AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112770 MtrunA17_Chr1g0181141 91.230 992 45 6 1 978 1 964 0.0 1624
Msa0112770 MtrunA17_Chr1g0167361 90.726 992 43 9 1 978 1 957 0.0 1591
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112770 AT1G69070.2 48.854 960 394 16 25 970 18 894 0.0 770
Msa0112770 AT1G69070.1 48.903 957 395 16 25 970 18 891 0.0 769

Find 201 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGATGATTTCGCCATTCT+TGG 0.167175 1_3:+28287307 None:intergenic
AAACTAAAGAAGAAAGAATT+AGG 0.178928 1_3:+28287393 None:intergenic
TTCGTTCATCACTTCCTTCT+TGG 0.196187 1_3:+28285961 None:intergenic
TCTTCACTACTGACAGTTTC+AGG 0.214470 1_3:-28280566 Msa0112770:intron
CTGCCAGTTATATCATCTTA+TGG 0.216501 1_3:-28280691 Msa0112770:intron
AAAATTGGTGAAAATATTTC+TGG 0.216827 1_3:+28280181 None:intergenic
TGAAGAAACTATGACTAAAA+AGG 0.225009 1_3:-28284855 Msa0112770:CDS
TGCTTTCATGGCTACTGCTT+CGG 0.243552 1_3:+28287219 None:intergenic
GATGAAGGCCTTGATGATTT+TGG 0.256994 1_3:-28286989 Msa0112770:CDS
TCCTCCAACGACTATCTTCT+TGG 0.257256 1_3:+28284460 None:intergenic
TTCAAAGCTTTCATCTTGTT+TGG 0.273827 1_3:+28285715 None:intergenic
GCAGAAGTTGATAAGGTAAA+AGG 0.285083 1_3:-28284563 Msa0112770:CDS
GCTTTCATGGCTACTGCTTC+GGG 0.299044 1_3:+28287220 None:intergenic
TTTGCAGATATTTCAGATTT+GGG 0.299631 1_3:-28286399 Msa0112770:intron
TCAAGTAGTAATCTCAAAAT+TGG 0.299845 1_3:+28280166 None:intergenic
TTCGGAGCTTCAATTATATA+AGG 0.299927 1_3:+28284413 None:intergenic
AGAATACTACTTTGAAAGAT+TGG 0.304400 1_3:-28284691 Msa0112770:CDS
ATATCACGGCCAGATGTTAT+TGG 0.309858 1_3:+28283012 None:intergenic
ATCAATAAACTCGGACGATT+TGG 0.313352 1_3:+28287030 None:intergenic
GCACATATTGCAGCAAAGTA+TGG 0.315156 1_3:+28283338 None:intergenic
CTTTCAGCTCGCACACGGTC+TGG 0.326776 1_3:+28279836 None:intergenic
AAAGTTTGAATAAATACTAT+TGG 0.330563 1_3:+28282012 None:intergenic
TGAATAAATACTATTGGTTC+AGG 0.334462 1_3:+28282018 None:intergenic
TTCTTGATGCAGCTATGTTA+AGG 0.339589 1_3:-28279873 Msa0112770:intron
CAAGAACATGCTTTCAAATC+TGG 0.340841 1_3:-28279653 Msa0112770:CDS
TCTTCGCTTTCTTGTATTTG+AGG 0.343747 1_3:-28280842 Msa0112770:CDS
TTCCCTAAAGTCACAGTAAC+AGG 0.351877 1_3:+28286303 None:intergenic
TTCAGTAATTTGATTGGAAC+TGG 0.357854 1_3:+28280016 None:intergenic
ACGTGCCAACCCCATTCTTT+TGG 0.359535 1_3:+28287108 None:intergenic
AAGCATGTTCTTGCTCTTGA+AGG 0.361044 1_3:+28279663 None:intergenic
AAACATCCTTGGTGTTTAGA+AGG 0.369544 1_3:+28279339 None:intergenic
TGACCAACTTGTCAGACAAT+TGG 0.376534 1_3:-28285501 Msa0112770:CDS
CTTCTTCTTCTTGCTGGTGG+TGG 0.378523 1_3:+28287264 None:intergenic
GATGATGATGATATCAGTTC+AGG 0.380797 1_3:-28284659 Msa0112770:CDS
TTAGGATTCAGTAATTTGAT+TGG 0.384079 1_3:+28280010 None:intergenic
AAAATATGCCAAATGCATTA+CGG 0.387295 1_3:-28280129 Msa0112770:CDS
AACTAAAGAAGAAAGAATTA+GGG 0.390512 1_3:+28287394 None:intergenic
GATTTCGCCATTCTTGGGTT+TGG 0.391028 1_3:+28287313 None:intergenic
GACAATGAATAATTCTGTTC+AGG 0.394333 1_3:-28285629 Msa0112770:intron
AGGTAAAAGGATTGAATGTT+GGG 0.395632 1_3:-28284550 Msa0112770:CDS
AGTATCACAGGAGTCATAAC+TGG 0.397195 1_3:+28283063 None:intergenic
AAGGTAAAAGGATTGAATGT+TGG 0.397569 1_3:-28284551 Msa0112770:CDS
AAAGCAAGAGCTGAGAAGTA+TGG 0.398033 1_3:-28279701 Msa0112770:CDS
AAACAAGATGAAAGCTTTGA+AGG 0.398300 1_3:-28285713 Msa0112770:CDS
ATTACTGAATCCTAAGTTTG+AGG 0.398976 1_3:-28280002 Msa0112770:CDS
GTGAAGAATGGAGAGTCTTC+AGG 0.403043 1_3:+28280582 None:intergenic
TCTTGATGCAGCTATGTTAA+GGG 0.404207 1_3:-28279872 Msa0112770:intron
CTTTGAAGATGAGATGCTTC+GGG 0.407003 1_3:-28286710 Msa0112770:CDS
GATCCCCACATATTATTTGA+AGG 0.409851 1_3:-28279475 Msa0112770:three_prime_UTR
TCGATGATTTCGCCATTCTT+GGG 0.414032 1_3:+28287308 None:intergenic
GATGAATTTGAAGGAATTGA+TGG 0.414203 1_3:-28286748 Msa0112770:CDS
AAATATGCCAAATGCATTAC+GGG 0.415102 1_3:-28280128 Msa0112770:CDS
TTTGAAGGAATTGATGGTCT+TGG 0.415825 1_3:-28286742 Msa0112770:CDS
TCCGTACTCATCTCTATCAA+TGG 0.415890 1_3:+28283365 None:intergenic
GAGTTTATTGATAGAAGAAT+TGG 0.416122 1_3:-28287019 Msa0112770:CDS
AGGTGAGGCGTGAAGCTAAA+GGG 0.417578 1_3:-28279796 Msa0112770:CDS
CGCTATGTCTCTTGCGATTG+TGG 0.418991 1_3:-28283119 Msa0112770:CDS
CGTAGGAAGTTCGAAGTAAT+GGG 0.419506 1_3:-28287151 Msa0112770:CDS
GAATACTACTTTGAAAGATT+GGG 0.420352 1_3:-28284690 Msa0112770:CDS
TATCACGGCCAGATGTTATT+GGG 0.421115 1_3:+28283013 None:intergenic
TCATCACCAGAGAGAGATCT+TGG 0.422739 1_3:+28284902 None:intergenic
ACAAGTTGGTCATATTCATC+TGG 0.423674 1_3:+28285512 None:intergenic
GAATAAATGTTAAAACTTGT+GGG 0.424369 1_3:-28279588 Msa0112770:three_prime_UTR
TCCTCATTAATGCGCAATAG+TGG 0.429661 1_3:+28280651 None:intergenic
CATAATTCTTCAAAGGTCTT+CGG 0.431108 1_3:+28284395 None:intergenic
TGAGAGAAGAGATGAGGAGG+AGG 0.431745 1_3:-28284813 Msa0112770:CDS
AGGCATTGATATATCCTTGT+AGG 0.432380 1_3:+28280224 None:intergenic
CATAACTGGATGTCTAAAAT+CGG 0.433346 1_3:+28283077 None:intergenic
GACCAACTTGTCAGACAATT+GGG 0.434843 1_3:-28285500 Msa0112770:CDS
AAGAGCTGCAGAAGTTGATA+AGG 0.435279 1_3:-28284570 Msa0112770:CDS
GACGATGATGATGAATTTGA+AGG 0.438628 1_3:-28286757 Msa0112770:CDS
AAATCTGGACAACTAGGAAA+AGG 0.438682 1_3:-28279638 Msa0112770:CDS
ACTTTGAAGATGAGATGCTT+CGG 0.439081 1_3:-28286711 Msa0112770:CDS
TCTCTCCTTCAAATAATATG+TGG 0.439934 1_3:+28279470 None:intergenic
CCAACCCATTCGAGTCAATC+TGG 0.442365 1_3:-28287177 Msa0112770:CDS
AGATAAGGACTTCACTTCTC+TGG 0.442591 1_3:-28285770 Msa0112770:CDS
TATATCATGCGAAAATTCTC+AGG 0.447408 1_3:-28281962 Msa0112770:intron
GATGAAAGCTTTGAAGGCTC+TGG 0.454907 1_3:-28285707 Msa0112770:CDS
AAGAGAACGTCTAGAGGAGT+TGG 0.457721 1_3:-28285414 Msa0112770:CDS
GAGATCGCAGCGCGAACGTC+AGG 0.458888 1_3:-28286954 Msa0112770:intron
CTTGCTGGTGGTGGTTCCGT+TGG 0.462169 1_3:+28287273 None:intergenic
GATTCTGTTGGATGTGTAAA+GGG 0.462358 1_3:-28284503 Msa0112770:CDS
CTCTCCTTCAAATAATATGT+GGG 0.465901 1_3:+28279471 None:intergenic
TGATATATGTTTACTTTCAG+TGG 0.466596 1_3:+28281978 None:intergenic
TCTTAATCATCAATCGGATT+CGG 0.468845 1_3:-28284337 Msa0112770:CDS
TGAATAAATGTTAAAACTTG+TGG 0.472318 1_3:-28279589 Msa0112770:three_prime_UTR
GGATGTGTAAAGGGAGATAA+TGG 0.473750 1_3:-28284494 Msa0112770:CDS
ACGTAGGAAGTTCGAAGTAA+TGG 0.476055 1_3:-28287152 Msa0112770:CDS
GAACGAACTCAAGTTATCAT+AGG 0.478056 1_3:+28280204 None:intergenic
AAAGGAGATACCAAAAGAAT+GGG 0.479733 1_3:-28287118 Msa0112770:CDS
AAGATAGCTTGTCTGCTAAA+CGG 0.481368 1_3:-28285651 Msa0112770:CDS
GAAAGGAGATACCAAAAGAA+TGG 0.481481 1_3:-28287119 Msa0112770:CDS
CTTTGAAGAATTATGTTCAC+TGG 0.483060 1_3:-28284387 Msa0112770:CDS
CTACTTCTTGCTTGATGTGA+AGG 0.483308 1_3:-28279747 Msa0112770:CDS
CTCAAAACCAAACCCAAGAA+TGG 0.485754 1_3:-28287320 Msa0112770:exon
TCATATTCTCAAGAACGAAC+TGG 0.487217 1_3:+28279414 None:intergenic
ACACTATCTTAATCATCAAT+CGG 0.489425 1_3:-28284343 Msa0112770:CDS
ATCCCAATTGTCTGACAAGT+TGG 0.491655 1_3:+28285498 None:intergenic
GCAAAGAGAAATGATTCTGT+TGG 0.491781 1_3:-28284515 Msa0112770:CDS
AAATTGGTGAAAATATTTCT+GGG 0.493600 1_3:+28280182 None:intergenic
GGCATTGATATATCCTTGTA+GGG 0.493842 1_3:+28280225 None:intergenic
ATGCAGAGTCCAGGGGAAGC+TGG 0.497735 1_3:-28286354 Msa0112770:CDS
TTTCAACTTTAGTTAGTCAC+TGG 0.500864 1_3:-28279388 Msa0112770:three_prime_UTR
TCTTGAGAGAAGAGATGAGG+AGG 0.501654 1_3:-28284816 Msa0112770:CDS
ATGCGTTGCCCAATAACATC+TGG 0.502843 1_3:-28283021 Msa0112770:CDS
CTGACGGTGGGGAAAATGTA+AGG 0.506509 1_3:-28286326 Msa0112770:CDS
GCCACTATTGCGCATTAATG+AGG 0.509019 1_3:-28280652 Msa0112770:CDS
GAGGTGAGGCGTGAAGCTAA+AGG 0.509324 1_3:-28279797 Msa0112770:CDS
TGGTGAAGATTCTGATGATT+CGG 0.509906 1_3:-28284768 Msa0112770:CDS
AAGCTGGTCTAGCTGACGGT+GGG 0.510032 1_3:-28286338 Msa0112770:CDS
AGGTCTGAAGATTCTGATGA+AGG 0.511371 1_3:-28284743 Msa0112770:CDS
