AlfalfaGEDB | MS.gene34496

M. sativa cultivar XinJiangDaYe / MS.gene34496

KEGG: -
GO: GO:0003674 GO:0005488 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0030001 GO:0043167 GO:0043169 GO:0046872 GO:0051179 GO:0051234
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34496.t1	XP_013469663.1	100	76	0	0	1	76	1	76	1.20E-29	139

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34496.t1	O03982	53.4	73	32	2	4	75	2	73	3.1e-10	65.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34496.t1	G8A218	100.0	76	0	0	1	76	1	76	8.6e-30	139.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049170	MS.gene34496	0.814999	1.16E-51	-1.69E-46
MS.gene049356	MS.gene34496	0.912766	1.34E-83	-1.69E-46
MS.gene049369	MS.gene34496	0.878955	1.85E-69	-1.69E-46
MS.gene049396	MS.gene34496	0.861303	1.13E-63	-1.69E-46
MS.gene049488	MS.gene34496	0.809633	1.72E-50	-1.69E-46
MS.gene049661	MS.gene34496	0.809513	1.82E-50	-1.69E-46
MS.gene049662	MS.gene34496	0.810135	1.34E-50	-1.69E-46
MS.gene049758	MS.gene34496	0.819393	1.19E-52	-1.69E-46
MS.gene049805	MS.gene34496	0.804806	1.81E-49	-1.69E-46
MS.gene050122	MS.gene34496	0.819419	1.17E-52	-1.69E-46
MS.gene050128	MS.gene34496	0.838512	2.75E-57	-1.69E-46
MS.gene050301	MS.gene34496	0.83447	2.94E-56	-1.69E-46
MS.gene050397	MS.gene34496	0.812084	5.06E-51	-1.69E-46
MS.gene050400	MS.gene34496	0.809471	1.86E-50	-1.69E-46
MS.gene050426	MS.gene34496	-0.834985	2.18E-56	-1.69E-46
MS.gene050432	MS.gene34496	0.802709	4.93E-49	-1.69E-46
MS.gene050464	MS.gene34496	0.814464	1.52E-51	-1.69E-46
MS.gene050529	MS.gene34496	0.8223	2.55E-53	-1.69E-46
MS.gene050593	MS.gene34496	0.821458	3.99E-53	-1.69E-46
MS.gene050670	MS.gene34496	0.917961	2.80E-86	-1.69E-46
MS.gene050971	MS.gene34496	0.883038	6.29E-71	-1.69E-46
MS.gene05105	MS.gene34496	0.885395	8.44E-72	-1.69E-46
MS.gene051360	MS.gene34496	0.860863	1.53E-63	-1.69E-46
MS.gene051387	MS.gene34496	0.823961	1.04E-53	-1.69E-46
MS.gene051521	MS.gene34496	0.837133	6.22E-57	-1.69E-46
MS.gene051525	MS.gene34496	0.834712	2.56E-56	-1.69E-46
MS.gene051605	MS.gene34496	0.804466	2.13E-49	-1.69E-46
MS.gene051666	MS.gene34496	0.820361	7.14E-53	-1.69E-46
MS.gene051692	MS.gene34496	0.808945	2.41E-50	-1.69E-46
MS.gene051860	MS.gene34496	0.812502	4.11E-51	-1.69E-46
MS.gene051874	MS.gene34496	0.811139	8.13E-51	-1.69E-46
MS.gene052011	MS.gene34496	-0.826574	2.52E-54	-1.69E-46
MS.gene052077	MS.gene34496	0.854744	1.00E-61	-1.69E-46
MS.gene052135	MS.gene34496	0.820096	8.22E-53	-1.69E-46
MS.gene052136	MS.gene34496	0.831214	1.89E-55	-1.69E-46
MS.gene052188	MS.gene34496	0.912512	1.79E-83	-1.69E-46
