Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21625.t1 | XP_003611071.1 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 6.30E-203 | 716.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21625.t1 | Q9MAA2 | 54.5 | 264 | 116 | 3 | 82 | 343 | 9 | 270 | 1.7e-76 | 287.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21625.t1 | G7KC13 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 4.5e-203 | 716.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21625 | 0.848938 | 4.45E-60 | -1.69E-46 |
| MS.gene049170 | MS.gene21625 | 0.83992 | 1.19E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene21625 | 0.819637 | 1.05E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene21625 | 0.809137 | 2.20E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene21625 | 0.834222 | 3.40E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene21625 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene21625 | 0.824351 | 8.46E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene21625 | 0.810554 | 1.09E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene21625 | 0.883663 | 3.71E-71 | -1.69E-46 |
| MS.gene049633 | MS.gene21625 | 0.827396 | 1.60E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene21625 | 0.85685 | 2.43E-62 | -1.69E-46 |
| MS.gene050060 | MS.gene21625 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene21625 | 0.801234 | 9.91E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene21625 | 0.827405 | 1.59E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene21625 | -0.810527 | 1.10E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene21625 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene21625 | 0.864561 | 1.11E-64 | -1.69E-46 |
| MS.gene050625 | MS.gene21625 | 0.800401 | 1.47E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene21625 | 0.88232 | 1.15E-70 | -1.69E-46 |
| MS.gene050747 | MS.gene21625 | 0.840204 | 1.00E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene21625 | 0.855251 | 7.15E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene21625 | 0.837926 | 3.89E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene21625 | 0.819296 | 1.25E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene21625 | 0.899979 | 1.16E-77 | -1.69E-46 |
| MS.gene050868 | MS.gene21625 | 0.803799 | 2.93E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene21625 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene21625 | 0.835735 | 1.41E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene21625 | 0.896414 | 3.78E-76 | -1.69E-46 |
| MS.gene051360 | MS.gene21625 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene21625 | 0.82032 | 7.30E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene21625 | 0.863057 | 3.27E-64 | -1.69E-46 |
| MS.gene051617 | MS.gene21625 | 0.808581 | 2.89E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene21625 | 0.846801 | 1.73E-59 | -1.69E-46 |
| MS.gene051734 | MS.gene21625 | 0.855 | 8.46E-62 | -1.69E-46 |
| MS.gene051838 | MS.gene21625 | 0.901191 | 3.44E-78 | -1.69E-46 |
| MS.gene051858 | MS.gene21625 | 0.833872 | 4.16E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene21625 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene21625 | 0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene21625 | -0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene21625 | 0.859574 | 3.76E-63 | -1.69E-46 |
| MS.gene052135 | MS.gene21625 | 0.847957 | 8.32E-60 | -1.69E-46 |
| MS.gene052136 | MS.gene21625 | 0.855983 | 4.37E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene21625 | 0.806725 | 7.16E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene21625 | 0.845219 | 4.65E-59 | -1.69E-46 |
| MS.gene052253 | MS.gene21625 | 0.823126 | 1.64E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene21625 | 0.839648 | 1.40E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene21625 | 0.817692 | 2.89E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene21625 | 0.843632 | 1.24E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene21625 | 0.855774 | 5.03E-62 | -1.69E-46 |