GAGAAACCAAGATCTCTCTC+TGG 0.511990 1_3:-28284908 Msa0112770:CDS
GCTCATGGTATGCAGAGTCC+AGG 0.514901 1_3:-28286363 Msa0112770:CDS
CACTTCTCTGGCTCATTCCG+AGG 0.518270 1_3:-28285758 Msa0112770:CDS
AATCTGGACAACTAGGAAAA+GGG 0.524082 1_3:-28279637 Msa0112770:CDS
GAAGAAGAACAACAACAAGA+TGG 0.524250 1_3:-28287245 Msa0112770:CDS
AAACTGTCAGTAGTGAAGAA+TGG 0.525835 1_3:+28280570 None:intergenic
TCAGCTAGACCAGCTTCCCC+TGG 0.526667 1_3:+28286345 None:intergenic
AAGGAATTGATGGTCTTGGA+AGG 0.527484 1_3:-28286738 Msa0112770:CDS
CACATATTGCAGCAAAGTAT+GGG 0.528243 1_3:+28283339 None:intergenic
GCGGCAGAGGGTGGTGGAGA+AGG 0.528431 1_3:+28287342 None:intergenic
GCTTTCAAATCTGGACAACT+AGG 0.529239 1_3:-28279644 Msa0112770:CDS
AACAGACACATAAACATCCT+TGG 0.529614 1_3:+28279328 None:intergenic
AGAATTGGTGAAAATGATGA+AGG 0.534823 1_3:-28287004 Msa0112770:CDS
GACAACAGAAGAGATTGCTC+AGG 0.535238 1_3:-28285441 Msa0112770:CDS
GATAGTCACTTACAAAGTAA+TGG 0.536245 1_3:+28279436 None:intergenic
AGAACGTCTAGAGGAGTTGG+AGG 0.537126 1_3:-28285411 Msa0112770:intron
GGCCCGCGTCATAATGCTCA+TGG 0.540640 1_3:-28286378 Msa0112770:CDS
GTGACCAGATTGACTCGAAT+GGG 0.542975 1_3:+28287173 None:intergenic
AGTCAGAGACAACAAGGCCT+CGG 0.545810 1_3:+28285741 None:intergenic
CTCATGGTATGCAGAGTCCA+GGG 0.546926 1_3:-28286362 Msa0112770:CDS
TGATTCTGTTGGATGTGTAA+AGG 0.550788 1_3:-28284504 Msa0112770:CDS
TCGCACATCAATAGTATCAC+AGG 0.550865 1_3:+28283051 None:intergenic
TGGATGAACATCATACTTTG+AGG 0.551930 1_3:-28280066 Msa0112770:CDS
AGACATAGCGTCTTTGAAGA+AGG 0.557041 1_3:+28283132 None:intergenic
TCTCTCTCTGGTGATGACCT+TGG 0.559106 1_3:-28284896 Msa0112770:CDS
GATACCAAGAAGATAGTCGT+TGG 0.560935 1_3:-28284464 Msa0112770:CDS
GGTTGAAGAGACTAGAACAT+CGG 0.560973 1_3:-28279504 Msa0112770:intron
CTATCACAGAAAGTAGCAGC+TGG 0.562254 1_3:-28283155 Msa0112770:intron
AACAGAAGAGATTGCTCAGG+AGG 0.562649 1_3:-28285438 Msa0112770:CDS
TGAAGAATTATGTTCACTGG+TGG 0.563978 1_3:-28284384 Msa0112770:CDS
GGGGAAGCTGGTCTAGCTGA+CGG 0.571066 1_3:-28286342 Msa0112770:CDS
TAGCTTTACCAAAATCATCA+AGG 0.572384 1_3:+28286981 None:intergenic
CCTGCTGGAAGGATTAGATA+AGG 0.573153 1_3:-28285785 Msa0112770:CDS
ACCATTGATAGAGATGAGTA+CGG 0.573361 1_3:-28283366 Msa0112770:CDS
AGATACCAAAAGAATGGGGT+TGG 0.573911 1_3:-28287113 Msa0112770:CDS
CGTGACCAGATTGACTCGAA+TGG 0.575204 1_3:+28287172 None:intergenic
GAAGCTGGTCTAGCTGACGG+TGG 0.576068 1_3:-28286339 Msa0112770:CDS
AAGAAGAACAACAACAAGAT+GGG 0.576229 1_3:-28287244 Msa0112770:CDS
TTGTGAACTTGAAGGTACAC+TGG 0.576930 1_3:+28280870 None:intergenic
GATTCTTGAGAGAAGAGATG+AGG 0.577765 1_3:-28284819 Msa0112770:CDS
GTTCTCTTGCTATTGAGAAG+AGG 0.577774 1_3:-28287087 Msa0112770:CDS
AATAAATGTTAAAACTTGTG+GGG 0.578482 1_3:-28279587 Msa0112770:three_prime_UTR
CAAGAGCTGAGAAGTATGGA+AGG 0.580782 1_3:-28279697 Msa0112770:CDS
GATATCAGTTCAGGTTCAGA+AGG 0.581311 1_3:-28284650 Msa0112770:CDS
ACCTCTGTTGAAACCCTACA+AGG 0.581709 1_3:-28280238 Msa0112770:CDS
ACGGGATAAAATTAAAGATG+TGG 0.582762 1_3:-28280110 Msa0112770:CDS
AGTTTCTTCATCGACAGAGA+AGG 0.583142 1_3:+28284868 None:intergenic
TTCACTCGAATCTTCAGCAG+CGG 0.584454 1_3:+28284964 None:intergenic
GACGAAGATGATGACGAGGA+CGG 0.586834 1_3:-28284596 Msa0112770:CDS
GGAGGAAAGAGAACGTCTAG+AGG 0.587808 1_3:-28285420 Msa0112770:CDS
GACCACGGGGAGTAAAATGT+TGG 0.589565 1_3:-28279175 Msa0112770:intron
GTTGTCTTCAGCCTATCTGA+AGG 0.592574 1_3:+28285458 None:intergenic
CAGTGAACATAATTCTTCAA+AGG 0.594264 1_3:+28284388 None:intergenic
CCTTATCTAATCCTTCCAGC+AGG 0.597560 1_3:+28285785 None:intergenic
TCTCTTGCGATTGTGGTCCA+TGG 0.601430 1_3:-28283112 Msa0112770:CDS
ATCGGAACATGGAAATACCA+TGG 0.602060 1_3:+28283095 None:intergenic
AATTCTTCTATCAATAAACT+CGG 0.602106 1_3:+28287021 None:intergenic
GAAGATGATGATATCAGTGC+TGG 0.602350 1_3:-28284626 Msa0112770:CDS
TACCATGAGCATTATGACGC+GGG 0.604868 1_3:+28286376 None:intergenic
TCCTTGTAGGGTTTCAACAG+AGG 0.609177 1_3:+28280237 None:intergenic
ACCAAGAAGATAGTCGTTGG+AGG 0.610706 1_3:-28284461 Msa0112770:CDS
AAGAACCAACGGCAATATCA+CGG 0.614085 1_3:+28282998 None:intergenic
AAAGATGAAGACCTGCTGGA+AGG 0.616144 1_3:-28285796 Msa0112770:CDS
GGTGAGGCGTGAAGCTAAAG+GGG 0.618945 1_3:-28279795 Msa0112770:CDS
TGGTTCAGTCAGAGACAACA+AGG 0.620464 1_3:+28285735 None:intergenic
TGCGTGCTCGTCCTTCAGAT+AGG 0.623838 1_3:-28285469 Msa0112770:CDS
AGATTCTGATGAAGGATCTG+AGG 0.625208 1_3:-28284735 Msa0112770:CDS
AGGAATTGATGGTCTTGGAA+GGG 0.625979 1_3:-28286737 Msa0112770:CDS
TCTCCTTCAAATAATATGTG+GGG 0.628876 1_3:+28279472 None:intergenic
TCGAAGTAATGGGTCAGAAG+CGG 0.631084 1_3:-28287141 Msa0112770:CDS
AGCTGGTCTAGCTGACGGTG+GGG 0.637224 1_3:-28286337 Msa0112770:CDS
GAGAGAAGAGATGAGGAGGA+GGG 0.637619 1_3:-28284812 Msa0112770:CDS
ACAGCGACATAAAACCAAGA+AGG 0.639354 1_3:-28285975 Msa0112770:intron
GGATGTCTAAAATCGGAACA+TGG 0.639818 1_3:+28283084 None:intergenic
AAGATTCTGATGATTCGGAA+AGG 0.644071 1_3:-28284763 Msa0112770:CDS
TCGAAACGCAGCATCGCCAA+CGG 0.648466 1_3:-28287289 Msa0112770:CDS
TGAGCTGATTAAGTTGAAAG+TGG 0.649315 1_3:-28280086 Msa0112770:CDS
TGAGGCGACCACTTCAAATG+CGG 0.651913 1_3:-28280048 Msa0112770:CDS
GTAATGGGTCAGAAGCGGAA+AGG 0.654267 1_3:-28287136 Msa0112770:CDS
TCTTCTAGTGAAGATGATGA+TGG 0.654306 1_3:-28284788 Msa0112770:CDS
CCAGATTGACTCGAATGGGT+TGG 0.666324 1_3:+28287177 None:intergenic
GAAGATGATGATGAAACTGA+TGG 0.670632 1_3:-28286688 Msa0112770:intron
CGACAGAGAAGGAATCGCCA+AGG 0.671556 1_3:+28284879 None:intergenic
TCGAGTCAATCTGGTCACGT+AGG 0.674124 1_3:-28287168 Msa0112770:CDS
TTTGAAGGAGAGAAACACAA+TGG 0.680469 1_3:-28279460 Msa0112770:three_prime_UTR
ATTCATCCTTCTAAACACCA+AGG 0.684668 1_3:-28279345 Msa0112770:three_prime_UTR
TCATGGTATGCAGAGTCCAG+GGG 0.687360 1_3:-28286361 Msa0112770:CDS
AGAAGACGAAGATGATGACG+AGG 0.695063 1_3:-28284600 Msa0112770:CDS
ATACCATGAGCATTATGACG+CGG 0.702783 1_3:+28286375 None:intergenic
AAGGAGATACCAAAAGAATG+GGG 0.729442 1_3:-28287117 Msa0112770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAATAAAAAAAAA+AGG + chr1_3:28284277-28284296 None:intergenic 0.0%
!! AAGAAAAAAAAAAAAAAACA+GGG + chr1_3:28282711-28282730 None:intergenic 10.0%
!! AAAGAAAAAAAAAAAAAAAC+AGG + chr1_3:28282712-28282731 None:intergenic 10.0%
!!! TTTTTTTTTTTTCTTTTTCT+AGG - chr1_3:28282716-28282735 Msa0112770:intron 10.0%
!!! AACTTGTTTTAATTAATTTT+AGG + chr1_3:28282826-28282845 None:intergenic 10.0%
!!! TTTACTTTTGAATTTTTTAT+AGG - chr1_3:28283689-28283708 Msa0112770:intron 10.0%
!!! TTTTATAATATACATAGTAT+AGG + chr1_3:28284981-28285000 None:intergenic 10.0%
!!! AAATTTTAGAATATTAAATC+GGG - chr1_3:28285236-28285255 Msa0112770:intron 10.0%
!! TAAACATAATATTAATGATA+TGG - chr1_3:28285317-28285336 Msa0112770:intron 10.0%
!! AAAATGCAAAAATAAAGAAA+TGG + chr1_3:28279175-28279194 None:intergenic 15.0%
!!! ATTAATTCACAAAATTTTCA+AGG + chr1_3:28279764-28279783 None:intergenic 15.0%
!! AAGTTAATTATCAAATTATC+AGG + chr1_3:28280047-28280066 None:intergenic 15.0%
!!! TGATAATTTGATAATTAACT+TGG - chr1_3:28280046-28280065 Msa0112770:CDS 15.0%
!! TAATATAACAGTTAAAACTT+GGG + chr1_3:28282465-28282484 None:intergenic 15.0%
!! TTAATATAACAGTTAAAACT+TGG + chr1_3:28282466-28282485 None:intergenic 15.0%
!!! TGTTATATTAAACTTTTATG+TGG - chr1_3:28282475-28282494 Msa0112770:intron 15.0%
!! AGAAAAAAAAAAAAAAACAG+GGG + chr1_3:28282710-28282729 None:intergenic 15.0%
!!! AATGTTTTCTTGTATTTTAT+TGG + chr1_3:28282764-28282783 None:intergenic 15.0%
!! AATTTGAACAAAAAACTTAA+AGG + chr1_3:28283764-28283783 None:intergenic 15.0%
!!! TTTAAGTTTTTTGTTCAAAT+TGG - chr1_3:28283763-28283782 Msa0112770:intron 15.0%
!! TTTGTAACAAAAAAACTTAA+AGG - chr1_3:28284202-28284221 Msa0112770:intron 15.0%
!! TATAGATTTACATAAAGAAT+TGG + chr1_3:28284373-28284392 None:intergenic 15.0%
!! AAAGTTTGAATAAATACTAT+TGG + chr1_3:28284597-28284616 None:intergenic 15.0%
