AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020498.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020498.01.T01 MTR_4g052500 70.175 114 0 1 25 104 188 301 4.96e-43 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020498.01.T01 AT5G22340 56.154 130 23 1 25 120 194 323 1.99e-41 139
MsG0480020498.01.T01 AT5G22340 46.226 106 23 1 25 96 194 299 5.85e-22 89.0

Find 69 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTGTACACTTATTTA+AGG 0.190500 4:+42497934 MsG0480020498.01.T01:three_prime_UTR
GTGATCCCGGCAGCAATTTA+TGG 0.193346 4:+42497240 MsG0480020498.01.T01:CDS
CTCAGCCTTCAAAATTCTTC+TGG 0.224073 4:-42497758 None:intergenic
CAGCTTGTGCCAGCCATGTT+TGG 0.234831 4:+42497665 MsG0480020498.01.T01:intron
AGGAGAAAATGAAGGGGTTT+TGG 0.293414 4:-42493241 None:intergenic
GGCAGCAATTTATGGACTTT+GGG 0.326123 4:+42497248 MsG0480020498.01.T01:CDS
CGGCAGCAATTTATGGACTT+TGG 0.331522 4:+42497247 MsG0480020498.01.T01:CDS
CGAATGGATATCAGAAATTC+TGG 0.336852 4:+42495089 MsG0480020498.01.T01:exon
CAAGAACTTGTGATTTACTA+TGG 0.342168 4:+42495066 MsG0480020498.01.T01:five_prime_UTR
AGAGGTAACTGAATAAAATA+TGG 0.351839 4:+42498016 MsG0480020498.01.T01:three_prime_UTR
AGCTTGTGCCAGCCATGTTT+GGG 0.359430 4:+42497666 MsG0480020498.01.T01:intron
CATCCAATGTATATTATTAG+AGG 0.371654 4:+42497998 MsG0480020498.01.T01:three_prime_UTR
CTGCTATAAGTTATGCGATT+GGG 0.398513 4:+42496216 MsG0480020498.01.T01:CDS
ATCTCCAAGGCTTGTGATCC+CGG 0.413235 4:+42497227 MsG0480020498.01.T01:CDS
GAATTGAAAGGTGTAAGAAT+TGG 0.434883 4:-42493217 None:intergenic
TTAGCCAAGGGAGTAGGGTG+AGG 0.440460 4:+42493129 MsG0480020498.01.T01:five_prime_UTR
ATTCTTTCGAGAAAACAATC+AGG 0.440956 4:+42497184 MsG0480020498.01.T01:CDS
TATAGAGACAATAAAGACTT+AGG 0.447368 4:+42497725 MsG0480020498.01.T01:CDS
ATGCAATAACAAACCTGAAA+AGG 0.451361 4:-42496241 None:intergenic
ATGTAAGTAGTGCTTAGTTC+CGG 0.451394 4:-42497865 None:intergenic
TTCCAACATTTGAGGATGTA+GGG 0.453530 4:-42497828 None:intergenic
CTATCTATGCTGTGCTGCCA+TGG 0.463376 4:+42493176 MsG0480020498.01.T01:five_prime_UTR
TTGAAGGATAGAGAATTAAA+CGG 0.472253 4:+42495032 MsG0480020498.01.T01:five_prime_UTR
AAAGTAAACAGAAATGATAA+AGG 0.485685 4:+42493105 None:intergenic
TTTCCAACATTTGAGGATGT+AGG 0.486280 4:-42497829 None:intergenic
GGCAGCACAGCATAGATAGA+TGG 0.486520 4:-42493172 None:intergenic
TTCCCTACATCCTCAAATGT+TGG 0.500345 4:+42497826 MsG0480020498.01.T01:three_prime_UTR
CAAAGTCCATAAATTGCTGC+CGG 0.506806 4:-42497246 None:intergenic
AAAGGATTAGCCAAGGGAGT+AGG 0.515548 4:+42493123 MsG0480020498.01.T01:five_prime_UTR
AAGTTTGTAGATATTCTACT+TGG 0.515979 4:+42497910 MsG0480020498.01.T01:three_prime_UTR
CTGGTCATTTCCAACATTTG+AGG 0.516416 4:-42497836 None:intergenic
TGGAAATGACCAGCTGCATC+CGG 0.517662 4:+42497846 MsG0480020498.01.T01:three_prime_UTR
CATAGATAGATGGATAGAAC+GGG 0.520971 4:-42493162 None:intergenic
CAATGCTCAACAAATAGAAC+AGG 0.524035 4:+42495145 MsG0480020498.01.T01:CDS
TGCTTAGTTCCGGATGCAGC+TGG 0.525733 4:-42497855 None:intergenic
TGAAAGTGATGATGAAACAG+AGG 0.528304 4:-42493288 None:intergenic
AAGGATTAGCCAAGGGAGTA+GGG 0.538522 4:+42493124 MsG0480020498.01.T01:five_prime_UTR
TTGTGATTTACTATGGCGAA+TGG 0.544426 4:+42495073 MsG0480020498.01.T01:exon
TAGCCAAGGGAGTAGGGTGA+GGG 0.547595 4:+42493130 MsG0480020498.01.T01:five_prime_UTR
GACAAATCTAATGCTATCCA+TGG 0.549721 4:-42493193 None:intergenic
AGCAGAAGGAACTACGAGAA+GGG 0.550417 4:-42493326 None:intergenic
GCTGCCGGGATCACAAGCCT+TGG 0.555710 4:-42497231 None:intergenic
ACAAACATCCCAAACATGGC+TGG 0.556898 4:-42497674 None:intergenic
TGCTATAAGTTATGCGATTG+GGG 0.558016 4:+42496217 MsG0480020498.01.T01:CDS
GTATAGCACTTTCATCTCCA+AGG 0.559840 4:+42497214 MsG0480020498.01.T01:CDS
GCATAGATAGATGGATAGAA+CGG 0.563419 4:-42493163 None:intergenic
TTCTTTCGAGAAAACAATCA+GGG 0.581970 4:+42497185 MsG0480020498.01.T01:CDS
AAATGATAAAGGATTAGCCA+AGG 0.582801 4:+42493116 MsG0480020498.01.T01:five_prime_UTR
AAAGTCCATAAATTGCTGCC+GGG 0.582914 4:-42497245 None:intergenic
GCGGATGCTTTCATAGGGGA+GGG 0.583144 4:-42498043 None:intergenic
CGGATGCTTTCATAGGGGAG+GGG 0.583285 4:-42498042 None:intergenic
GCTGCTATAAGTTATGCGAT+TGG 0.586026 4:+42496215 MsG0480020498.01.T01:CDS
TTACCTCTAATAATATACAT+TGG 0.588813 4:-42498001 None:intergenic
GTTGGGAAAGGAGAAAATGA+AGG 0.596622 4:-42493249 None:intergenic
