Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067733.t1 | XP_003606112.1 | 88.7 | 496 | 49 | 1 | 1 | 496 | 1 | 489 | 9.30E-237 | 829.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067733.t1 | Q93XM6 | 57.9 | 503 | 183 | 7 | 1 | 496 | 1 | 481 | 1.9e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067733.t1 | G7JIE0 | 88.7 | 496 | 49 | 1 | 1 | 496 | 1 | 489 | 6.7e-237 | 829.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067733.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene067733 | -0.833431 | 5.36E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene067733 | -0.809553 | 1.79E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene067733 | -0.846828 | 1.70E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene067733 | -0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene067733 | -0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene067733 | -0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene049549 | MS.gene067733 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene067733 | -0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene067733 | 0.803379 | 3.59E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene067733 | -0.833573 | 4.94E-56 | -1.69E-46 |
| MS.gene049634 | MS.gene067733 | 0.808835 | 2.55E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene067733 | -0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene067733 | -0.814909 | 1.21E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene067733 | -0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene067733 | -0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene067733 | -0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene067733 | 0.823306 | 1.49E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene067733 | -0.811647 | 6.31E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene067733 | -0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene067733 | -0.83393 | 4.02E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene067733 | -0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene067733 | -0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene067733 | -0.843736 | 1.17E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene067733 | -0.802046 | 6.76E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene067733 | -0.849003 | 4.27E-60 | -1.69E-46 |
| MS.gene050647 | MS.gene067733 | 0.810063 | 1.39E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene067733 | -0.804978 | 1.67E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene067733 | -0.822355 | 2.48E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene067733 | -0.832196 | 1.08E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene067733 | -0.824642 | 7.23E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene067733 | -0.830907 | 2.25E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene067733 | -0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene067733 | -0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene067733 | -0.834519 | 2.86E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene067733 | -0.82716 | 1.82E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene067733 | -0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene067733 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene067733 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene067733 | -0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene051632 | MS.gene067733 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene067733 | 0.827252 | 1.73E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene067733 | -0.806116 | 9.62E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene067733 | -0.804088 | 2.56E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene067733 | -0.814274 | 1.67E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene067733 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene067733 | 0.812483 | 4.14E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene067733 | -0.814503 | 1.49E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene067733 | -0.821362 | 4.20E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene067733 | -0.818897 | 1.54E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene067733 | 0.822999 | 1.75E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene067733 | -0.841482 | 4.63E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene067733 | -0.816046 | 6.77E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene067733 | -0.810204 | 1.30E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene067733 | -0.826944 | 2.05E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene067733 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene067733 | -0.828323 | 9.58E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene067733 | -0.817795 | 2.74E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene067733 | -0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene067733 | -0.827041 | 1.95E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene067733 | -0.806086 | 9.76E-50 | -1.69E-46 |
| MS.gene053488 | MS.gene067733 | 0.804459 | 2.14E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene067733 | -0.828935 | 6.82E-55 | -1.69E-46 |
| MS.gene053579 | MS.gene067733 | -0.811217 | 7.82E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene067733 | -0.806339 | 8.63E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene067733 | -0.81295 | 3.28E-51 | -1.69E-46 |
| MS.gene054146 | MS.gene067733 | 0.810618 | 1.05E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene067733 | 0.801441 | 8.99E-49 | -1.69E-46 |
| MS.gene054290 | MS.gene067733 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene054408 | MS.gene067733 | -0.820843 | 5.53E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene067733 | -0.840195 | 1.01E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene067733 | -0.813547 | 2.42E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene067733 | -0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene067733 | 0.82485 | 6.46E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene067733 | -0.823591 | 1.28E-53 | -1.69E-46 |
| MS.gene054884 | MS.gene067733 | 0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene067733 | -0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene067733 | 0.815422 | 9.32E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene067733 | 0.824578 | 7.48E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene067733 | -0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene067733 | -0.820501 | 6.63E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene067733 | -0.852337 | 4.93E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene067733 | -0.838733 | 2.41E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene067733 | -0.832092 | 1.15E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene067733 | -0.841124 | 5.75E-58 | -1.69E-46 |