!! TGTTTGTATTTATTTATGTA+TGG - chr1_3:28284741-28284760 Msa0112770:CDS 15.0%
!!! TTCATCCTTTTTTTTTTTTA+CGG + chr1_3:28285579-28285598 None:intergenic 15.0%
!!! AAAACTTTTCTCTTATATTT+AGG - chr1_3:28287409-28287428 Msa0112770:five_prime_UTR 15.0%
!! AACTAAAGAAGAAAGAATTA+GGG + chr1_3:28279215-28279234 None:intergenic 20.0%
!! AAACTAAAGAAGAAAGAATT+AGG + chr1_3:28279216-28279235 None:intergenic 20.0%
!! AATTCTTCTATCAATAAACT+CGG + chr1_3:28279588-28279607 None:intergenic 20.0%
!! TACCTAATATAACATGTTAA+TGG - chr1_3:28279968-28279987 Msa0112770:intron 20.0%
!! AACCATTAACATGTTATATT+AGG + chr1_3:28279973-28279992 None:intergenic 20.0%
!! TAAAACAAACAGTATAAACA+TGG + chr1_3:28280101-28280120 None:intergenic 20.0%
!! CATTTGTGAAAAGTTTAAAA+AGG + chr1_3:28280561-28280580 None:intergenic 20.0%
!! CTTATAAAAAGAAGATATCA+GGG + chr1_3:28281034-28281053 None:intergenic 20.0%
!! TCTTATAAAAAGAAGATATC+AGG + chr1_3:28281035-28281054 None:intergenic 20.0%
!! ATCCATAATTTCAGAAAAAA+CGG - chr1_3:28281606-28281625 Msa0112770:intron 20.0%
!! AAATTGAGAGAAAAAAGAAT+TGG - chr1_3:28282648-28282667 Msa0112770:intron 20.0%
!!! AATTTTAGGTGCTATATAAT+GGG + chr1_3:28282812-28282831 None:intergenic 20.0%
!!! TAATTTTAGGTGCTATATAA+TGG + chr1_3:28282813-28282832 None:intergenic 20.0%
!! TGATATAATCTAGTTAATAG+AGG - chr1_3:28282860-28282879 Msa0112770:intron 20.0%
!!! GTTTAATTTGAAAAAGTTCA+TGG - chr1_3:28282913-28282932 Msa0112770:intron 20.0%
!! AAGTTCCTCATAAAATATTT+AGG + chr1_3:28283075-28283094 None:intergenic 20.0%
!! AATACCTGAAAAGATAAATA+CGG + chr1_3:28283139-28283158 None:intergenic 20.0%
!!! TTATCTTTTCAGGTATTTTA+TGG - chr1_3:28283142-28283161 Msa0112770:CDS 20.0%
!! ATAGTTCTTGATAAAAGTTA+AGG + chr1_3:28283387-28283406 None:intergenic 20.0%
!!! TTTTATCAAGAACTATGAAT+TGG - chr1_3:28283391-28283410 Msa0112770:CDS 20.0%
!! AAAAAACTTAAAGGACTTAT+TGG + chr1_3:28283755-28283774 None:intergenic 20.0%
!! GTAAGTAATCATGTTTAATA+AGG + chr1_3:28283927-28283946 None:intergenic 20.0%
!!! CAGATATTTTATGACTTAAA+AGG - chr1_3:28284174-28284193 Msa0112770:intron 20.0%
!! GTTATAAACATCTAACTTAA+AGG - chr1_3:28284233-28284252 Msa0112770:intron 20.0%
!!! CTTTCTAAGATCTTTTTTAT+TGG - chr1_3:28284436-28284455 Msa0112770:CDS 20.0%
!! AGAAACTAATTACTGAAAAA+GGG - chr1_3:28285177-28285196 Msa0112770:intron 20.0%
!! TGATGAATATCAAACTAATT+TGG - chr1_3:28285289-28285308 Msa0112770:intron 20.0%
!!! AGTTAATTAGGTTGTATATT+TGG + chr1_3:28285516-28285535 None:intergenic 20.0%
!! ATATCTTATCTGTATTTCAA+GGG + chr1_3:28285696-28285715 None:intergenic 20.0%
!! AATATCTTATCTGTATTTCA+AGG + chr1_3:28285697-28285716 None:intergenic 20.0%
!! GATATATAATATCATGCATA+TGG - chr1_3:28285827-28285846 Msa0112770:intron 20.0%
!!! AAACATTTTTCTTGCAAAAA+AGG + chr1_3:28286084-28286103 None:intergenic 20.0%
!! GCTATGATAACAAATATAAA+TGG + chr1_3:28286206-28286225 None:intergenic 20.0%
!! AAATTGGTGAAAATATTTCT+GGG + chr1_3:28286427-28286446 None:intergenic 20.0%
!! AAAATTGGTGAAAATATTTC+TGG + chr1_3:28286428-28286447 None:intergenic 20.0%
!! TGAATAAATGTTAAAACTTG+TGG - chr1_3:28287017-28287036 Msa0112770:CDS 20.0%
!! GAATAAATGTTAAAACTTGT+GGG - chr1_3:28287018-28287037 Msa0112770:CDS 20.0%
!! AATAAATGTTAAAACTTGTG+GGG - chr1_3:28287019-28287038 Msa0112770:CDS 20.0%
!! AGAATGTTCTCTTATATTTA+GGG + chr1_3:28287310-28287329 None:intergenic 20.0%
!! AAGAATGTTCTCTTATATTT+AGG + chr1_3:28287311-28287330 None:intergenic 20.0%
! GAGTTTATTGATAGAAGAAT+TGG - chr1_3:28279587-28279606 Msa0112770:three_prime_UTR 25.0%
!! TTAATGGTTTATTTGCTGAT+TGG - chr1_3:28279984-28280003 Msa0112770:intron 25.0%
! TTTGAACTCTAATTAGCTAT+TGG - chr1_3:28280018-28280037 Msa0112770:CDS 25.0%
!! TTTTGCAGATATTTCAGATT+TGG - chr1_3:28280206-28280225 Msa0112770:CDS 25.0%
! TTTGCAGATATTTCAGATTT+GGG - chr1_3:28280207-28280226 Msa0112770:CDS 25.0%
! ATATTCCAACTTTCTCTTTA+TGG - chr1_3:28281062-28281081 Msa0112770:intron 25.0%
! TGAAGAAACTATGACTAAAA+AGG - chr1_3:28281751-28281770 Msa0112770:intron 25.0%
! GAAGAAACTATGACTAAAAA+GGG - chr1_3:28281752-28281771 Msa0112770:intron 25.0%
!! AGAATACTACTTTGAAAGAT+TGG - chr1_3:28281915-28281934 Msa0112770:intron 25.0%
!! GAATACTACTTTGAAAGATT+GGG - chr1_3:28281916-28281935 Msa0112770:intron 25.0%
! ACACTATCTTAATCATCAAT+CGG - chr1_3:28282263-28282282 Msa0112770:intron 25.0%
!! TATTCCATTTACAATTTTGC+TGG - chr1_3:28282556-28282575 Msa0112770:intron 25.0%
! AAAGAATTGGTCAACATATA+TGG - chr1_3:28282661-28282680 Msa0112770:intron 25.0%
!!! ATTTTATTGGTTGTTAAGCA+GGG + chr1_3:28282751-28282770 None:intergenic 25.0%
!!! TATTTTATTGGTTGTTAAGC+AGG + chr1_3:28282752-28282771 None:intergenic 25.0%
! ATAATCTAGTTAATAGAGGT+TGG - chr1_3:28282864-28282883 Msa0112770:intron 25.0%
! TTTGCAATACTCAGATTTAA+TGG - chr1_3:28283003-28283022 Msa0112770:intron 25.0%
!! CTGTTCCTAAATATTTTATG+AGG - chr1_3:28283067-28283086 Msa0112770:CDS 25.0%
!! ATAACCGTATTTATCTTTTC+AGG - chr1_3:28283132-28283151 Msa0112770:CDS 25.0%
! GTTATAAACGTCTAACTTAA+AGG + chr1_3:28283733-28283752 None:intergenic 25.0%
! TGTAACAGAAAAAAACTTAC+AGG + chr1_3:28283790-28283809 None:intergenic 25.0%
!! ACAAAGTTGGTTGAAAAAAT+GGG + chr1_3:28283850-28283869 None:intergenic 25.0%
!! AACAAAGTTGGTTGAAAAAA+TGG + chr1_3:28283851-28283870 None:intergenic 25.0%
! TCATGGATCATTTAACATTA+AGG - chr1_3:28283880-28283899 Msa0112770:intron 25.0%
! GATTTACATAAAGAATTGGA+AGG + chr1_3:28284369-28284388 None:intergenic 25.0%
!!! TGAATAAATACTATTGGTTC+AGG + chr1_3:28284591-28284610 None:intergenic 25.0%
! TGATATATGTTTACTTTCAG+TGG + chr1_3:28284631-28284650 None:intergenic 25.0%
!! CATTTTCTTGTATATTCTAC+TGG - chr1_3:28284913-28284932 Msa0112770:CDS 25.0%
! ACTAACGAAAAAGATAAAAG+GGG + chr1_3:28284941-28284960 None:intergenic 25.0%
! CACTAACGAAAAAGATAAAA+GGG + chr1_3:28284942-28284961 None:intergenic 25.0%
! ACACTAACGAAAAAGATAAA+AGG + chr1_3:28284943-28284962 None:intergenic 25.0%
!! GAAAAAGAAAATGCTGTTTA+CGG - chr1_3:28285018-28285037 Msa0112770:intron 25.0%
! GAGAAACTAATTACTGAAAA+AGG - chr1_3:28285176-28285195 Msa0112770:intron 25.0%
! GAAACTAATTACTGAAAAAG+GGG - chr1_3:28285178-28285197 Msa0112770:intron 25.0%
!!! ATTAAATCGGGTTAGTTTTT+TGG - chr1_3:28285248-28285267 Msa0112770:intron 25.0%
! ATATTAATGATATGGACTTC+TGG - chr1_3:28285325-28285344 Msa0112770:intron 25.0%
!!! TAATGAAACACAATTTGTTG+GGG + chr1_3:28285543-28285562 None:intergenic 25.0%
!! GTAATGAAACACAATTTGTT+GGG + chr1_3:28285544-28285563 None:intergenic 25.0%
! TGTAATGAAACACAATTTGT+TGG + chr1_3:28285545-28285564 None:intergenic 25.0%
! GATGTCCGTAAAAAAAAAAA+AGG - chr1_3:28285571-28285590 Msa0112770:intron 25.0%
! TGTTTCATAAAACCTTTCAT+TGG - chr1_3:28285607-28285626 Msa0112770:intron 25.0%
! TTCAAAACAACATTAAAGGT+AGG + chr1_3:28285649-28285668 None:intergenic 25.0%
! ACGTTTCAAAACAACATTAA+AGG + chr1_3:28285653-28285672 None:intergenic 25.0%
! CATGATATTATATATCATGC+AGG + chr1_3:28285823-28285842 None:intergenic 25.0%
! CAAAAAAGGTGGTAATAAAT+TGG + chr1_3:28286070-28286089 None:intergenic 25.0%
! AGATTGACTACAAAATATCA+TGG + chr1_3:28286110-28286129 None:intergenic 25.0%
! TGATAACAAATATAAATGGC+AGG + chr1_3:28286202-28286221 None:intergenic 25.0%
! CTATGATCTTATAACTGATA+TGG - chr1_3:28286225-28286244 Msa0112770:intron 25.0%
!!! GAAATGTTTTTCAAATACTG+TGG - chr1_3:28286290-28286309 Msa0112770:intron 25.0%
!!! AATTATGCTTTTTCGATTAC+AGG - chr1_3:28286330-28286349 Msa0112770:CDS 25.0%
!!! ATTATGCTTTTTCGATTACA+GGG - chr1_3:28286331-28286350 Msa0112770:CDS 25.0%
! TCAAGTAGTAATCTCAAAAT+TGG + chr1_3:28286443-28286462 None:intergenic 25.0%
! AAAATATGCCAAATGCATTA+CGG - chr1_3:28286477-28286496 Msa0112770:intron 25.0%
! TTAGGATTCAGTAATTTGAT+TGG + chr1_3:28286599-28286618 None:intergenic 25.0%