GAGAAAACAATCAGGGGTAG+CGG 0.601554 4:+42497192 MsG0480020498.01.T01:CDS
AGCCAAGGGAGTAGGGTGAG+GGG 0.602391 4:+42493131 MsG0480020498.01.T01:five_prime_UTR
GCCAAGGGAGTAGGGTGAGG+GGG 0.603603 4:+42493132 MsG0480020498.01.T01:five_prime_UTR
GCAGAAGGAACTACGAGAAG+GGG 0.609331 4:-42493325 None:intergenic
TTGGGAAAGGAGAAAATGAA+GGG 0.630954 4:-42493248 None:intergenic
GTAGACAAACATCCCAAACA+TGG 0.634660 4:-42497678 None:intergenic
AATGATAAAGGATTAGCCAA+GGG 0.644790 4:+42493117 MsG0480020498.01.T01:five_prime_UTR
CAGAAGGAACTACGAGAAGG+GGG 0.653595 4:-42493324 None:intergenic
GCAAGTAAGTGATGTAGATG+AGG 0.655800 4:+42494992 MsG0480020498.01.T01:intron
GAAAGTGATGATGAAACAGA+GGG 0.658054 4:-42493287 None:intergenic
CTTAAATAAGTGTACAACAA+CGG 0.677508 4:-42497933 None:intergenic
ATAGTGTGATCTGCTGAACA+TGG 0.678015 4:-42497802 None:intergenic
TCTTTCGAGAAAACAATCAG+GGG 0.694510 4:+42497186 MsG0480020498.01.T01:CDS
TGGGAAAGGAGAAAATGAAG+GGG 0.695621 4:-42493247 None:intergenic
AAAGTGATGATGAAACAGAG+GGG 0.797882 4:-42493286 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGATTAAAGTTAAATA+GGG + Chr4:42496790-42496809 MsG0480020498.01.T01:intron 10.0%
!! CATATACTTAAAAAATAATA+AGG - Chr4:42493676-42493695 None:intergenic 10.0%
!! TATACTTAAAAAATAATAAG+GGG - Chr4:42493674-42493693 None:intergenic 10.0%
!!! AAATATACAACTTATTTTAA+TGG - Chr4:42494139-42494158 None:intergenic 10.0%
!!! ATATTTTGTAAATTCATATT+GGG + Chr4:42494153-42494172 MsG0480020498.01.T01:intron 10.0%
!!! TATATTTTGTAAATTCATAT+TGG + Chr4:42494152-42494171 MsG0480020498.01.T01:intron 10.0%
!!! TATTTTTAGTTTAATATCAA+TGG + Chr4:42494720-42494739 MsG0480020498.01.T01:intron 10.0%
!! AACTAAAAATAAAATATTGG+CGG - Chr4:42494711-42494730 None:intergenic 15.0%
!! ATAATACCAAACTTAAAATA+TGG - Chr4:42497450-42497469 None:intergenic 15.0%
!! ATACTTAAAAAATAATAAGG+GGG - Chr4:42493673-42493692 None:intergenic 15.0%
!! ATATGATTAAAGTTAAATAG+GGG + Chr4:42496791-42496810 MsG0480020498.01.T01:intron 15.0%
!! GAATATGATTAAAGTTAAAT+AGG + Chr4:42496789-42496808 MsG0480020498.01.T01:intron 15.0%
!! TGATATATGATAAAACATTA+TGG - Chr4:42493513-42493532 None:intergenic 15.0%
!! TTAAAAATAAATAAATCAGC+AGG - Chr4:42495790-42495809 None:intergenic 15.0%
!! TTAATATTAAAAGCTAATCA+GGG + Chr4:42494198-42494217 MsG0480020498.01.T01:intron 15.0%
!!! TAAGTATATGTTTTGATTTT+TGG + Chr4:42493686-42493705 MsG0480020498.01.T01:intron 15.0%
!!! TATGGTTTTTGTTTTTTATT+TGG + Chr4:42495423-42495442 MsG0480020498.01.T01:intron 15.0%
!!! TATTTTGTAAATTCATATTG+GGG + Chr4:42494154-42494173 MsG0480020498.01.T01:intron 15.0%
!!! TGATTAGCTTTTAATATTAA+GGG - Chr4:42494198-42494217 None:intergenic 15.0%
!!! TTTTGTTTTTTATTTGGATT+TGG + Chr4:42495429-42495448 MsG0480020498.01.T01:intron 15.0%
!!! TTTTTCTATTTTTCATAGTA+AGG + Chr4:42494858-42494877 MsG0480020498.01.T01:intron 15.0%
!! AAATATTTCATAACCAGAAT+TGG + Chr4:42497138-42497157 MsG0480020498.01.T01:intron 20.0%
!! ACTAAAAATAAAATATTGGC+GGG - Chr4:42494710-42494729 None:intergenic 20.0%
!! ATAAGATGAAAGAGATAATT+TGG - Chr4:42496091-42496110 None:intergenic 20.0%
!! ATGATAAGATTAACTTTAGA+TGG + Chr4:42496008-42496027 MsG0480020498.01.T01:intron 20.0%
!! ATTCTTACAATGTTGTTAAA+TGG + Chr4:42494225-42494244 MsG0480020498.01.T01:intron 20.0%
!! ATTTCATAGAAAGAAAAAGA+AGG - Chr4:42494435-42494454 None:intergenic 20.0%
!! CTTAATATTAAAAGCTAATC+AGG + Chr4:42494197-42494216 MsG0480020498.01.T01:intron 20.0%
!! GCTTCATATTATAACTTTAA+TGG + Chr4:42494834-42494853 MsG0480020498.01.T01:intron 20.0%
!! TATGATTAAAGTTAAATAGG+GGG + Chr4:42496792-42496811 MsG0480020498.01.T01:intron 20.0%
!! TTACCTCTAATAATATACAT+TGG - Chr4:42498004-42498023 None:intergenic 20.0%
!!! AAATTCAAAGTGAAAGTTTT+CGG - Chr4:42497054-42497073 None:intergenic 20.0%
!!! ACTACTTTCTTTTTTATTCT+AGG + Chr4:42494408-42494427 MsG0480020498.01.T01:intron 20.0%
!!! AGCTCTTAATTTTAATTAAG+AGG + Chr4:42494789-42494808 MsG0480020498.01.T01:intron 20.0%
!!! CTACTTTCTTTTTTATTCTA+GGG + Chr4:42494409-42494428 MsG0480020498.01.T01:intron 20.0%
!!! CTGATTAGCTTTTAATATTA+AGG - Chr4:42494199-42494218 None:intergenic 20.0%
!!! TACGTTTTGAACATATTATT+CGG - Chr4:42496647-42496666 None:intergenic 20.0%
!!! TCTACAAACTTACATTTTTT+TGG - Chr4:42497901-42497920 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - Chr4:42493886-42493905 None:intergenic 20.0%
