTATG+AGG 0.594400 8_3:+24425744 Msa1283120:CDS
CTCACCATGAAATAAAGGAA+GGG 0.600349 8_3:-24426171 None:intergenic
AATGGTAGCGAAGAGTTCAA+AGG 0.606460 8_3:+24428498 Msa1283120:CDS
GAAAACTTACCCCTGTGATG+CGG 0.607952 8_3:-24429014 None:intergenic
GTTAGTCCTCTGAGGCTAGG+GGG 0.610530 8_3:+24428777 Msa1283120:CDS
GAAAACCTGTATTAATAATG+GGG 0.613201 8_3:+24427133 Msa1283120:CDS
TGTTTCACAGCTGTATTATG+GGG 0.615339 8_3:+24427087 Msa1283120:CDS
AAGTTTACAACTGATGATGT+TGG 0.618360 8_3:+24428804 Msa1283120:CDS
ACATATGGTTAAGAAGAAAG+AGG 0.618775 8_3:-24430721 None:intergenic
TGAGCTCCATAAGTTTCTCA+CGG 0.624569 8_3:+24425516 Msa1283120:five_prime_UTR
TTTCAGGTTAGTGCAGCTTG+GGG 0.625652 8_3:+24427589 Msa1283120:intron
TGATTGTGAAGTGTTTCCTG+TGG 0.634657 8_3:-24428474 None:intergenic
ATTGAATTCTGTAACAAACA+TGG 0.635180 8_3:+24425693 Msa1283120:exon
GCTTGTTCGACCTTACAACC+AGG 0.635854 8_3:-24425772 None:intergenic
GCTGTTGGACCTGCTGCTGG+TGG 0.638330 8_3:+24429574 Msa1283120:CDS
AGTGCTGATATTGTAAAGCA+GGG 0.641165 8_3:-24428078 None:intergenic
TATGTATGTCAGAGAAATCG+GGG 0.649196 8_3:-24425449 None:intergenic
TATGGGCTGTTAGTCCTCTG+AGG 0.652036 8_3:+24428769 Msa1283120:CDS
CTGACAACATTGCTATGAAG+GGG 0.657130 8_3:-24429141 None:intergenic
ATTGACCCATGCGTACGCAA+GGG 0.657339 8_3:-24430621 None:intergenic
GGAATGGTTTCAGATCGCTA+TGG 0.663331 8_3:+24427108 Msa1283120:CDS
GAAACACTTCACAATCACAA+TGG 0.685991 8_3:+24428480 Msa1283120:CDS
ACAGGAACAACACCAAAGAG+GGG 0.717818 8_3:+24429510 Msa1283120:intron
GAATTCTGTAACAAACATGG+AGG 0.737814 8_3:+24425696 Msa1283120:exon
TGTCCTGGCCCGCATCACAG+GGG 0.765570 8_3:+24429005 Msa1283120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATAATATCATTTAAAT+TGG - chr8_3:24428304-24428323 None:intergenic 10.0%
!! ATTCTAATAATTAATTGAAA+CGG + chr8_3:24428340-24428359 Msa1283120:intron 10.0%
!!! TTTTAATTTATATGAATTCA+AGG - chr8_3:24428713-24428732 None:intergenic 10.0%
!!! CAATAAATATTTATGATTTT+TGG - chr8_3:24429845-24429864 None:intergenic 10.0%
!! TACTAAATATATGTTATAAA+TGG + chr8_3:24430079-24430098 Msa1283120:intron 10.0%
!! TAAAAATAGAAATTATGTAT+TGG - chr8_3:24430279-24430298 None:intergenic 10.0%
!!! TATAATCAAAAGCTTTATAA+TGG - chr8_3:24425821-24425840 None:intergenic 15.0%
!!! TTATAAAGCTTTTGATTATA+TGG + chr8_3:24425821-24425840 Msa1283120:CDS 15.0%
!!! CAATTAATTTTGACAAAAAT+TGG + chr8_3:24426468-24426487 Msa1283120:intron 15.0%
!! ATATTCATTTCTTAAAATAC+TGG - chr8_3:24426690-24426709 None:intergenic 15.0%
!!! ATAATGCAACATTTATTTTT+AGG + chr8_3:24426895-24426914 Msa1283120:intron 15.0%
!! AAAACTAAATAATTCAACTT+TGG + chr8_3:24427985-24428004 Msa1283120:intron 15.0%
!!! TATTGTTATTTCAATTTTGA+AGG + chr8_3:24428040-24428059 Msa1283120:intron 15.0%
!! AGGTAAATTTCTAATTATTT+AGG + chr8_3:24428658-24428677 Msa1283120:intron 15.0%
!!! CTAATTATTTAGGTTAAAAA+TGG + chr8_3:24428668-24428687 Msa1283120:intron 15.0%
!! CATTGATACATATTTATTAT+AGG - chr8_3:24428864-24428883 None:intergenic 15.0%
!! AATAAATATGTATCAATGTT+TGG + chr8_3:24428866-24428885 Msa1283120:intron 15.0%
!! ACTCTTTGAATTATATTTAA+TGG + chr8_3:24429306-24429325 Msa1283120:intron 15.0%
!! TATTAATATCAAAATTTACG+AGG - chr8_3:24429457-24429476 None:intergenic 15.0%
!! TTGATATTAATAGTTGTTTA+TGG + chr8_3:24429465-24429484 Msa1283120:intron 15.0%
!!! CAACTTTTTGAAAAATAAAT+CGG + chr8_3:24429880-24429899 Msa1283120:intron 15.0%
!! CATTTAATATACCAAATTTA+AGG + chr8_3:24430381-24430400 Msa1283120:intron 15.0%
!!! ATTTATGAAAGATAGTGTTT+TGG - chr8_3:24425604-24425623 None:intergenic 20.0%
!! TCACTTTATATGAAATATGA+AGG - chr8_3:24425652-24425671 None:intergenic 20.0%