| MS.gene055751 | MS.gene067733 | -0.831338 | 1.77E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene067733 | -0.850052 | 2.18E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene067733 | -0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene067733 | -0.825228 | 5.26E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene067733 | -0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene067733 | -0.852743 | 3.78E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene067733 | -0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene067733 | -0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene067733 | 0.827742 | 1.32E-54 | -1.69E-46 |
| MS.gene056591 | MS.gene067733 | 0.82619 | 3.11E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene067733 | -0.831264 | 1.84E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene067733 | 0.836071 | 1.16E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene067733 | -0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene067733 | -0.812539 | 4.03E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene067733 | -0.809598 | 1.75E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene067733 | 0.824968 | 6.06E-54 | -1.69E-46 |
| MS.gene057768 | MS.gene067733 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene067733 | -0.826154 | 3.17E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene067733 | -0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene058109 | MS.gene067733 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene058111 | MS.gene067733 | 0.802024 | 6.82E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene067733 | -0.817757 | 2.79E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene067733 | 0.822821 | 1.93E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene067733 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene067733 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene067733 | 0.820054 | 8.40E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene067733 | -0.831175 | 1.94E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene067733 | -0.84847 | 6.01E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene067733 | -0.843892 | 1.06E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene067733 | -0.837852 | 4.07E-57 | -1.69E-46 |
| MS.gene058603 | MS.gene067733 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene067733 | -0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene067733 | -0.834439 | 3.00E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene067733 | -0.822413 | 2.40E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene067733 | -0.835543 | 1.58E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene067733 | -0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene067733 | -0.810319 | 1.22E-50 | -1.69E-46 |
| MS.gene059526 | MS.gene067733 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene067733 | -0.821798 | 3.33E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene067733 | -0.820916 | 5.33E-53 | -1.69E-46 |
| MS.gene059756 | MS.gene067733 | -0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene067733 | -0.815578 | 8.60E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene067733 | -0.844174 | 8.90E-59 | -1.69E-46 |
| MS.gene059953 | MS.gene067733 | 0.82866 | 7.95E-55 | -1.69E-46 |
| MS.gene059955 | MS.gene067733 | 0.823749 | 1.17E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene067733 | -0.820546 | 6.48E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene067733 | -0.800563 | 1.36E-48 | -1.69E-46 |