!!! TGGAAAATTTTATACTTTTG+AGG - Chr4:42496311-42496330 None:intergenic 20.0%
!!! TTCTTTTTCATGAATATTTG+AGG - Chr4:42497016-42497035 None:intergenic 20.0%
!!! TTTTTGATATATTCAACTCA+AGG + Chr4:42493989-42494008 MsG0480020498.01.T01:intron 20.0%
! AAAAAGAAGTCAAAGAAGTA+CGG + Chr4:42497028-42497047 MsG0480020498.01.T01:intron 25.0%
! AAAAGAAAGTAGTGATTAGA+AGG - Chr4:42494401-42494420 None:intergenic 25.0%
! AAACCATTATGATAAGACAT+AGG - Chr4:42496043-42496062 None:intergenic 25.0%
! AAGTTTGTAGATATTCTACT+TGG + Chr4:42497910-42497929 MsG0480020498.01.T01:three_prime_UTR 25.0%
! ACAAACAGCTTATGTTAAAA+AGG + Chr4:42494747-42494766 MsG0480020498.01.T01:intron 25.0%
! AGAGGTAACTGAATAAAATA+TGG + Chr4:42498016-42498035 MsG0480020498.01.T01:three_prime_UTR 25.0%
! CATCCAATGTATATTATTAG+AGG + Chr4:42497998-42498017 MsG0480020498.01.T01:three_prime_UTR 25.0%
! CTACAGTATGAAATATAAGA+AGG - Chr4:42494076-42494095 None:intergenic 25.0%
! CTTAAATAAGTGTACAACAA+CGG - Chr4:42497936-42497955 None:intergenic 25.0%
! TATAGAGACAATAAAGACTT+AGG + Chr4:42497725-42497744 MsG0480020498.01.T01:CDS 25.0%
! TATTTACTTACCAAGAAAGA+AGG - Chr4:42495554-42495573 None:intergenic 25.0%
! TCTAGTTAAATTCAAGAAGA+TGG - Chr4:42496278-42496297 None:intergenic 25.0%
! TTGAAGGATAGAGAATTAAA+CGG + Chr4:42495032-42495051 MsG0480020498.01.T01:five_prime_UTR 25.0%
! TTTCATGAATATTTGAGGAA+CGG - Chr4:42497011-42497030 None:intergenic 25.0%
! TTTCCTATGTCTTATCATAA+TGG + Chr4:42496037-42496056 MsG0480020498.01.T01:intron 25.0%
!! AATTTCCAGAAGAATTTTGA+AGG + Chr4:42497753-42497772 MsG0480020498.01.T01:CDS 25.0%
!!! AACGATCCATATTTTAAGTT+TGG + Chr4:42497441-42497460 MsG0480020498.01.T01:intron 25.0%
!!! AACTTACATTTTTTTGGTAC+AGG - Chr4:42497895-42497914 None:intergenic 25.0%
!!! GTATTTTATCAATGACTTGT+TGG + Chr4:42497284-42497303 MsG0480020498.01.T01:CDS 25.0%
AAATAACTGTTGTCAAGAAC+AGG + Chr4:42494019-42494038 MsG0480020498.01.T01:intron 30.0%
AACTTATCTGATGTGATGTT+TGG - Chr4:42496331-42496350 None:intergenic 30.0%
ATACAGATACAACACAAACA+CGG + Chr4:42493827-42493846 MsG0480020498.01.T01:intron 30.0%
ATGAAGCAAATGTTAATGCA+AGG - Chr4:42494911-42494930 None:intergenic 30.0%
ATGCAATAACAAACCTGAAA+AGG - Chr4:42496244-42496263 None:intergenic 30.0%
ATTATCGCTTAACGAAAAGT+TGG + Chr4:42495478-42495497 MsG0480020498.01.T01:intron 30.0%
ATTATTCGGTACATTGTGAA+TGG - Chr4:42496633-42496652 None:intergenic 30.0%
ATTCTTTCGAGAAAACAATC+AGG + Chr4:42497184-42497203 MsG0480020498.01.T01:CDS 30.0%
CAAGAACTTGTGATTTACTA+TGG + Chr4:42495066-42495085 MsG0480020498.01.T01:five_prime_UTR 30.0%
CAGTATGAAATATAAGAAGG+AGG - Chr4:42494073-42494092 None:intergenic 30.0%
CGTTGTTGTACACTTATTTA+AGG + Chr4:42497934-42497953 MsG0480020498.01.T01:three_prime_UTR 30.0%
CTTAAAAAATAATAAGGGGG+AGG - Chr4:42493670-42493689 None:intergenic 30.0%
GTTATTTGATCGGGAATTTA+TGG + Chr4:42494047-42494066 MsG0480020498.01.T01:intron 30.0%
TAATCATATTCATAGTCACC+TGG - Chr4:42496780-42496799 None:intergenic 30.0%
TATTAAGTCTTCTGTTTCAC+CGG - Chr4:42496569-42496588 None:intergenic 30.0%
TATTCATCAGTTGTAGAGTT+TGG + Chr4:42494970-42494989 MsG0480020498.01.T01:intron 30.0%
TCAGAATACACTATTCAGTT+CGG + Chr4:42493349-42493368 MsG0480020498.01.T01:intron 30.0%
TCAGTGTAGTTTATATGTGT+CGG + Chr4:42493913-42493932 MsG0480020498.01.T01:intron 30.0%
TTATAATATGAAGCCTACAG+AGG - Chr4:42494828-42494847 None:intergenic 30.0%
TTCTTTCGAGAAAACAATCA+GGG + Chr4:42497185-42497204 MsG0480020498.01.T01:CDS 30.0%
TTTCTTGATGAATACCTTGT+TGG + Chr4:42493792-42493811 MsG0480020498.01.T01:intron 30.0%
! AACTTTTCGTTAAGCGATAA+TGG - Chr4:42495479-42495498 None:intergenic 30.0%
! AGCTTTTAATATTAAGGGCT+AGG - Chr4:42494193-42494212 None:intergenic 30.0%
! GAATTGAAAGGTGTAAGAAT+TGG - Chr4:42493220-42493239 None:intergenic 30.0%
! GCTTTTAATATTAAGGGCTA+GGG - Chr4:42494192-42494211 None:intergenic 30.0%
! TCAATCTTCGTTGCTTATTT+TGG + Chr4:42496902-42496921 MsG0480020498.01.T01:intron 30.0%
! TGTCTTGCAAACATTTTTGA+AGG + Chr4:42495016-42495035 MsG0480020498.01.T01:five_prime_UTR 30.0%
! TTCATGCCTACAAATTTGTT+GGG + Chr4:42494926-42494945 MsG0480020498.01.T01:intron 30.0%
!! AAATGATAAAGGATTAGCCA+AGG + Chr4:42493116-42493135 MsG0480020498.01.T01:five_prime_UTR 30.0%
!! AATGATAAAGGATTAGCCAA+GGG + Chr4:42493117-42493136 MsG0480020498.01.T01:five_prime_UTR 30.0%