!! TGATATATAGAAAAAAGAGA+AGG + chr8_3:24425669-24425688 Msa1283120:five_prime_UTR 20.0%
!!! TGACATTTGTTATTTCTTAA+AGG + chr8_3:24426249-24426268 Msa1283120:intron 20.0%
!!! AAATCTTTTGAAATGAAAGA+CGG - chr8_3:24426549-24426568 None:intergenic 20.0%
!! TTATTCATCATTCTTGTATA+TGG + chr8_3:24426721-24426740 Msa1283120:intron 20.0%
!!! CAACATTTATTTTTAGGTAA+GGG + chr8_3:24426901-24426920 Msa1283120:intron 20.0%
!! TGATAAAAGACTTAAATGAA+TGG - chr8_3:24427002-24427021 None:intergenic 20.0%
!! AGTAAAACATGAATAATTGT+GGG - chr8_3:24427228-24427247 None:intergenic 20.0%
!! AAGTAAAACATGAATAATTG+TGG - chr8_3:24427229-24427248 None:intergenic 20.0%
!! ATGTATAGGTAAAGATTATA+AGG - chr8_3:24428246-24428265 None:intergenic 20.0%
!!! AAAAGAGATTTTCATTCTTT+TGG - chr8_3:24428569-24428588 None:intergenic 20.0%
!!! ATGAAAATCTCTTTTTGAAT+TGG + chr8_3:24428574-24428593 Msa1283120:CDS 20.0%
!!! TACTAACTTGTGAAATTATT+AGG + chr8_3:24428919-24428938 Msa1283120:intron 20.0%
!! TGAAATATGTTATGTTACTA+TGG + chr8_3:24429074-24429093 Msa1283120:intron 20.0%
!! AATACTAATCACAATGTATA+AGG - chr8_3:24429173-24429192 None:intergenic 20.0%
!!! CAATCAATTAAACTGAATTT+TGG - chr8_3:24429258-24429277 None:intergenic 20.0%
!!! CTGAATTTTAGAATTTAAGT+CGG + chr8_3:24430227-24430246 Msa1283120:intron 20.0%
!!! TGAATTTTAGAATTTAAGTC+GGG + chr8_3:24430228-24430247 Msa1283120:intron 20.0%
!! TTGGTATATTAAATGTTACA+AGG - chr8_3:24430376-24430395 None:intergenic 20.0%
!! AGCAAAAATATCCTTAAATT+TGG - chr8_3:24430395-24430414 None:intergenic 20.0%
!! CAAATTAATATGTTGTCATA+AGG + chr8_3:24430697-24430716 Msa1283120:three_prime_UTR 20.0%
! ATTGAATTCTGTAACAAACA+TGG + chr8_3:24425693-24425712 Msa1283120:exon 25.0%
!!! AAAGCTTTTGATTATATGGA+TGG + chr8_3:24425825-24425844 Msa1283120:CDS 25.0%
!!! TTTCTTAATTTGTTGTGTCA+CGG + chr8_3:24426015-24426034 Msa1283120:intron 25.0%
! CCTTACATAACTTATTCAAA+AGG - chr8_3:24426047-24426066 None:intergenic 25.0%
!! CCTTTTGAATAAGTTATGTA+AGG + chr8_3:24426044-24426063 Msa1283120:intron 25.0%
! ATAAACTCACCATGAAATAA+AGG - chr8_3:24426179-24426198 None:intergenic 25.0%
!!! ATTTTGACAAAAATTGGAGA+AGG + chr8_3:24426474-24426493 Msa1283120:intron 25.0%
!! TTTTGACAAAAATTGGAGAA+GGG + chr8_3:24426475-24426494 Msa1283120:intron 25.0%
! ATCATGGACAAAATTATTTG+TGG + chr8_3:24426623-24426642 Msa1283120:intron 25.0%
! TAAAATACTGGAAAAGACTA+GGG - chr8_3:24426678-24426697 None:intergenic 25.0%
! TTAAAATACTGGAAAAGACT+AGG - chr8_3:24426679-24426698 None:intergenic 25.0%
! GAAACAAGAAATTTACATCA+TGG - chr8_3:24426769-24426788 None:intergenic 25.0%
! ACAAGATATGACAAAACAAA+AGG - chr8_3:24426803-24426822 None:intergenic 25.0%
!!! GCAACATTTATTTTTAGGTA+AGG + chr8_3:24426900-24426919 Msa1283120:intron 25.0%
! TCGAAAACCTGTATTAATAA+TGG + chr8_3:24427131-24427150 Msa1283120:CDS 25.0%
! CGAAAACCTGTATTAATAAT+GGG + chr8_3:24427132-24427151 Msa1283120:CDS 25.0%
! GAAAACCTGTATTAATAATG+GGG + chr8_3:24427133-24427152 Msa1283120:CDS 25.0%
! ATAATCCCCATTATTAATAC+AGG - chr8_3:24427141-24427160 None:intergenic 25.0%
!!! GTCATTTTCAACACATTATT+CGG + chr8_3:24427258-24427277 Msa1283120:CDS 25.0%
! ATTATGATATGTACCTTAAC+TGG - chr8_3:24427354-24427373 None:intergenic 25.0%
! CACACTTTGAATTATTATGA+TGG - chr8_3:24427563-24427582 None:intergenic 25.0%
!! TGCATTATTTGAAATGCATT+TGG + chr8_3:24427737-24427756 Msa1283120:intron 25.0%
!!! AGTCTTTTGGAAATATTTGT+GGG - chr8_3:24427920-24427939 None:intergenic 25.0%
! ATCTTTACCTATACATAAAG+AGG + chr8_3:24428250-24428269 Msa1283120:intron 25.0%
!!! TTCTTTAGGTTTTCTCATTA+TGG + chr8_3:24428751-24428770 Msa1283120:intron 25.0%