| MS.gene060593 | MS.gene067733 | 0.813258 | 2.80E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene067733 | 0.807266 | 5.50E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene067733 | -0.831447 | 1.66E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene067733 | -0.827089 | 1.90E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene067733 | -0.838037 | 3.65E-57 | -1.69E-46 |
| MS.gene06097 | MS.gene067733 | -0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene067733 | -0.859791 | 3.24E-63 | -1.69E-46 |
| MS.gene061150 | MS.gene067733 | -0.811511 | 6.75E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067733.t1 | MTR_4g053250 | 96.573 | 496 | 10 | 1 | 1 | 496 | 1 | 489 | 0.0 | 989 |
| MS.gene067733.t1 | MTR_2g086420 | 65.362 | 511 | 148 | 8 | 1 | 496 | 1 | 497 | 0.0 | 622 |
| MS.gene067733.t1 | MTR_2g086420 | 65.166 | 511 | 148 | 8 | 1 | 496 | 1 | 496 | 0.0 | 620 |
| MS.gene067733.t1 | MTR_7g092750 | 53.774 | 318 | 124 | 5 | 174 | 468 | 45 | 362 | 4.85e-112 | 336 |
| MS.gene067733.t1 | MTR_7g089800 | 48.634 | 366 | 158 | 5 | 119 | 468 | 72 | 423 | 5.01e-112 | 338 |
| MS.gene067733.t1 | MTR_7g089800 | 48.634 | 366 | 158 | 5 | 119 | 468 | 101 | 452 | 9.40e-112 | 338 |
| MS.gene067733.t1 | MTR_7g092750 | 53.774 | 318 | 124 | 5 | 174 | 468 | 146 | 463 | 1.75e-111 | 338 |
| MS.gene067733.t1 | MTR_8g040120 | 57.732 | 291 | 104 | 3 | 194 | 468 | 179 | 466 | 2.43e-111 | 338 |
| MS.gene067733.t1 | MTR_3g087940 | 45.892 | 353 | 160 | 5 | 126 | 468 | 30 | 361 | 4.44e-104 | 315 |
| MS.gene067733.t1 | MTR_5g054900 | 52.778 | 288 | 123 | 2 | 194 | 468 | 66 | 353 | 8.06e-103 | 312 |
| MS.gene067733.t1 | MTR_5g054900 | 50.000 | 312 | 139 | 3 | 170 | 468 | 127 | 434 | 7.97e-102 | 312 |
| MS.gene067733.t1 | MTR_5g054900 | 52.083 | 288 | 121 | 3 | 194 | 468 | 66 | 349 | 4.53e-99 | 302 |
| MS.gene067733.t1 | MTR_5g054900 | 49.359 | 312 | 137 | 4 | 170 | 468 | 157 | 460 | 6.70e-98 | 303 |
| MS.gene067733.t1 | MTR_7g092750 | 50.000 | 318 | 110 | 6 | 174 | 468 | 146 | 437 | 7.08e-98 | 302 |
| MS.gene067733.t1 | MTR_1g111310 | 49.333 | 300 | 138 | 2 | 183 | 468 | 408 | 707 | 1.02e-93 | 300 |
| MS.gene067733.t1 | MTR_1g111310 | 49.301 | 286 | 139 | 2 | 183 | 462 | 41 | 326 | 2.30e-83 | 272 |
| MS.gene067733.t1 | MTR_8g091650 | 49.286 | 280 | 131 | 3 | 199 | 468 | 5 | 283 | 4.32e-85 | 264 |
| MS.gene067733.t1 | MTR_0126s0080 | 40.909 | 418 | 172 | 9 | 36 | 421 | 85 | 459 | 6.17e-85 | 270 |
| MS.gene067733.t1 | MTR_8g091650 | 49.117 | 283 | 133 | 3 | 196 | 468 | 75 | 356 | 7.80e-85 | 266 |
| MS.gene067733.t1 | MTR_5g060950 | 46.624 | 311 | 153 | 5 | 167 | 465 | 37 | 346 | 1.21e-84 | 265 |
| MS.gene067733.t1 | MTR_8g091650 | 49.117 | 283 | 133 | 3 | 196 | 468 | 111 | 392 | 4.72e-84 | 265 |
| MS.gene067733.t1 | MTR_3g073560 | 46.349 | 315 | 155 | 5 | 167 | 470 | 38 | 349 | 5.99e-82 | 266 |
| MS.gene067733.t1 | MTR_3g044820 | 50.847 | 177 | 72 | 3 | 183 | 344 | 32 | 208 | 5.10e-58 | 191 |
| MS.gene067733.t1 | MTR_1g090370 | 33.537 | 164 | 92 | 4 | 288 | 450 | 70 | 217 | 4.09e-18 | 84.0 |
| MS.gene067733.t1 | MTR_1g111320 | 36.842 | 171 | 86 | 4 | 93 | 249 | 37 | 199 | 6.64e-18 | 83.2 |
| MS.gene067733.t1 | MTR_8g094690 | 25.316 | 237 | 138 | 5 | 257 | 455 | 12 | 247 | 9.31e-16 | 77.8 |
| MS.gene067733.t1 | MTR_7g068860 | 22.831 | 219 | 149 | 4 | 256 | 458 | 5 | 219 | 7.76e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067733.t1 | AT1G08320 | 55.467 | 503 | 195 | 8 | 1 | 496 | 1 | 481 | 0.0 | 533 |
| MS.gene067733.t1 | AT1G08320 | 55.467 | 503 | 195 | 8 | 1 | 496 | 1 | 481 | 0.0 | 533 |
| MS.gene067733.t1 | AT1G08320 | 55.467 | 503 | 195 | 8 | 1 | 496 | 1 | 481 | 0.0 | 533 |