!! AGAGCATTATATTTTCTCTG+TGG + Chr4:42493418-42493437 MsG0480020498.01.T01:intron 30.0%
!! ATGTGCATATTTTTGTTGAG+TGG - Chr4:42496131-42496150 None:intergenic 30.0%
!!! CTTGATAGTTTTTTCTGTAC+AGG + Chr4:42495876-42495895 MsG0480020498.01.T01:intron 30.0%
ACACATGTTTGATGTTTCCA+AGG - Chr4:42497323-42497342 None:intergenic 35.0%
ACCAAAACAAGAGATAAGAG+GGG - Chr4:42497114-42497133 None:intergenic 35.0%
ACTCTACAACTGATGAATAG+TGG - Chr4:42494969-42494988 None:intergenic 35.0%
AGAATTACTACTTCTCTCTG+TGG + Chr4:42495825-42495844 MsG0480020498.01.T01:intron 35.0%
AGTTTAGATAACCAGAGCAT+TGG + Chr4:42493739-42493758 MsG0480020498.01.T01:intron 35.0%
ATCATAGAGACTAACAGTGA+TGG + Chr4:42495318-42495337 MsG0480020498.01.T01:intron 35.0%
ATGTAAGTAGTGCTTAGTTC+CGG - Chr4:42497868-42497887 None:intergenic 35.0%
ATGTTGTTAAATGGCAGTCA+TGG + Chr4:42494234-42494253 MsG0480020498.01.T01:intron 35.0%
CAAAAACCTCACTTTCTTGA+GGG + Chr4:42497345-42497364 MsG0480020498.01.T01:intron 35.0%
CAATGCTCAACAAATAGAAC+AGG + Chr4:42495145-42495164 MsG0480020498.01.T01:CDS 35.0%
CATAGATAGATGGATAGAAC+GGG - Chr4:42493165-42493184 None:intergenic 35.0%
CATGACTTTCTTTCGCTTAA+CGG + Chr4:42494475-42494494 MsG0480020498.01.T01:intron 35.0%
CATGTCTTATCCAGTAAGTT+GGG + Chr4:42493468-42493487 MsG0480020498.01.T01:intron 35.0%
CGAATGGATATCAGAAATTC+TGG + Chr4:42495089-42495108 MsG0480020498.01.T01:exon 35.0%
CTGCTATAAGTTATGCGATT+GGG + Chr4:42496216-42496235 MsG0480020498.01.T01:CDS 35.0%
CTTAACGAAAAGTTGGAAAC+TGG + Chr4:42495485-42495504 MsG0480020498.01.T01:intron 35.0%
CTTCATGCCTACAAATTTGT+TGG + Chr4:42494925-42494944 MsG0480020498.01.T01:intron 35.0%
GAATTACTACTTCTCTCTGT+GGG + Chr4:42495826-42495845 MsG0480020498.01.T01:intron 35.0%
GACAAATCTAATGCTATCCA+TGG - Chr4:42493196-42493215 None:intergenic 35.0%
GACCAAAACAAGAGATAAGA+GGG - Chr4:42497115-42497134 None:intergenic 35.0%
GCATAGATAGATGGATAGAA+CGG - Chr4:42493166-42493185 None:intergenic 35.0%
GTTGGTCGTTGGATAAAAAT+TGG - Chr4:42497517-42497536 None:intergenic 35.0%
TAACTTATAGCAGCCTGAAA+AGG - Chr4:42496209-42496228 None:intergenic 35.0%
TACGCAACTCTTGAAGAATT+GGG - Chr4:42496714-42496733 None:intergenic 35.0%
TAGTTTATATGTGTCGGACA+CGG + Chr4:42493919-42493938 MsG0480020498.01.T01:intron 35.0%
TCAAAAACCTCACTTTCTTG+AGG + Chr4:42497344-42497363 MsG0480020498.01.T01:intron 35.0%
TCAACTATCGTTTAACACGT+TGG + Chr4:42497614-42497633 MsG0480020498.01.T01:intron 35.0%
TCTTTCGAGAAAACAATCAG+GGG + Chr4:42497186-42497205 MsG0480020498.01.T01:CDS 35.0%
TGACCAAAACAAGAGATAAG+AGG - Chr4:42497116-42497135 None:intergenic 35.0%
TGCGAATTGTTACACGAATT+TGG - Chr4:42496534-42496553 None:intergenic 35.0%
TGCTATAAGTTATGCGATTG+GGG + Chr4:42496217-42496236 MsG0480020498.01.T01:CDS 35.0%
TGTATGTCGAACCAAAAACA+CGG - Chr4:42497962-42497981 None:intergenic 35.0%
TGTGTATGGTTTCTTTGATC+AGG + Chr4:42495259-42495278 MsG0480020498.01.T01:intron 35.0%
TTCCAACATTTGAGGATGTA+GGG - Chr4:42497831-42497850 None:intergenic 35.0%
TTCGCTTCTTATACCAATTC+TGG - Chr4:42497154-42497173 None:intergenic 35.0%
TTCTTTCTAATCCAATGCTC+TGG - Chr4:42493753-42493772 None:intergenic 35.0%
TTGGGAAAGGAGAAAATGAA+GGG - Chr4:42493251-42493270 None:intergenic 35.0%
TTGTGATTTACTATGGCGAA+TGG + Chr4:42495073-42495092 MsG0480020498.01.T01:exon 35.0%
TTTCCAACATTTGAGGATGT+AGG - Chr4:42497832-42497851 None:intergenic 35.0%
! AAAGTGATGATGAAACAGAG+GGG - Chr4:42493289-42493308 None:intergenic 35.0%
! ACAGGCTTCTGTTATTTGAT+CGG + Chr4:42494037-42494056 MsG0480020498.01.T01:intron 35.0%
! AGTAAAGCGCTTTCAAGAAA+GGG - Chr4:42497592-42497611 None:intergenic 35.0%
! ATTTGGAACTTACACCATGA+TGG - Chr4:42496074-42496093 None:intergenic 35.0%
! GAAAGTGATGATGAAACAGA+GGG - Chr4:42493290-42493309 None:intergenic 35.0%
! GCTTAACGGCTTAATCTTTT+GGG + Chr4:42494489-42494508 MsG0480020498.01.T01:intron 35.0%
! TAGTAAAGCGCTTTCAAGAA+AGG - Chr4:42497593-42497612 None:intergenic 35.0%
! TGAAAGTGATGATGAAACAG+AGG - Chr4:42493291-42493310 None:intergenic 35.0%
! TGGTTTAACTTTCACCATCA+TGG + Chr4:42496057-42496076 MsG0480020498.01.T01:intron 35.0%
! TTCAAGTTTGCCTTCTTTCT+TGG + Chr4:42495541-42495560 MsG0480020498.01.T01:intron 35.0%
!! ATAGTGTATTCTGAAGCAGA+AGG - Chr4:42493343-42493362 None:intergenic 35.0%
!! ATGCAAAAAGCCTTGCTTTT+GGG - Chr4:42494598-42494617 None:intergenic 35.0%