! CATATTACCAAATTGAAACA+TGG + chr1_3:28286651-28286670 None:intergenic 25.0%
! AAGAAAAAAATTGAAGAGAG+AGG - chr1_3:28286790-28286809 Msa0112770:CDS 25.0%
!!! CGTTTTTTGAATACTAATGT+TGG - chr1_3:28287081-28287100 Msa0112770:CDS 25.0%
!!! TAAGAGAACATTCTTTTTTC+AGG - chr1_3:28287316-28287335 Msa0112770:exon 25.0%
AAGAAGAACAACAACAAGAT+GGG - chr1_3:28279362-28279381 Msa0112770:three_prime_UTR 30.0%
!! TTTTTGAGCTTTTGCTTTCA+TGG + chr1_3:28279402-28279421 None:intergenic 30.0%
AAAGGAGATACCAAAAGAAT+GGG - chr1_3:28279488-28279507 Msa0112770:three_prime_UTR 30.0%
AGAATTGGTGAAAATGATGA+AGG - chr1_3:28279602-28279621 Msa0112770:exon 30.0%
! TAGCTTTACCAAAATCATCA+AGG + chr1_3:28279628-28279647 None:intergenic 30.0%
! TTTTCAGAAACAGTTGTCAA+TGG + chr1_3:28279706-28279725 None:intergenic 30.0%
GATGAATTTGAAGGAATTGA+TGG - chr1_3:28279858-28279877 Msa0112770:CDS 30.0%
! TTTATTTGCTGATTGGAACT+TGG - chr1_3:28279991-28280010 Msa0112770:intron 30.0%
ATTTCTGTTTCAGTGACTAT+AGG - chr1_3:28280513-28280532 Msa0112770:intron 30.0%
TTTCTGTTTCAGTGACTATA+GGG - chr1_3:28280514-28280533 Msa0112770:intron 30.0%
! TGCAAAAAGCAAGTTTTACA+AGG - chr1_3:28280673-28280692 Msa0112770:CDS 30.0%
TGTGCGATATTTCTTAAATC+AGG - chr1_3:28280696-28280715 Msa0112770:intron 30.0%
GTGCGATATTTCTTAAATCA+GGG - chr1_3:28280697-28280716 Msa0112770:intron 30.0%
! CTTTCACTCTAATATTTTCC+AGG - chr1_3:28280764-28280783 Msa0112770:intron 30.0%
TTCAAAGCTTTCATCTTGTT+TGG + chr1_3:28280894-28280913 None:intergenic 30.0%
! AAACAAGATGAAAGCTTTGA+AGG - chr1_3:28280893-28280912 Msa0112770:intron 30.0%
GACAATGAATAATTCTGTTC+AGG - chr1_3:28280977-28280996 Msa0112770:intron 30.0%
!!! ATGGTTTAGATGACTTGTTT+TGG - chr1_3:28281347-28281366 Msa0112770:intron 30.0%
!!! TGCCGTTTTTTCTGAAATTA+TGG + chr1_3:28281611-28281630 None:intergenic 30.0%
AAACTATGACTAAAAAGGGT+TGG - chr1_3:28281756-28281775 Msa0112770:intron 30.0%
AACTATGACTAAAAAGGGTT+GGG - chr1_3:28281757-28281776 Msa0112770:intron 30.0%
AAGGTAAAAGGATTGAATGT+TGG - chr1_3:28282055-28282074 Msa0112770:intron 30.0%
AGGTAAAAGGATTGAATGTT+GGG - chr1_3:28282056-28282075 Msa0112770:intron 30.0%
TTCGGAGCTTCAATTATATA+AGG + chr1_3:28282196-28282215 None:intergenic 30.0%
CATAATTCTTCAAAGGTCTT+CGG + chr1_3:28282214-28282233 None:intergenic 30.0%
CAGTGAACATAATTCTTCAA+AGG + chr1_3:28282221-28282240 None:intergenic 30.0%
! CTTTGAAGAATTATGTTCAC+TGG - chr1_3:28282219-28282238 Msa0112770:intron 30.0%
TCTTAATCATCAATCGGATT+CGG - chr1_3:28282269-28282288 Msa0112770:intron 30.0%
! CAATTTCTACAAGTCTTGTA+GGG + chr1_3:28282634-28282653 None:intergenic 30.0%
! TCAATTTCTACAAGTCTTGT+AGG + chr1_3:28282635-28282654 None:intergenic 30.0%
!! TTTTATTGGTTGTTAAGCAG+GGG + chr1_3:28282750-28282769 None:intergenic 30.0%
! TAAATCTGAGTATTGCAAAC+TGG + chr1_3:28283002-28283021 None:intergenic 30.0%
!! AATGGACTAATTTGCTTAGT+TGG - chr1_3:28283021-28283040 Msa0112770:CDS 30.0%
!!! ATTGCAGTATTTTGCTGTTT+TGG - chr1_3:28283171-28283190 Msa0112770:intron 30.0%
! CATAACTGGATGTCTAAAAT+CGG + chr1_3:28283532-28283551 None:intergenic 30.0%
AGAACATAAGAAAGAACCAA+CGG + chr1_3:28283622-28283641 None:intergenic 30.0%
TGAGCACTATTTAACAAAGT+TGG + chr1_3:28283863-28283882 None:intergenic 30.0%
ACTTTGTTAAATAGTGCTCA+TGG - chr1_3:28283863-28283882 Msa0112770:intron 30.0%
TGGATCATTTAACATTAAGG+TGG - chr1_3:28283883-28283902 Msa0112770:intron 30.0%
TCATTTAACATTAAGGTGGT+AGG - chr1_3:28283887-28283906 Msa0112770:intron 30.0%
GTGGACATTTAATCTTAAGT+TGG + chr1_3:28284110-28284129 None:intergenic 30.0%
GTTATCACCATTCATCAATA+AGG - chr1_3:28284299-28284318 Msa0112770:CDS 30.0%
ATCAGATCCTTATTGATGAA+TGG + chr1_3:28284309-28284328 None:intergenic 30.0%
TGATTTCTACCATGAAAAAG+TGG - chr1_3:28284340-28284359 Msa0112770:CDS 30.0%
TTATATTCATTGTGTGAGCA+AGG + chr1_3:28284534-28284553 None:intergenic 30.0%
ACACAATGAATATAAAACGC+AGG - chr1_3:28284539-28284558 Msa0112770:CDS 30.0%
TATATCATGCGAAAATTCTC+AGG - chr1_3:28284644-28284663 Msa0112770:CDS 30.0%
TAAATACAAACATATGCGCA+TGG + chr1_3:28284733-28284752 None:intergenic 30.0%
! ACAGCATTTTCTTTTTCTAC+TGG + chr1_3:28285015-28285034 None:intergenic 30.0%
ATAATTTCCATTAGAGACGT+AGG + chr1_3:28285150-28285169 None:intergenic 30.0%
CTCTAATGGAAATTATGCTA+AGG - chr1_3:28285154-28285173 Msa0112770:intron 30.0%
!! AGTTGATTCAACTTTTCTTG+TGG - chr1_3:28285418-28285437 Msa0112770:CDS 30.0%
TAATATTAAGTGCGAGATCT+TGG + chr1_3:28285482-28285501 None:intergenic 30.0%
TGTTGGGGTAAAAGTTAATT+AGG + chr1_3:28285528-28285547 None:intergenic 30.0%
!! ACTGTTTTTCATCCAATGAA+AGG + chr1_3:28285622-28285641 None:intergenic 30.0%
TTTCATTGGATGAAAAACAG+TGG - chr1_3:28285621-28285640 Msa0112770:intron 30.0%
!!! AGAGTTTTTTGTGAACTTGA+AGG + chr1_3:28285747-28285766 None:intergenic 30.0%
ATTATCCAACCATAACATTC+TGG + chr1_3:28285873-28285892 None:intergenic 30.0%
GTTCCATAAGATGATATAAC+TGG + chr1_3:28285921-28285940 None:intergenic 30.0%
! CATTTTTCTTGCAAAAAAGG+TGG + chr1_3:28286081-28286100 None:intergenic 30.0%
TTGAACAAAGAAAATAGCAG+CGG - chr1_3:28286142-28286161 Msa0112770:intron 30.0%
AAATATGCCAAATGCATTAC+GGG - chr1_3:28286478-28286497 Msa0112770:intron 30.0%
! ATTTTATCCCGTAATGCATT+TGG + chr1_3:28286488-28286507 None:intergenic 30.0%
ACGGGATAAAATTAAAGATG+TGG - chr1_3:28286496-28286515 Msa0112770:intron 30.0%
TTCAGTAATTTGATTGGAAC+TGG + chr1_3:28286593-28286612 None:intergenic 30.0%
ATTACTGAATCCTAAGTTTG+AGG - chr1_3:28286604-28286623 Msa0112770:intron 30.0%
!! ACTTACTTTTCCTCAAACTT+AGG + chr1_3:28286617-28286636 None:intergenic 30.0%
ATTGAAACATGGAAAACAGA+AGG + chr1_3:28286640-28286659 None:intergenic 30.0%
! CTGTTTTCCATGTTTCAATT+TGG - chr1_3:28286641-28286660 Msa0112770:intron 30.0%
TTGATGTGAAGGAAAAAGAA+AGG - chr1_3:28286870-28286889 Msa0112770:intron 30.0%
GGAAAAAGAAAGGTCTTTAA+TGG - chr1_3:28286880-28286899 Msa0112770:intron 30.0%
TCTCCTTCAAATAATATGTG+GGG + chr1_3:28287137-28287156 None:intergenic 30.0%
CTCTCCTTCAAATAATATGT+GGG + chr1_3:28287138-28287157 None:intergenic 30.0%
TCTCTCCTTCAAATAATATG+TGG + chr1_3:28287139-28287158 None:intergenic 30.0%
GATAGTCACTTACAAAGTAA+TGG + chr1_3:28287173-28287192 None:intergenic 30.0%
TTTCAACTTTAGTTAGTCAC+TGG - chr1_3:28287218-28287237 Msa0112770:CDS 30.0%
! TTCTCTTATATTTAGGACCA+CGG - chr1_3:28287416-28287435 Msa0112770:five_prime_UTR 30.0%
GAAGAAGAACAACAACAAGA+TGG - chr1_3:28279361-28279380 Msa0112770:three_prime_UTR 35.0%
GAAAGGAGATACCAAAAGAA+TGG - chr1_3:28279487-28279506 Msa0112770:three_prime_UTR 35.0%
AAGGAGATACCAAAAGAATG+GGG - chr1_3:28279489-28279508 Msa0112770:three_prime_UTR 35.0%
ATCAATAAACTCGGACGATT+TGG + chr1_3:28279579-28279598 None:intergenic 35.0%
! GACGATGATGATGAATTTGA+AGG - chr1_3:28279849-28279868 Msa0112770:CDS 35.0%
! TTTGAAGGAATTGATGGTCT+TGG - chr1_3:28279864-28279883 Msa0112770:CDS 35.0%
! ACTTTGAAGATGAGATGCTT+CGG - chr1_3:28279895-28279914 Msa0112770:intron 35.0%
! GAAGATGATGATGAAACTGA+TGG - chr1_3:28279918-28279937 Msa0112770:intron 35.0%
CGTCACAAAAATAACACAAC+AGG + chr1_3:28280166-28280185 None:intergenic 35.0%
!! TAGATTACAGAAAGCACTCA+TGG + chr1_3:28280339-28280358 None:intergenic 35.0%
TCTCTCTTATGCCAATTTGA+GGG + chr1_3:28280406-28280425 None:intergenic 35.0%
TTCTCTCTTATGCCAATTTG+AGG + chr1_3:28280407-28280426 None:intergenic 35.0%
GTCACTGAAACAGAAATAAC+TGG + chr1_3:28280510-28280529 None:intergenic 35.0%
!!! TTTCTTTTGCTTTTTCAGCC+TGG + chr1_3:28280785-28280804 None:intergenic 35.0%
GGCTGAAAAAGCAAAAGAAA+AGG - chr1_3:28280785-28280804 Msa0112770:intron 35.0%
! AAGATAGCTTGTCTGCTAAA+CGG - chr1_3:28280955-28280974 Msa0112770:intron 35.0%
GTACCATTATTTATCCTCGA+GGG - chr1_3:28280999-28281018 Msa0112770:intron 35.0%
!! ACAAGTTGGTCATATTCATC+TGG + chr1_3:28281097-28281116 None:intergenic 35.0%