| MS.gene067733.t1 | AT1G08320 | 69.255 | 322 | 95 | 3 | 178 | 496 | 37 | 357 | 4.16e-163 | 466 |
| MS.gene067733.t1 | AT1G08320 | 69.255 | 322 | 95 | 3 | 178 | 496 | 37 | 357 | 4.16e-163 | 466 |
| MS.gene067733.t1 | AT5G06839 | 47.258 | 383 | 162 | 5 | 127 | 469 | 34 | 416 | 1.19e-108 | 329 |
| MS.gene067733.t1 | AT3G12250 | 55.137 | 292 | 119 | 2 | 189 | 468 | 12 | 303 | 2.53e-108 | 324 |
| MS.gene067733.t1 | AT5G06950 | 55.932 | 295 | 112 | 4 | 189 | 468 | 39 | 330 | 2.74e-108 | 325 |
| MS.gene067733.t1 | AT5G06950 | 55.932 | 295 | 112 | 4 | 189 | 468 | 39 | 330 | 2.74e-108 | 325 |
| MS.gene067733.t1 | AT5G06950 | 55.932 | 295 | 112 | 4 | 189 | 468 | 39 | 330 | 2.74e-108 | 325 |
| MS.gene067733.t1 | AT5G06950 | 55.932 | 295 | 112 | 4 | 189 | 468 | 39 | 330 | 2.74e-108 | 325 |
| MS.gene067733.t1 | AT5G06950 | 55.932 | 295 | 112 | 4 | 189 | 468 | 39 | 330 | 2.74e-108 | 325 |
| MS.gene067733.t1 | AT3G12250 | 53.642 | 302 | 128 | 2 | 179 | 468 | 29 | 330 | 3.60e-108 | 325 |
| MS.gene067733.t1 | AT3G12250 | 53.642 | 302 | 128 | 2 | 179 | 468 | 29 | 330 | 3.60e-108 | 325 |
| MS.gene067733.t1 | AT3G12250 | 53.642 | 302 | 128 | 2 | 179 | 468 | 29 | 330 | 3.60e-108 | 325 |
| MS.gene067733.t1 | AT3G12250 | 53.642 | 302 | 128 | 2 | 179 | 468 | 29 | 330 | 3.60e-108 | 325 |
| MS.gene067733.t1 | AT5G06839 | 52.308 | 325 | 127 | 3 | 173 | 469 | 135 | 459 | 3.92e-108 | 329 |
| MS.gene067733.t1 | AT3G12250 | 53.074 | 309 | 133 | 2 | 172 | 468 | 16 | 324 | 4.90e-108 | 324 |
| MS.gene067733.t1 | AT5G06839 | 47.135 | 384 | 162 | 6 | 127 | 469 | 34 | 417 | 2.87e-107 | 326 |
| MS.gene067733.t1 | AT3G12250 | 53.770 | 305 | 123 | 3 | 179 | 468 | 54 | 355 | 7.15e-107 | 322 |
| MS.gene067733.t1 | AT5G06960 | 53.472 | 288 | 122 | 2 | 193 | 468 | 43 | 330 | 5.96e-100 | 304 |
| MS.gene067733.t1 | AT5G06960 | 53.472 | 288 | 122 | 2 | 193 | 468 | 43 | 330 | 5.96e-100 | 304 |
| MS.gene067733.t1 | AT5G06960 | 53.472 | 288 | 122 | 2 | 193 | 468 | 23 | 310 | 8.18e-100 | 303 |
| MS.gene067733.t1 | AT1G22070 | 50.462 | 325 | 143 | 5 | 158 | 469 | 64 | 383 | 4.17e-97 | 298 |
| MS.gene067733.t1 | AT1G68640 | 53.898 | 295 | 116 | 4 | 191 | 468 | 161 | 452 | 4.48e-95 | 295 |
| MS.gene067733.t1 | AT5G10030 | 51.237 | 283 | 128 | 2 | 196 | 468 | 80 | 362 | 1.42e-93 | 289 |
| MS.gene067733.t1 | AT5G10030 | 51.237 | 283 | 128 | 2 | 196 | 468 | 80 | 362 | 1.42e-93 | 289 |
| MS.gene067733.t1 | AT5G10030 | 51.237 | 283 | 128 | 2 | 196 | 468 | 80 | 362 | 1.42e-93 | 289 |
| MS.gene067733.t1 | AT5G10030 | 51.237 | 283 | 128 | 2 | 196 | 468 | 80 | 362 | 1.42e-93 | 289 |
| MS.gene067733.t1 | AT5G10030 | 51.237 | 283 | 128 | 2 | 196 | 468 | 80 | 362 | 1.42e-93 | 289 |
| MS.gene067733.t1 | AT1G77920 | 49.342 | 304 | 146 | 4 | 168 | 468 | 68 | 366 | 3.96e-92 | 285 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 14 | 296 | 1.44e-91 | 281 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT5G65210 | 50.530 | 283 | 130 | 2 | 196 | 468 | 84 | 366 | 6.03e-91 | 282 |
| MS.gene067733.t1 | AT3G14880 | 27.586 | 203 | 126 | 5 | 267 | 450 | 17 | 217 | 2.51e-15 | 75.9 |
| MS.gene067733.t1 | AT3G14880 | 26.667 | 210 | 126 | 6 | 267 | 450 | 17 | 224 | 7.15e-14 | 72.0 |
| MS.gene067733.t1 | AT1G58330 | 26.966 | 178 | 117 | 4 | 294 | 458 | 46 | 223 | 2.24e-12 | 67.0 |
Find 107 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGATGTTTCATTGTTAT+TGG | 0.193670 | 4.2:-49175450 | MS.gene067733:CDS |
| TTCGAGCCCTTAGCTCTCTT+TGG | 0.224036 | 4.2:-49175410 | MS.gene067733:CDS |
