Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97682.t1 | XP_024630289.1 | 96.2 | 422 | 16 | 0 | 3 | 424 | 86 | 507 | 4.20E-214 | 753.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97682.t1 | Q52MZ2 | 71.0 | 427 | 111 | 7 | 3 | 424 | 88 | 506 | 2.1e-161 | 570.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97682.t1 | A0A396JP80 | 96.2 | 422 | 16 | 0 | 3 | 424 | 86 | 507 | 3.1e-214 | 753.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene97682.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene97682 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene97682 | -0.827801 | 1.28E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene97682 | -0.840537 | 8.19E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene97682 | -0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene97682 | -0.83404 | 3.77E-56 | -1.69E-46 |
| MS.gene049259 | MS.gene97682 | 0.885907 | 5.42E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene97682 | -0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene97682 | -0.855034 | 8.27E-62 | -1.69E-46 |
| MS.gene049402 | MS.gene97682 | 0.838754 | 2.38E-57 | -1.69E-46 |
| MS.gene049483 | MS.gene97682 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene97682 | 0.811304 | 7.49E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene97682 | 0.848605 | 5.51E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene97682 | -0.830548 | 2.76E-55 | -1.69E-46 |
| MS.gene049634 | MS.gene97682 | 0.877342 | 6.79E-69 | -1.69E-46 |
| MS.gene050082 | MS.gene97682 | 0.837828 | 4.13E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene97682 | -0.81884 | 1.59E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene97682 | -0.841951 | 3.48E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene97682 | -0.859122 | 5.15E-63 | -1.69E-46 |
| MS.gene050173 | MS.gene97682 | 0.862939 | 3.55E-64 | -1.69E-46 |
| MS.gene050216 | MS.gene97682 | -0.834724 | 2.54E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene97682 | -0.837677 | 4.51E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene97682 | -0.853259 | 2.69E-61 | -1.69E-46 |
| MS.gene050381 | MS.gene97682 | 0.857513 | 1.55E-62 | -1.69E-46 |
| MS.gene050444 | MS.gene97682 | -0.83121 | 1.90E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene97682 | -0.824639 | 7.24E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene97682 | -0.857064 | 2.11E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene97682 | -0.826113 | 3.24E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene97682 | -0.876809 | 1.04E-68 | -1.69E-46 |
| MS.gene050647 | MS.gene97682 | 0.804883 | 1.74E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene97682 | -0.852645 | 4.03E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene97682 | -0.819908 | 9.07E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene97682 | -0.820736 | 5.86E-53 | -1.69E-46 |
| MS.gene05079 | MS.gene97682 | 0.881728 | 1.89E-70 | -1.69E-46 |
| MS.gene050809 | MS.gene97682 | 0.814768 | 1.30E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene97682 | -0.81491 | 1.21E-51 | -1.69E-46 |
| MS.gene050832 | MS.gene97682 | 0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene97682 | -0.848037 | 7.91E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene97682 | -0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene050876 | MS.gene97682 | -0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene97682 | 0.811386 | 7.19E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene97682 | -0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene97682 | -0.833516 | 5.10E-56 | -1.69E-46 |