!!! CAATGACTTGTTGGATTTTC+AGG + Chr4:42497293-42497312 MsG0480020498.01.T01:CDS 35.0%
!!! TATTTAAGGCACCGTGTTTT+TGG + Chr4:42497948-42497967 MsG0480020498.01.T01:three_prime_UTR 35.0%
!!! TTGGATTTTCAGGTAAACCT+TGG + Chr4:42497303-42497322 MsG0480020498.01.T01:intron 35.0%
AAACAGGAAGATGACTGCAA+AGG + Chr4:42495400-42495419 MsG0480020498.01.T01:intron 40.0%
AAAGTCCATAAATTGCTGCC+GGG - Chr4:42497248-42497267 None:intergenic 40.0%
ACAATTCTGCACCAGTAAAC+AGG + Chr4:42495384-42495403 MsG0480020498.01.T01:intron 40.0%
ACATAGTCGGTACGCTATTT+GGG - Chr4:42496677-42496696 None:intergenic 40.0%
ACTTGATGCAACAGCTACTA+AGG - Chr4:42497418-42497437 None:intergenic 40.0%
AGAACATACTGAGTCAAGAG+AGG - Chr4:42495692-42495711 None:intergenic 40.0%
AGCATGATCACCTGAAATAG+TGG + Chr4:42493583-42493602 MsG0480020498.01.T01:intron 40.0%
AGTACCCAAGAGTGGTTATT+AGG + Chr4:42495359-42495378 MsG0480020498.01.T01:intron 40.0%
AGTCAGTAACACTTACCTCA+AGG + Chr4:42495722-42495741 MsG0480020498.01.T01:intron 40.0%
ATAGAGACTAACAGTGATGG+CGG + Chr4:42495321-42495340 MsG0480020498.01.T01:intron 40.0%
ATAGTGTGATCTGCTGAACA+TGG - Chr4:42497805-42497824 None:intergenic 40.0%
ATCCCTTCACAAATTGGCTA+TGG - Chr4:42494303-42494322 None:intergenic 40.0%
ATCTGTCCATTAATGCAGTC+AGG + Chr4:42497391-42497410 MsG0480020498.01.T01:intron 40.0%
ATTCGCAGAAAACAGAGTAC+CGG + Chr4:42496547-42496566 MsG0480020498.01.T01:intron 40.0%
CAAAGTCCATAAATTGCTGC+CGG - Chr4:42497249-42497268 None:intergenic 40.0%
CCAACTTACTGGATAAGACA+TGG - Chr4:42493470-42493489 None:intergenic 40.0%
CCATGTCTTATCCAGTAAGT+TGG + Chr4:42493467-42493486 MsG0480020498.01.T01:intron 40.0%
CTAAATCCCTCAAGAAAGTG+AGG - Chr4:42497354-42497373 None:intergenic 40.0%
CTCAGCCTTCAAAATTCTTC+TGG - Chr4:42497761-42497780 None:intergenic 40.0%
CTGGTCATTTCCAACATTTG+AGG - Chr4:42497839-42497858 None:intergenic 40.0%
CTTGAAGAATTGGGTTCGAA+GGG - Chr4:42496705-42496724 None:intergenic 40.0%
GAAATGACAATTGCTCTCTG+TGG + Chr4:42496852-42496871 MsG0480020498.01.T01:intron 40.0%
GCAAGTAAGTGATGTAGATG+AGG + Chr4:42494992-42495011 MsG0480020498.01.T01:intron 40.0%
GCTGCTATAAGTTATGCGAT+TGG + Chr4:42496215-42496234 MsG0480020498.01.T01:CDS 40.0%
GCTTATGTTAAAAAGGCCTC+TGG + Chr4:42494754-42494773 MsG0480020498.01.T01:intron 40.0%
GGCAGCAATTTATGGACTTT+GGG + Chr4:42497248-42497267 MsG0480020498.01.T01:CDS 40.0%
GTACGCAACTCTTGAAGAAT+TGG - Chr4:42496715-42496734 None:intergenic 40.0%
GTAGACAAACATCCCAAACA+TGG - Chr4:42497681-42497700 None:intergenic 40.0%
GTATAGCACTTTCATCTCCA+AGG + Chr4:42497214-42497233 MsG0480020498.01.T01:CDS 40.0%
GTCACCTAATAACCACTCTT+GGG - Chr4:42495366-42495385 None:intergenic 40.0%
GTTGGGAAAGGAGAAAATGA+AGG - Chr4:42493252-42493271 None:intergenic 40.0%
TAAAAAGGCCTCTGGTCTAA+TGG + Chr4:42494762-42494781 MsG0480020498.01.T01:intron 40.0%
TAACAACAGAGAACGCTAAC+TGG - Chr4:42497089-42497108 None:intergenic 40.0%
TAAGGTCCTGACTGCATTAA+TGG - Chr4:42497400-42497419 None:intergenic 40.0%
TACATAGTCGGTACGCTATT+TGG - Chr4:42496678-42496697 None:intergenic 40.0%
TAGTAAAAAGCGGTTGGGAA+AGG - Chr4:42493264-42493283 None:intergenic 40.0%
TATGCAGTCAGAACATGTGT+TGG - Chr4:42497535-42497554 None:intergenic 40.0%
TATTTGAGGAACGGTTTCAC+TGG - Chr4:42497002-42497021 None:intergenic 40.0%
TCCCATAGCCAATTTGTGAA+GGG + Chr4:42494298-42494317 MsG0480020498.01.T01:intron 40.0%
TCCCTTCACAAATTGGCTAT+GGG - Chr4:42494302-42494321 None:intergenic 40.0%
TCTCTTTGACCGAGTAATCA+AGG + Chr4:42494539-42494558 MsG0480020498.01.T01:intron 40.0%
TCTTGAAGAATTGGGTTCGA+AGG - Chr4:42496706-42496725 None:intergenic 40.0%
TGGGAAAGGAGAAAATGAAG+GGG - Chr4:42493250-42493269 None:intergenic 40.0%
TGTCACCTAATAACCACTCT+TGG - Chr4:42495367-42495386 None:intergenic 40.0%
TTCCCTACATCCTCAAATGT+TGG + Chr4:42497826-42497845 MsG0480020498.01.T01:three_prime_UTR 40.0%
TTGAAGAATTGGGTTCGAAG+GGG - Chr4:42496704-42496723 None:intergenic 40.0%
! AACTTTCAAGTACCCAAGAG+TGG + Chr4:42495351-42495370 MsG0480020498.01.T01:intron 40.0%
! AGCTTTAACCATTAGACCAG+AGG - Chr4:42494773-42494792 None:intergenic 40.0%
! AGGAGAAAATGAAGGGGTTT+TGG - Chr4:42493244-42493263 None:intergenic 40.0%
! CAGGCTTCTGTTATTTGATC+GGG + Chr4:42494038-42494057 MsG0480020498.01.T01:intron 40.0%
! CATGCAAAAAGCCTTGCTTT+TGG - Chr4:42494599-42494618 None:intergenic 40.0%