| MS.gene05240 | MS.gene21625 | -0.811203 | 7.87E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene21625 | 0.896704 | 2.86E-76 | -1.69E-46 |
| MS.gene052421 | MS.gene21625 | 0.864216 | 1.43E-64 | -1.69E-46 |
| MS.gene052469 | MS.gene21625 | 0.830013 | 3.73E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene21625 | 0.860613 | 1.83E-63 | -1.69E-46 |
| MS.gene052484 | MS.gene21625 | 0.852097 | 5.77E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene21625 | 0.83747 | 5.10E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene21625 | 0.87417 | 8.32E-68 | -1.69E-46 |
| MS.gene052503 | MS.gene21625 | 0.839382 | 1.64E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene21625 | 0.879708 | 9.99E-70 | -1.69E-46 |
| MS.gene052615 | MS.gene21625 | 0.839294 | 1.73E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene21625 | 0.829744 | 4.34E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene21625 | 0.82794 | 1.19E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene21625 | 0.846436 | 2.17E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene21625 | 0.84351 | 1.34E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene21625 | 0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene21625 | 0.86806 | 8.64E-66 | -1.69E-46 |
| MS.gene052999 | MS.gene21625 | 0.819101 | 1.39E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene21625 | 0.829827 | 4.14E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene21625 | 0.830399 | 3.00E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene21625 | 0.854715 | 1.02E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene21625 | 0.84768 | 9.92E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene21625 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene21625 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene21625 | 0.839825 | 1.26E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene21625 | 0.801131 | 1.04E-48 | -1.69E-46 |
| MS.gene053480 | MS.gene21625 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene21625 | 0.843719 | 1.18E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene21625 | 0.804557 | 2.04E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene21625 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene21625 | 0.868358 | 6.93E-66 | -1.69E-46 |
| MS.gene053912 | MS.gene21625 | 0.829134 | 6.10E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene21625 | 0.835028 | 2.13E-56 | -1.69E-46 |
| MS.gene054107 | MS.gene21625 | 0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene21625 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene21625 | 0.815909 | 7.26E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene21625 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene21625 | 0.818458 | 1.94E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene21625 | 0.818346 | 2.06E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene21625 | -0.842462 | 2.55E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene21625 | 0.849754 | 2.64E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene21625 | 0.853416 | 2.42E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene21625 | 0.855859 | 4.75E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene21625 | 0.854541 | 1.15E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene21625 | 0.870295 | 1.63E-66 | -1.69E-46 |
| MS.gene055224 | MS.gene21625 | 0.858661 | 7.07E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene21625 | 0.858464 | 8.09E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene21625 | 0.817476 | 3.23E-52 | -1.69E-46 |
| MS.gene055370 | MS.gene21625 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene21625 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene21625 | 0.805904 | 1.07E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene21625 | 0.864226 | 1.42E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene21625 | 0.844509 | 7.23E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene21625 | 0.831419 | 1.69E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene21625 | 0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene055741 | MS.gene21625 | 0.883149 | 5.73E-71 | -1.69E-46 |