| MS.gene051044 | MS.gene97682 | 0.853125 | 2.94E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene97682 | 0.836052 | 1.17E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene97682 | 0.879574 | 1.12E-69 | -1.69E-46 |
| MS.gene051138 | MS.gene97682 | 0.887848 | 9.94E-73 | -1.69E-46 |
| MS.gene051142 | MS.gene97682 | 0.82313 | 1.63E-53 | -1.69E-46 |
| MS.gene05114 | MS.gene97682 | 0.847099 | 1.43E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene97682 | -0.810661 | 1.03E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene97682 | -0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene97682 | -0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene97682 | 0.823669 | 1.22E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene97682 | 0.833773 | 4.40E-56 | -1.69E-46 |
| MS.gene051367 | MS.gene97682 | 0.812067 | 5.11E-51 | -1.69E-46 |
| MS.gene051422 | MS.gene97682 | 0.804206 | 2.41E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene97682 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene97682 | 0.853032 | 3.12E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene97682 | -0.839067 | 1.98E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene97682 | -0.814771 | 1.30E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene97682 | 0.858934 | 5.86E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene97682 | -0.818419 | 1.98E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene97682 | -0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene97682 | -0.812606 | 3.89E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene97682 | -0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene052805 | MS.gene97682 | 0.831715 | 1.43E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene97682 | -0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene97682 | -0.836627 | 8.37E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene97682 | -0.835669 | 1.47E-56 | -1.69E-46 |
| MS.gene053069 | MS.gene97682 | 0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene97682 | -0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene97682 | 0.891761 | 2.96E-74 | -1.69E-46 |
| MS.gene053488 | MS.gene97682 | 0.855383 | 6.54E-62 | -1.69E-46 |
| MS.gene053561 | MS.gene97682 | 0.876096 | 1.83E-68 | -1.69E-46 |
| MS.gene053824 | MS.gene97682 | -0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene053887 | MS.gene97682 | 0.824659 | 7.16E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene97682 | -0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene054054 | MS.gene97682 | 0.816881 | 4.40E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene97682 | 0.849598 | 2.92E-60 | -1.69E-46 |
| MS.gene054057 | MS.gene97682 | 0.802763 | 4.81E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene97682 | -0.803495 | 3.39E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene97682 | 0.837407 | 5.29E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene97682 | -0.83922 | 1.81E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene97682 | 0.830942 | 2.21E-55 | -1.69E-46 |
| MS.gene054707 | MS.gene97682 | 0.81225 | 4.66E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene97682 | 0.82984 | 4.11E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene97682 | -0.811492 | 6.81E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene97682 | -0.834702 | 2.57E-56 | -1.69E-46 |