| AGCCAAAGAATTGGAGAAAT+TGG | 0.227335 | 4.2:-49183852 | MS.gene067733:CDS |
| AACCAATTTCTCCAATTCTT+TGG | 0.257495 | 4.2:+49183850 | None:intergenic |
| TTCACCTTATTAAAGGCATT+TGG | 0.259017 | 4.2:-49177960 | MS.gene067733:CDS |
| CACTTGAAATGTTTCCTTCA+TGG | 0.278419 | 4.2:-49183130 | MS.gene067733:CDS |
| TATTTAATAGGGACTATTCT+TGG | 0.280376 | 4.2:-49181142 | MS.gene067733:intron |
| GGAGCTTAGGGCGGGGCTGC+AGG | 0.299476 | 4.2:-49178085 | MS.gene067733:CDS |
| CTATTCTTGGGTTGTGGTGG+TGG | 0.320708 | 4.2:-49181129 | MS.gene067733:CDS |
| TTGAAGGTCTTGTTCAAGAT+TGG | 0.333324 | 4.2:+49181275 | None:intergenic |
| GAAAAGCCGTCTAAGGAAAA+AGG | 0.335701 | 4.2:-49181566 | MS.gene067733:intron |
| CATCTATTTGTTGCTGCGCT+AGG | 0.338242 | 4.2:+49177697 | None:intergenic |
| TCAAGTCAACATGTCCCTTA+TGG | 0.339592 | 4.2:-49183810 | MS.gene067733:CDS |
| GTCCCTTATGGAGTTCTTCA+TGG | 0.344846 | 4.2:-49183798 | MS.gene067733:CDS |
| GGCGGGGCTGCAGGCATCGT+TGG | 0.347658 | 4.2:-49178076 | MS.gene067733:CDS |
| TTGAAGAATGAATACATTAA+GGG | 0.348931 | 4.2:+49183756 | None:intergenic |
| CTTGAAATGATGAAGTATTC+AGG | 0.362662 | 4.2:+49177664 | None:intergenic |
| TCACCTTATTAAAGGCATTT+GGG | 0.365420 | 4.2:-49177959 | MS.gene067733:CDS |
| TCGAGCCCTTAGCTCTCTTT+GGG | 0.367721 | 4.2:-49175409 | MS.gene067733:CDS |
| GGAGGAGAAAGTACTGATTC+AGG | 0.370655 | 4.2:-49182745 | MS.gene067733:CDS |
| GGTGTTTGTTGAAATCTAAT+TGG | 0.377286 | 4.2:+49183107 | None:intergenic |
| AGCTAGAGTCAAGTAGATTA+AGG | 0.378396 | 4.2:-49181302 | MS.gene067733:CDS |
| ATTGTTATTGGAGAGTATTA+TGG | 0.381252 | 4.2:-49175438 | MS.gene067733:CDS |
| ATCTATTTGTTGCTGCGCTA+GGG | 0.382547 | 4.2:+49177698 | None:intergenic |
| CCTGTGAGCGTGCTCTTTGA+AGG | 0.383069 | 4.2:+49181259 | None:intergenic |
| GAAGAGGCAATTGTTCTTCA+AGG | 0.388401 | 4.2:-49183566 | MS.gene067733:CDS |
| GCGGGGCTGCAGGCATCGTT+GGG | 0.388454 | 4.2:-49178075 | MS.gene067733:CDS |
| CTAGCGCAGCAACAAATAGA+TGG | 0.389368 | 4.2:-49177696 | MS.gene067733:CDS |
| CTGCTGAGAGACCCTTCATT+TGG | 0.391421 | 4.2:-49177930 | MS.gene067733:CDS |
| AACGACACATGGCGGAGCTT+AGG | 0.392881 | 4.2:-49178098 | MS.gene067733:CDS |
| AAGCCCAAATGCCTTTAATA+AGG | 0.402887 | 4.2:+49177956 | None:intergenic |
| ATTTAATAGGGACTATTCTT+GGG | 0.408206 | 4.2:-49181141 | MS.gene067733:intron |
| TGTTGTTGTCTTAGGAATCA+AGG | 0.409085 | 4.2:-49183614 | MS.gene067733:intron |
| TAGGGACTATTCTTGGGTTG+TGG | 0.414870 | 4.2:-49181135 | MS.gene067733:CDS |
| GAAATTGGTTTGTCTGAGTC+TGG | 0.415790 | 4.2:-49183837 | MS.gene067733:CDS |
| CTGCAAAGAAAAGCCGTCTA+AGG | 0.419091 | 4.2:-49181573 | MS.gene067733:CDS |
| TGATCAGACACTGAGACGTT+TGG | 0.430811 | 4.2:-49181611 | MS.gene067733:intron |
| ACGACACATGGCGGAGCTTA+GGG | 0.435245 | 4.2:-49178097 | MS.gene067733:CDS |
| TGCATGGCTAGCCAAAGAAT+TGG | 0.437865 | 4.2:-49183861 | MS.gene067733:CDS |
| GCAGCAGCTTCAACAGCAAC+AGG | 0.443356 | 4.2:-49182638 | MS.gene067733:CDS |
| ATATAGGGAGGTTCAAAATC+AGG | 0.447096 | 4.2:-49182766 | MS.gene067733:intron |
| GCCGGAGGGCCTGTCGTTGA+CGG | 0.453170 | 4.2:-49177582 | MS.gene067733:CDS |
| GCAACAAATAGATGGGATAA+TGG | 0.454978 | 4.2:-49177688 | MS.gene067733:CDS |
| ATTCCATGAAGAACTCCATA+AGG | 0.455812 | 4.2:+49183795 | None:intergenic |
| GTAGATGTTGACACAACAAT+TGG | 0.464222 | 4.2:-49177724 | MS.gene067733:intron |
| TTTGCAATTCTGTGGTTGCT+TGG | 0.468162 | 4.2:+49174604 | None:intergenic |
| AGATGGTTGCCGCCATGGCC+AGG | 0.469755 | 4.2:-49177551 | MS.gene067733:CDS |
| TAAGGGACATGTTGACTTGA+AGG | 0.470369 | 4.2:+49183813 | None:intergenic |