GATTAACTGATCTCCAATCT+TGG - chr1_3:28281299-28281318 Msa0112770:intron 35.0%
CTCAGATATACAACCAAGAT+TGG + chr1_3:28281315-28281334 None:intergenic 35.0%
!!! ATCTGAGCTTCGTTTTAAGA+TGG - chr1_3:28281328-28281347 Msa0112770:intron 35.0%
TTTGGCCAAAGTGTATAAAC+AGG - chr1_3:28281365-28281384 Msa0112770:intron 35.0%
TTGGCCAAAGTGTATAAACA+GGG - chr1_3:28281366-28281385 Msa0112770:intron 35.0%
TCATCCCTGTTTATACACTT+TGG + chr1_3:28281373-28281392 None:intergenic 35.0%
! GCATTAAGCTAGGTAGTTTT+GGG + chr1_3:28281397-28281416 None:intergenic 35.0%
! TGCATTAAGCTAGGTAGTTT+TGG + chr1_3:28281398-28281417 None:intergenic 35.0%
AAAACTACCTAGCTTAATGC+AGG - chr1_3:28281397-28281416 Msa0112770:intron 35.0%
! TTGGTGATAGTCATGGAAAT+GGG - chr1_3:28281516-28281535 Msa0112770:intron 35.0%
! GATCTTGGTTTCTCTTTTGA+TGG + chr1_3:28281692-28281711 None:intergenic 35.0%
TCTTCTAGTGAAGATGATGA+TGG - chr1_3:28281818-28281837 Msa0112770:intron 35.0%
TGGTGAAGATTCTGATGATT+CGG - chr1_3:28281838-28281857 Msa0112770:intron 35.0%
! AAGATTCTGATGATTCGGAA+AGG - chr1_3:28281843-28281862 Msa0112770:intron 35.0%
! GATGATGATGATATCAGTTC+AGG - chr1_3:28281947-28281966 Msa0112770:intron 35.0%
!! GCAGAAGTTGATAAGGTAAA+AGG - chr1_3:28282043-28282062 Msa0112770:CDS 35.0%
GCAAAGAGAAATGATTCTGT+TGG - chr1_3:28282091-28282110 Msa0112770:intron 35.0%
TGATTCTGTTGGATGTGTAA+AGG - chr1_3:28282102-28282121 Msa0112770:intron 35.0%
GATTCTGTTGGATGTGTAAA+GGG - chr1_3:28282103-28282122 Msa0112770:intron 35.0%
AGGAAAAATGTCGAAAGAGT+TGG - chr1_3:28282165-28282184 Msa0112770:intron 35.0%
TGAAGAATTATGTTCACTGG+TGG - chr1_3:28282222-28282241 Msa0112770:intron 35.0%
!!! TGTTTTGATCCATATCTCCT+TGG - chr1_3:28282369-28282388 Msa0112770:intron 35.0%
AAACATGAATACAAGCACCA+AGG + chr1_3:28282389-28282408 None:intergenic 35.0%
AGCACCAGCAAAATTGTAAA+TGG + chr1_3:28282563-28282582 None:intergenic 35.0%
GTGCTACAATTATTCCCTAT+AGG - chr1_3:28282578-28282597 Msa0112770:intron 35.0%
ACAGTAATCAGTCTCCTATA+GGG + chr1_3:28282595-28282614 None:intergenic 35.0%
AACAGTAATCAGTCTCCTAT+AGG + chr1_3:28282596-28282615 None:intergenic 35.0%
ATATATGGTACACAGCTAAC+AGG - chr1_3:28282676-28282695 Msa0112770:intron 35.0%
TATATGGTACACAGCTAACA+GGG - chr1_3:28282677-28282696 Msa0112770:intron 35.0%
GTTGTCATTGATGTATTGCA+TGG - chr1_3:28282891-28282910 Msa0112770:intron 35.0%
AAAAGAATGCAAACAACCAC+AGG + chr1_3:28282968-28282987 None:intergenic 35.0%
! TGAGTATTGCAAACTGGATT+GGG + chr1_3:28282996-28283015 None:intergenic 35.0%
ACCATTGATAGAGATGAGTA+CGG - chr1_3:28283240-28283259 Msa0112770:intron 35.0%
CACATATTGCAGCAAAGTAT+GGG + chr1_3:28283270-28283289 None:intergenic 35.0%
! GTTGAGAGTATAAAAAACGC+AGG - chr1_3:28283325-28283344 Msa0112770:CDS 35.0%
GATAAAAGTTAAGGCAGAGA+CGG + chr1_3:28283378-28283397 None:intergenic 35.0%
!! CACATGCACACTTTTTAACT+GGG - chr1_3:28284127-28284146 Msa0112770:intron 35.0%
CTACTAATGAATTTAGCCTC+TGG - chr1_3:28284407-28284426 Msa0112770:CDS 35.0%
CAACGAAAAACATAGGTCAA+AGG + chr1_3:28284497-28284516 None:intergenic 35.0%
! TGACCTATGTTTTTCGTTGA+TGG - chr1_3:28284498-28284517 Msa0112770:CDS 35.0%
ATGCCATCAACGAAAAACAT+AGG + chr1_3:28284504-28284523 None:intergenic 35.0%
TCATCTCATCCAACTAAGTT+TGG + chr1_3:28284804-28284823 None:intergenic 35.0%
AATGATTAGCACTAGGGTTA+AGG + chr1_3:28284852-28284871 None:intergenic 35.0%
GACAACAATGATTAGCACTA+GGG + chr1_3:28284858-28284877 None:intergenic 35.0%
ATCATTGTTGTCGAACAAAC+TGG - chr1_3:28284866-28284885 Msa0112770:CDS 35.0%
GTTTACGGAAGCAAATAATG+AGG - chr1_3:28285033-28285052 Msa0112770:intron 35.0%
! AAAGGTGCATTGTCTTATGT+GGG - chr1_3:28285056-28285075 Msa0112770:intron 35.0%
!!! CGGGTTAGTTTTTTGGAATT+TGG - chr1_3:28285255-28285274 Msa0112770:intron 35.0%
TCTTCGCTTTCTTGTATTTG+AGG - chr1_3:28285764-28285783 Msa0112770:CDS 35.0%
CTGGCAGAAAACAAACAATA+TGG + chr1_3:28285902-28285921 None:intergenic 35.0%
CTGCCAGTTATATCATCTTA+TGG - chr1_3:28285915-28285934 Msa0112770:intron 35.0%
AAACTGTCAGTAGTGAAGAA+TGG + chr1_3:28286039-28286058 None:intergenic 35.0%
TGAACAAAGAAAATAGCAGC+GGG - chr1_3:28286143-28286162 Msa0112770:intron 35.0%
!! GGCATTGATATATCCTTGTA+GGG + chr1_3:28286384-28286403 None:intergenic 35.0%
!! AGGCATTGATATATCCTTGT+AGG + chr1_3:28286385-28286404 None:intergenic 35.0%
GAACGAACTCAAGTTATCAT+AGG + chr1_3:28286405-28286424 None:intergenic 35.0%
!! TGAGCTGATTAAGTTGAAAG+TGG - chr1_3:28286520-28286539 Msa0112770:intron 35.0%
TGGATGAACATCATACTTTG+AGG - chr1_3:28286540-28286559 Msa0112770:intron 35.0%
!! TTTTGTTTCCGCATTTGAAG+TGG + chr1_3:28286569-28286588 None:intergenic 35.0%
TTCTTGATGCAGCTATGTTA+AGG - chr1_3:28286733-28286752 Msa0112770:CDS 35.0%
TCTTGATGCAGCTATGTTAA+GGG - chr1_3:28286734-28286753 Msa0112770:CDS 35.0%
AAAAATTGAAGAGAGAGGTG+AGG - chr1_3:28286795-28286814 Msa0112770:CDS 35.0%
CAAGAACATGCTTTCAAATC+TGG - chr1_3:28286953-28286972 Msa0112770:intron 35.0%
AAATCTGGACAACTAGGAAA+AGG - chr1_3:28286968-28286987 Msa0112770:CDS 35.0%
AATCTGGACAACTAGGAAAA+GGG - chr1_3:28286969-28286988 Msa0112770:CDS 35.0%
GATCCCCACATATTATTTGA+AGG - chr1_3:28287131-28287150 Msa0112770:CDS 35.0%
TTTGAAGGAGAGAAACACAA+TGG - chr1_3:28287146-28287165 Msa0112770:CDS 35.0%
TCATATTCTCAAGAACGAAC+TGG + chr1_3:28287195-28287214 None:intergenic 35.0%
ATTCATCCTTCTAAACACCA+AGG - chr1_3:28287261-28287280 Msa0112770:CDS 35.0%
!! AAACATCCTTGGTGTTTAGA+AGG + chr1_3:28287270-28287289 None:intergenic 35.0%
AACAGACACATAAACATCCT+TGG + chr1_3:28287281-28287300 None:intergenic 35.0%
! TCTCTTATATTTAGGACCAC+GGG - chr1_3:28287417-28287436 Msa0112770:five_prime_UTR 35.0%
!!! TTCTTGGGTTTGGTTTTGAG+CGG + chr1_3:28279286-28279305 None:intergenic 40.0%
CTCAAAACCAAACCCAAGAA+TGG - chr1_3:28279286-28279305 Msa0112770:intron 40.0%
TCGATGATTTCGCCATTCTT+GGG + chr1_3:28279301-28279320 None:intergenic 40.0%
TTCGATGATTTCGCCATTCT+TGG + chr1_3:28279302-28279321 None:intergenic 40.0%
GTTCTTCTTCTTCTTCTTGC+TGG + chr1_3:28279351-28279370 None:intergenic 40.0%
ACGTAGGAAGTTCGAAGTAA+TGG - chr1_3:28279454-28279473 Msa0112770:three_prime_UTR 40.0%
CGTAGGAAGTTCGAAGTAAT+GGG - chr1_3:28279455-28279474 Msa0112770:three_prime_UTR 40.0%
AGATACCAAAAGAATGGGGT+TGG - chr1_3:28279493-28279512 Msa0112770:three_prime_UTR 40.0%
!! GTTCTCTTGCTATTGAGAAG+AGG - chr1_3:28279519-28279538 Msa0112770:intron 40.0%
!! GATGAAGGCCTTGATGATTT+TGG - chr1_3:28279617-28279636 Msa0112770:exon 40.0%
! AAGGAATTGATGGTCTTGGA+AGG - chr1_3:28279868-28279887 Msa0112770:intron 40.0%
! AGGAATTGATGGTCTTGGAA+GGG - chr1_3:28279869-28279888 Msa0112770:intron 40.0%
! CTTTGAAGATGAGATGCTTC+GGG - chr1_3:28279896-28279915 Msa0112770:intron 40.0%
ATACCATGAGCATTATGACG+CGG + chr1_3:28280234-28280253 None:intergenic 40.0%
TTCCCTAAAGTCACAGTAAC+AGG + chr1_3:28280306-28280325 None:intergenic 40.0%
CTAAACTAACCCCCTCAAAT+TGG - chr1_3:28280392-28280411 Msa0112770:intron 40.0%
TCTCTTATGCCAATTTGAGG+GGG + chr1_3:28280404-28280423 None:intergenic 40.0%
CTCTCTTATGCCAATTTGAG+GGG + chr1_3:28280405-28280424 None:intergenic 40.0%
ACTGGTAGATTAACCCACTT+GGG + chr1_3:28280492-28280511 None:intergenic 40.0%
AACTGGTAGATTAACCCACT+TGG + chr1_3:28280493-28280512 None:intergenic 40.0%
!! GCTTTGAAGCTATTTCTGAC+TGG - chr1_3:28280597-28280616 Msa0112770:CDS 40.0%
!!! TCTTGGTTTTATGTCGCTGT+AGG + chr1_3:28280631-28280650 None:intergenic 40.0%
ACAGCGACATAAAACCAAGA+AGG - chr1_3:28280631-28280650 Msa0112770:CDS 40.0%
TTCGTTCATCACTTCCTTCT+TGG + chr1_3:28280648-28280667 None:intergenic 40.0%
AGATAAGGACTTCACTTCTC+TGG - chr1_3:28280836-28280855 Msa0112770:CDS 40.0%
GGTACCATTATTTATCCTCG+AGG - chr1_3:28280998-28281017 Msa0112770:intron 40.0%
GAACCCTCGAGGATAAATAA+TGG + chr1_3:28281005-28281024 None:intergenic 40.0%