| MS.gene055124 | MS.gene97682 | 0.832012 | 1.21E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene97682 | 0.863687 | 2.08E-64 | -1.69E-46 |
| MS.gene055202 | MS.gene97682 | 0.8248 | 6.63E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene97682 | -0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene97682 | -0.844901 | 5.67E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene97682 | -0.836476 | 9.15E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene97682 | -0.811084 | 8.35E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene97682 | -0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene97682 | -0.828184 | 1.03E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene97682 | -0.831003 | 2.13E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene97682 | -0.846766 | 1.77E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene97682 | -0.83862 | 2.58E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene97682 | -0.848508 | 5.86E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene97682 | -0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene97682 | 0.861376 | 1.07E-63 | -1.69E-46 |
| MS.gene055959 | MS.gene97682 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene97682 | 0.85436 | 1.30E-61 | -1.69E-46 |
| MS.gene056311 | MS.gene97682 | 0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene97682 | -0.861431 | 1.03E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene97682 | -0.816631 | 5.01E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene97682 | -0.827663 | 1.38E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene97682 | -0.846074 | 2.73E-59 | -1.69E-46 |
| MS.gene056692 | MS.gene97682 | -0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene056761 | MS.gene97682 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene97682 | 0.86271 | 4.18E-64 | -1.69E-46 |
| MS.gene056857 | MS.gene97682 | 0.839629 | 1.41E-57 | -1.69E-46 |
| MS.gene057549 | MS.gene97682 | 0.823601 | 1.27E-53 | -1.69E-46 |
| MS.gene057768 | MS.gene97682 | 0.821949 | 3.08E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene97682 | -0.802992 | 4.31E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene97682 | 0.841457 | 4.70E-58 | -1.69E-46 |
| MS.gene058093 | MS.gene97682 | 0.803731 | 3.03E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene97682 | 0.852293 | 5.08E-61 | -1.69E-46 |
| MS.gene058109 | MS.gene97682 | 0.82695 | 2.05E-54 | -1.69E-46 |
| MS.gene058111 | MS.gene97682 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene058117 | MS.gene97682 | 0.829774 | 4.26E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene97682 | 0.858757 | 6.62E-63 | -1.69E-46 |
| MS.gene058173 | MS.gene97682 | 0.848716 | 5.13E-60 | -1.69E-46 |
| MS.gene058175 | MS.gene97682 | 0.863777 | 1.95E-64 | -1.69E-46 |
| MS.gene058268 | MS.gene97682 | 0.840819 | 6.91E-58 | -1.69E-46 |
| MS.gene058269 | MS.gene97682 | 0.838606 | 2.60E-57 | -1.69E-46 |
| MS.gene058338 | MS.gene97682 | -0.80476 | 1.85E-49 | -1.69E-46 |
| MS.gene058341 | MS.gene97682 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene97682 | -0.819202 | 1.31E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene97682 | -0.831507 | 1.61E-55 | -1.69E-46 |
| MS.gene058493 | MS.gene97682 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene97682 | 0.842226 | 2.94E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene97682 | -0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene97682 | -0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene058840 | MS.gene97682 | 0.850509 | 1.62E-60 | -1.69E-46 |