!!! TCTTTAGGTTTTCTCATTAT+GGG + chr8_3:24428752-24428771 Msa1283120:intron 25.0%
! TTACAGCAATAACATTCTTA+AGG - chr8_3:24429204-24429223 None:intergenic 25.0%
!!! TATATTTAATGGACTGACTT+AGG + chr8_3:24429317-24429336 Msa1283120:intron 25.0%
! CAAAACACAATTAATGAAAG+AGG - chr8_3:24429431-24429450 None:intergenic 25.0%
! CAAGTTAATCTGTATTAACA+AGG - chr8_3:24429727-24429746 None:intergenic 25.0%
! CTTGTTAATACAGATTAACT+TGG + chr8_3:24429725-24429744 Msa1283120:intron 25.0%
!!! CGACTTAAATTCTAAAATTC+AGG - chr8_3:24430229-24430248 None:intergenic 25.0%
! TTCTTCCTTAATTTAGTTGA+AGG + chr8_3:24430507-24430526 Msa1283120:CDS 25.0%
! TAGTCTAGCTATTTAAGATG+AGG - chr8_3:24425413-24425432 None:intergenic 30.0%
TTATGTATGTCAGAGAAATC+GGG - chr8_3:24425453-24425472 None:intergenic 30.0%
CTTATGTATGTCAGAGAAAT+CGG - chr8_3:24425454-24425473 None:intergenic 30.0%
AAGAACAATGATTCTACAAG+TGG - chr8_3:24425899-24425918 None:intergenic 30.0%
ACTGTTCTATGTTCTTAGTA+CGG + chr8_3:24425978-24425997 Msa1283120:intron 30.0%
!! TTCTTAATTTGTTGTGTCAC+GGG + chr8_3:24426016-24426035 Msa1283120:intron 30.0%
AGTTAGATAGAGAAGAACAA+AGG - chr8_3:24426107-24426126 None:intergenic 30.0%
! TGTGGTTAATAATTTTCCTC+TGG + chr8_3:24426641-24426660 Msa1283120:intron 30.0%
TTGTATATGGTACAAGCAAT+TGG + chr8_3:24426734-24426753 Msa1283120:intron 30.0%
GAAATTTACATCATGGTTCA+TGG - chr8_3:24426762-24426781 None:intergenic 30.0%
! AGTTACTATGCTGGTTATAT+TGG + chr8_3:24426956-24426975 Msa1283120:CDS 30.0%
ATGAAGATTGAAAATGCTGT+AGG + chr8_3:24427042-24427061 Msa1283120:intron 30.0%
ATGTTTCACAGCTGTATTAT+GGG + chr8_3:24427086-24427105 Msa1283120:CDS 30.0%
TTTCTTCTTGGAGGTTTAAA+TGG + chr8_3:24427318-24427337 Msa1283120:CDS 30.0%
AGAAGAATTGTTGAGACTTA+CGG - chr8_3:24427511-24427530 None:intergenic 30.0%
TCAAAGTGTGATATGATTTC+AGG + chr8_3:24427573-24427592 Msa1283120:intron 30.0%
!! GAGTCTTTTGGAAATATTTG+TGG - chr8_3:24427921-24427940 None:intergenic 30.0%
! TATTTCCAAAAGACTCCTTT+TGG + chr8_3:24427925-24427944 Msa1283120:CDS 30.0%
! ATTTCCAAAAGACTCCTTTT+GGG + chr8_3:24427926-24427945 Msa1283120:CDS 30.0%
AACTGATAGAAACACAAGAT+GGG - chr8_3:24428013-24428032 None:intergenic 30.0%
AAACTGATAGAAACACAAGA+TGG - chr8_3:24428014-24428033 None:intergenic 30.0%
ATAACATCTAAGTTGCATAC+CGG - chr8_3:24428138-24428157 None:intergenic 30.0%
!! TTTTTCTGTCTTCTTGTTTG+TGG + chr8_3:24428192-24428211 Msa1283120:intron 30.0%
CTAGTATCCTCTTTATGTAT+AGG - chr8_3:24428260-24428279 None:intergenic 30.0%
ATAGCTATTAAACTATCCAC+AGG + chr8_3:24428458-24428477 Msa1283120:intron 30.0%
GCAATGATAGATGACATTAA+AGG - chr8_3:24428600-24428619 None:intergenic 30.0%
TCATGATATTGCTTATCAAG+AGG + chr8_3:24428638-24428657 Msa1283120:CDS 30.0%
!! CTATTCATGTTGCTTTCTTT+AGG + chr8_3:24428737-24428756 Msa1283120:intron 30.0%
! AAGTTTACAACTGATGATGT+TGG + chr8_3:24428804-24428823 Msa1283120:CDS 30.0%
CATATGGGTATATGAAAAGT+TGG - chr8_3:24428963-24428982 None:intergenic 30.0%
! ACTTTTCATATACCCATATG+TGG + chr8_3:24428963-24428982 Msa1283120:CDS 30.0%
AGCAATAACATTCTTAAGGA+TGG - chr8_3:24429200-24429219 None:intergenic 30.0%
CAAATATACTTACCACTACT+CGG - chr8_3:24429377-24429396 None:intergenic 30.0%
! TTGATGATTGTTCATAGTTG+AGG - chr8_3:24429792-24429811 None:intergenic 30.0%
GAAAAATAAATCGGCACAAA+AGG + chr8_3:24429889-24429908 Msa1283120:intron 30.0%
AAAATTGCAATCAAACTCGA+AGG + chr8_3:24429969-24429988 Msa1283120:intron 30.0%
GACTTCTGTAGAATCAATTT+AGG + chr8_3:24430004-24430023 Msa1283120:intron 30.0%
AAAATCGCAATCAAAATCCA+TGG + chr8_3:24430139-24430158 Msa1283120:intron 30.0%