| MS.gene055744 | MS.gene21625 | 0.883103 | 5.96E-71 | -1.69E-46 |
| MS.gene05589 | MS.gene21625 | 0.822897 | 1.85E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene21625 | 0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene21625 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene21625 | 0.811892 | 5.58E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene21625 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene21625 | 0.84413 | 9.15E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene21625 | 0.806868 | 6.67E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene21625 | 0.864177 | 1.47E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene21625 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene21625 | 0.832509 | 9.08E-56 | -1.69E-46 |
| MS.gene056877 | MS.gene21625 | 0.851289 | 9.78E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene21625 | 0.820627 | 6.21E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene21625 | 0.825967 | 3.51E-54 | -1.69E-46 |
| MS.gene057048 | MS.gene21625 | 0.843426 | 1.41E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene21625 | 0.875343 | 3.32E-68 | -1.69E-46 |
| MS.gene057124 | MS.gene21625 | 0.892066 | 2.24E-74 | -1.69E-46 |
| MS.gene057196 | MS.gene21625 | 0.840651 | 7.65E-58 | -1.69E-46 |
| MS.gene057289 | MS.gene21625 | 0.827545 | 1.47E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene21625 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene21625 | 0.825408 | 4.76E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene21625 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene21625 | 0.827712 | 1.34E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene21625 | 0.851752 | 7.23E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene21625 | 0.842729 | 2.17E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene21625 | 0.839988 | 1.14E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene21625 | 0.847796 | 9.22E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene21625 | 0.877676 | 5.19E-69 | -1.69E-46 |
| MS.gene057857 | MS.gene21625 | 0.811657 | 6.28E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene21625 | 0.838812 | 2.30E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene21625 | 0.811576 | 6.53E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene21625 | 0.827336 | 1.65E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene21625 | 0.819815 | 9.53E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene21625 | 0.846752 | 1.78E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene21625 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene21625 | 0.869174 | 3.77E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene21625 | 0.832544 | 8.90E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene21625 | 0.81554 | 8.78E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene21625 | 0.888554 | 5.33E-73 | -1.69E-46 |
| MS.gene058700 | MS.gene21625 | 0.862922 | 3.59E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene21625 | 0.86646 | 2.81E-65 | -1.69E-46 |
| MS.gene058928 | MS.gene21625 | 0.827428 | 1.57E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene21625 | 0.830853 | 2.32E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene21625 | 0.815925 | 7.20E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene21625 | 0.857296 | 1.80E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene21625 | 0.816409 | 5.61E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene21625 | 0.811866 | 5.65E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene21625 | 0.846298 | 2.37E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene21625 | 0.811275 | 7.60E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene21625 | 0.83807 | 3.58E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene21625 | 0.851387 | 9.17E-61 | -1.69E-46 |