| MS.gene058978 | MS.gene97682 | 0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene97682 | -0.870063 | 1.94E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene97682 | -0.818585 | 1.82E-52 | -1.69E-46 |
| MS.gene059038 | MS.gene97682 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene059045 | MS.gene97682 | 0.825392 | 4.81E-54 | -1.69E-46 |
| MS.gene059070 | MS.gene97682 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene97682 | -0.839788 | 1.29E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene97682 | -0.845686 | 3.48E-59 | -1.69E-46 |
| MS.gene059690 | MS.gene97682 | 0.821678 | 3.55E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene97682 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene059697 | MS.gene97682 | 0.812266 | 4.62E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene97682 | -0.815356 | 9.64E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene97682 | -0.87596 | 2.04E-68 | -1.69E-46 |
| MS.gene059902 | MS.gene97682 | -0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene97682 | 0.818347 | 2.06E-52 | -1.69E-46 |
| MS.gene059943 | MS.gene97682 | 0.833607 | 4.84E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene97682 | -0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene97682 | 0.833865 | 4.17E-56 | -1.69E-46 |
| MS.gene060595 | MS.gene97682 | 0.817878 | 2.62E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene97682 | -0.838032 | 3.66E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene97682 | -0.848627 | 5.43E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene97682 | -0.823868 | 1.10E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene97682 | -0.836618 | 8.42E-57 | -1.69E-46 |
| MS.gene060823 | MS.gene97682 | 0.847809 | 9.14E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene97682 | -0.837053 | 6.52E-57 | -1.69E-46 |
| MS.gene061044 | MS.gene97682 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene97682 | -0.805961 | 1.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97682.t1 | MTR_0126s0080 | 97.594 | 374 | 9 | 0 | 3 | 376 | 86 | 459 | 0.0 | 762 |
| MS.gene97682.t1 | MTR_7g092750 | 75.592 | 422 | 83 | 6 | 3 | 424 | 63 | 464 | 0.0 | 646 |
| MS.gene97682.t1 | MTR_7g092750 | 70.283 | 424 | 76 | 7 | 3 | 424 | 63 | 438 | 0.0 | 587 |
| MS.gene97682.t1 | MTR_7g092750 | 75.597 | 377 | 76 | 3 | 48 | 424 | 3 | 363 | 0.0 | 585 |
| MS.gene97682.t1 | MTR_8g040120 | 60.968 | 310 | 107 | 5 | 117 | 422 | 166 | 465 | 3.90e-131 | 386 |
| MS.gene97682.t1 | MTR_7g089800 | 59.146 | 328 | 118 | 6 | 101 | 423 | 107 | 423 | 1.51e-129 | 380 |
| MS.gene97682.t1 | MTR_7g089800 | 59.146 | 328 | 118 | 6 | 101 | 423 | 136 | 452 | 4.93e-129 | 380 |
| MS.gene97682.t1 | MTR_2g086420 | 45.140 | 463 | 176 | 8 | 5 | 423 | 41 | 469 | 9.06e-125 | 370 |
| MS.gene97682.t1 | MTR_2g086420 | 45.140 | 463 | 175 | 9 | 5 | 423 | 41 | 468 | 6.22e-123 | 366 |
| MS.gene97682.t1 | MTR_4g053250 | 45.067 | 446 | 191 | 8 | 7 | 423 | 41 | 461 | 1.13e-114 | 344 |
| MS.gene97682.t1 | MTR_5g054900 | 54.181 | 299 | 126 | 3 | 128 | 423 | 63 | 353 | 3.21e-114 | 338 |
| MS.gene97682.t1 | MTR_5g054900 | 54.181 | 299 | 126 | 3 | 128 | 423 | 144 | 434 | 4.12e-113 | 338 |
| MS.gene97682.t1 | MTR_5g054900 | 53.512 | 299 | 124 | 4 | 128 | 423 | 63 | 349 | 1.75e-110 | 329 |
| MS.gene97682.t1 | MTR_5g054900 | 53.512 | 299 | 124 | 4 | 128 | 423 | 174 | 460 | 3.18e-109 | 330 |