CCTAAAATAAGCAAAATCCA+TGG - chr8_3:24430159-24430178 None:intergenic 30.0%
!! CCATGGATTTTGCTTATTTT+AGG + chr8_3:24430156-24430175 Msa1283120:intron 30.0%
!!! CTTATTTTAGGATTCTGCTA+TGG + chr8_3:24430168-24430187 Msa1283120:intron 30.0%
CAAGTAATACAGCAAAAGAT+GGG - chr8_3:24430441-24430460 None:intergenic 30.0%
TCAAGTAATACAGCAAAAGA+TGG - chr8_3:24430442-24430461 None:intergenic 30.0%
CAAGTCCTTCAACTAAATTA+AGG - chr8_3:24430515-24430534 None:intergenic 30.0%
CTTAATTTAGTTGAAGGACT+TGG + chr8_3:24430513-24430532 Msa1283120:CDS 30.0%
TTGATGTGTAAACCATTTCT+TGG + chr8_3:24430543-24430562 Msa1283120:CDS 30.0%
! TTCTTCTTTTCACCAAGAAA+TGG - chr8_3:24430558-24430577 None:intergenic 30.0%
! TGGGTCAATTTGTTTAATGT+AGG + chr8_3:24430635-24430654 Msa1283120:three_prime_UTR 30.0%
ACATATGGTTAAGAAGAAAG+AGG - chr8_3:24430724-24430743 None:intergenic 30.0%
TATGTATGTCAGAGAAATCG+GGG - chr8_3:24425452-24425471 None:intergenic 35.0%
CGATTTCTCTGACATACATA+AGG + chr8_3:24425452-24425471 Msa1283120:five_prime_UTR 35.0%
GAATGGGAATGAACAACAAT+AGG - chr8_3:24425494-24425513 None:intergenic 35.0%
ACTTATGGAGCTCAATGAAT+GGG - chr8_3:24425510-24425529 None:intergenic 35.0%
AACTTATGGAGCTCAATGAA+TGG - chr8_3:24425511-24425530 None:intergenic 35.0%
GAATTCTGTAACAAACATGG+AGG + chr8_3:24425696-24425715 Msa1283120:exon 35.0%
TATTGCTTCTTCTCCAACAA+TGG - chr8_3:24425739-24425758 None:intergenic 35.0%
CAAGCAAATGAGCTTAATGA+AGG + chr8_3:24425790-24425809 Msa1283120:CDS 35.0%
!! GCTTTTGATTATATGGATGG+TGG + chr8_3:24425828-24425847 Msa1283120:CDS 35.0%
!! TCTTAATTTGTTGTGTCACG+GGG + chr8_3:24426017-24426036 Msa1283120:intron 35.0%
! AGAGAAGAACAAAGGTACAT+AGG - chr8_3:24426099-24426118 None:intergenic 35.0%
! CTTTCCCTTCCTTTATTTCA+TGG + chr8_3:24426167-24426186 Msa1283120:CDS 35.0%
CTCACCATGAAATAAAGGAA+GGG - chr8_3:24426174-24426193 None:intergenic 35.0%
ACTCACCATGAAATAAAGGA+AGG - chr8_3:24426175-24426194 None:intergenic 35.0%
CATGGTGAGTTTATTTATCC+AGG + chr8_3:24426185-24426204 Msa1283120:intron 35.0%
! GAAAGGTATAGAATAAGTCC+TGG - chr8_3:24426206-24426225 None:intergenic 35.0%
CAGTGTAGTAATCTTGTGAA+AGG - chr8_3:24426223-24426242 None:intergenic 35.0%
! TCTGCACATCAGTTTTTGAA+AGG + chr8_3:24426400-24426419 Msa1283120:intron 35.0%
GCTGATATTAGTTACTATGC+TGG + chr8_3:24426947-24426966 Msa1283120:CDS 35.0%
GATGTTTCACAGCTGTATTA+TGG + chr8_3:24427085-24427104 Msa1283120:CDS 35.0%
TGTTTCACAGCTGTATTATG+GGG + chr8_3:24427087-24427106 Msa1283120:CDS 35.0%
ATTGTCACGAGATTTCTTCT+TGG + chr8_3:24427306-24427325 Msa1283120:CDS 35.0%
TCGAAAAAGTTCAGTAGCAT+AGG - chr8_3:24427460-24427479 None:intergenic 35.0%
ACATTTCCTTTGTGTGTTCT+TGG + chr8_3:24427794-24427813 Msa1283120:intron 35.0%
! TGGCCTATTTTCCTTATAAG+TGG + chr8_3:24427814-24427833 Msa1283120:intron 35.0%
!! GTGCCACTTATAAGGAAAAT+AGG - chr8_3:24427820-24427839 None:intergenic 35.0%
!! ATGAATGTGTGCCACTTATA+AGG - chr8_3:24427828-24427847 None:intergenic 35.0%
ATTTGTGGGTATTTGTCTAC+AGG - chr8_3:24427906-24427925 None:intergenic 35.0%
! TTATCCCAAAAGGAGTCTTT+TGG - chr8_3:24427933-24427952 None:intergenic 35.0%
GTACACTTACTTATCCCAAA+AGG - chr8_3:24427943-24427962 None:intergenic 35.0%
!! AGTGCTGATATTGTAAAGCA+GGG - chr8_3:24428081-24428100 None:intergenic 35.0%
!! AAGTGCTGATATTGTAAAGC+AGG - chr8_3:24428082-24428101 None:intergenic 35.0%
! ATTATAAGGCGTCATCGTAA+AGG - chr8_3:24428232-24428251 None:intergenic 35.0%
GAAACACTTCACAATCACAA+TGG + chr8_3:24428480-24428499 Msa1283120:CDS 35.0%
GGTGATGTTCTTTCAATTTC+AGG + chr8_3:24428825-24428844 Msa1283120:CDS 35.0%