| GCAGAAGAAGCTCTCTCTAA+AGG | 0.470527 | 4.2:-49177642 | MS.gene067733:CDS |
| AACGACAGGCCCTCCGGCGA+TGG | 0.470647 | 4.2:+49177587 | None:intergenic |
| AGCCAAATCACCTCATGAAA+AGG | 0.477424 | 4.2:-49182560 | MS.gene067733:intron |
| ACTGATGATCGCTTAAGAAC+AGG | 0.478092 | 4.2:-49182607 | MS.gene067733:CDS |
| AATTGTAGGCTGATAATTTG+AGG | 0.478296 | 4.2:-49175521 | MS.gene067733:intron |
| TGAAATCTAATTGGCCATGA+AGG | 0.480352 | 4.2:+49183116 | None:intergenic |
| GGACTATTCTTGGGTTGTGG+TGG | 0.490197 | 4.2:-49181132 | MS.gene067733:CDS |
| GCCGTCAACGACAGGCCCTC+CGG | 0.490375 | 4.2:+49177581 | None:intergenic |
| AACATTTCAAGTGTAGCTGC+TGG | 0.491575 | 4.2:+49183140 | None:intergenic |
| GCAACAGATGGTTGCCGCCA+TGG | 0.491703 | 4.2:-49177556 | MS.gene067733:CDS |
| CAAATGAAGGGTCTCTCAGC+AGG | 0.492161 | 4.2:+49177931 | None:intergenic |
| TAACAGCCACCTCCTTCAAT+CGG | 0.494670 | 4.2:+49177995 | None:intergenic |
| TGTTGCATGCCGTCAACGAC+AGG | 0.495188 | 4.2:+49177573 | None:intergenic |
| GTTGTTGTCTTAGGAATCAA+GGG | 0.496590 | 4.2:-49183613 | MS.gene067733:intron |
| GAAACCACCTATCCAAATGA+AGG | 0.507472 | 4.2:+49177918 | None:intergenic |
| GTGAGAGAAGCTACAACTCT+TGG | 0.508120 | 4.2:+49183086 | None:intergenic |
| CACATGGCGGAGCTTAGGGC+GGG | 0.511735 | 4.2:-49178093 | MS.gene067733:CDS |
| AGACCCTTCATTTGGATAGG+TGG | 0.525909 | 4.2:-49177922 | MS.gene067733:CDS |
| CCAACTATGTCGAATATTGA+CGG | 0.527349 | 4.2:-49175484 | MS.gene067733:CDS |
| ACATGGCGGAGCTTAGGGCG+GGG | 0.538791 | 4.2:-49178092 | MS.gene067733:CDS |
| AATATTGACGGTTCGTCAAG+CGG | 0.542904 | 4.2:-49175472 | MS.gene067733:CDS |
| ATTAAGATAAGAAATGATGA+AGG | 0.543974 | 4.2:-49183542 | MS.gene067733:CDS |
| ACATAAGGAATGGTCAAAGA+TGG | 0.545520 | 4.2:+49183059 | None:intergenic |
| AGCAACCACAGAATTGCAAA+TGG | 0.553522 | 4.2:-49174601 | MS.gene067733:CDS |
| TTGAAGCCCAAAGAGAGCTA+AGG | 0.553832 | 4.2:+49175403 | None:intergenic |
| AGAAAAGACACTTGATCCAA+AGG | 0.554531 | 4.2:-49181828 | MS.gene067733:intron |
| GAGAGACCCTTCATTTGGAT+AGG | 0.567532 | 4.2:-49177925 | MS.gene067733:CDS |
| GAGAATGTTTACATAAGGAA+TGG | 0.568455 | 4.2:+49183049 | None:intergenic |
| CCTTCAAAGAGCACGCTCAC+AGG | 0.569093 | 4.2:-49181259 | MS.gene067733:intron |
| TCTATTTGTTGCTGCGCTAG+GGG | 0.569490 | 4.2:+49177699 | None:intergenic |
| ATTGTTGACACCATCGCCGG+AGG | 0.572201 | 4.2:-49177597 | MS.gene067733:CDS |
| CCGTCAATATTCGACATAGT+TGG | 0.573495 | 4.2:+49175484 | None:intergenic |
| TGAAGCCCAAAGAGAGCTAA+GGG | 0.583591 | 4.2:+49175404 | None:intergenic |
| TAGCGCAGCAACAAATAGAT+GGG | 0.590596 | 4.2:-49177695 | MS.gene067733:CDS |
| TTGTTGACACCATCGCCGGA+GGG | 0.591648 | 4.2:-49177596 | MS.gene067733:CDS |
| GGTATTAGGTCTTACTCTCG+TGG | 0.591995 | 4.2:+49175378 | None:intergenic |
| CTTGAGAAATGACTATGAGA+AGG | 0.592625 | 4.2:+49174573 | None:intergenic |
| ACACATGGCGGAGCTTAGGG+CGG | 0.596440 | 4.2:-49178094 | MS.gene067733:CDS |
| GCTATTGTTGACACCATCGC+CGG | 0.599785 | 4.2:-49177600 | MS.gene067733:CDS |
| ATACATTAAGGGTGATGTTG+AGG | 0.600765 | 4.2:+49183767 | None:intergenic |
| TTCCATGAAGAACTCCATAA+GGG | 0.601892 | 4.2:+49183796 | None:intergenic |
| AAGATTGGAAATCCTGGCCA+TGG | 0.602327 | 4.2:+49177539 | None:intergenic |
| GAATTGAGAGTGATCGTGGA+CGG | 0.616655 | 4.2:-49178045 | MS.gene067733:CDS |
| TAATGAATTGAGAGTGATCG+TGG | 0.617953 | 4.2:-49178049 | MS.gene067733:CDS |
| AAAGAGAGCTAAGGGCTCGA+AGG | 0.622342 | 4.2:+49175412 | None:intergenic |
| CGTTGACGGCATGCAACAGA+TGG | 0.625586 | 4.2:-49177568 | MS.gene067733:CDS |
| TTGAACCATTTGCAATTCTG+TGG | 0.626591 | 4.2:+49174596 | None:intergenic |