| MS.gene97682.t1 | MTR_3g087940 | 51.792 | 307 | 139 | 3 | 117 | 423 | 64 | 361 | 1.28e-104 | 314 |
| MS.gene97682.t1 | MTR_1g111310 | 52.365 | 296 | 137 | 3 | 128 | 423 | 416 | 707 | 5.52e-99 | 311 |
| MS.gene97682.t1 | MTR_1g111310 | 51.379 | 290 | 129 | 3 | 128 | 417 | 49 | 326 | 1.24e-89 | 286 |
| MS.gene97682.t1 | MTR_5g060950 | 47.508 | 301 | 150 | 2 | 120 | 420 | 54 | 346 | 6.01e-88 | 271 |
| MS.gene97682.t1 | MTR_8g091650 | 42.899 | 345 | 176 | 6 | 79 | 423 | 33 | 356 | 1.75e-85 | 265 |
| MS.gene97682.t1 | MTR_8g091650 | 47.569 | 288 | 142 | 4 | 136 | 423 | 5 | 283 | 5.25e-84 | 259 |
| MS.gene97682.t1 | MTR_3g073560 | 48.789 | 289 | 140 | 2 | 133 | 421 | 65 | 345 | 5.62e-84 | 269 |
| MS.gene97682.t1 | MTR_8g091650 | 47.423 | 291 | 144 | 4 | 133 | 423 | 111 | 392 | 5.52e-83 | 260 |
| MS.gene97682.t1 | MTR_3g044820 | 52.047 | 171 | 75 | 3 | 128 | 293 | 40 | 208 | 7.01e-57 | 186 |
| MS.gene97682.t1 | MTR_1g090370 | 31.373 | 204 | 113 | 5 | 218 | 416 | 47 | 228 | 2.31e-21 | 92.4 |
| MS.gene97682.t1 | MTR_1g111320 | 56.962 | 79 | 32 | 1 | 128 | 206 | 141 | 217 | 4.05e-18 | 83.2 |
| MS.gene97682.t1 | MTR_2g076140 | 24.091 | 220 | 129 | 3 | 213 | 412 | 8 | 209 | 2.20e-12 | 66.6 |
| MS.gene97682.t1 | MTR_7g068860 | 25.731 | 171 | 123 | 2 | 247 | 413 | 49 | 219 | 2.96e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97682.t1 | AT5G06839 | 63.781 | 439 | 137 | 10 | 3 | 424 | 26 | 459 | 0.0 | 543 |
| MS.gene97682.t1 | AT5G06839 | 61.149 | 435 | 112 | 8 | 3 | 424 | 26 | 416 | 0.0 | 516 |
| MS.gene97682.t1 | AT5G06839 | 61.009 | 436 | 112 | 9 | 3 | 424 | 26 | 417 | 0.0 | 511 |
| MS.gene97682.t1 | AT1G08320 | 59.688 | 320 | 106 | 5 | 104 | 423 | 33 | 329 | 2.67e-129 | 377 |
| MS.gene97682.t1 | AT1G08320 | 59.688 | 320 | 106 | 5 | 104 | 423 | 33 | 329 | 2.67e-129 | 377 |
| MS.gene97682.t1 | AT1G08320 | 48.770 | 447 | 173 | 11 | 3 | 423 | 37 | 453 | 2.37e-128 | 379 |
| MS.gene97682.t1 | AT1G08320 | 48.770 | 447 | 173 | 11 | 3 | 423 | 37 | 453 | 2.37e-128 | 379 |
| MS.gene97682.t1 | AT1G08320 | 48.770 | 447 | 173 | 11 | 3 | 423 | 37 | 453 | 2.37e-128 | 379 |
| MS.gene97682.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 114 | 423 | 29 | 330 | 4.53e-120 | 353 |
| MS.gene97682.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 114 | 423 | 29 | 330 | 4.53e-120 | 353 |
| MS.gene97682.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 114 | 423 | 29 | 330 | 4.53e-120 | 353 |
| MS.gene97682.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 114 | 423 | 29 | 330 | 4.53e-120 | 353 |
| MS.gene97682.t1 | AT5G06950 | 56.410 | 312 | 124 | 4 | 114 | 423 | 29 | 330 | 4.53e-120 | 353 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 30 | 330 | 2.49e-118 | 348 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 30 | 330 | 2.49e-118 | 348 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 30 | 330 | 2.49e-118 | 348 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 30 | 330 | 2.49e-118 | 348 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 3 | 303 | 3.75e-118 | 347 |
| MS.gene97682.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 131 | 423 | 44 | 330 | 8.69e-118 | 347 |
| MS.gene97682.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 131 | 423 | 44 | 330 | 8.69e-118 | 347 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 24 | 324 | 1.05e-117 | 346 |
| MS.gene97682.t1 | AT5G06960 | 59.797 | 296 | 107 | 4 | 131 | 423 | 24 | 310 | 1.21e-117 | 346 |