| MS.gene059512 | MS.gene21625 | 0.806844 | 6.75E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene21625 | 0.824985 | 6.00E-54 | -1.69E-46 |
| MS.gene059674 | MS.gene21625 | 0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene21625 | 0.820109 | 8.16E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene21625 | 0.856044 | 4.20E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene21625 | 0.851399 | 9.10E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene21625 | 0.852079 | 5.84E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene21625 | 0.815437 | 9.25E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene21625 | 0.809099 | 2.24E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene21625 | 0.828197 | 1.03E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene21625 | 0.830399 | 3.00E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene21625 | 0.850595 | 1.53E-60 | -1.69E-46 |
| MS.gene060469 | MS.gene21625 | 0.816145 | 6.43E-52 | -1.69E-46 |
| MS.gene060485 | MS.gene21625 | 0.80498 | 1.67E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene21625 | 0.818687 | 1.72E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene21625 | 0.841268 | 5.27E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene21625 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene21625 | 0.891286 | 4.56E-74 | -1.69E-46 |
| MS.gene060837 | MS.gene21625 | 0.861619 | 9.04E-64 | -1.69E-46 |
| MS.gene06092 | MS.gene21625 | 0.85465 | 1.07E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene21625 | 0.813391 | 2.62E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene21625 | 0.886615 | 2.93E-72 | -1.69E-46 |
| MS.gene061231 | MS.gene21625 | 0.834617 | 2.70E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21625.t1 | MTR_5g010090 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 721 |
| MS.gene21625.t1 | MTR_1g082360 | 53.257 | 261 | 118 | 3 | 82 | 340 | 5 | 263 | 3.18e-93 | 280 |
| MS.gene21625.t1 | MTR_7g113920 | 50.916 | 273 | 126 | 4 | 82 | 350 | 37 | 305 | 2.01e-89 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21625.t1 | AT3G05170 | 55.263 | 266 | 111 | 4 | 82 | 343 | 9 | 270 | 5.28e-96 | 288 |
| MS.gene21625.t1 | AT1G08940 | 52.893 | 242 | 108 | 2 | 82 | 319 | 9 | 248 | 4.89e-88 | 266 |
Find 77 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTTGTGAGGCCTATTT+TGG | 0.129826 | 5.2:-3478735 | None:intergenic |
| AAAGCGCAACGCCATCTTTA+TGG | 0.148714 | 5.2:+3479110 | MS.gene21625:CDS |
| TTCGAGGGTCTCAACAATTT+TGG | 0.181594 | 5.2:+3479767 | MS.gene21625:CDS |
| CTAACAAGAATTATTCTTCT+AGG | 0.216607 | 5.2:-3478656 | None:intergenic |
| TTCTTATGAGATGGTATAAA+TGG | 0.250801 | 5.2:+3479732 | MS.gene21625:CDS |
| GCAAACAGAAGCCAACAAAA+AGG | 0.310141 | 5.2:+3480309 | MS.gene21625:CDS |
| GTTTCAAGAGTCCTTCTATA+TGG | 0.322885 | 5.2:-3478851 | None:intergenic |
| GAACAAGAGTTAAGACAGTT+TGG | 0.341634 | 5.2:+3480074 | MS.gene21625:CDS |
| AAAACGATGGTGATGAAAAT+TGG | 0.343036 | 5.2:+3478807 | MS.gene21625:CDS |
| TTTGAACGTTCAAGAATTGC+TGG | 0.343872 | 5.2:+3478896 | MS.gene21625:CDS |
| CAGATTCACCATTTGGAAAT+CGG | 0.366998 | 5.2:-3479145 | None:intergenic |
| CGGATTAGAGAACAAGATTT+CGG | 0.376273 | 5.2:+3478935 | MS.gene21625:CDS |
| CTAAGAGCAGATATTAATAT+TGG | 0.377004 | 5.2:+3479632 | MS.gene21625:CDS |
| AGAATTATTCTTCTAGGCCT+TGG | 0.386052 | 5.2:-3478650 | None:intergenic |
| TTTATGTGTCTCCATATAGA+AGG | 0.387162 | 5.2:+3478840 | MS.gene21625:CDS |
| TCAGCCGCAGATTCACCATT+TGG | 0.423620 | 5.2:-3479152 | None:intergenic |
| AGGGTACCTGATCCCAAAAT+AGG | 0.433029 | 5.2:+3478722 | MS.gene21625:CDS |
| AGAATAATTCGACTTAGTGT+TGG | 0.442612 | 5.2:-3478477 | None:intergenic |
| GAATAATTCGACTTAGTGTT+GGG | 0.449186 | 5.2:-3478476 | None:intergenic |
| CAACGTTGGAGGCTAGTAAA+GGG | 0.458660 | 5.2:-3478616 | None:intergenic |
| AGGCGAGCTTGTCATGGAAA+AGG | 0.462117 | 5.2:+3479796 | MS.gene21625:CDS |
| AAAATAGGCCTCACAAATAG+AGG | 0.464701 | 5.2:+3478737 | MS.gene21625:CDS |
| TGAGAGTGGTAGTGATGTTA+TGG | 0.472388 | 5.2:-3478423 | None:intergenic |
| TTGTTGGTTAGTGAATCTAC+AGG | 0.473287 | 5.2:-3478551 | None:intergenic |