! CGCTTAACGGCTTAATCTTT+TGG + Chr4:42494488-42494507 MsG0480020498.01.T01:intron 40.0%
! TCTTATCCAGTAAGTTGGGT+CGG + Chr4:42493472-42493491 MsG0480020498.01.T01:intron 40.0%
! TTAGAAGGCAGTGTTGTTGA+TGG - Chr4:42494386-42494405 None:intergenic 40.0%
!! AAGAATTTTGAAGGCTGAGG+TGG + Chr4:42497762-42497781 MsG0480020498.01.T01:exon 40.0%
!! ATGCCTACAAATTTGTTGGG+CGG + Chr4:42494929-42494948 MsG0480020498.01.T01:intron 40.0%
!! ATTTTAATGCCCGCCTTTTC+AGG + Chr4:42496193-42496212 MsG0480020498.01.T01:intron 40.0%
!! CAGAAGAATTTTGAAGGCTG+AGG + Chr4:42497759-42497778 MsG0480020498.01.T01:exon 40.0%
!! GCTTAATCTTTTGGGAGAAC+TGG + Chr4:42494497-42494516 MsG0480020498.01.T01:intron 40.0%
!! TGCAAAAAGCCTTGCTTTTG+GGG - Chr4:42494597-42494616 None:intergenic 40.0%
!!! AGGGGTTTTGGAGAATTGAA+AGG - Chr4:42493232-42493251 None:intergenic 40.0%
AAACACGCTATTGCAGCCTA+TGG - Chr4:42494341-42494360 None:intergenic 45.0%
AAGCAGAAGGAACTACGAGA+AGG - Chr4:42493330-42493349 None:intergenic 45.0%
AAGTTAAATAGGGGGAGCCT+TGG + Chr4:42496800-42496819 MsG0480020498.01.T01:intron 45.0%
ACAAACATCCCAAACATGGC+TGG - Chr4:42497677-42497696 None:intergenic 45.0%
ACACTTACCTCAAGGCATGT+AGG + Chr4:42495730-42495749 MsG0480020498.01.T01:intron 45.0%
ACGCACTTAGACAACATGAG+TGG - Chr4:42496154-42496173 None:intergenic 45.0%
AGCAGAAGGAACTACGAGAA+GGG - Chr4:42493329-42493348 None:intergenic 45.0%
AGGAACGGTTTCACTGGATA+TGG - Chr4:42496996-42497015 None:intergenic 45.0%
CACAGAATTCGCAACTGGAT+TGG - Chr4:42495243-42495262 None:intergenic 45.0%
CATGTTGATACAGGAGCTGA+AGG - Chr4:42496967-42496986 None:intergenic 45.0%
CCAGTTGCGAATTCTGTGTA+TGG + Chr4:42495245-42495264 MsG0480020498.01.T01:intron 45.0%
CCATACACAGAATTCGCAAC+TGG - Chr4:42495248-42495267 None:intergenic 45.0%
CGCATCACATCCACTATTTC+AGG - Chr4:42493596-42493615 None:intergenic 45.0%
CGGCAGCAATTTATGGACTT+TGG + Chr4:42497247-42497266 MsG0480020498.01.T01:CDS 45.0%
CTACTTCTCTCTGTGGGTAT+TGG + Chr4:42495832-42495851 MsG0480020498.01.T01:intron 45.0%
CTCCCATAGCCAATTTGTGA+AGG + Chr4:42494297-42494316 MsG0480020498.01.T01:intron 45.0%
CTTATAGCAGCCTGAAAAGG+CGG - Chr4:42496206-42496225 None:intergenic 45.0%
GAGAAAACAATCAGGGGTAG+CGG + Chr4:42497192-42497211 MsG0480020498.01.T01:CDS 45.0%
GATCAAACCTACATGCCTTG+AGG - Chr4:42495740-42495759 None:intergenic 45.0%
GCAGGAATCCCTTCACAAAT+TGG - Chr4:42494309-42494328 None:intergenic 45.0%
GCAGTCATCTTCCTGTTTAC+TGG - Chr4:42495398-42495417 None:intergenic 45.0%
GCGCTTTCAAGAAAGGGATT+TGG - Chr4:42497586-42497605 None:intergenic 45.0%
GCTCAGCTACCTTGATTACT+CGG - Chr4:42494551-42494570 None:intergenic 45.0%
GGAAGATGACTGCAAAGGTA+TGG + Chr4:42495405-42495424 MsG0480020498.01.T01:intron 45.0%
GGGTGTAGTAAAAAGCGGTT+GGG - Chr4:42493269-42493288 None:intergenic 45.0%
TAATAGTGAGTCGACGAGAC+TGG - Chr4:42495932-42495951 None:intergenic 45.0%
TACCTTGTTGGCATGAAGCA+CGG + Chr4:42493804-42493823 MsG0480020498.01.T01:intron 45.0%
TCTACCACATCATTCCACCT+TGG - Chr4:42494265-42494284 None:intergenic 45.0%
TGAAGAATTGGGTTCGAAGG+GGG - Chr4:42496703-42496722 None:intergenic 45.0%
TGAGTCTTGCTCTGTTGTCT+AGG - Chr4:42495632-42495651 None:intergenic 45.0%
TGGTGTCTGCATGTTGATAC+AGG - Chr4:42496976-42496995 None:intergenic 45.0%
TTATAGCAGCCTGAAAAGGC+GGG - Chr4:42496205-42496224 None:intergenic 45.0%
! AGCAAGGCTTTTTGCATGAG+TGG + Chr4:42494601-42494620 MsG0480020498.01.T01:intron 45.0%
! CAGAGGGGTGTAGTAAAAAG+CGG - Chr4:42493274-42493293 None:intergenic 45.0%
! GCTAGTGAAGCAAGGGTTTT+AGG + Chr4:42494684-42494703 MsG0480020498.01.T01:intron 45.0%
! GGTATTGGATTGGGTTGTAG+CGG + Chr4:42495847-42495866 MsG0480020498.01.T01:intron 45.0%
! TCAGAACATGTGTTGGTCGT+TGG - Chr4:42497528-42497547 None:intergenic 45.0%
! TCGAAGGGGGTATACATAGT+CGG - Chr4:42496690-42496709 None:intergenic 45.0%
! TTCGTGGTACTTTTGCGAAC+TGG + Chr4:42496503-42496522 MsG0480020498.01.T01:intron 45.0%
!! AAAGGATTAGCCAAGGGAGT+AGG + Chr4:42493123-42493142 MsG0480020498.01.T01:five_prime_UTR 45.0%
!! AAGGATTAGCCAAGGGAGTA+GGG + Chr4:42493124-42493143 MsG0480020498.01.T01:five_prime_UTR 45.0%
!! CTCTCTGTGGGTATTGGATT+GGG + Chr4:42495838-42495857 MsG0480020498.01.T01:intron 45.0%
!! GCAAAAAGCCTTGCTTTTGG+GGG - Chr4:42494596-42494615 None:intergenic 45.0%
!! TCTCTCTGTGGGTATTGGAT+TGG + Chr4:42495837-42495856 MsG0480020498.01.T01:intron 45.0%