!! CACAAGCTTTTTCCACATAT+GGG - chr8_3:24428978-24428997 None:intergenic 35.0%
GTAACTTTGCAAAAGTGGTA+TGG - chr8_3:24429122-24429141 None:intergenic 35.0%
! ATGGAAGTGTGACATTGATT+TGG + chr8_3:24429484-24429503 Msa1283120:intron 35.0%
!! GTGACATTGATTTGGAAAAC+AGG + chr8_3:24429492-24429511 Msa1283120:intron 35.0%
ATGTCTCTATTCAAAGCTGT+TGG + chr8_3:24429559-24429578 Msa1283120:CDS 35.0%
GCACAAAAGGTTGTCAAAAT+CGG + chr8_3:24429902-24429921 Msa1283120:intron 35.0%
TCGAAAGGGAATAGCAAAAT+CGG + chr8_3:24429939-24429958 Msa1283120:intron 35.0%
! AACTCGAAGGATTTTACTCA+AGG + chr8_3:24429982-24430001 Msa1283120:intron 35.0%
ACTATTGCACATTTAACTGC+AGG + chr8_3:24430468-24430487 Msa1283120:intron 35.0%
TTTAACTGCAGGAACTCAAA+TGG + chr8_3:24430479-24430498 Msa1283120:intron 35.0%
TGAGCTCCATAAGTTTCTCA+CGG + chr8_3:24425516-24425535 Msa1283120:five_prime_UTR 40.0%
ACAGTTCCGTGAGAAACTTA+TGG - chr8_3:24425525-24425544 None:intergenic 40.0%
TTCTGTAACAAACATGGAGG+AGG + chr8_3:24425699-24425718 Msa1283120:exon 40.0%
GGAGAAGAAGCAATACTATG+AGG + chr8_3:24425744-24425763 Msa1283120:CDS 40.0%
CAATACTATGAGGATTGTCC+TGG + chr8_3:24425754-24425773 Msa1283120:CDS 40.0%
! GAACAAAGGTACATAGGACA+TGG - chr8_3:24426093-24426112 None:intergenic 40.0%
AAGGGAAAGAGAGATGATGT+AGG - chr8_3:24426156-24426175 None:intergenic 40.0%
! ACTTGCTAGTTGCTTCTCTA+TGG + chr8_3:24426423-24426442 Msa1283120:intron 40.0%
GCTTGAGATTACATGGTCAA+AGG + chr8_3:24426586-24426605 Msa1283120:intron 40.0%
! TTTTGTCCATGATGTGTCAG+TGG - chr8_3:24426616-24426635 None:intergenic 40.0%
TAGGGAAAATATCGATCCAG+AGG - chr8_3:24426660-24426679 None:intergenic 40.0%
GTAGGATCTTCATACATGCT+TGG + chr8_3:24427060-24427079 Msa1283120:intron 40.0%
CACATTATTCGGCCTTAGTA+CGG + chr8_3:24427269-24427288 Msa1283120:CDS 40.0%
ACATTATTCGGCCTTAGTAC+GGG + chr8_3:24427270-24427289 Msa1283120:CDS 40.0%
GACGAACTTCGTCATTATAC+AGG + chr8_3:24427434-24427453 Msa1283120:intron 40.0%
!! ATTTCAGGTTAGTGCAGCTT+GGG + chr8_3:24427588-24427607 Msa1283120:intron 40.0%
TGGGGCATAGGTTTAATTGT+TGG + chr8_3:24427607-24427626 Msa1283120:CDS 40.0%
TTAATTGTTGGCCCAGCAAT+AGG + chr8_3:24427619-24427638 Msa1283120:CDS 40.0%
AATAGGCCAAGAACACACAA+AGG - chr8_3:24427803-24427822 None:intergenic 40.0%
! TAAAGCAGGGCAAGAAGTAT+GGG - chr8_3:24428068-24428087 None:intergenic 40.0%
! TGATTGTGAAGTGTTTCCTG+TGG - chr8_3:24428477-24428496 None:intergenic 40.0%
! AATGGTAGCGAAGAGTTCAA+AGG + chr8_3:24428498-24428517 Msa1283120:CDS 40.0%
!! GATGCCGAAGCTTTAGAAAA+CGG + chr8_3:24428522-24428541 Msa1283120:CDS 40.0%
!!! GCTTCCGTTTTCTAAAGCTT+CGG - chr8_3:24428529-24428548 None:intergenic 40.0%
!! CCACAAGCTTTTTCCACATA+TGG - chr8_3:24428979-24428998 None:intergenic 40.0%
CCATATGTGGAAAAAGCTTG+TGG + chr8_3:24428976-24428995 Msa1283120:CDS 40.0%
AAGGGGTAACTTTGCAAAAG+TGG - chr8_3:24429127-24429146 None:intergenic 40.0%
CTGACAACATTGCTATGAAG+GGG - chr8_3:24429144-24429163 None:intergenic 40.0%
CCTGACAACATTGCTATGAA+GGG - chr8_3:24429145-24429164 None:intergenic 40.0%
GACTTAGGTGACGATTACAA+CGG + chr8_3:24429332-24429351 Msa1283120:intron 40.0%
ACTTAGGTGACGATTACAAC+GGG + chr8_3:24429333-24429352 Msa1283120:intron 40.0%
AAACAGGAACAACACCAAAG+AGG + chr8_3:24429508-24429527 Msa1283120:intron 40.0%
AACAGGAACAACACCAAAGA+GGG + chr8_3:24429509-24429528 Msa1283120:intron 40.0%
! AACTTGGTCACAAAAGCGTA+TGG + chr8_3:24429741-24429760 Msa1283120:intron 40.0%
TCATAGTTGAGGATCAAACC+TGG - chr8_3:24429781-24429800 None:intergenic 40.0%
! CAAAATCGGTGCTTTACTTC+AGG + chr8_3:24429916-24429935 Msa1283120:intron 40.0%