| CCTGGTACGTCCATTGTTGT+TGG | 0.484419 | 5.2:-3478567 | None:intergenic |
| CACATCAAAATTCTTCTCCC+CGG | 0.485925 | 5.2:-3479669 | None:intergenic |
| AGCAATTCTTGAACGTTCAA+AGG | 0.486540 | 5.2:-3478894 | None:intergenic |
| CAGTCGTAATTCAGATCAGC+AGG | 0.495868 | 5.2:-3480246 | None:intergenic |
| TTCATGAAGATGAGGAAAGA+AGG | 0.501116 | 5.2:-3480283 | None:intergenic |
| ACATCAAAATTCTTCTCCCC+GGG | 0.506903 | 5.2:-3479668 | None:intergenic |
| CTTGTCATGGAAAAGGGTTA+TGG | 0.507893 | 5.2:+3479803 | MS.gene21625:CDS |
| GCAATTCTTGAACGTTCAAA+GGG | 0.518725 | 5.2:-3478893 | None:intergenic |
| ATTATTCTTCTAGGCCTTGG+AGG | 0.521959 | 5.2:-3478647 | None:intergenic |
| GGCGAGCTTGTCATGGAAAA+GGG | 0.526104 | 5.2:+3479797 | MS.gene21625:CDS |
| TCAACGTTGGAGGCTAGTAA+AGG | 0.527993 | 5.2:-3478617 | None:intergenic |
| CAATGGAGGCGAGCTTGTCA+TGG | 0.534795 | 5.2:+3479790 | MS.gene21625:CDS |
| AAAAGAAACGACCATAAAGA+TGG | 0.541482 | 5.2:-3479121 | None:intergenic |
| TTTGCTTCTTCATGAAGATG+AGG | 0.541787 | 5.2:-3480291 | None:intergenic |
| CCAACAACAATGGACGTACC+AGG | 0.544308 | 5.2:+3478567 | MS.gene21625:CDS |
| TAGGCCTCACAAATAGAGGT+AGG | 0.550075 | 5.2:+3478741 | MS.gene21625:CDS |
| TAGAGGTAGGGTTCAAGCAG+AGG | 0.554848 | 5.2:+3478754 | MS.gene21625:CDS |
| AGGTACTACATCAACGTTGG+AGG | 0.554951 | 5.2:-3478627 | None:intergenic |
| AAATGCTGATTGATCAAGAA+TGG | 0.556731 | 5.2:+3480108 | MS.gene21625:CDS |
| GATGTATACGATAGAATCAC+AGG | 0.560616 | 5.2:+3479173 | MS.gene21625:CDS |
| CTGGATTCAGAGAAGAGCCT+CGG | 0.566562 | 5.2:+3478915 | MS.gene21625:CDS |
| TGGAAAAGGGTTATGGTGGA+AGG | 0.567955 | 5.2:+3479810 | MS.gene21625:CDS |
| TGTGAAGGCATAAATTTGCA+AGG | 0.571714 | 5.2:+3480223 | MS.gene21625:intron |
| ATGGACGGTTGAACAATTCG+AGG | 0.572004 | 5.2:+3479751 | MS.gene21625:CDS |
| GAACCCTACCTCTATTTGTG+AGG | 0.573197 | 5.2:-3478745 | None:intergenic |
| AGAATAATTCTTGTTAGACA+TGG | 0.574414 | 5.2:+3478662 | MS.gene21625:CDS |
| GGAAAGAAGGAATTCACCAT+TGG | 0.584379 | 5.2:-3480270 | None:intergenic |
| TTAGACATGGAGAGAGTGAA+GGG | 0.586434 | 5.2:+3478675 | MS.gene21625:CDS |
| TGTTGGTTAGTGAATCTACA+GGG | 0.593467 | 5.2:-3478550 | None:intergenic |
| AACTTGGTCATCGTGTCACA+TGG | 0.596674 | 5.2:+3479692 | MS.gene21625:CDS |
| AGGCCTCACAAATAGAGGTA+GGG | 0.600664 | 5.2:+3478742 | MS.gene21625:CDS |
| GTTAGACATGGAGAGAGTGA+AGG | 0.602338 | 5.2:+3478674 | MS.gene21625:CDS |
| TATGAGATGGTATAAATGGA+CGG | 0.602499 | 5.2:+3479736 | MS.gene21625:CDS |
| TCAAAATTCTTCTCCCCGGG+TGG | 0.603303 | 5.2:-3479665 | None:intergenic |
| ATTGGACGGTATCAGCCACC+CGG | 0.616558 | 5.2:+3479650 | MS.gene21625:CDS |
| GCTAGTAAAGGGTTTATCAG+AGG | 0.616669 | 5.2:-3478605 | None:intergenic |
| AGGGTTCAAGCAGAGGAATG+TGG | 0.617736 | 5.2:+3478761 | MS.gene21625:CDS |
| TGGAGAGAGTGAAGGGAACG+TGG | 0.618176 | 5.2:+3478682 | MS.gene21625:CDS |
| TTGGACGGTATCAGCCACCC+GGG | 0.618733 | 5.2:+3479651 | MS.gene21625:CDS |
| GTCATGGAAAAGGGTTATGG+TGG | 0.622098 | 5.2:+3479806 | MS.gene21625:CDS |
| GATTCACTAACCAACAACAA+TGG | 0.627276 | 5.2:+3478557 | MS.gene21625:CDS |
| GAGCAGATATTAATATTGGA+CGG | 0.627676 | 5.2:+3479636 | MS.gene21625:CDS |
| TGGAGGTACTACATCAACGT+TGG | 0.645433 | 5.2:-3478630 | None:intergenic |
| ACGTTGATGTAGTACCTCCA+AGG | 0.654374 | 5.2:+3478633 | MS.gene21625:CDS |
| AAATCTTGTTCTCTAATCCG+AGG | 0.657767 | 5.2:-3478932 | None:intergenic |
| ATTTCCAAATGGTGAATCTG+CGG | 0.660166 | 5.2:+3479148 | MS.gene21625:CDS |
| TGGATGAGAGTGTTTACACA+AGG | 0.666652 | 5.2:+3478702 | MS.gene21625:CDS |
| TGGACGGTTGAACAATTCGA+GGG | 0.667400 | 5.2:+3479752 | MS.gene21625:CDS |
| AAGAACATGATTGAAAACGA+TGG | 0.668419 | 5.2:+3478794 | MS.gene21625:CDS |
| TCTGAATTACGACTGTCCAA+TGG | 0.669531 | 5.2:+3480254 | MS.gene21625:CDS |
| TTCTGTTGAGATACTGAGAG+TGG | 0.675907 | 5.2:-3478437 | None:intergenic |
| TGGACGGTATCAGCCACCCG+GGG | 0.707455 | 5.2:+3479652 | MS.gene21625:CDS |
| GGATGAGAGTGTTTACACAA+GGG | 0.722988 | 5.2:+3478703 | MS.gene21625:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATACTGATTTATATGA+TGG | + | chr5.2:3480194-3480213 | MS.gene21625:intron | 15.0% |