MS.gene052253	MS.gene34496	0.869473	3.02E-66	-1.69E-46
MS.gene052310	MS.gene34496	0.839406	1.62E-57	-1.69E-46
MS.gene052340	MS.gene34496	0.870063	1.94E-66	-1.69E-46
MS.gene052346	MS.gene34496	0.809434	1.90E-50	-1.69E-46
MS.gene052414	MS.gene34496	0.879711	9.97E-70	-1.69E-46
MS.gene052421	MS.gene34496	0.842505	2.48E-58	-1.69E-46
MS.gene052481	MS.gene34496	0.814323	1.63E-51	-1.69E-46
MS.gene052484	MS.gene34496	0.816192	6.28E-52	-1.69E-46
MS.gene052485	MS.gene34496	0.857188	1.93E-62	-1.69E-46
MS.gene052982	MS.gene34496	0.806454	8.16E-50	-1.69E-46
MS.gene052999	MS.gene34496	0.808097	3.66E-50	-1.69E-46
MS.gene053103	MS.gene34496	0.807801	4.23E-50	-1.69E-46
MS.gene053104	MS.gene34496	0.804176	2.45E-49	-1.69E-46
MS.gene053169	MS.gene34496	0.836978	6.81E-57	-1.69E-46
MS.gene05316	MS.gene34496	0.879435	1.25E-69	-1.69E-46
MS.gene053209	MS.gene34496	0.838043	3.63E-57	-1.69E-46
MS.gene053449	MS.gene34496	0.887394	1.48E-72	-1.69E-46
MS.gene053494	MS.gene34496	0.800525	1.38E-48	-1.69E-46
MS.gene053557	MS.gene34496	0.812724	3.67E-51	-1.69E-46
MS.gene053758	MS.gene34496	0.887619	1.22E-72	-1.69E-46
MS.gene053813	MS.gene34496	0.832392	9.70E-56	-1.69E-46
MS.gene053836	MS.gene34496	0.809429	1.90E-50	-1.69E-46
MS.gene053912	MS.gene34496	0.868515	6.17E-66	-1.69E-46
MS.gene053928	MS.gene34496	0.813365	2.66E-51	-1.69E-46
MS.gene054010	MS.gene34496	0.802593	5.21E-49	-1.69E-46
MS.gene054011	MS.gene34496	0.806565	7.73E-50	-1.69E-46
MS.gene054012	MS.gene34496	0.801801	7.59E-49	-1.69E-46
MS.gene054123	MS.gene34496	0.829027	6.48E-55	-1.69E-46
MS.gene054183	MS.gene34496	0.836352	9.84E-57	-1.69E-46
MS.gene054349	MS.gene34496	0.869285	3.47E-66	-1.69E-46
MS.gene054556	MS.gene34496	0.850735	1.40E-60	-1.69E-46
MS.gene054955	MS.gene34496	0.852041	5.99E-61	-1.69E-46
MS.gene05505	MS.gene34496	0.839721	1.34E-57	-1.69E-46
MS.gene055116	MS.gene34496	0.898354	5.76E-77	-1.69E-46
MS.gene055277	MS.gene34496	0.803774	2.97E-49	-1.69E-46
MS.gene055369	MS.gene34496	0.829062	6.35E-55	-1.69E-46
MS.gene055539	MS.gene34496	0.822421	2.39E-53	-1.69E-46
MS.gene05553	MS.gene34496	0.836057	1.17E-56	-1.69E-46
MS.gene055604	MS.gene34496	0.821465	3.98E-53	-1.69E-46
MS.gene055666	MS.gene34496	0.811721	6.08E-51	-1.69E-46
MS.gene055741	MS.gene34496	0.848886	4.60E-60	-1.69E-46
MS.gene055744	MS.gene34496	0.858052	1.07E-62	-1.69E-46
MS.gene055859	MS.gene34496	0.815943	7.13E-52	-1.69E-46
MS.gene055909	MS.gene34496	0.866587	2.56E-65	-1.69E-46
MS.gene055911	MS.gene34496	0.86613	3.57E-65	-1.69E-46
MS.gene05592	MS.gene34496	0.81285	3.45E-51	-1.69E-46