TCCAACTTTCTCTTTATGGC+AGG - chr1_3:28281066-28281085 Msa0112770:intron 40.0%
TCCTGCCATAAAGAGAAAGT+TGG + chr1_3:28281070-28281089 None:intergenic 40.0%
TGACCAACTTGTCAGACAAT+TGG - chr1_3:28281105-28281124 Msa0112770:intron 40.0%
GACCAACTTGTCAGACAATT+GGG - chr1_3:28281106-28281125 Msa0112770:intron 40.0%
ATCCCAATTGTCTGACAAGT+TGG + chr1_3:28281111-28281130 None:intergenic 40.0%
CATCAATCCTGCATTAAGCT+AGG + chr1_3:28281407-28281426 None:intergenic 40.0%
TATAGTGTACTAGTGAGCCT+CGG - chr1_3:28281448-28281467 Msa0112770:intron 40.0%
! CTTGGTGATAGTCATGGAAA+TGG - chr1_3:28281515-28281534 Msa0112770:intron 40.0%
! AATTTTACTCCCATGTGCAG+CGG + chr1_3:28281543-28281562 None:intergenic 40.0%
TGCACATGGGAGTAAAATTG+TGG - chr1_3:28281544-28281563 Msa0112770:intron 40.0%
AGTTTCTTCATCGACAGAGA+AGG + chr1_3:28281741-28281760 None:intergenic 40.0%
GATTCTTGAGAGAAGAGATG+AGG - chr1_3:28281787-28281806 Msa0112770:intron 40.0%
AGGTCTGAAGATTCTGATGA+AGG - chr1_3:28281863-28281882 Msa0112770:intron 40.0%
AGATTCTGATGAAGGATCTG+AGG - chr1_3:28281871-28281890 Msa0112770:intron 40.0%
! GATATCAGTTCAGGTTCAGA+AGG - chr1_3:28281956-28281975 Msa0112770:intron 40.0%
GAAGATGATGATATCAGTGC+TGG - chr1_3:28281980-28281999 Msa0112770:CDS 40.0%
!! AAGAGCTGCAGAAGTTGATA+AGG - chr1_3:28282036-28282055 Msa0112770:CDS 40.0%
GGATGTGTAAAGGGAGATAA+TGG - chr1_3:28282112-28282131 Msa0112770:intron 40.0%
GATACCAAGAAGATAGTCGT+TGG - chr1_3:28282142-28282161 Msa0112770:intron 40.0%
! TTTTCTGCAGCAAGTGTGAT+CGG + chr1_3:28282304-28282323 None:intergenic 40.0%
ATACAAGCACCAAGGAGATA+TGG + chr1_3:28282381-28282400 None:intergenic 40.0%
TTCTGGTGTAAAACAGTTGG+TGG + chr1_3:28282419-28282438 None:intergenic 40.0%
CACTTCTGGTGTAAAACAGT+TGG + chr1_3:28282422-28282441 None:intergenic 40.0%
ATATGGTACACAGCTAACAG+GGG - chr1_3:28282678-28282697 Msa0112770:intron 40.0%
! CTGAGTATTGCAAACTGGAT+TGG + chr1_3:28282997-28283016 None:intergenic 40.0%
TCCGTACTCATCTCTATCAA+TGG + chr1_3:28283244-28283263 None:intergenic 40.0%
GCACATATTGCAGCAAAGTA+TGG + chr1_3:28283271-28283290 None:intergenic 40.0%
! AGACATAGCGTCTTTGAAGA+AGG + chr1_3:28283477-28283496 None:intergenic 40.0%
ATCGGAACATGGAAATACCA+TGG + chr1_3:28283514-28283533 None:intergenic 40.0%
! GGATGTCTAAAATCGGAACA+TGG + chr1_3:28283525-28283544 None:intergenic 40.0%
AGTATCACAGGAGTCATAAC+TGG + chr1_3:28283546-28283565 None:intergenic 40.0%
TCGCACATCAATAGTATCAC+AGG + chr1_3:28283558-28283577 None:intergenic 40.0%
TATCACGGCCAGATGTTATT+GGG + chr1_3:28283596-28283615 None:intergenic 40.0%
ATATCACGGCCAGATGTTAT+TGG + chr1_3:28283597-28283616 None:intergenic 40.0%
AAGAACCAACGGCAATATCA+CGG + chr1_3:28283611-28283630 None:intergenic 40.0%
TATAGGCCAAATATCTTCCG+CGG - chr1_3:28283706-28283725 Msa0112770:intron 40.0%
CTCTCAAAACAAGGGTTCAT+AGG + chr1_3:28284070-28284089 None:intergenic 40.0%
ACTCATCGCTCTCAAAACAA+GGG + chr1_3:28284078-28284097 None:intergenic 40.0%
AACTCATCGCTCTCAAAACA+AGG + chr1_3:28284079-28284098 None:intergenic 40.0%
!!! TGTTTTGAGAGCGATGAGTT+TGG - chr1_3:28284079-28284098 Msa0112770:intron 40.0%
! CCAGTTAAAAAGTGTGCATG+TGG + chr1_3:28284129-28284148 None:intergenic 40.0%
!! CCACATGCACACTTTTTAAC+TGG - chr1_3:28284126-28284145 Msa0112770:intron 40.0%
CTAACTTAAAGGACTGCAGA+TGG - chr1_3:28284244-28284263 Msa0112770:intron 40.0%
AAAGGACTGCAGATGGTATT+TGG - chr1_3:28284251-28284270 Msa0112770:intron 40.0%
AGACGCTAACATACAAGATG+AGG + chr1_3:28284780-28284799 None:intergenic 40.0%
TAGCGTCTTCCAAACTTAGT+TGG - chr1_3:28284792-28284811 Msa0112770:CDS 40.0%
AGCACTAGGGTTAAGGAATT+TGG + chr1_3:28284845-28284864 None:intergenic 40.0%
CGACAACAATGATTAGCACT+AGG + chr1_3:28284859-28284878 None:intergenic 40.0%
CGGAAGCAAATAATGAGGAA+AGG - chr1_3:28285038-28285057 Msa0112770:intron 40.0%
! GAAAGGTGCATTGTCTTATG+TGG - chr1_3:28285055-28285074 Msa0112770:intron 40.0%
ATTCAGCTAGCAAATCAACG+AGG + chr1_3:28285090-28285109 None:intergenic 40.0%
TAAGCAGAGATCAGGTAGTA+AGG + chr1_3:28285126-28285145 None:intergenic 40.0%
TGCTTAACCTACGTCTCTAA+TGG - chr1_3:28285140-28285159 Msa0112770:intron 40.0%
AGGCTGTGCAAGGTTTAAAT+GGG - chr1_3:28285210-28285229 Msa0112770:intron 40.0%
! TTGTGAACTTGAAGGTACAC+TGG + chr1_3:28285739-28285758 None:intergenic 40.0%
TATCATGCAGGAACTAGCTA+AGG + chr1_3:28285811-28285830 None:intergenic 40.0%
!! TATGGTGCTGTACTTCATGA+TGG - chr1_3:28285845-28285864 Msa0112770:intron 40.0%
ATGATGGCACCAGAATGTTA+TGG - chr1_3:28285861-28285880 Msa0112770:intron 40.0%
TCCTCATTAATGCGCAATAG+TGG + chr1_3:28285958-28285977 None:intergenic 40.0%
TCTTCACTACTGACAGTTTC+AGG - chr1_3:28286040-28286059 Msa0112770:intron 40.0%
GAACAAAGAAAATAGCAGCG+GGG - chr1_3:28286144-28286163 Msa0112770:intron 40.0%
TATGGATGCAGCTAATGTTG+AGG - chr1_3:28286243-28286262 Msa0112770:intron 40.0%
TTAGCCAGTCAGATCAGAAA+GGG - chr1_3:28286676-28286695 Msa0112770:intron 40.0%
! TTTTTCTTTCAGCTCGCACA+CGG + chr1_3:28286778-28286797 None:intergenic 40.0%
CTACTTCTTGCTTGATGTGA+AGG - chr1_3:28286859-28286878 Msa0112770:intron 40.0%
AAAGCAAGAGCTGAGAAGTA+TGG - chr1_3:28286905-28286924 Msa0112770:intron 40.0%
AAGCATGTTCTTGCTCTTGA+AGG + chr1_3:28286946-28286965 None:intergenic 40.0%
GCTTTCAAATCTGGACAACT+AGG - chr1_3:28286962-28286981 Msa0112770:CDS 40.0%
GGTTGAAGAGACTAGAACAT+CGG - chr1_3:28287102-28287121 Msa0112770:CDS 40.0%
! CTCTTATATTTAGGACCACG+GGG - chr1_3:28287418-28287437 Msa0112770:five_prime_UTR 40.0%
GATTTCGCCATTCTTGGGTT+TGG + chr1_3:28279296-28279315 None:intergenic 45.0%
CTTCTTCTTCTTCTTGCTGG+TGG + chr1_3:28279348-28279367 None:intergenic 45.0%
TGCTTTCATGGCTACTGCTT+CGG + chr1_3:28279390-28279409 None:intergenic 45.0%
!! GTGACCAGATTGACTCGAAT+GGG + chr1_3:28279436-28279455 None:intergenic 45.0%
!! TCGAAGTAATGGGTCAGAAG+CGG - chr1_3:28279465-28279484 Msa0112770:three_prime_UTR 45.0%
TACCATGAGCATTATGACGC+GGG + chr1_3:28280233-28280252 None:intergenic 45.0%
AGGCCTGTTACTGTGACTTT+AGG - chr1_3:28280300-28280319 Msa0112770:intron 45.0%
GGCCTGTTACTGTGACTTTA+GGG - chr1_3:28280301-28280320 Msa0112770:intron 45.0%
GAATCGAACCTAAGACCTTG+AGG - chr1_3:28280424-28280443 Msa0112770:intron 45.0%
GTAGATTAACCCACTTGGGT+TGG + chr1_3:28280488-28280507 None:intergenic 45.0%
GGAAAAAGATGAAGACCTGC+TGG - chr1_3:28280806-28280825 Msa0112770:intron 45.0%
AAAGATGAAGACCTGCTGGA+AGG - chr1_3:28280810-28280829 Msa0112770:intron 45.0%
CCTTATCTAATCCTTCCAGC+AGG + chr1_3:28280824-28280843 None:intergenic 45.0%
CCTGCTGGAAGGATTAGATA+AGG - chr1_3:28280821-28280840 Msa0112770:intron 45.0%
TGGTTCAGTCAGAGACAACA+AGG + chr1_3:28280874-28280893 None:intergenic 45.0%
!! GATGAAAGCTTTGAAGGCTC+TGG - chr1_3:28280899-28280918 Msa0112770:intron 45.0%
GTTGTCTTCAGCCTATCTGA+AGG + chr1_3:28281151-28281170 None:intergenic 45.0%
GACAACAGAAGAGATTGCTC+AGG - chr1_3:28281165-28281184 Msa0112770:intron 45.0%
AACAGAAGAGATTGCTCAGG+AGG - chr1_3:28281168-28281187 Msa0112770:intron 45.0%
AAGAGAACGTCTAGAGGAGT+TGG - chr1_3:28281192-28281211 Msa0112770:intron 45.0%
GCCAACAATCTTGCAAGTGA+CGG + chr1_3:28281479-28281498 None:intergenic 45.0%
!! ATTGTTGGCTTGTAACCCTG+TGG - chr1_3:28281490-28281509 Msa0112770:intron 45.0%
GACTATCACCAAGATCCACA+GGG + chr1_3:28281508-28281527 None:intergenic 45.0%
TGACTATCACCAAGATCCAC+AGG + chr1_3:28281509-28281528 None:intergenic 45.0%
! GTGGATCTTGGTGATAGTCA+TGG - chr1_3:28281509-28281528 Msa0112770:intron 45.0%
! ATTTTACTCCCATGTGCAGC+GGG + chr1_3:28281542-28281561 None:intergenic 45.0%
TTCACTCGAATCTTCAGCAG+CGG + chr1_3:28281645-28281664 None:intergenic 45.0%
GAGAAACCAAGATCTCTCTC+TGG - chr1_3:28281698-28281717 Msa0112770:intron 45.0%
TCATCACCAGAGAGAGATCT+TGG + chr1_3:28281707-28281726 None:intergenic 45.0%
TCTTGAGAGAAGAGATGAGG+AGG - chr1_3:28281790-28281809 Msa0112770:intron 45.0%