TGCTTTACTTCAGGTCGAAA+GGG + chr8_3:24429925-24429944 Msa1283120:intron 40.0%
CGAAAGGGAATAGCAAAATC+GGG + chr8_3:24429940-24429959 Msa1283120:intron 40.0%
AAAATCGCAGTCAAAGTCGA+TGG + chr8_3:24430034-24430053 Msa1283120:intron 40.0%
!! GTCGGGATTTTGACAACAAT+AGG + chr8_3:24430245-24430264 Msa1283120:intron 40.0%
TACGCAAGGGAAAGTGATAT+AGG - chr8_3:24430611-24430630 None:intergenic 40.0%
AAATCGGGGTTTGCAAGATG+AGG - chr8_3:24425438-24425457 None:intergenic 45.0%
CATAAGGTGCATGTGAGACT+AGG + chr8_3:24425468-24425487 Msa1283120:five_prime_UTR 45.0%
GCATATGAGAGAGCCATTGT+TGG + chr8_3:24425723-24425742 Msa1283120:CDS 45.0%
TGAGGATTGTCCTGGTTGTA+AGG + chr8_3:24425762-24425781 Msa1283120:CDS 45.0%
GGTACATAGGACATGGCAAT+TGG - chr8_3:24426086-24426105 None:intergenic 45.0%
! CTCTGTCGCTTGAGATTACA+TGG + chr8_3:24426579-24426598 Msa1283120:intron 45.0%
CACAGCTGTATTATGGGGAA+TGG + chr8_3:24427092-24427111 Msa1283120:CDS 45.0%
GGAATGGTTTCAGATCGCTA+TGG + chr8_3:24427108-24427127 Msa1283120:CDS 45.0%
CCATCCAAAAACCCGTACTA+AGG - chr8_3:24427284-24427303 None:intergenic 45.0%
!! CCTTAGTACGGGTTTTTGGA+TGG + chr8_3:24427281-24427300 Msa1283120:CDS 45.0%
GTCACGAGATTTCTTCTTGG+AGG + chr8_3:24427309-24427328 Msa1283120:CDS 45.0%
CGGTAGAAAGTCCTATAGCT+TGG - chr8_3:24427491-24427510 None:intergenic 45.0%
!! GATTTCAGGTTAGTGCAGCT+TGG + chr8_3:24427587-24427606 Msa1283120:intron 45.0%
!! TTTCAGGTTAGTGCAGCTTG+GGG + chr8_3:24427589-24427608 Msa1283120:intron 45.0%
CCAAATAGCCTCCTATTGCT+GGG - chr8_3:24427633-24427652 None:intergenic 45.0%
! AATAGGAGGCTATTTGGCTC+AGG + chr8_3:24427636-24427655 Msa1283120:CDS 45.0%
GTAAAGCAGGGCAAGAAGTA+TGG - chr8_3:24428069-24428088 None:intergenic 45.0%
AATCGTCTGCATCTGGATTC+CGG + chr8_3:24428116-24428135 Msa1283120:CDS 45.0%
AAAACTTACCCCTGTGATGC+GGG - chr8_3:24429016-24429035 None:intergenic 45.0%
GAAAACTTACCCCTGTGATG+CGG - chr8_3:24429017-24429036 None:intergenic 45.0%
CCCTTCATAGCAATGTTGTC+AGG + chr8_3:24429142-24429161 Msa1283120:CDS 45.0%
GCCTGACAACATTGCTATGA+AGG - chr8_3:24429146-24429165 None:intergenic 45.0%
CTTAGGTGACGATTACAACG+GGG + chr8_3:24429334-24429353 Msa1283120:intron 45.0%
!! CCACTACTCGGTTTTGTACA+AGG - chr8_3:24429365-24429384 None:intergenic 45.0%
CCTTGTACAAAACCGAGTAG+TGG + chr8_3:24429362-24429381 Msa1283120:intron 45.0%
ACAGGAACAACACCAAAGAG+GGG + chr8_3:24429510-24429529 Msa1283120:intron 45.0%
ATGGATGCTTCTTTCCTACC+AGG + chr8_3:24429760-24429779 Msa1283120:intron 45.0%
AGTTGAGGATCAAACCTGGT+AGG - chr8_3:24429777-24429796 None:intergenic 45.0%
GTGCTTTACTTCAGGTCGAA+AGG + chr8_3:24429924-24429943 Msa1283120:intron 45.0%
!!! TTTAGTATTATTTTTTTTTT+TGG - chr8_3:24430066-24430085 None:intergenic 5.0%
GCTTGTTCGACCTTACAACC+AGG - chr8_3:24425775-24425794 None:intergenic 50.0%
GGCTTACCACTGACACATCA+TGG + chr8_3:24426607-24426626 Msa1283120:intron 50.0%
! TCGGCCTTAGTACGGGTTTT+TGG + chr8_3:24427277-24427296 Msa1283120:CDS 50.0%
GGAGGTTTAAATGGCGTGCT+TGG + chr8_3:24427327-24427346 Msa1283120:CDS 50.0%
!! CGAGAAGAGCACCAAGCTAT+AGG + chr8_3:24427477-24427496 Msa1283120:CDS 50.0%
ATTGTTGGCCCAGCAATAGG+AGG + chr8_3:24427622-24427641 Msa1283120:CDS 50.0%
CCCAGCAATAGGAGGCTATT+TGG + chr8_3:24427630-24427649 Msa1283120:CDS 50.0%
GCCAAATAGCCTCCTATTGC+TGG - chr8_3:24427634-24427653 None:intergenic 50.0%
CAGTAGCAATCGTCTGCATC+TGG + chr8_3:24428109-24428128 Msa1283120:CDS 50.0%
! TATGGGCTGTTAGTCCTCTG+AGG + chr8_3:24428769-24428788 Msa1283120:CDS 50.0%
!! CTGTTAGTCCTCTGAGGCTA+GGG + chr8_3:24428775-24428794 Msa1283120:CDS 50.0%
!! TGTTAGTCCTCTGAGGCTAG+GGG + chr8_3:24428776-24428795 Msa1283120:CDS 50.0%