MS.gene056191	MS.gene34496	0.820978	5.15E-53	-1.69E-46
MS.gene056407	MS.gene34496	0.845298	4.43E-59	-1.69E-46
MS.gene056410	MS.gene34496	0.8127	3.72E-51	-1.69E-46
MS.gene056422	MS.gene34496	0.865579	5.33E-65	-1.69E-46
MS.gene056511	MS.gene34496	0.895074	1.35E-75	-1.69E-46
MS.gene056514	MS.gene34496	0.8048	1.82E-49	-1.69E-46
MS.gene056609	MS.gene34496	0.821321	4.30E-53	-1.69E-46
MS.gene05664	MS.gene34496	0.82673	2.31E-54	-1.69E-46
MS.gene056659	MS.gene34496	0.8513	9.71E-61	-1.69E-46
MS.gene05666	MS.gene34496	0.827237	1.75E-54	-1.69E-46
MS.gene056719	MS.gene34496	0.806955	6.40E-50	-1.69E-46
MS.gene056723	MS.gene34496	0.834308	3.23E-56	-1.69E-46
MS.gene056876	MS.gene34496	0.830173	3.41E-55	-1.69E-46
MS.gene056899	MS.gene34496	-0.802284	6.04E-49	-1.69E-46
MS.gene056902	MS.gene34496	0.817093	3.94E-52	-1.69E-46
MS.gene05702	MS.gene34496	0.813975	1.95E-51	-1.69E-46
MS.gene057076	MS.gene34496	0.823765	1.16E-53	-1.69E-46
MS.gene057124	MS.gene34496	0.873128	1.87E-67	-1.69E-46
MS.gene05735	MS.gene34496	0.822296	2.56E-53	-1.69E-46
MS.gene057396	MS.gene34496	0.873372	1.55E-67	-1.69E-46
MS.gene057448	MS.gene34496	0.865306	6.50E-65	-1.69E-46
MS.gene057449	MS.gene34496	0.861459	1.01E-63	-1.69E-46
MS.gene057450	MS.gene34496	0.858475	8.03E-63	-1.69E-46
MS.gene057476	MS.gene34496	0.802201	6.28E-49	-1.69E-46
MS.gene057537	MS.gene34496	0.868837	4.85E-66	-1.69E-46
MS.gene057609	MS.gene34496	0.810812	9.57E-51	-1.69E-46
MS.gene057610	MS.gene34496	0.840473	8.51E-58	-1.69E-46
MS.gene057734	MS.gene34496	0.865098	7.55E-65	-1.69E-46
MS.gene057749	MS.gene34496	0.857102	2.05E-62	-1.69E-46
MS.gene057796	MS.gene34496	0.805795	1.12E-49	-1.69E-46
MS.gene057823	MS.gene34496	0.859303	4.54E-63	-1.69E-46
MS.gene057856	MS.gene34496	0.805464	1.32E-49	-1.69E-46
MS.gene057926	MS.gene34496	0.801287	9.67E-49	-1.69E-46
MS.gene057927	MS.gene34496	0.839893	1.21E-57	-1.69E-46
MS.gene058002	MS.gene34496	0.82557	4.36E-54	-1.69E-46
MS.gene058007	MS.gene34496	0.879569	1.12E-69	-1.69E-46
MS.gene058075	MS.gene34496	0.856779	2.55E-62	-1.69E-46
MS.gene058082	MS.gene34496	0.830704	2.53E-55	-1.69E-46
MS.gene05811	MS.gene34496	0.82261	2.16E-53	-1.69E-46
MS.gene058120	MS.gene34496	0.837406	5.30E-57	-1.69E-46
MS.gene058365	MS.gene34496	0.834907	2.28E-56	-1.69E-46
MS.gene058376	MS.gene34496	0.836862	7.30E-57	-1.69E-46
MS.gene05842	MS.gene34496	0.810784	9.71E-51	-1.69E-46
MS.gene058444	MS.gene34496	0.813114	3.02E-51	-1.69E-46
MS.gene058459	MS.gene34496	0.80142	9.08E-49	-1.69E-46
MS.gene058660	MS.gene34496	0.828118	1.07E-54	-1.69E-46
MS.gene058700	MS.gene34496	0.850612	1.52E-60	-1.69E-46