! AGAAGACGAAGATGATGACG+AGG - chr1_3:28282006-28282025 Msa0112770:CDS 45.0%
ACCAAGAAGATAGTCGTTGG+AGG - chr1_3:28282145-28282164 Msa0112770:intron 45.0%
TCCTCCAACGACTATCTTCT+TGG + chr1_3:28282149-28282168 None:intergenic 45.0%
! ACACCAGAAGTGTGATCTCT+TGG - chr1_3:28282430-28282449 Msa0112770:intron 45.0%
AGTCCAAGAGATCACACTTC+TGG + chr1_3:28282436-28282455 None:intergenic 45.0%
! TACAAGTCTTGTAGGGCAGT+AGG + chr1_3:28282627-28282646 None:intergenic 45.0%
TATGGTACACAGCTAACAGG+GGG - chr1_3:28282679-28282698 Msa0112770:intron 45.0%
CTATCACAGAAAGTAGCAGC+TGG - chr1_3:28283451-28283470 Msa0112770:CDS 45.0%
ATGCGTTGCCCAATAACATC+TGG - chr1_3:28283585-28283604 Msa0112770:intron 45.0%
! AGAAAGTAACTTGCCACACG+AGG + chr1_3:28283664-28283683 None:intergenic 45.0%
AAAGGACCGCGGAAGATATT+TGG + chr1_3:28283715-28283734 None:intergenic 45.0%
ACGTCTAACTTAAAGGACCG+CGG + chr1_3:28283726-28283745 None:intergenic 45.0%
!!! GGAAGGATGCCACTTTTTCA+TGG + chr1_3:28284352-28284371 None:intergenic 45.0%
! TCTTAGAAAGCACAGACCAG+AGG + chr1_3:28284426-28284445 None:intergenic 45.0%
CGCTAACATACAAGATGAGG+AGG + chr1_3:28284777-28284796 None:intergenic 45.0%
!! TCGAACAAACTGGTGTTGCT+TGG - chr1_3:28284876-28284895 Msa0112770:CDS 45.0%
ACGTAGGTTAAGCAGAGATC+AGG + chr1_3:28285134-28285153 None:intergenic 45.0%
TTACTGAAAAAGGGGAGCAG+AGG - chr1_3:28285186-28285205 Msa0112770:intron 45.0%
CAGGCTGTGCAAGGTTTAAA+TGG - chr1_3:28285209-28285228 Msa0112770:intron 45.0%
TGGCACCAGAATGTTATGGT+TGG - chr1_3:28285865-28285884 Msa0112770:intron 45.0%
GCCACTATTGCGCATTAATG+AGG - chr1_3:28285954-28285973 Msa0112770:CDS 45.0%
GTGAAGAATGGAGAGTCTTC+AGG + chr1_3:28286027-28286046 None:intergenic 45.0%
ACCTCTGTTGAAACCCTACA+AGG - chr1_3:28286368-28286387 Msa0112770:CDS 45.0%
TCCTTGTAGGGTTTCAACAG+AGG + chr1_3:28286372-28286391 None:intergenic 45.0%
CTTAGCCAGTCAGATCAGAA+AGG - chr1_3:28286675-28286694 Msa0112770:intron 45.0%
AGTTCCCTTTCTGATCTGAC+TGG + chr1_3:28286683-28286702 None:intergenic 45.0%
! CAAGAGCTGAGAAGTATGGA+AGG - chr1_3:28286909-28286928 Msa0112770:intron 45.0%
!! AAAAAAAAAAAAAAAATAAC+TGG + chr1_3:28280362-28280381 None:intergenic 5.0%
!!! AAAATTTTAGAATATTAAAT+CGG - chr1_3:28285235-28285254 Msa0112770:intron 5.0%
!!! GTTTGGTTTTGAGCGGCAGA+GGG + chr1_3:28279279-28279298 None:intergenic 50.0%
CTTCTTCTTCTTGCTGGTGG+TGG + chr1_3:28279345-28279364 None:intergenic 50.0%
GCTTTCATGGCTACTGCTTC+GGG + chr1_3:28279389-28279408 None:intergenic 50.0%
!! CCAGATTGACTCGAATGGGT+TGG + chr1_3:28279432-28279451 None:intergenic 50.0%
CCAACCCATTCGAGTCAATC+TGG - chr1_3:28279429-28279448 Msa0112770:three_prime_UTR 50.0%
!! CGTGACCAGATTGACTCGAA+TGG + chr1_3:28279437-28279456 None:intergenic 50.0%
TCGAGTCAATCTGGTCACGT+AGG - chr1_3:28279438-28279457 Msa0112770:three_prime_UTR 50.0%
!! GTAATGGGTCAGAAGCGGAA+AGG - chr1_3:28279470-28279489 Msa0112770:three_prime_UTR 50.0%
! ACGTGCCAACCCCATTCTTT+TGG + chr1_3:28279501-28279520 None:intergenic 50.0%
CTCATGGTATGCAGAGTCCA+GGG - chr1_3:28280244-28280263 Msa0112770:CDS 50.0%
TCATGGTATGCAGAGTCCAG+GGG - chr1_3:28280245-28280264 Msa0112770:CDS 50.0%
CTGACGGTGGGGAAAATGTA+AGG - chr1_3:28280280-28280299 Msa0112770:intron 50.0%
TCGAACCTAAGACCTTGAGG+AGG - chr1_3:28280427-28280446 Msa0112770:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + chr1_3:28280468-28280487 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + chr1_3:28280469-28280488 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + chr1_3:28280474-28280493 None:intergenic 50.0%
AGTCAGAGACAACAAGGCCT+CGG + chr1_3:28280868-28280887 None:intergenic 50.0%
GGAGGAAAGAGAACGTCTAG+AGG - chr1_3:28281186-28281205 Msa0112770:intron 50.0%
AGAACGTCTAGAGGAGTTGG+AGG - chr1_3:28281195-28281214 Msa0112770:intron 50.0%
GCCGTCACTTGCAAGATTGT+TGG - chr1_3:28281475-28281494 Msa0112770:intron 50.0%
GCTTGTAACCCTGTGGATCT+TGG - chr1_3:28281497-28281516 Msa0112770:intron 50.0%
! TCTCTCTCTGGTGATGACCT+TGG - chr1_3:28281710-28281729 Msa0112770:intron 50.0%
TGAGAGAAGAGATGAGGAGG+AGG - chr1_3:28281793-28281812 Msa0112770:intron 50.0%
GAGAGAAGAGATGAGGAGGA+GGG - chr1_3:28281794-28281813 Msa0112770:intron 50.0%
! GACGAAGATGATGACGAGGA+CGG - chr1_3:28282010-28282029 Msa0112770:CDS 50.0%
! ATGTAGAAAGCACGTGCCTG+TGG - chr1_3:28282949-28282968 Msa0112770:intron 50.0%
CGCTATGTCTCTTGCGATTG+TGG - chr1_3:28283487-28283506 Msa0112770:intron 50.0%
TCTCTTGCGATTGTGGTCCA+TGG - chr1_3:28283494-28283513 Msa0112770:intron 50.0%
CTCTCTGTAAGTACCTCGTG+TGG - chr1_3:28283648-28283667 Msa0112770:intron 50.0%
TGAGGCGACCACTTCAAATG+CGG - chr1_3:28286558-28286577 Msa0112770:intron 50.0%
AGGTGAGGCGTGAAGCTAAA+GGG - chr1_3:28286810-28286829 Msa0112770:intron 50.0%
GACCACGGGGAGTAAAATGT+TGG - chr1_3:28287431-28287450 Msa0112770:five_prime_UTR 50.0%
! TGCCAACATTTTACTCCCCG+TGG + chr1_3:28287436-28287455 None:intergenic 50.0%
!!! GGTTTGGTTTTGAGCGGCAG+AGG + chr1_3:28279280-28279299 None:intergenic 55.0%
TCGAAACGCAGCATCGCCAA+CGG - chr1_3:28279317-28279336 Msa0112770:intron 55.0%
GCTCATGGTATGCAGAGTCC+AGG - chr1_3:28280243-28280262 Msa0112770:CDS 55.0%
! AAGCTGGTCTAGCTGACGGT+GGG - chr1_3:28280268-28280287 Msa0112770:intron 55.0%
GTGCTCCTCCTCAAGGTCTT+AGG + chr1_3:28280435-28280454 None:intergenic 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG + chr1_3:28280461-28280480 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG + chr1_3:28280462-28280481 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG - chr1_3:28280462-28280481 Msa0112770:intron 55.0%
TACCACTAGGCCAACCCAAG+TGG - chr1_3:28280475-28280494 Msa0112770:intron 55.0%
ACCACTAGGCCAACCCAAGT+GGG - chr1_3:28280476-28280495 Msa0112770:intron 55.0%
! CACTTCTCTGGCTCATTCCG+AGG - chr1_3:28280848-28280867 Msa0112770:CDS 55.0%
TGCGTGCTCGTCCTTCAGAT+AGG - chr1_3:28281137-28281156 Msa0112770:intron 55.0%
CGACAGAGAAGGAATCGCCA+AGG + chr1_3:28281730-28281749 None:intergenic 55.0%
TCTGGCCGTGATATTGCCGT+TGG - chr1_3:28283603-28283622 Msa0112770:intron 55.0%
TGAAAAAGGGGAGCAGAGGC+AGG - chr1_3:28285190-28285209 Msa0112770:intron 55.0%
GAGGTGAGGCGTGAAGCTAA+AGG - chr1_3:28286809-28286828 Msa0112770:intron 55.0%
GGTGAGGCGTGAAGCTAAAG+GGG - chr1_3:28286811-28286830 Msa0112770:intron 55.0%
! TTTTGAGCGGCAGAGGGTGG+TGG + chr1_3:28279273-28279292 None:intergenic 60.0%
!!! TGGTTTTGAGCGGCAGAGGG+TGG + chr1_3:28279276-28279295 None:intergenic 60.0%
!! CTTGCTGGTGGTGGTTCCGT+TGG + chr1_3:28279336-28279355 None:intergenic 60.0%
GGCCCGCGTCATAATGCTCA+TGG - chr1_3:28280228-28280247 Msa0112770:CDS 60.0%
ATGCAGAGTCCAGGGGAAGC+TGG - chr1_3:28280252-28280271 Msa0112770:CDS 60.0%
TCAGCTAGACCAGCTTCCCC+TGG + chr1_3:28280264-28280283 None:intergenic 60.0%
! GGGGAAGCTGGTCTAGCTGA+CGG - chr1_3:28280264-28280283 Msa0112770:intron 60.0%
! GAAGCTGGTCTAGCTGACGG+TGG - chr1_3:28280267-28280286 Msa0112770:intron 60.0%
! AGCTGGTCTAGCTGACGGTG+GGG - chr1_3:28280269-28280288 Msa0112770:intron 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr1_3:28280442-28280461 None:intergenic 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - chr1_3:28280441-28280460 Msa0112770:intron 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG + chr1_3:28280480-28280499 None:intergenic 60.0%
CAGGGCAAGAAGAACCCTCG+AGG + chr1_3:28281016-28281035 None:intergenic 60.0%
TGCAAGTGACGGCATTGCCG+AGG + chr1_3:28281468-28281487 None:intergenic 60.0%
GAAATGGGCCCGCTGCACAT+GGG - chr1_3:28281531-28281550 Msa0112770:intron 60.0%
CTTTCAGCTCGCACACGGTC+TGG + chr1_3:28286773-28286792 None:intergenic 60.0%
GAGATCGCAGCGCGAACGTC+AGG - chr1_3:28279652-28279671 Msa0112770:CDS 65.0%
GGAAATGGGCCCGCTGCACA+TGG - chr1_3:28281530-28281549 Msa0112770:intron 65.0%
GAGCAGAGGCAGGCTGTGCA+AGG - chr1_3:28285200-28285219 Msa0112770:intron 65.0%