!! TTCGCAAAAGTACCACGAAC+CGG - Chr4:42496502-42496521 None:intergenic 45.0%
!! TTCGCAACTGGATTGGTACA+AGG - Chr4:42495236-42495255 None:intergenic 45.0%
!! ATATACTTAAAAAATAATAA+GGG - Chr4:42493675-42493694 None:intergenic 5.0%
!! TTAAACTAAAAATAAAATAT+TGG - Chr4:42494714-42494733 None:intergenic 5.0%
!!! ATTTTTATAATATTTTGTTT+TGG + Chr4:42493534-42493553 MsG0480020498.01.T01:intron 5.0%
ACAACTTTACCGTTGCGCCA+AGG - Chr4:42496820-42496839 None:intergenic 50.0%
ACCTTGGAGCTAGTGAAGCA+AGG + Chr4:42494676-42494695 MsG0480020498.01.T01:intron 50.0%
AGCTTGTGCCAGCCATGTTT+GGG + Chr4:42497666-42497685 MsG0480020498.01.T01:intron 50.0%
AGTGCTAGCAACACCTCTGT+AGG + Chr4:42494812-42494831 MsG0480020498.01.T01:intron 50.0%
ATCCGTGCTTCATGCCAACA+AGG - Chr4:42493809-42493828 None:intergenic 50.0%
ATCTCCAAGGCTTGTGATCC+CGG + Chr4:42497227-42497246 MsG0480020498.01.T01:CDS 50.0%
ATGTAGCCGACCCAACTTAC+TGG - Chr4:42493481-42493500 None:intergenic 50.0%
CAATTCGCGGTTCTCTGGTT+GGG - Chr4:42496468-42496487 None:intergenic 50.0%
CACTAGCTCCAAGGTTGGAT+CGG - Chr4:42494671-42494690 None:intergenic 50.0%
CAGAAGGAACTACGAGAAGG+GGG - Chr4:42493327-42493346 None:intergenic 50.0%
CCTTGGAGCTAGTGAAGCAA+GGG + Chr4:42494677-42494696 MsG0480020498.01.T01:intron 50.0%
CTATCTATGCTGTGCTGCCA+TGG + Chr4:42493176-42493195 MsG0480020498.01.T01:five_prime_UTR 50.0%
CTCCTCAGACTATTGTGTCC+CGG - Chr4:42493952-42493971 None:intergenic 50.0%
GAACTACGAGAAGGGGGAAA+AGG - Chr4:42493321-42493340 None:intergenic 50.0%
GCACCGCCCAACAAATTTGT+AGG - Chr4:42494935-42494954 None:intergenic 50.0%
GCAGAAGGAACTACGAGAAG+GGG - Chr4:42493328-42493347 None:intergenic 50.0%
GGCAGCACAGCATAGATAGA+TGG - Chr4:42493175-42493194 None:intergenic 50.0%
GGGGTGTAGTAAAAAGCGGT+TGG - Chr4:42493270-42493289 None:intergenic 50.0%
GTGATCCCGGCAGCAATTTA+TGG + Chr4:42497240-42497259 MsG0480020498.01.T01:CDS 50.0%
TAGCACCCGATAGCATTGCA+GGG + Chr4:42494645-42494664 MsG0480020498.01.T01:intron 50.0%
TGCTTCACTAGCTCCAAGGT+TGG - Chr4:42494676-42494695 None:intergenic 50.0%
TGGAAATGACCAGCTGCATC+CGG + Chr4:42497846-42497865 MsG0480020498.01.T01:three_prime_UTR 50.0%
TGTCGTGTCTGTGTAGTGTC+TGG - Chr4:42493856-42493875 None:intergenic 50.0%
TTAGCACCCGATAGCATTGC+AGG + Chr4:42494644-42494663 MsG0480020498.01.T01:intron 50.0%
TTGTGAAGGGATTCCTGCCA+TGG + Chr4:42494311-42494330 MsG0480020498.01.T01:intron 50.0%
! ATGCGATTGGGGTCCTTTTC+AGG + Chr4:42496228-42496247 MsG0480020498.01.T01:CDS 50.0%
! GAAGGCAGTGTTGTTGATGG+CGG - Chr4:42494383-42494402 None:intergenic 50.0%
!! ACAAATTTGTTGGGCGGTGC+TGG + Chr4:42494935-42494954 MsG0480020498.01.T01:intron 50.0%
!! CAAATTTGTTGGGCGGTGCT+GGG + Chr4:42494936-42494955 MsG0480020498.01.T01:intron 50.0%
AACATGGCTGGCACAAGCTG+AGG - Chr4:42497665-42497684 None:intergenic 55.0%
ACATGGCTGGCACAAGCTGA+GGG - Chr4:42497664-42497683 None:intergenic 55.0%
ATCGGCCCTGCAATGCTATC+GGG - Chr4:42494653-42494672 None:intergenic 55.0%
CACCGGGACACAATAGTCTG+AGG + Chr4:42493947-42493966 MsG0480020498.01.T01:intron 55.0%
CAGCTTGTGCCAGCCATGTT+TGG + Chr4:42497665-42497684 MsG0480020498.01.T01:intron 55.0%
CCAACCAGAGAACCGCGAAT+TGG + Chr4:42496466-42496485 MsG0480020498.01.T01:intron 55.0%
CCAATTCGCGGTTCTCTGGT+TGG - Chr4:42496469-42496488 None:intergenic 55.0%
CCCTTGCTTCACTAGCTCCA+AGG - Chr4:42494680-42494699 None:intergenic 55.0%
CGAACCAATTCGCGGTTCTC+TGG - Chr4:42496473-42496492 None:intergenic 55.0%
GAGACGCTGATACCACATCG+CGG - Chr4:42494523-42494542 None:intergenic 55.0%
GATCGGCCCTGCAATGCTAT+CGG - Chr4:42494654-42494673 None:intergenic 55.0%
GCTGCCAAGGTGGAATGATG+TGG + Chr4:42494258-42494277 MsG0480020498.01.T01:intron 55.0%
TAGCCAAGGGAGTAGGGTGA+GGG + Chr4:42493130-42493149 MsG0480020498.01.T01:five_prime_UTR 55.0%
TGCTTAGTTCCGGATGCAGC+TGG - Chr4:42497858-42497877 None:intergenic 55.0%
TTAGCCAAGGGAGTAGGGTG+AGG + Chr4:42493129-42493148 MsG0480020498.01.T01:five_prime_UTR 55.0%
! ACCTGGTTCGTAGTTCGCTC+CGG - Chr4:42496763-42496782 None:intergenic 55.0%
! CGGTACGCTATTTGGGTTCG+CGG - Chr4:42496670-42496689 None:intergenic 55.0%
!! GCAGTGTTGTTGATGGCGGA+AGG - Chr4:42494379-42494398 None:intergenic 55.0%
ACCGGAGCGAACTACGAACC+AGG + Chr4:42496759-42496778 MsG0480020498.01.T01:intron 60.0%
AGCCAAGGGAGTAGGGTGAG+GGG + Chr4:42493131-42493150 MsG0480020498.01.T01:five_prime_UTR 60.0%