MS.gene058710	MS.gene34496	0.812411	4.30E-51	-1.69E-46
MS.gene058790	MS.gene34496	0.807467	4.98E-50	-1.69E-46
MS.gene05886	MS.gene34496	0.807613	4.64E-50	-1.69E-46
MS.gene058928	MS.gene34496	0.881504	2.27E-70	-1.69E-46
MS.gene058948	MS.gene34496	0.843804	1.12E-58	-1.69E-46
MS.gene058949	MS.gene34496	0.842399	2.65E-58	-1.69E-46
MS.gene058995	MS.gene34496	0.81904	1.43E-52	-1.69E-46
MS.gene059011	MS.gene34496	0.824229	9.04E-54	-1.69E-46
MS.gene05907	MS.gene34496	0.860606	1.84E-63	-1.69E-46
MS.gene059082	MS.gene34496	0.817127	3.87E-52	-1.69E-46
MS.gene059285	MS.gene34496	0.851088	1.11E-60	-1.69E-46
MS.gene059294	MS.gene34496	0.848092	7.64E-60	-1.69E-46
MS.gene059366	MS.gene34496	0.896504	3.46E-76	-1.69E-46
MS.gene059368	MS.gene34496	0.83239	9.71E-56	-1.69E-46
MS.gene059402	MS.gene34496	-0.808395	3.16E-50	-1.69E-46
MS.gene059420	MS.gene34496	0.87897	1.82E-69	-1.69E-46
MS.gene059455	MS.gene34496	0.82393	1.06E-53	-1.69E-46
MS.gene059462	MS.gene34496	0.830802	2.39E-55	-1.69E-46
MS.gene059597	MS.gene34496	0.82334	1.46E-53	-1.69E-46
MS.gene059674	MS.gene34496	0.869035	4.18E-66	-1.69E-46
MS.gene059676	MS.gene34496	0.849212	3.74E-60	-1.69E-46
MS.gene059688	MS.gene34496	0.894155	3.22E-75	-1.69E-46
MS.gene059692	MS.gene34496	0.87876	2.16E-69	-1.69E-46
MS.gene059695	MS.gene34496	0.880442	5.47E-70	-1.69E-46
MS.gene059711	MS.gene34496	0.847199	1.34E-59	-1.69E-46
MS.gene059788	MS.gene34496	0.811916	5.51E-51	-1.69E-46
MS.gene059807	MS.gene34496	0.918235	2.00E-86	-1.69E-46
MS.gene05984	MS.gene34496	0.83712	6.27E-57	-1.69E-46
MS.gene05986	MS.gene34496	0.801785	7.64E-49	-1.69E-46
MS.gene059876	MS.gene34496	0.841129	5.73E-58	-1.69E-46
MS.gene059933	MS.gene34496	0.832968	6.98E-56	-1.69E-46
MS.gene060247	MS.gene34496	0.830645	2.61E-55	-1.69E-46
MS.gene060372	MS.gene34496	0.840287	9.52E-58	-1.69E-46
MS.gene06037	MS.gene34496	0.806561	7.75E-50	-1.69E-46
MS.gene060403	MS.gene34496	0.861525	9.65E-64	-1.69E-46
MS.gene060495	MS.gene34496	0.851146	1.07E-60	-1.69E-46
MS.gene060496	MS.gene34496	0.815254	1.02E-51	-1.69E-46
MS.gene060804	MS.gene34496	0.847872	8.78E-60	-1.69E-46
MS.gene060818	MS.gene34496	0.821536	3.83E-53	-1.69E-46
MS.gene060835	MS.gene34496	0.823167	1.60E-53	-1.69E-46
MS.gene060837	MS.gene34496	0.889571	2.15E-73	-1.69E-46
MS.gene060986	MS.gene34496	0.81414	1.79E-51	-1.69E-46
MS.gene061041	MS.gene34496	0.844457	7.47E-59	-1.69E-46
MS.gene061049	MS.gene34496	0.847723	9.66E-60	-1.69E-46
MS.gene061051	MS.gene34496	-0.867625	1.19E-65	-1.69E-46
MS.gene061154	MS.gene34496	0.884476	1.86E-71	-1.69E-46