| !!! | TTTACATACTCTTTATTTAA+CGG | - | chr5.2:3479265-3479284 | None:intergenic | 15.0% |
| !!! | TTTTCATCATTTGTAAATTA+AGG | + | chr5.2:3479999-3480018 | MS.gene21625:intron | 15.0% |
| !! | AGAAACTATGAGTAATAATT+AGG | - | chr5.2:3480152-3480171 | None:intergenic | 20.0% |
| !! | TATGATTAACAATCTAATGT+TGG | + | chr5.2:3479576-3479595 | MS.gene21625:intron | 20.0% |
| !! | TTCATATATATACTATCTTG+CGG | + | chr5.2:3479357-3479376 | MS.gene21625:intron | 20.0% |
| !! | TTGTGATTTATGTTATGTAA+GGG | + | chr5.2:3479054-3479073 | MS.gene21625:intron | 20.0% |
| !! | TTTGTGATTTATGTTATGTA+AGG | + | chr5.2:3479053-3479072 | MS.gene21625:intron | 20.0% |
| !!! | AATAATGGAGTTTATAAAGT+CGG | - | chr5.2:3479428-3479447 | None:intergenic | 20.0% |
| ! | AATCATACTTGAATATTGCA+AGG | - | chr5.2:3479563-3479582 | None:intergenic | 25.0% |
| ! | AGAATAATTCTTGTTAGACA+TGG | + | chr5.2:3478662-3478681 | MS.gene21625:CDS | 25.0% |
| ! | CTAACAAGAATTATTCTTCT+AGG | - | chr5.2:3478659-3478678 | None:intergenic | 25.0% |
| ! | CTAAGAGCAGATATTAATAT+TGG | + | chr5.2:3479632-3479651 | MS.gene21625:CDS | 25.0% |
| ! | GTAAAGTTAATCAACTGATT+AGG | + | chr5.2:3479280-3479299 | MS.gene21625:intron | 25.0% |
| ! | TACCTGTTAAATTTGTAATG+TGG | - | chr5.2:3480032-3480051 | None:intergenic | 25.0% |
| ! | TCATCGGTCATATTTAATAA+TGG | - | chr5.2:3479443-3479462 | None:intergenic | 25.0% |
| ! | TGGATTTGATATTGATACAT+AGG | + | chr5.2:3479596-3479615 | MS.gene21625:intron | 25.0% |
| ! | TTCCACATTACAAATTTAAC+AGG | + | chr5.2:3480027-3480046 | MS.gene21625:intron | 25.0% |
| ! | TTCTTATGAGATGGTATAAA+TGG | + | chr5.2:3479732-3479751 | MS.gene21625:CDS | 25.0% |
| !! | TAGTTTTCTGTCTTGTATAT+TGG | + | chr5.2:3479003-3479022 | MS.gene21625:intron | 25.0% |
| !! | TTAGAGTTTTTCTTATGAGA+TGG | + | chr5.2:3479723-3479742 | MS.gene21625:CDS | 25.0% |
| !!! | TATATGAAGCTTGTTGAAAA+TGG | - | chr5.2:3479345-3479364 | None:intergenic | 25.0% |
| AAAAGAAACGACCATAAAGA+TGG | - | chr5.2:3479124-3479143 | None:intergenic | 30.0% | |
| AAGAACATGATTGAAAACGA+TGG | + | chr5.2:3478794-3478813 | MS.gene21625:CDS | 30.0% | |
| ACAAGACAGAAAACTAAACT+AGG | - | chr5.2:3478999-3479018 | None:intergenic | 30.0% | |
| AGAATAATTCGACTTAGTGT+TGG | - | chr5.2:3478480-3478499 | None:intergenic | 30.0% | |
| ATATGATGGTCAATTTGTGA+AGG | + | chr5.2:3480208-3480227 | MS.gene21625:intron | 30.0% | |
| GAATAATTCGACTTAGTGTT+GGG | - | chr5.2:3478479-3478498 | None:intergenic | 30.0% | |
| GAGCAGATATTAATATTGGA+CGG | + | chr5.2:3479636-3479655 | MS.gene21625:CDS | 30.0% | |
| GTCGGTTATTATTGTTAGTT+CGG | - | chr5.2:3479410-3479429 | None:intergenic | 30.0% | |
| TAAATAAAAGTCTGCGATCA+AGG | - | chr5.2:3479531-3479550 | None:intergenic | 30.0% | |
| TATGAGATGGTATAAATGGA+CGG | + | chr5.2:3479736-3479755 | MS.gene21625:CDS | 30.0% | |
| TGACTATAATTGAGGTTCAT+CGG | - | chr5.2:3479459-3479478 | None:intergenic | 30.0% | |
| TTTATGTGTCTCCATATAGA+AGG | + | chr5.2:3478840-3478859 | MS.gene21625:CDS | 30.0% | |
| ! | AAAACGATGGTGATGAAAAT+TGG | + | chr5.2:3478807-3478826 | MS.gene21625:CDS | 30.0% |
| ! | AAATGCTGATTGATCAAGAA+TGG | + | chr5.2:3480108-3480127 | MS.gene21625:CDS | 30.0% |
| ! | TTTATCAGAGGATTTTTCTC+TGG | - | chr5.2:3478596-3478615 | None:intergenic | 30.0% |
| !! | GAAGAATTTTGATGTGAACT+TGG | + | chr5.2:3479676-3479695 | MS.gene21625:CDS | 30.0% |
| !!! | TTCTTTTACCGATTTCCAAA+TGG | + | chr5.2:3479137-3479156 | MS.gene21625:CDS | 30.0% |
| AAAATAGGCCTCACAAATAG+AGG | + | chr5.2:3478737-3478756 | MS.gene21625:CDS | 35.0% | |
| AAACATCAGTTGCTATAGAG+AGG | - | chr5.2:3479853-3479872 | None:intergenic | 35.0% | |
| AAATCTTGTTCTCTAATCCG+AGG | - | chr5.2:3478935-3478954 | None:intergenic | 35.0% | |
| AGAATTATTCTTCTAGGCCT+TGG | - | chr5.2:3478653-3478672 | None:intergenic | 35.0% | |
| AGCAATTCTTGAACGTTCAA+AGG | - | chr5.2:3478897-3478916 | None:intergenic | 35.0% | |
| ATTTCCAAATGGTGAATCTG+CGG | + | chr5.2:3479148-3479167 | MS.gene21625:CDS | 35.0% | |
| CAAACAGAAGCCAACAAAAA+GGG | + | chr5.2:3480310-3480329 | MS.gene21625:CDS | 35.0% | |