AGCTTGTGGACCTATTGTCC+TGG + chr8_3:24428990-24429009 Msa1283120:CDS 50.0%
TTCCATTAGCTGCCCCTCTT+TGG - chr8_3:24429525-24429544 None:intergenic 50.0%
ACTTTCCCTTGCGTACGCAT+GGG + chr8_3:24430616-24430635 Msa1283120:three_prime_UTR 50.0%
ATTGACCCATGCGTACGCAA+GGG - chr8_3:24430624-24430643 None:intergenic 50.0%
AATTGACCCATGCGTACGCA+AGG - chr8_3:24430625-24430644 None:intergenic 50.0%
TGGCGTGCTTGGACCAGTTA+AGG + chr8_3:24427338-24427357 Msa1283120:CDS 55.0%
GTTAGTGCAGCTTGGGGCAT+AGG + chr8_3:24427595-24427614 Msa1283120:CDS 55.0%
!! GCTGTTAGTCCTCTGAGGCT+AGG + chr8_3:24428774-24428793 Msa1283120:CDS 55.0%
!! GTTAGTCCTCTGAGGCTAGG+GGG + chr8_3:24428777-24428796 Msa1283120:CDS 55.0%
TTCAAACCCCCTAGCCTCAG+AGG - chr8_3:24428786-24428805 None:intergenic 55.0%
CACCAAAGAGGGGCAGCTAA+TGG + chr8_3:24429520-24429539 Msa1283120:CDS 55.0%
AAAGCTGTTGGACCTGCTGC+TGG + chr8_3:24429571-24429590 Msa1283120:CDS 55.0%
CACATTGTACCACCAGCAGC+AGG - chr8_3:24429586-24429605 None:intergenic 55.0%
CACTTTCCCTTGCGTACGCA+TGG + chr8_3:24430615-24430634 Msa1283120:three_prime_UTR 55.0%
GTGATGCGGGCCAGGACAAT+AGG - chr8_3:24429003-24429022 None:intergenic 60.0%
ATTGTCCTGGCCCGCATCAC+AGG + chr8_3:24429003-24429022 Msa1283120:CDS 60.0%
TTGTCCTGGCCCGCATCACA+GGG + chr8_3:24429004-24429023 Msa1283120:CDS 60.0%
TGTCCTGGCCCGCATCACAG+GGG + chr8_3:24429005-24429024 Msa1283120:CDS 65.0%
TTACCCCTGTGATGCGGGCC+AGG - chr8_3:24429011-24429030 None:intergenic 65.0%
GCTGTTGGACCTGCTGCTGG+TGG + chr8_3:24429574-24429593 Msa1283120:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 24425400 24430752 24425400 ID=Msa1283120;Name=Msa1283120
chr8_3 mRNA 24425400 24430752 24425400 ID=Msa1283120-mRNA-1;Parent=Msa1283120;Name=Msa1283120-mRNA-1;_AED=0.22;_eAED=0.22;_QI=186|0.81|0.94|1|0.81|0.76|17|150|467
chr8_3 exon 24425400 24425542 24425400 ID=Msa1283120-mRNA-1:exon:8621;Parent=Msa1283120-mRNA-1
chr8_3 exon 24425669 24425862 24425669 ID=Msa1283120-mRNA-1:exon:8622;Parent=Msa1283120-mRNA-1
chr8_3 exon 24426148 24426188 24426148 ID=Msa1283120-mRNA-1:exon:8623;Parent=Msa1283120-mRNA-1
chr8_3 exon 24426917 24426977 24426917 ID=Msa1283120-mRNA-1:exon:8624;Parent=Msa1283120-mRNA-1
chr8_3 exon 24427064 24427166 24427064 ID=Msa1283120-mRNA-1:exon:8625;Parent=Msa1283120-mRNA-1
chr8_3 exon 24427257 24427359 24427257 ID=Msa1283120-mRNA-1:exon:8626;Parent=Msa1283120-mRNA-1
chr8_3 exon 24427456 24427509 24427456 ID=Msa1283120-mRNA-1:exon:8627;Parent=Msa1283120-mRNA-1
chr8_3 exon 24427595 24427657 24427595 ID=Msa1283120-mRNA-1:exon:8628;Parent=Msa1283120-mRNA-1
chr8_3 exon 24427903 24427952 24427903 ID=Msa1283120-mRNA-1:exon:8629;Parent=Msa1283120-mRNA-1
chr8_3 exon 24428062 24428137 24428062 ID=Msa1283120-mRNA-1:exon:8630;Parent=Msa1283120-mRNA-1
chr8_3 exon 24428462 24428659 24428462 ID=Msa1283120-mRNA-1:exon:8631;Parent=Msa1283120-mRNA-1
chr8_3 exon 24428759 24428846 24428759 ID=Msa1283120-mRNA-1:exon:8632;Parent=Msa1283120-mRNA-1
chr8_3 exon 24428941 24429026 24428941 ID=Msa1283120-mRNA-1:exon:8633;Parent=Msa1283120-mRNA-1
chr8_3 exon 24429112 24429219 24429112 ID=Msa1283120-mRNA-1:exon:8634;Parent=Msa1283120-mRNA-1
chr8_3 exon 24429514 24429602 24429514 ID=Msa1283120-mRNA-1:exon:8635;Parent=Msa1283120-mRNA-1
chr8_3 exon 24429738 24429757 24429738 ID=Msa1283120-mRNA-1:exon:8636;Parent=Msa1283120-mRNA-1
chr8_3 exon 24430490 24430752 24430490 ID=Msa1283120-mRNA-1:exon:8637;Parent=Msa1283120-mRNA-1
chr8_3 five_prime_UTR 24425400 24425542 24425400 ID=Msa1283120-mRNA-1:five_prime_utr;Parent=Msa1283120-mRNA-1