MS.gene061159	MS.gene34496	0.813695	2.25E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34496.t1	MTR_1g100587	100.000	73	0	0	1	73	1	73	8.53e-34	112
MS.gene34496.t1	MTR_6g045257	87.671	73	9	0	4	76	3	75	5.66e-26	93.2
MS.gene34496.t1	MTR_8g098915	52.113	71	33	1	5	75	3	72	1.07e-17	72.8
MS.gene34496.t1	MTR_6g049260	45.333	75	40	1	5	79	3	76	1.69e-15	66.6
MS.gene34496.t1	MTR_6g051680	47.297	74	38	1	3	76	1	73	7.67e-15	65.1
MS.gene34496.t1	MTR_6g049320	48.571	70	35	1	4	73	32	100	3.12e-14	64.3
MS.gene34496.t1	MTR_1g099810	47.945	73	37	1	3	75	1	72	4.70e-14	63.5
MS.gene34496.t1	MTR_1g099800	47.945	73	37	1	3	75	1	72	6.64e-14	63.2
MS.gene34496.t1	MTR_6g049320	47.826	69	35	1	5	73	3	70	6.75e-14	62.8
MS.gene34496.t1	MTR_6g049280	47.143	70	36	1	4	73	32	100	7.91e-14	63.5
MS.gene34496.t1	MTR_6g049280	46.377	69	36	1	5	73	3	70	1.39e-13	62.0
MS.gene34496.t1	MTR_7g079110	49.275	69	34	1	3	71	1	68	1.64e-13	62.8
MS.gene34496.t1	MTR_3g434960	42.105	76	43	1	5	80	3	77	2.59e-13	60.8
MS.gene34496.t1	MTR_7g451210	43.243	74	41	1	5	78	3	75	2.89e-13	60.8
MS.gene34496.t1	MTR_3g434890	42.105	76	43	1	5	80	3	77	3.01e-13	60.8
MS.gene34496.t1	MTR_1g099640	52.055	73	34	1	4	76	2	73	4.55e-13	60.8
MS.gene34496.t1	MTR_6g051690	44.595	74	40	1	3	76	1	73	9.05e-13	60.1
MS.gene34496.t1	MTR_3g435000	39.706	68	41	0	13	80	14	81	1.45e-12	58.9
MS.gene34496.t1	MTR_8g098915	50.943	53	26	0	23	75	1	53	1.57e-12	58.9
MS.gene34496.t1	MTR_0795s0020	46.479	71	31	2	3	73	1	64	1.74e-12	59.3
MS.gene34496.t1	MTR_7g451200	40.789	76	44	1	5	80	3	77	2.10e-12	58.5
MS.gene34496.t1	MTR_1173s0010	40.789	76	44	1	5	80	3	77	2.17e-12	58.5
MS.gene34496.t1	MTR_1g099815	47.887	71	35	2	5	75	3	71	6.01e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34496.t1	AT5G23760	86.301	73	10	0	4	76	3	75	3.43e-24	88.6
MS.gene34496.t1	AT5G23760	84.375	64	10	0	13	76	1	64	2.87e-18	73.2
MS.gene34496.t1	AT5G52740	47.887	71	34	2	3	73	1	68	4.35e-11	55.5
MS.gene34496.t1	AT1G01490	44.118	102	43	3	3	91	1	101	6.37e-11	56.2
MS.gene34496.t1	AT1G01490	44.118	102	43	3	3	91	1	101	6.37e-11	56.2
MS.gene34496.t1	AT1G01490	45.000	100	41	3	5	91	30	128	6.75e-11	56.6

Find 11 sgRNAs with CRISPR-Local

Find 40 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACAGAAGTTAACAGTTAT+TGG	0.231458	1.2:+75356703	MS.gene34496:CDS
ATAGCAAAAGGTGGTGTTAA+AGG	0.319190	1.2:+75356475	MS.gene34496:intron
GTTAACAGTTATTGGCGAAA+TGG	0.409498	1.2:+75356711	MS.gene34496:CDS
GAAGCAGTTGCTGATATCTA+TGG	0.414404	1.2:+75356539	MS.gene34496:CDS
GTGAAGAAGCTGAAGAAAGT+AGG	0.441545	1.2:+75356748	MS.gene34496:CDS
TGAAGAAGCTGAAGAAAGTA+GGG	0.447970	1.2:+75356749	MS.gene34496:CDS