| CAGATTCACCATTTGGAAAT+CGG | - | chr5.2:3479148-3479167 | None:intergenic | 35.0% | |
| GAACAAGAGTTAAGACAGTT+TGG | + | chr5.2:3480074-3480093 | MS.gene21625:CDS | 35.0% | |
| GATGTATACGATAGAATCAC+AGG | + | chr5.2:3479173-3479192 | MS.gene21625:CDS | 35.0% | |
| GATTCACTAACCAACAACAA+TGG | + | chr5.2:3478557-3478576 | MS.gene21625:CDS | 35.0% | |
| GCAATTCTTGAACGTTCAAA+GGG | - | chr5.2:3478896-3478915 | None:intergenic | 35.0% | |
| GTTTCAAGAGTCCTTCTATA+TGG | - | chr5.2:3478854-3478873 | None:intergenic | 35.0% | |
| TCTCTATAGCAACTGATGTT+TGG | + | chr5.2:3479852-3479871 | MS.gene21625:intron | 35.0% | |
| TTATTGTTAGTTCGGCTCAA+TGG | - | chr5.2:3479402-3479421 | None:intergenic | 35.0% | |
| TTCATGAAGATGAGGAAAGA+AGG | - | chr5.2:3480286-3480305 | None:intergenic | 35.0% | |
| TTTGAACGTTCAAGAATTGC+TGG | + | chr5.2:3478896-3478915 | MS.gene21625:CDS | 35.0% | |
| TTTGCTTCTTCATGAAGATG+AGG | - | chr5.2:3480294-3480313 | None:intergenic | 35.0% | |
| ! | CGGATTAGAGAACAAGATTT+CGG | + | chr5.2:3478935-3478954 | MS.gene21625:CDS | 35.0% |
| ! | CTATTTGTGAGGCCTATTTT+GGG | - | chr5.2:3478737-3478756 | None:intergenic | 35.0% |
| ! | TCTATTTGTGAGGCCTATTT+TGG | - | chr5.2:3478738-3478757 | None:intergenic | 35.0% |
| ! | TGTGAAGGCATAAATTTGCA+AGG | + | chr5.2:3480223-3480242 | MS.gene21625:intron | 35.0% |
| ! | TGTTGGTTAGTGAATCTACA+GGG | - | chr5.2:3478553-3478572 | None:intergenic | 35.0% |
| ! | TTGTTGGTTAGTGAATCTAC+AGG | - | chr5.2:3478554-3478573 | None:intergenic | 35.0% |
| !! | CAACTGATTAGGTTTGTTAG+AGG | + | chr5.2:3479291-3479310 | MS.gene21625:intron | 35.0% |
| !! | TAGGTTTGTTAGAGGTAGTT+AGG | + | chr5.2:3479299-3479318 | MS.gene21625:intron | 35.0% |
| AACCTCAATTATAGTCACGC+TGG | + | chr5.2:3479462-3479481 | MS.gene21625:intron | 40.0% | |
| ACATCAAAATTCTTCTCCCC+GGG | - | chr5.2:3479671-3479690 | None:intergenic | 40.0% | |
| ACCTCAATTATAGTCACGCT+GGG | + | chr5.2:3479463-3479482 | MS.gene21625:intron | 40.0% | |
| AGCAACTGATGTTTGGTATC+TGG | + | chr5.2:3479859-3479878 | MS.gene21625:intron | 40.0% | |
| ATGTACACGACATTGATACG+TGG | - | chr5.2:3479944-3479963 | None:intergenic | 40.0% | |
| ATTATTCTTCTAGGCCTTGG+AGG | - | chr5.2:3478650-3478669 | None:intergenic | 40.0% | |
| CACATCAAAATTCTTCTCCC+CGG | - | chr5.2:3479672-3479691 | None:intergenic | 40.0% | |
| CTTGTCATGGAAAAGGGTTA+TGG | + | chr5.2:3479803-3479822 | MS.gene21625:CDS | 40.0% | |
| GCAAACAGAAGCCAACAAAA+AGG | + | chr5.2:3480309-3480328 | MS.gene21625:CDS | 40.0% | |
| GCTAGTAAAGGGTTTATCAG+AGG | - | chr5.2:3478608-3478627 | None:intergenic | 40.0% | |
| GGAAAGAAGGAATTCACCAT+TGG | - | chr5.2:3480273-3480292 | None:intergenic | 40.0% | |
| TCTGAATTACGACTGTCCAA+TGG | + | chr5.2:3480254-3480273 | MS.gene21625:CDS | 40.0% | |
| TTAGACATGGAGAGAGTGAA+GGG | + | chr5.2:3478675-3478694 | MS.gene21625:CDS | 40.0% | |
| TTCTGTTGAGATACTGAGAG+TGG | - | chr5.2:3478440-3478459 | None:intergenic | 40.0% | |
| ! | GTGAATCTACAGGGTCTTTT+TGG | - | chr5.2:3478544-3478563 | None:intergenic | 40.0% |
| ! | TGAGAGTGGTAGTGATGTTA+TGG | - | chr5.2:3478426-3478445 | None:intergenic | 40.0% |
| ! | TTCGAGGGTCTCAACAATTT+TGG | + | chr5.2:3479767-3479786 | MS.gene21625:CDS | 40.0% |
| !! | AGGATTTTTCTCTGGAAACC+TGG | - | chr5.2:3478588-3478607 | None:intergenic | 40.0% |
| !! | CTCAACAATTTTGGCAATGG+AGG | + | chr5.2:3479776-3479795 | MS.gene21625:CDS | 40.0% |
| !! | GGATGAGAGTGTTTACACAA+GGG | + | chr5.2:3478703-3478722 | MS.gene21625:CDS | 40.0% |
| !! | GGTCTCAACAATTTTGGCAA+TGG | + | chr5.2:3479773-3479792 | MS.gene21625:CDS | 40.0% |
| !! | TGGATGAGAGTGTTTACACA+AGG | + | chr5.2:3478702-3478721 | MS.gene21625:CDS | 40.0% |
| !!! | CTTTTTGGCTGTGACAACAT+TGG | - | chr5.2:3478529-3478548 | None:intergenic | 40.0% |
| AAAGCGCAACGCCATCTTTA+TGG | + | chr5.2:3479110-3479129 | MS.gene21625:CDS | 45.0% | |
| AACTTGGTCATCGTGTCACA+TGG | + | chr5.2:3479692-3479711 | MS.gene21625:CDS | 45.0% | |
| ACGTTGATGTAGTACCTCCA+AGG | + | chr5.2:3478633-3478652 | MS.gene21625:CDS | 45.0% | |