| MS.gene97682.t1 | AT3G12250 | 55.663 | 309 | 127 | 3 | 117 | 423 | 55 | 355 | 8.53e-117 | 345 |
| MS.gene97682.t1 | AT1G68640 | 55.882 | 306 | 127 | 3 | 119 | 422 | 152 | 451 | 1.76e-113 | 340 |
| MS.gene97682.t1 | AT5G10030 | 48.810 | 336 | 154 | 5 | 88 | 423 | 45 | 362 | 2.04e-103 | 311 |
| MS.gene97682.t1 | AT5G10030 | 48.810 | 336 | 154 | 5 | 88 | 423 | 45 | 362 | 2.04e-103 | 311 |
| MS.gene97682.t1 | AT5G10030 | 48.810 | 336 | 154 | 5 | 88 | 423 | 45 | 362 | 2.04e-103 | 311 |
| MS.gene97682.t1 | AT5G10030 | 48.810 | 336 | 154 | 5 | 88 | 423 | 45 | 362 | 2.04e-103 | 311 |
| MS.gene97682.t1 | AT5G10030 | 48.810 | 336 | 154 | 5 | 88 | 423 | 45 | 362 | 2.04e-103 | 311 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 43.767 | 377 | 190 | 5 | 56 | 423 | 3 | 366 | 1.02e-100 | 305 |
| MS.gene97682.t1 | AT5G65210 | 50.658 | 304 | 136 | 5 | 120 | 423 | 7 | 296 | 1.47e-99 | 299 |
| MS.gene97682.t1 | AT1G77920 | 48.640 | 331 | 140 | 4 | 106 | 423 | 53 | 366 | 3.64e-99 | 301 |
| MS.gene97682.t1 | AT1G22070 | 51.125 | 311 | 146 | 2 | 113 | 423 | 78 | 382 | 1.31e-98 | 300 |
| MS.gene97682.t1 | AT1G58330 | 27.826 | 230 | 139 | 5 | 202 | 413 | 3 | 223 | 2.73e-17 | 80.9 |
Find 90 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCAAGTGCTTATGATTT+AGG | 0.170937 | 1.1:-39679623 | MS.gene97682:CDS |
| CTAATACTATTCATAGAAAT+TGG | 0.252336 | 1.1:+39677568 | None:intergenic |
| ATTTATACCTTTGAATTAGA+TGG | 0.288466 | 1.1:+39678823 | None:intergenic |
| TGCTTATGATTTAGGTGAAT+TGG | 0.291461 | 1.1:-39679615 | MS.gene97682:CDS |
| GTACCTACCTTGACAGGTTT+TGG | 0.299604 | 1.1:+39678515 | None:intergenic |
| GAAAAGCAGGCTTAGGAAAA+AGG | 0.300402 | 1.1:-39678195 | MS.gene97682:intron |
| TTTAAGCAATCCTCCTAATA+TGG | 0.308534 | 1.1:-39675830 | MS.gene97682:CDS |
| ACCCACATATACCAAGTATT+TGG | 0.313791 | 1.1:+39675944 | None:intergenic |
| GCAATGTTTGATGTGGAGTA+TGG | 0.316893 | 1.1:-39677443 | MS.gene97682:CDS |
| AATGGGAGGAGGTGCACTTT+TGG | 0.318194 | 1.1:-39677608 | MS.gene97682:CDS |
| CTCATCACTCACACTATTCT+TGG | 0.319137 | 1.1:+39671901 | None:intergenic |
| CAGACCATCTGAACTCATTA+AGG | 0.331549 | 1.1:-39677198 | MS.gene97682:intron |
| CCCATGTAGTTAGCCATATT+AGG | 0.347360 | 1.1:+39675817 | None:intergenic |
| GTTATATGTGGAAAATTGTT+TGG | 0.359400 | 1.1:-39677339 | MS.gene97682:CDS |
| CTTTGATCTTGAACACTAGA+AGG | 0.383567 | 1.1:+39679548 | None:intergenic |
| GGCTAACTACATGGGACAAA+TGG | 0.386586 | 1.1:-39675809 | MS.gene97682:CDS |
| CACATGAAGCAACGTTCAGC+TGG | 0.396922 | 1.1:+39677233 | None:intergenic |
| GGAGTATGGGAGGTGGTTAG+AGG | 0.399529 | 1.1:-39677429 | MS.gene97682:CDS |
| CACCAAATACTTGGTATATG+TGG | 0.406944 | 1.1:-39675946 | MS.gene97682:CDS |
| AAGAGTGGAGAGCTTGTTCA+TGG | 0.411247 | 1.1:+39675780 | None:intergenic |
| TCATAGAAATTGGAATTCCT+TGG | 0.413274 | 1.1:+39677578 | None:intergenic |
| ATTTAATTAACCTTAGGATC+TGG | 0.426639 | 1.1:+39678323 | None:intergenic |
| TTCGAGCATTGAGTTCTCTC+TGG | 0.430265 | 1.1:-39671938 | MS.gene97682:CDS |
| TTTGGTGGTGCAGGTGCAGA+AGG | 0.442112 | 1.1:+39678533 | None:intergenic |
| TCGTCAAGCTGCAAGATGTT+TGG | 0.442179 | 1.1:-39671988 | MS.gene97682:CDS |
| TATAATGTACCTACCTTGAC+AGG | 0.447542 | 1.1:+39678509 | None:intergenic |
| TCCTAATATGGCTAACTACA+TGG | 0.453054 | 1.1:-39675818 | MS.gene97682:CDS |
| CTTACGGAGCACCAAATACT+TGG | 0.457443 | 1.1:-39675955 | MS.gene97682:CDS |
| GGTTGAGTGCATCAAGCCCT+TGG | 0.467685 | 1.1:+39675884 | None:intergenic |
| AGTATTTGGTGCTCCGTAAG+AGG | 0.471286 | 1.1:+39675958 | None:intergenic |