CGAAAGTAAAGACGAAAAGA+AGG	0.460664	1.2:+75356831	MS.gene34496:CDS
AAGGTAGATATAATATCAGT+TGG	0.509973	1.2:+75356772	MS.gene34496:CDS
CTTCCCTGTGACAATGGCTC+AGG	0.517352	1.2:+75356096	None:intergenic
GAAGCTGAAGAAAGTAGGGA+AGG	0.555805	1.2:+75356753	MS.gene34496:CDS
ACTGGATCCATAGCAAAAGG+TGG	0.684112	1.2:+75356466	MS.gene34496:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACTATTTTAAATTGTTTTTG+AGG	+	chr1.2:75356288-75356307	MS.gene34496:intron	15.0%
!!!	CTATTTTAAATTGTTTTTGA+GGG	+	chr1.2:75356289-75356308	MS.gene34496:intron	15.0%
!!!	AATTTAGTTTTCTGGTAAAT+TGG	-	chr1.2:75356589-75356608	None:intergenic	20.0%
!	AAGGTAGATATAATATCAGT+TGG	+	chr1.2:75356772-75356791	MS.gene34496:CDS	25.0%
!!!	AAATTGTTTTTGAGGGAATT+TGG	+	chr1.2:75356296-75356315	MS.gene34496:intron	25.0%
!!!	TTCTTCTTTTTTCTCTTCTT+TGG	-	chr1.2:75356803-75356822	None:intergenic	25.0%
	AAAATGAATATATGCGCACA+TGG	-	chr1.2:75356184-75356203	None:intergenic	30.0%
	AAAGAAGGAAGAGAAAAAAG+AGG	+	chr1.2:75356846-75356865	MS.gene34496:CDS	30.0%
	AAATTCATCTGTGTAACTGT+TGG	+	chr1.2:75356637-75356656	MS.gene34496:intron	30.0%
	ACATAAGAGGATAGAAAAAG+TGG	-	chr1.2:75356424-75356443	None:intergenic	30.0%
	ATCTATCTCTTGAGGTTATA+AGG	+	chr1.2:75356320-75356339	MS.gene34496:intron	30.0%
	ATTCCATTAATGTGTTTCCA+GGG	-	chr1.2:75356616-75356635	None:intergenic	30.0%
	CATATTGAGACAAACATAAG+AGG	-	chr1.2:75356437-75356456	None:intergenic	30.0%
	GAACAGAAGTTAACAGTTAT+TGG	+	chr1.2:75356703-75356722	MS.gene34496:CDS	30.0%
	TATTCCATTAATGTGTTTCC+AGG	-	chr1.2:75356617-75356636	None:intergenic	30.0%
!	AATTTGGAATCTATCTCTTG+AGG	+	chr1.2:75356312-75356331	MS.gene34496:intron	30.0%
	ACTGTTGGTACTCTTATAAC+AGG	+	chr1.2:75356652-75356671	MS.gene34496:intron	35.0%
	AGAAAACTAAATTTCTGCCC+TGG	+	chr1.2:75356596-75356615	MS.gene34496:intron	35.0%
	AGGTATGGATTCTCTCATTT+GGG	+	chr1.2:75356116-75356135	MS.gene34496:intron	35.0%
	CGAAAGTAAAGACGAAAAGA+AGG	+	chr1.2:75356831-75356850	MS.gene34496:CDS	35.0%
	GAAAAAAGAGGAGAAACAAG+AGG	+	chr1.2:75356858-75356877	MS.gene34496:CDS	35.0%
	GTTAACAGTTATTGGCGAAA+TGG	+	chr1.2:75356711-75356730	MS.gene34496:CDS	35.0%
	TGAAGAAGCTGAAGAAAGTA+GGG	+	chr1.2:75356749-75356768	MS.gene34496:CDS	35.0%
!	ATAGCAAAAGGTGGTGTTAA+AGG	+	chr1.2:75356475-75356494	MS.gene34496:intron	35.0%
!	TTTAACACCACCTTTTGCTA+TGG	-	chr1.2:75356476-75356495	None:intergenic	35.0%
!!!	AGGGCAGAAATTTAGTTTTC+TGG	-	chr1.2:75356597-75356616	None:intergenic	35.0%
!!!	TCTTTTTTCTCTTCTTTGGC+AGG	-	chr1.2:75356799-75356818	None:intergenic	35.0%
	CAGGTATGGATTCTCTCATT+TGG	+	chr1.2:75356115-75356134	MS.gene34496:intron	40.0%