!! GCGGCAGAGGGTGGTGGAGA+AGG + chr1_3:28279267-28279286 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 28279166 28287462 28279166 ID=Msa0112770;Name=Msa0112770
chr1_3 mRNA 28279166 28287462 28279166 ID=Msa0112770-mRNA-1;Parent=Msa0112770;Name=Msa0112770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|0.73|0.81|0.93|0.73|0.75|16|292|978
chr1_3 exon 28279166 28279186 28279166 ID=Msa0112770-mRNA-1:exon:9320;Parent=Msa0112770-mRNA-1
chr1_3 exon 28279326 28279516 28279326 ID=Msa0112770-mRNA-1:exon:9319;Parent=Msa0112770-mRNA-1
chr1_3 exon 28279539 28279883 28279539 ID=Msa0112770-mRNA-1:exon:9318;Parent=Msa0112770-mRNA-1
chr1_3 exon 28279998 28280276 28279998 ID=Msa0112770-mRNA-1:exon:9317;Parent=Msa0112770-mRNA-1
chr1_3 exon 28280567 28280706 28280567 ID=Msa0112770-mRNA-1:exon:9316;Parent=Msa0112770-mRNA-1
chr1_3 exon 28280833 28280898 28280833 ID=Msa0112770-mRNA-1:exon:9315;Parent=Msa0112770-mRNA-1
chr1_3 exon 28281963 28282067 28281963 ID=Msa0112770-mRNA-1:exon:9314;Parent=Msa0112770-mRNA-1
chr1_3 exon 28283008 28283168 28283008 ID=Msa0112770-mRNA-1:exon:9313;Parent=Msa0112770-mRNA-1
chr1_3 exon 28283282 28283474 28283282 ID=Msa0112770-mRNA-1:exon:9312;Parent=Msa0112770-mRNA-1
chr1_3 exon 28284289 28285008 28284289 ID=Msa0112770-mRNA-1:exon:9311;Parent=Msa0112770-mRNA-1
chr1_3 exon 28285412 28285540 28285412 ID=Msa0112770-mRNA-1:exon:9310;Parent=Msa0112770-mRNA-1
chr1_3 exon 28285630 28285842 28285630 ID=Msa0112770-mRNA-1:exon:9309;Parent=Msa0112770-mRNA-1
chr1_3 exon 28285934 28285993 28285934 ID=Msa0112770-mRNA-1:exon:9308;Parent=Msa0112770-mRNA-1
chr1_3 exon 28286317 28286414 28286317 ID=Msa0112770-mRNA-1:exon:9307;Parent=Msa0112770-mRNA-1
chr1_3 exon 28286689 28286827 28286689 ID=Msa0112770-mRNA-1:exon:9306;Parent=Msa0112770-mRNA-1
chr1_3 exon 28286955 28287462 28286955 ID=Msa0112770-mRNA-1:exon:9305;Parent=Msa0112770-mRNA-1
chr1_3 five_prime_UTR 28287324 28287462 28287324 ID=Msa0112770-mRNA-1:five_prime_utr;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28286955 28287323 28286955 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28286689 28286827 28286689 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28286317 28286414 28286317 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28285934 28285993 28285934 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28285630 28285842 28285630 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28285412 28285540 28285412 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28284289 28285008 28284289 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28283282 28283474 28283282 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28283008 28283168 28283008 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28281963 28282067 28281963 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28280833 28280898 28280833 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28280567 28280706 28280567 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28279998 28280276 28279998 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 CDS 28279619 28279883 28279619 ID=Msa0112770-mRNA-1:cds;Parent=Msa0112770-mRNA-1
chr1_3 three_prime_UTR 28279539 28279618 28279539 ID=Msa0112770-mRNA-1:three_prime_utr;Parent=Msa0112770-mRNA-1
chr1_3 three_prime_UTR 28279326 28279516 28279326 ID=Msa0112770-mRNA-1:three_prime_utr;Parent=Msa0112770-mRNA-1
chr1_3 three_prime_UTR 28279166 28279186 28279166 ID=Msa0112770-mRNA-1:three_prime_utr;Parent=Msa0112770-mRNA-1
Gene Sequence

>Msa0112770

ATGGCGAAATCATCGAAACGCAGCATCGCCAACGGAACCACCACCAGCAAGAAGAAGAAGAAGAACAACAACAAGATGGGTCCCGAAGCAGTAGCCATGAAAGCAAAAGCTCAAAAAACAAACACCAACCCATTCGAGTCAATCTGGTCACGTAGGAAGTTCGAAGTAATGGGTCAGAAGCGGAAAGGAGATACCAAAAGAATGGGGTTGGCACGTTCTCTTGCTATTGAGAAGAGGAAGAAGACGTTGCTTAAAGAGTATGAGCAGAGTACCAAATCGTCCGAGTTTATTGATAGAAGAATTGGTGAAAATGATGAAGGCCTTGATGATTTTGGTAAAGCTATTTTGAGATCGCAGCGCGAACGTCAGTTGAATGTGAAATCGAGTAAGAAAAGCAAGTATCACTTGTCAGAAGAAGACGATGATGATGAATTTGAAGGAATTGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTCGGGAAGATGATGATGAAACTGATGATATTTCAGATTTGGGCCCGCGTCATAATGCTCATGGTATGCAGAGTCCAGGGGAAGCTGGTCTAGCTGACGGTGGGGAAAATGTAAGGCCTGTTACTCGACATAAAACCAAGAAGGAAGTGATGAACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGCTGAAAAAGCAAAAGAAAAGGAAAAAGATGAAGACCTGCTGGAAGGATTAGATAAGGACTTCACTTCTCTGGCTCATTCCGAGGCCTTGTTGTCTCTGACTGAACCAAACAAGATGAAAGCTTTGAAGGCTCTGGTGAACAGTAGTATTTCAAATGAAAAAAGTGATAAAGATAGCTTGTCTGCTAAACGGACAATGAATAATTCTGTTCAGGAAAAGCCAGATGAATATGACCAACTTGTCAGACAATTGGGATTTGAAATGCGTGCTCGTCCTTCAGATAGGCTGAAGACAACAGAAGAGATTGCTCAGGAGGAAAGAGAACGTCTAGAGGAGTTGGAGAAAAAACGGCAGAAGAGAATGACCGCTGCTGAAGATTCGAGTGAAGAAGACGATGAAGAATCAGAAAAGCCATCAAAAGAGAAACCAAGATCTCTCTCTGGTGATGACCTTGGCGATTCCTTCTCTGTCGATGAAGAAACTATGACTAAAAAGGGTTGGGTTGATGAGATTCTTGAGAGAAGAGATGAGGAGGAGGGTTCTTCTAGTGAAGATGATGATGGTGAAGATTCTGATGATTCGGAAAGGTCTGAAGATTCTGATGAAGGATCTGAGGATGATCTTGATGAAAACAATAAGAATACTACTTTGAAAGATTGGGAACAGAGTGATGATGATGATATCAGTTCAGGTTCAGAAGGTGAAGATGATGATATCAGTGCTGGTTCAGAAGACGAAGATGATGACGAGGACGGAGAAAGAGCTGCAGAAGTTGATAAGGTAAAAGGATTGAATGTTGGGATTCATAAAAAAGCAAAGAGAAATGATTCTGTTGGATGTGTAAAGGGAGATAATGGTTCTTTAGATACCAAGAAGATAGTCGTTGGAGGAAAAATGTCGAAAGAGTTGGAGATTCCTTATATAATTGAAGCTCCGAAGACCTTTGAAGAATTATGTTCACTGGTGGATAAACGTTCAAATTCTGACACTATCTTAATCATCAATCGGATTCGGAAAAGCAATCCGATCACACTTGCTGCAGAAAATCGAAAGAAAGTACAAGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAAACGTTGAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACGGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAAACGCAGAAAGTAGCAGCTGGCCTTCTTCAAAGACGCTATGTCTCTTGCGATTGTGGTCCATGGTATTTCCATGTTCCGATTTTAGACATCCAGTTATGACTCCTGTGATACTATTGATGTGCGAATATCTGATGCGTTGCCCAATAACATCTGGCCGTGATATTGCCGTATTTAAACAGTCACGAAAGTTCTGTCCTGAACCAATAGTATTTATTCAAACTTTGCTGCTAGCAACCACTGAAAGTAAACATATATCATGCGAAAATTCTCAGTCTGTACCAGTGTACCTTCAAGTTCACAAAAAACTCTTCGCTTTCTTGTATTTGAGGTTTGCTCAATTATATCATCTTATGGAACTGAAAGATCTCAAGCCACTATTGCGCATTAATGAGGAAGTAGACAAGATTAGCGCTTTGAATTTCTTTAAGTTAATAGACATGCCTGAAGACTCTCCATTCTTCACTACTGACAGTTTCAGGGCTAGTTTATTAGTTACCTCTGTTGAAACCCTACAAGGATATATCAATGCCTATGATAACTTGAGTTCGTTCCCAGAAATATTTTCACCAATTTTGAGATTACTACTTGAGATAGCTGAACAGAAAAATATGCCAAATGCATTACGGGATAAAATTAAAGATGTGGCTGAGCTGATTAAGTTGAAAGTGGATGAACATCATACTTTGAGGCGACCACTTCAAATGCGGAAACAAAAGCCAGTTCCAATCAAATTACTGAATCCTAAGTTTGAGGAAAACTATGTTAAGGGTAGAGATTATGATCCAGACCGTGTGCGAGCTGAAAGAAAAAAATTGAAGAGAGAGGTGAGGCGTGAAGCTAAAGGGGCTGCTCGTGAAATACGTAAAGACAACTACTTCTTGCTTGATGTGAAGGAAAAAGAAAGGTCTTTAATGGAGAAAGCAAGAGCTGAGAAGTATGGAAGGACTAAAGCTTTCCTTCAAGAGCAAGAACATGCTTTCAAATCTGGACAACTAGGAAAAGGGAAGAAGAGAAGTAGATAA
Protein sequence

>Msa0112770

MAKSSKRSIANGTTTSKKKKKNNNKMGPEAVAMKAKAQKTNTNPFESIWSRRKFEVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEYEQSTKSSEFIDRRIGENDEGLDDFGKAILRSQRERQLNVKSSKKSKYHLSEEDDDDEFEGIDGLGRDDFEDEMLREDDDETDDISDLGPRHNAHGMQSPGEAGLADGGENVRPVTRHKTKKEVMNEVIAKSKFYKAEKAKEKEKDEDLLEGLDKDFTSLAHSEALLSLTEPNKMKALKALVNSSISNEKSDKDSLSAKRTMNNSVQEKPDEYDQLVRQLGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMTAAEDSSEEDDEESEKPSKEKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGEDSDDSERSEDSDEGSEDDLDENNKNTTLKDWEQSDDDDISSGSEGEDDDISAGSEDEDDDEDGERAAEVDKVKGLNVGIHKKAKRNDSVGCVKGDNGSLDTKKIVVGGKMSKELEIPYIIEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKTLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKTLCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVFKQSRKFCPEPIVFIQTLLLATTESKHISCENSQSVPVYLQVHKKLFAFLYLRFAQLYHLMELKDLKPLLRINEEVDKISALNFFKLIDMPEDSPFFTTDSFRASLLVTSVETLQGYINAYDNLSSFPEIFSPILRLLLEIAEQKNMPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDPDRVRAERKKLKREVRREAKGAAREIRKDNYFLLDVKEKERSLMEKARAEKYGRTKAFLQEQEHAFKSGQLGKGKKRSR*