| CGTTGCTTCATGTGGATTGG+TGG | 0.475727 | 1.1:-39677224 | MS.gene97682:CDS |
| AAGTCAAATTGAGCCTCTTA+CGG | 0.480461 | 1.1:-39675971 | MS.gene97682:CDS |
| ACAGAGAATTCATCATCATC+AGG | 0.483003 | 1.1:-39678907 | MS.gene97682:intron |
| CAGCAAGGAAAAGCAGGCTT+AGG | 0.497874 | 1.1:-39678202 | MS.gene97682:CDS |
| GAGAGGCAGCAAGGAAAAGC+AGG | 0.498595 | 1.1:-39678208 | MS.gene97682:CDS |
| TATTTGGTATTAGGCTAGCA+TGG | 0.500668 | 1.1:-39678636 | MS.gene97682:intron |
| TTCATGCAAGTGTTCATCTA+CGG | 0.502953 | 1.1:+39677373 | None:intergenic |
| ACACTATTCTTGGCGAGGAC+GGG | 0.506076 | 1.1:+39671911 | None:intergenic |
| GTTGAGTGCATCAAGCCCTT+GGG | 0.513231 | 1.1:+39675885 | None:intergenic |
| ACTTGCATGAAAATGAGCTT+AGG | 0.517257 | 1.1:-39677361 | MS.gene97682:CDS |
| AAAACCATCTCAACCGTCCA+TGG | 0.517927 | 1.1:-39678582 | MS.gene97682:CDS |
| TCTATGAATAGTATTAGCTC+AGG | 0.520974 | 1.1:-39677562 | MS.gene97682:intron |
| ATCTCAACCGTCCATGGAGT+TGG | 0.523885 | 1.1:-39678576 | MS.gene97682:CDS |
| TTTACCTTAATGAGTTCAGA+TGG | 0.525808 | 1.1:+39677194 | None:intergenic |
| ACCTTTGAATTAGATGGTGG+TGG | 0.533763 | 1.1:+39678829 | None:intergenic |
| AACTCCATGGACGGTTGAGA+TGG | 0.534438 | 1.1:+39678578 | None:intergenic |
| CAGCTGAACGTTGCTTCATG+TGG | 0.535836 | 1.1:-39677232 | MS.gene97682:CDS |
| CACACTATTCTTGGCGAGGA+CGG | 0.538683 | 1.1:+39671910 | None:intergenic |
| TGGTTTGCCAACTCCATGGA+CGG | 0.539075 | 1.1:+39678569 | None:intergenic |
| ATCAACACAAGAGGCAGAAG+AGG | 0.540377 | 1.1:-39675914 | MS.gene97682:CDS |
| TCGTTGGTTTGCCAACTCCA+TGG | 0.541761 | 1.1:+39678565 | None:intergenic |
| GAACGTTGCTTCATGTGGAT+TGG | 0.542533 | 1.1:-39677227 | MS.gene97682:CDS |
| ATTTGGTATTAGGCTAGCAT+GGG | 0.543696 | 1.1:-39678635 | MS.gene97682:intron |
| GGTGGTTAGAGGAGCATCAC+AGG | 0.543826 | 1.1:-39677418 | MS.gene97682:CDS |
| GATGCAGACGATGAACTGTT+TGG | 0.543853 | 1.1:+39672024 | None:intergenic |
| ACATGAAGCAACGTTCAGCT+GGG | 0.545343 | 1.1:+39677234 | None:intergenic |
| TTATAGTCTCTGAAAGAGAC+TGG | 0.550594 | 1.1:+39675863 | None:intergenic |
| GCTACATGCATTGGTTGAGA+TGG | 0.551490 | 1.1:+39678853 | None:intergenic |
| AAATGAGCTTAGGTTATATG+TGG | 0.558714 | 1.1:-39677351 | MS.gene97682:CDS |
| TAGGGCGTGTTAATGGGAGG+AGG | 0.559293 | 1.1:-39677619 | MS.gene97682:CDS |
| ACCACCACCATCTAATTCAA+AGG | 0.566192 | 1.1:-39678830 | MS.gene97682:intron |
| ACCAAATACTTGGTATATGT+GGG | 0.567198 | 1.1:-39675945 | MS.gene97682:CDS |
| TTGGTGGTGCAGGTGCAGAA+GGG | 0.571374 | 1.1:+39678534 | None:intergenic |
| GGAGCCACTTGTTATTGGAG+AGG | 0.576956 | 1.1:+39678607 | None:intergenic |
| GGTGGTGGTGCTACATGCAT+TGG | 0.577778 | 1.1:+39678844 | None:intergenic |
| GCAGAAGAGGCACTTTCCCA+AGG | 0.580930 | 1.1:-39675901 | MS.gene97682:CDS |
| GGGAAAATGTTAAGAGTTGG+TGG | 0.582239 | 1.1:+39678874 | None:intergenic |
| CAATGTTTGATGTGGAGTAT+GGG | 0.584437 | 1.1:-39677442 | MS.gene97682:CDS |
| AGAGGCTGCAATGTTTGATG+TGG | 0.585256 | 1.1:-39677450 | MS.gene97682:CDS |
| ATGTAGTTAGCCATATTAGG+AGG | 0.586012 | 1.1:+39675820 | None:intergenic |
| TATACCTTTGAATTAGATGG+TGG | 0.586657 | 1.1:+39678826 | None:intergenic |
| CTCAGAATAGAGAGGCAGCA+AGG | 0.595969 | 1.1:-39678217 | MS.gene97682:CDS |
| CCTAATATGGCTAACTACAT+GGG | 0.597846 | 1.1:-39675817 | MS.gene97682:CDS |
| CAGAAGAGGCACTTTCCCAA+GGG | 0.599073 | 1.1:-39675900 | MS.gene97682:CDS |
| CTACATGCATTGGTTGAGAT+GGG | 0.602831 | 1.1:+39678854 | None:intergenic |
| GATGGGAAAATGTTAAGAGT+TGG | 0.603515 | 1.1:+39678871 | None:intergenic |