| AGAAGAAGATCAACGACACA+TGG | 0.630083 | 4.2:-49178109 | MS.gene067733:CDS |
| ACATACCGTGATGAGTTCTG+AGG | 0.636962 | 4.2:+49177891 | None:intergenic |
| AAACCACCTATCCAAATGAA+GGG | 0.649407 | 4.2:+49177919 | None:intergenic |
| CATACCGTGATGAGTTCTGA+GGG | 0.662424 | 4.2:+49177892 | None:intergenic |
| TGGTGTCAACAATAGCATTG+TGG | 0.671299 | 4.2:+49177607 | None:intergenic |
| AGGAGCTGCAATGTTTGACA+TGG | 0.673799 | 4.2:-49178148 | MS.gene067733:CDS |
| TAGGGAGGTTCAAAATCAGG+AGG | 0.677105 | 4.2:-49182763 | MS.gene067733:CDS |
| GGTGGTGGCAATATAAGCCC+TGG | 0.687235 | 4.2:-49181114 | MS.gene067733:intron |
| TTGACATGGAGTATGCAAGA+TGG | 0.703314 | 4.2:-49178134 | MS.gene067733:CDS |
| CAGACCCTCAGAACTCATCA+CGG | 0.712668 | 4.2:-49177896 | MS.gene067733:intron |
| AGAAGATCAACGACACATGG+CGG | 0.715959 | 4.2:-49178106 | MS.gene067733:CDS |
| ATTGGAAATCCTGGCCATGG+CGG | 0.718776 | 4.2:+49177542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 49174566 | 49183880 | 49174566 | ID=MS.gene067733 |
| chr4.2 | mRNA | 49174566 | 49183880 | 49174566 | ID=MS.gene067733.t1;Parent=MS.gene067733 |
| chr4.2 | exon | 49183771 | 49183880 | 49183771 | ID=MS.gene067733.t1.exon1;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49183771 | 49183880 | 49183771 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49183534 | 49183622 | 49183534 | ID=MS.gene067733.t1.exon2;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49183534 | 49183622 | 49183534 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49183061 | 49183182 | 49183061 | ID=MS.gene067733.t1.exon3;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49183061 | 49183182 | 49183061 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49182561 | 49182782 | 49182561 | ID=MS.gene067733.t1.exon4;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49182561 | 49182782 | 49182561 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49181829 | 49181873 | 49181829 | ID=MS.gene067733.t1.exon5;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49181829 | 49181873 | 49181829 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49181567 | 49181626 | 49181567 | ID=MS.gene067733.t1.exon6;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49181567 | 49181626 | 49181567 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49181260 | 49181337 | 49181260 | ID=MS.gene067733.t1.exon7;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49181260 | 49181337 | 49181260 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49181115 | 49181154 | 49181115 | ID=MS.gene067733.t1.exon8;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49181115 | 49181154 | 49181115 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49177897 | 49178168 | 49177897 | ID=MS.gene067733.t1.exon9;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49177897 | 49178168 | 49177897 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49177521 | 49177742 | 49177521 | ID=MS.gene067733.t1.exon10;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49177521 | 49177742 | 49177521 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49175393 | 49175535 | 49175393 | ID=MS.gene067733.t1.exon11;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49175393 | 49175535 | 49175393 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| chr4.2 | exon | 49174566 | 49174653 | 49174566 | ID=MS.gene067733.t1.exon12;Parent=MS.gene067733.t1 |
| chr4.2 | CDS | 49174566 | 49174653 | 49174566 | ID=cds.MS.gene067733.t1;Parent=MS.gene067733.t1 |
| Gene Sequence |
| Protein sequence |