	CTATAACCAAACAGTACACG+AGG	-	chr1.2:75356368-75356387	None:intergenic	40.0%
	GAAGCAGTTGCTGATATCTA+TGG	+	chr1.2:75356539-75356558	MS.gene34496:CDS	40.0%
	GTGAAGAAGCTGAAGAAAGT+AGG	+	chr1.2:75356748-75356767	MS.gene34496:CDS	40.0%
	TGAATATATGCGCACATGGA+TGG	-	chr1.2:75356180-75356199	None:intergenic	40.0%
!!	TTTTGCTATGGATCCAGTGA+GGG	-	chr1.2:75356464-75356483	None:intergenic	40.0%
	ACTGGATCCATAGCAAAAGG+TGG	+	chr1.2:75356466-75356485	MS.gene34496:intron	45.0%
	CTCAATATGATGTCCCTCAC+TGG	+	chr1.2:75356448-75356467	MS.gene34496:intron	45.0%
	CTCACTGGATCCATAGCAAA+AGG	+	chr1.2:75356463-75356482	MS.gene34496:intron	45.0%
	CTGCCCTGGAAACACATTAA+TGG	+	chr1.2:75356610-75356629	MS.gene34496:intron	45.0%
	GAAGCTGAAGAAAGTAGGGA+AGG	+	chr1.2:75356753-75356772	MS.gene34496:CDS	45.0%
!!	CTTTTGCTATGGATCCAGTG+AGG	-	chr1.2:75356465-75356484	None:intergenic	45.0%
	CTGACGCCTCGTGTACTGTT+TGG	+	chr1.2:75356359-75356378	MS.gene34496:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	75356109	75356891	75356109	ID=MS.gene34496
chr1.2	mRNA	75356109	75356891	75356109	ID=MS.gene34496.t1;Parent=MS.gene34496
chr1.2	exon	75356109	75356117	75356109	ID=MS.gene34496.t1.exon1;Parent=MS.gene34496.t1
chr1.2	CDS	75356109	75356117	75356109	ID=cds.MS.gene34496.t1;Parent=MS.gene34496.t1
chr1.2	exon	75356479	75356560	75356479	ID=MS.gene34496.t1.exon2;Parent=MS.gene34496.t1
chr1.2	CDS	75356479	75356560	75356479	ID=cds.MS.gene34496.t1;Parent=MS.gene34496.t1
chr1.2	exon	75356674	75356891	75356674	ID=MS.gene34496.t1.exon3;Parent=MS.gene34496.t1
chr1.2	CDS	75356674	75356891	75356674	ID=cds.MS.gene34496.t1;Parent=MS.gene34496.t1

Gene Sequence

>MS.gene34496

ATGGCTCAGGTATGGATTCTCTCATTTGGGTTTCTACAGAACAATTTTTTCTTGTTACTGTTAATACTCCATCCATGTGCGCATATATTCATTTTACAAACTCTAGCTGAATTATTATTAATTAAAGTGAAAAAAAATAAGAAATAGATAAATCATTATTAATTAAAGTGACACTAACGACTATTTTAAATTGTTTTTGAGGGAATTTGGAATCTATCTCTTGAGGTTATAAGGTCAAATTCTAGCTGAACTGACGCCTCGTGTACTGTTTGGTTATAGTTAAATGAAAGATTCGATTTAGAATTTTGTTTACCACTTTTTCTATCCTCTTATGTTTGTCTCAATATGATGTCCCTCACTGGATCCATAGCAAAAGGTGGTGTTAAAGGTTCTCACTATGACAGATGACAAAACAAAGAAGAAAGCAATAGAAGCAGTTGCTGATATCTATGGTGAGAATTTATGATTTCATTTGCTCCAATTTACCAGAAAACTAAATTTCTGCCCTGGAAACACATTAATGGAATAAAATTCATCTGTGTAACTGTTGGTACTCTTATAACAGGAGTTGATTCAATCGCTACAGATGTGAACGAACAGAAGTTAACAGTTATTGGCGAAATGGATACAGTTGCAGTAGTGAAGAAGCTGAAGAAAGTAGGGAAGGTAGATATAATATCAGTTGGACCTGCCAAAGAAGAGAAAAAAGAAGAAAAGAAAGACGAAAGTAAAGACGAAAAGAAGGAAGAGAAAAAAGAGGAGAAACAAGAGGAGAAAAAATAA

Protein sequence

>MS.gene34496.t1

MAQQKVVLKVLTMTDDKTKKKAIEAVADIYGVDSIATDVNEQKLTVIGEMDTVAVVKKLKKVGKVDIISVGPAKEEKKEEKKDESKDEKKEEKKEEKQEEKK