| TCTCACAAAACTTTCAAGAG+TGG | 0.609018 | 1.1:+39675765 | None:intergenic |
| TGCACCACCAAAACCTGTCA+AGG | 0.616194 | 1.1:-39678522 | MS.gene97682:intron |
| TTCAGCAGCTAGAAACAAGT+AGG | 0.617268 | 1.1:-39678041 | MS.gene97682:CDS |
| CATGAAGCAACGTTCAGCTG+GGG | 0.618932 | 1.1:+39677235 | None:intergenic |
| CACTCACACTATTCTTGGCG+AGG | 0.619291 | 1.1:+39671906 | None:intergenic |
| TTGATGTGGAGTATGGGAGG+TGG | 0.624452 | 1.1:-39677436 | MS.gene97682:CDS |
| GCAGAAAGAGAATAATCGCA+AGG | 0.635102 | 1.1:-39678384 | MS.gene97682:intron |
| CACTGCAGGCAGATAATCTG+AGG | 0.637739 | 1.1:-39672049 | MS.gene97682:intron |
| ACTTCAAGTTCTGAACATGA+AGG | 0.639217 | 1.1:-39678356 | MS.gene97682:CDS |
| TTAACCTCTCCAATAACAAG+TGG | 0.650451 | 1.1:-39678611 | MS.gene97682:CDS |
| TGTTTGATGTGGAGTATGGG+AGG | 0.654392 | 1.1:-39677439 | MS.gene97682:CDS |
| AAGACTTGCTCAGAATAGAG+AGG | 0.666657 | 1.1:-39678225 | MS.gene97682:CDS |
| GTTGCAACAATCAACACAAG+AGG | 0.670460 | 1.1:-39675923 | MS.gene97682:CDS |
| AAAATGTTAAGAGTTGGTGG+TGG | 0.691086 | 1.1:+39678877 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 39671914 | 39683406 | 39671914 | ID=MS.gene97682 |
| chr1.1 | mRNA | 39671914 | 39683406 | 39671914 | ID=MS.gene97682.t1;Parent=MS.gene97682 |
| chr1.1 | exon | 39683402 | 39683406 | 39683402 | ID=MS.gene97682.t1.exon1;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39683402 | 39683406 | 39683402 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39679546 | 39679652 | 39679546 | ID=MS.gene97682.t1.exon2;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39679546 | 39679652 | 39679546 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39678831 | 39678925 | 39678831 | ID=MS.gene97682.t1.exon3;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39678831 | 39678925 | 39678831 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39678523 | 39678645 | 39678523 | ID=MS.gene97682.t1.exon4;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39678523 | 39678645 | 39678523 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39678334 | 39678402 | 39678334 | ID=MS.gene97682.t1.exon5;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39678334 | 39678402 | 39678334 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39678196 | 39678255 | 39678196 | ID=MS.gene97682.t1.exon6;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39678196 | 39678255 | 39678196 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39677993 | 39678070 | 39677993 | ID=MS.gene97682.t1.exon7;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39677993 | 39678070 | 39677993 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39677563 | 39677638 | 39677563 | ID=MS.gene97682.t1.exon8;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39677563 | 39677638 | 39677563 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39677199 | 39677470 | 39677199 | ID=MS.gene97682.t1.exon9;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39677199 | 39677470 | 39677199 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39675762 | 39676001 | 39675762 | ID=MS.gene97682.t1.exon10;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39675762 | 39676001 | 39675762 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| chr1.1 | exon | 39671914 | 39672063 | 39671914 | ID=MS.gene97682.t1.exon11;Parent=MS.gene97682.t1 |
| chr1.1 | CDS | 39671914 | 39672063 | 39671914 | ID=cds.MS.gene97682.t1;Parent=MS.gene97682.t1 |
| Gene Sequence |
| Protein sequence |