| AGGCCTCACAAATAGAGGTA+GGG | + | chr5.2:3478742-3478761 | MS.gene21625:CDS | 45.0% | |
| AGGTACTACATCAACGTTGG+AGG | - | chr5.2:3478630-3478649 | None:intergenic | 45.0% | |
| ATGGACGGTTGAACAATTCG+AGG | + | chr5.2:3479751-3479770 | MS.gene21625:CDS | 45.0% | |
| CAACGTTGGAGGCTAGTAAA+GGG | - | chr5.2:3478619-3478638 | None:intergenic | 45.0% | |
| CAGTCGTAATTCAGATCAGC+AGG | - | chr5.2:3480249-3480268 | None:intergenic | 45.0% | |
| CCTCAATTATAGTCACGCTG+GGG | + | chr5.2:3479464-3479483 | MS.gene21625:intron | 45.0% | |
| GAACCCTACCTCTATTTGTG+AGG | - | chr5.2:3478748-3478767 | None:intergenic | 45.0% | |
| GGCTCAATGGCAACTAAACA+TGG | - | chr5.2:3479389-3479408 | None:intergenic | 45.0% | |
| GTCATGGAAAAGGGTTATGG+TGG | + | chr5.2:3479806-3479825 | MS.gene21625:CDS | 45.0% | |
| GTTAGACATGGAGAGAGTGA+AGG | + | chr5.2:3478674-3478693 | MS.gene21625:CDS | 45.0% | |
| TAGGCCTCACAAATAGAGGT+AGG | + | chr5.2:3478741-3478760 | MS.gene21625:CDS | 45.0% | |
| TCAACGTTGGAGGCTAGTAA+AGG | - | chr5.2:3478620-3478639 | None:intergenic | 45.0% | |
| TGGACGGTTGAACAATTCGA+GGG | + | chr5.2:3479752-3479771 | MS.gene21625:CDS | 45.0% | |
| ! | AGGGTACCTGATCCCAAAAT+AGG | + | chr5.2:3478722-3478741 | MS.gene21625:CDS | 45.0% |
| ! | TGGAAAAGGGTTATGGTGGA+AGG | + | chr5.2:3479810-3479829 | MS.gene21625:CDS | 45.0% |
| !! | TGGAGGTACTACATCAACGT+TGG | - | chr5.2:3478633-3478652 | None:intergenic | 45.0% |
| AGGCGAGCTTGTCATGGAAA+AGG | + | chr5.2:3479796-3479815 | MS.gene21625:CDS | 50.0% | |
| AGGGTTCAAGCAGAGGAATG+TGG | + | chr5.2:3478761-3478780 | MS.gene21625:CDS | 50.0% | |
| CCAACAACAATGGACGTACC+AGG | + | chr5.2:3478567-3478586 | MS.gene21625:CDS | 50.0% | |
| CCCCAGCGTGACTATAATTG+AGG | - | chr5.2:3479467-3479486 | None:intergenic | 50.0% | |
| CCTGGTACGTCCATTGTTGT+TGG | - | chr5.2:3478570-3478589 | None:intergenic | 50.0% | |
| CTGGATTCAGAGAAGAGCCT+CGG | + | chr5.2:3478915-3478934 | MS.gene21625:CDS | 50.0% | |
| GGCGAGCTTGTCATGGAAAA+GGG | + | chr5.2:3479797-3479816 | MS.gene21625:CDS | 50.0% | |
| TAGAGGTAGGGTTCAAGCAG+AGG | + | chr5.2:3478754-3478773 | MS.gene21625:CDS | 50.0% | |
| TCAAAATTCTTCTCCCCGGG+TGG | - | chr5.2:3479668-3479687 | None:intergenic | 50.0% | |
| TCAGCCGCAGATTCACCATT+TGG | - | chr5.2:3479155-3479174 | None:intergenic | 50.0% | |
| !! | GCTGGGGATTGCAGTTTTGT+AGG | + | chr5.2:3479480-3479499 | MS.gene21625:intron | 50.0% |
| !!! | GTGAGGCCTATTTTGGGATC+AGG | - | chr5.2:3478731-3478750 | None:intergenic | 50.0% |
| ATTGGACGGTATCAGCCACC+CGG | + | chr5.2:3479650-3479669 | MS.gene21625:CDS | 55.0% | |
| CAATGGAGGCGAGCTTGTCA+TGG | + | chr5.2:3479790-3479809 | MS.gene21625:CDS | 55.0% | |
| TGGAGAGAGTGAAGGGAACG+TGG | + | chr5.2:3478682-3478701 | MS.gene21625:CDS | 55.0% | |
| TTGGACGGTATCAGCCACCC+GGG | + | chr5.2:3479651-3479670 | MS.gene21625:CDS | 60.0% | |
| TGGACGGTATCAGCCACCCG+GGG | + | chr5.2:3479652-3479671 | MS.gene21625:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 3478413 | 3480335 | 3478413 | ID=MS.gene21625 |
| chr5.2 | mRNA | 3478413 | 3480335 | 3478413 | ID=MS.gene21625.t1;Parent=MS.gene21625 |
| chr5.2 | exon | 3478413 | 3478956 | 3478413 | ID=MS.gene21625.t1.exon1;Parent=MS.gene21625.t1 |
| chr5.2 | CDS | 3478413 | 3478956 | 3478413 | ID=cds.MS.gene21625.t1;Parent=MS.gene21625.t1 |
| chr5.2 | exon | 3479075 | 3479194 | 3479075 | ID=MS.gene21625.t1.exon2;Parent=MS.gene21625.t1 |
| chr5.2 | CDS | 3479075 | 3479194 | 3479075 | ID=cds.MS.gene21625.t1;Parent=MS.gene21625.t1 |
| chr5.2 | exon | 3479618 | 3479831 | 3479618 | ID=MS.gene21625.t1.exon3;Parent=MS.gene21625.t1 |
| chr5.2 | CDS | 3479618 | 3479831 | 3479618 | ID=cds.MS.gene21625.t1;Parent=MS.gene21625.t1 |
| chr5.2 | exon | 3480049 | 3480129 | 3480049 | ID=MS.gene21625.t1.exon4;Parent=MS.gene21625.t1 |
| chr5.2 | CDS | 3480049 | 3480129 | 3480049 | ID=cds.MS.gene21625.t1;Parent=MS.gene21625.t1 |
| chr5.2 | exon | 3480230 | 3480335 | 3480230 | ID=MS.gene21625.t1.exon5;Parent=MS.gene21625.t1 |
| chr5.2 | CDS | 3480230 | 3480335 | 3480230 | ID=cds.MS.gene21625.t1;Parent=MS.gene21625.t1 |
| Gene Sequence |
| Protein sequence |