chr8_3 five_prime_UTR 24425669 24425711 24425669 ID=Msa1283120-mRNA-1:five_prime_utr;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24425712 24425862 24425712 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24426148 24426188 24426148 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24426917 24426977 24426917 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24427064 24427166 24427064 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24427257 24427359 24427257 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24427456 24427509 24427456 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24427595 24427657 24427595 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24427903 24427952 24427903 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24428062 24428137 24428062 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24428462 24428659 24428462 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24428759 24428846 24428759 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24428941 24429026 24428941 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24429112 24429219 24429112 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24429514 24429602 24429514 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24429738 24429757 24429738 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 CDS 24430490 24430602 24430490 ID=Msa1283120-mRNA-1:cds;Parent=Msa1283120-mRNA-1
chr8_3 three_prime_UTR 24430603 24430752 24430603 ID=Msa1283120-mRNA-1:three_prime_utr;Parent=Msa1283120-mRNA-1
Gene Sequence

>Msa1283120

ATGGAGGAGGAGCATATGAGAGAGCCATTGTTGGAGAAGAAGCAATACTATGAGGATTGTCCTGGTTGTAAGGTCGAACAAGCAAATGAGCTTAATGAAGGAGTATCCATTATAAAGCTTTTGATTATATGGATGGTGGTTTTATCTGCTACTCTTCCTACATCATCTCTCTTTCCCTTCCTTTATTTCATGGTAAGGGACTTCAATATTGCAGAAGAAGAAGCTGATATTAGTTACTATGCTGGTTATATTGGATCTTCATACATGCTTGGAAGATGTTTCACAGCTGTATTATGGGGAATGGTTTCAGATCGCTATGGTCGAAAACCTGTATTAATAATGGGGATTATCGCAGTTGTCATTTTCAACACATTATTCGGCCTTAGTACGGGTTTTTGGATGGCTATTGTCACGAGATTTCTTCTTGGAGGTTTAAATGGCGTGCTTGGACCAGTTAAGGCCTATGCTACTGAACTTTTTCGAGAAGAGCACCAAGCTATAGGACTTTCTACCGTTAGTGCAGCTTGGGGCATAGGTTTAATTGTTGGCCCAGCAATAGGAGGCTATTTGGCTCAGCCTGTAGACAAATACCCACAAATATTTCCAAAAGACTCCTTTTGGGATAAGTTCCCATACTTCTTGCCCTGCTTTACAATATCAGCACTTGCACTTTCAGTAGCAATCGTCTGCATCTGGATTCCGCTATTAAACTATCCACAGGAAACACTTCACAATCACAATGGTAGCGAAGAGTTCAAAGGCGATGCCGAAGCTTTAGAAAACGGAAGCAGCAAAGAAAAGACAGTCCAAAAGAATGAAAATCTCTTTTTGAATTGGCCTTTAATGTCATCTATCATTGCTTATTGCGTCGTCTCTCTTCATGATATTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCTGAGGCTAGGGGGTTTGAAGTTTACAACTGATGATGTTGGTGATGTTCTTTCAATTTCAGGAGTTGCACTTTGCATCTACCAACTTTTCATATACCCATATGTGGAAAAAGCTTGTGGACCTATTGTCCTGGCCCGCATCACAGGGATTATTTCCATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGCATAACCTTATACATTGTGATTAGTATTGCTTCCATCCTTAAGAATGTTATTGCTGAACAACACCAAAGAGGGGCAGCTAATGGAATTTCTATGACAGCAATGTCTCTATTCAAAGCTGTTGGACCTGCTGCTGGTGGTACAATATTAACTTGGTCACAAAAGCGAACTCAAATGGTGTTTTTCTTCCTTAATTTAGTTGAAGGACTTGGAATACTTTTGATGTGTAAACCATTTCTTGGTGAAAAGAAGAAAACAAACTCACACGAGTTACATTGA

Protein sequence

>Msa1283120

MEEEHMREPLLEKKQYYEDCPGCKVEQANELNEGVSIIKLLIIWMVVLSATLPTSSLFPFLYFMVRDFNIAEEEADISYYAGYIGSSYMLGRCFTAVLWGMVSDRYGRKPVLIMGIIAVVIFNTLFGLSTGFWMAIVTRFLLGGLNGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIVGPAIGGYLAQPVDKYPQIFPKDSFWDKFPYFLPCFTISALALSVAIVCIWIPLLNYPQETLHNHNGSEEFKGDAEALENGSSKEKTVQKNENLFLNWPLMSSIIAYCVVSLHDIAYQEVFSLWAVSPLRLGGLKFTTDDVGDVLSISGVALCIYQLFIYPYVEKACGPIVLARITGIISIPLLQSYPFIAMLSGITLYIVISIASILKNVIAEQHQRGAANGISMTAMSLFKAVGPAAGGTILTWSQKRTQMVFFFLNLVEGLGILLMCKPFLGEKKKTNSHELH*