CACCTCAGCCCCCAAAAGCA+AGG + Chr4:42494585-42494604 MsG0480020498.01.T01:intron 60.0%
GGTTCGCGCGAACCAATTCG+CGG - Chr4:42496481-42496500 None:intergenic 60.0%
GTTCGCTCCGGTACGTGGTA+CGG - Chr4:42496751-42496770 None:intergenic 60.0%
TCCGGTACGTGGTACGGGTT+CGG - Chr4:42496745-42496764 None:intergenic 60.0%
TCGTAGTTCGCTCCGGTACG+TGG - Chr4:42496756-42496775 None:intergenic 60.0%
TGTCGGACACGGTCTGACAC+CGG + Chr4:42493930-42493949 MsG0480020498.01.T01:intron 60.0%
TTCCTGCCATGGCGTGCCAT+AGG + Chr4:42494322-42494341 MsG0480020498.01.T01:intron 60.0%
TTCGCGGTTCTCTGGTTGGG+AGG - Chr4:42496465-42496484 None:intergenic 60.0%
TTCGCTCCGGTACGTGGTAC+GGG - Chr4:42496750-42496769 None:intergenic 60.0%
TTGCAGCCTATGGCACGCCA+TGG - Chr4:42494331-42494350 None:intergenic 60.0%
TTGCAGGGCCGATCCAACCT+TGG + Chr4:42494660-42494679 MsG0480020498.01.T01:intron 60.0%
!! AGCCTTGCTTTTGGGGGCTG+AGG - Chr4:42494590-42494609 None:intergenic 60.0%
!! GCGAATTGGTTCGCGCGAAC+CGG + Chr4:42496480-42496499 MsG0480020498.01.T01:intron 60.0%
!! TGCTTTTGGGGGCTGAGGTG+AGG - Chr4:42494585-42494604 None:intergenic 60.0%
ACCCCCTCACCCTACTCCCT+TGG - Chr4:42493136-42493155 None:intergenic 65.0%
AGCCTATGGCACGCCATGGC+AGG - Chr4:42494327-42494346 None:intergenic 65.0%
CAGTCATGGCGCTGCCAAGG+TGG + Chr4:42494248-42494267 MsG0480020498.01.T01:intron 65.0%
CCCGAACCCGTACCACGTAC+CGG + Chr4:42496741-42496760 MsG0480020498.01.T01:intron 65.0%
CCGGTACGTGGTACGGGTTC+GGG - Chr4:42496744-42496763 None:intergenic 65.0%
GCCAAGGGAGTAGGGTGAGG+GGG + Chr4:42493132-42493151 MsG0480020498.01.T01:five_prime_UTR 65.0%
GCTGCCGGGATCACAAGCCT+TGG - Chr4:42497234-42497253 None:intergenic 65.0%
GGGAGTAGGGTGAGGGGGTA+AGG + Chr4:42493137-42493156 MsG0480020498.01.T01:five_prime_UTR 65.0%
GTCGGACACGGTCTGACACC+GGG + Chr4:42493931-42493950 MsG0480020498.01.T01:intron 65.0%
GTGGTACGGGTTCGGGTACG+CGG - Chr4:42496737-42496756 None:intergenic 65.0%
TAGGGGGAGCCTTGGCGCAA+CGG + Chr4:42496808-42496827 MsG0480020498.01.T01:intron 65.0%
TGGCAGTCATGGCGCTGCCA+AGG + Chr4:42494245-42494264 MsG0480020498.01.T01:intron 65.0%
TGGGAGAACTGGCCGCGATG+TGG + Chr4:42494508-42494527 MsG0480020498.01.T01:intron 65.0%
!! GGTTCGCGCGAACCGGTTCG+TGG + Chr4:42496487-42496506 MsG0480020498.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 42493115 42498050 42493115 ID=MsG0480020498.01;Name=MsG0480020498.01
Chr4 mRNA 42493115 42498050 42493115 ID=MsG0480020498.01.T01;Parent=MsG0480020498.01;Name=MsG0480020498.01.T01;_AED=0.49;_eAED=0.49;_QI=318|0.5|0.8|1|0.75|0.6|5|278|120
Chr4 exon 42493115 42493333 42493115 ID=MsG0480020498.01.T01:exon:4500;Parent=MsG0480020498.01.T01
Chr4 exon 42494993 42495166 42494993 ID=MsG0480020498.01.T01:exon:4501;Parent=MsG0480020498.01.T01
Chr4 exon 42496215 42496249 42496215 ID=MsG0480020498.01.T01:exon:4502;Parent=MsG0480020498.01.T01
Chr4 exon 42497167 42497314 42497167 ID=MsG0480020498.01.T01:exon:4503;Parent=MsG0480020498.01.T01
Chr4 exon 42497668 42498050 42497668 ID=MsG0480020498.01.T01:exon:4504;Parent=MsG0480020498.01.T01
Chr4 five_prime_UTR 42493115 42493333 42493115 ID=MsG0480020498.01.T01:five_prime_utr;Parent=MsG0480020498.01.T01
Chr4 five_prime_UTR 42494993 42495091 42494993 ID=MsG0480020498.01.T01:five_prime_utr;Parent=MsG0480020498.01.T01
Chr4 CDS 42495092 42495166 42495092 ID=MsG0480020498.01.T01:cds;Parent=MsG0480020498.01.T01
Chr4 CDS 42496215 42496249 42496215 ID=MsG0480020498.01.T01:cds;Parent=MsG0480020498.01.T01
Chr4 CDS 42497167 42497314 42497167 ID=MsG0480020498.01.T01:cds;Parent=MsG0480020498.01.T01
Chr4 CDS 42497668 42497772 42497668 ID=MsG0480020498.01.T01:cds;Parent=MsG0480020498.01.T01
Chr4 three_prime_UTR 42497773 42498050 42497773 ID=MsG0480020498.01.T01:three_prime_utr;Parent=MsG0480020498.01.T01
Gene Sequence

>MsG0480020498.01.T01

ATGGATATCAGAAATTCTGGTGATTATGATGTTAGTAAGCTCAACGACGACAACAATGCTCAACAAATAGAACAGGCTGCTATAAGTTATGCGATTGGGGTCCTTTTCAGAAGCGAAGATCTTAGTGATTCTTTCGAGAAAACAATCAGGGGTAGCGGTATAGCACTTTCATCTCCAAGGCTTGTGATCCCGGCAGCAATTTATGGACTTTGGGCTGTGTCTCATCAGTATTTTATCAATGACTTGTTGGATTTTCAGCTTGTGCCAGCCATGTTTGGGATGTTTGTCTACAAAGCTGCTGCTCTTGTGCAAGTTTATAGAGACAATAAAGACTTAGGCTTTGAATTTCCAGAAGAATTTTGA

Protein sequence

>MsG0480020498.01.T01

MDIRNSGDYDVSKLNDDNNAQQIEQAAISYAIGVLFRSEDLSDSFEKTIRGSGIALSSPRLVIPAAIYGLWAVSHQYFINDLLDFQLVPAMFGMFVYKAAALVQVYRDNKDLGFEFPEEF*