Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368060 | XP_013468183.1 | 96.684 | 965 | 28 | 3 | 1 | 962 | 1 | 964 | 0.0 | 1883 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368060 | sp|P78316|NOP14_HUMAN | 28.775 | 914 | 535 | 20 | 16 | 916 | 4 | 814 | 1.29e-89 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368060 | A0A072VVU7 | 96.684 | 965 | 28 | 3 | 1 | 962 | 1 | 964 | 0.0 | 1883 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa1368060 | 0.811108 | 8.253758e-51 | -8.615850e-47 |
| Msa0026150 | Msa1368060 | 0.827164 | 1.819578e-54 | -8.615850e-47 |
| Msa0032580 | Msa1368060 | 0.809813 | 1.571763e-50 | -8.615850e-47 |
| Msa0040690 | Msa1368060 | 0.810069 | 1.384553e-50 | -8.615850e-47 |
| Msa0043660 | Msa1368060 | 0.822488 | 2.306302e-53 | -8.615850e-47 |
| Msa0047160 | Msa1368060 | 0.857861 | 1.222937e-62 | -8.615850e-47 |
| Msa0054440 | Msa1368060 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
| Msa0054480 | Msa1368060 | 0.802460 | 5.550582e-49 | -8.615850e-47 |
| Msa0059110 | Msa1368060 | 0.807211 | 5.646423e-50 | -8.615850e-47 |
| Msa0073700 | Msa1368060 | 0.811215 | 7.826268e-51 | -8.615850e-47 |
| Msa0076780 | Msa1368060 | 0.830037 | 3.679172e-55 | -8.615850e-47 |
| Msa0094470 | Msa1368060 | 0.861000 | 1.394360e-63 | -8.615850e-47 |
| Msa0105620 | Msa1368060 | 0.808137 | 3.590290e-50 | -8.615850e-47 |
| Msa0109690 | Msa1368060 | 0.810302 | 1.233293e-50 | -8.615850e-47 |
| Msa0112770 | Msa1368060 | 0.872136 | 4.009463e-67 | -8.615850e-47 |
| Msa1355700 | Msa1368060 | 0.836712 | 7.970149e-57 | -8.615850e-47 |
| Msa1356440 | Msa1368060 | 0.817670 | 2.924093e-52 | -8.615850e-47 |
| Msa1357890 | Msa1368060 | 0.808461 | 3.062385e-50 | -8.615850e-47 |
| Msa1358250 | Msa1368060 | 0.807952 | 3.931459e-50 | -8.615850e-47 |
| Msa1366600 | Msa1368060 | 0.808941 | 2.418516e-50 | -8.615850e-47 |
| Msa1368060 | Msa1392780 | 0.815724 | 7.981942e-52 | -8.615850e-47 |
| Msa1368060 | Msa1394290 | 0.863348 | 2.654550e-64 | -8.615850e-47 |
| Msa1368060 | Msa1398090 | 0.809314 | 2.011407e-50 | -8.615850e-47 |
| Msa1368060 | Msa1400580 | 0.818179 | 2.244043e-52 | -8.615850e-47 |
| Msa1368060 | Msa1419870 | 0.809795 | 1.585587e-50 | -8.615850e-47 |
| Msa1368060 | Msa1444310 | 0.832127 | 1.128596e-55 | -8.615850e-47 |
| Msa1368060 | Msa1457920 | 0.835323 | 1.793861e-56 | -8.615850e-47 |
| Msa0605000 | Msa1368060 | 0.833808 | 4.310045e-56 | -8.615850e-47 |
| Msa0615440 | Msa1368060 | 0.817040 | 4.052606e-52 | -8.615850e-47 |
| Msa0631350 | Msa1368060 | 0.803217 | 3.873134e-49 | -8.615850e-47 |
| Msa0656580 | Msa1368060 | 0.800989 | 1.112571e-48 | -8.615850e-47 |
| Msa0663390 | Msa1368060 | 0.804851 | 1.771388e-49 | -8.615850e-47 |
| Msa0685140 | Msa1368060 | 0.842926 | 1.918752e-58 | -8.615850e-47 |
| Msa0689260 | Msa1368060 | 0.803068 | 4.159265e-49 | -8.615850e-47 |
| Msa0691290 | Msa1368060 | 0.825812 | 3.821386e-54 | -8.615850e-47 |
| Msa0691900 | Msa1368060 | 0.818327 | 2.076851e-52 | -8.615850e-47 |
| Msa0698060 | Msa1368060 | 0.806569 | 7.716928e-50 | -8.615850e-47 |
| Msa0698490 | Msa1368060 | 0.819231 | 1.294364e-52 | -8.615850e-47 |
| Msa0698660 | Msa1368060 | 0.819808 | 9.560191e-53 | -8.615850e-47 |
| Msa0698800 | Msa1368060 | 0.803521 | 3.350661e-49 | -8.615850e-47 |
| Msa0709500 | Msa1368060 | 0.801503 | 8.733388e-49 | -8.615850e-47 |
| Msa0711780 | Msa1368060 | 0.810471 | 1.134109e-50 | -8.615850e-47 |
| Msa0715650 | Msa1368060 | 0.815234 | 1.025985e-51 | -8.615850e-47 |
| Msa0719420 | Msa1368060 | 0.820521 | 6.565800e-53 | -8.615850e-47 |
| Msa0721280 | Msa1368060 | 0.807398 | 5.154653e-50 | -8.615850e-47 |
| Msa0772480 | Msa1368060 | 0.843250 | 1.572535e-58 | -8.615850e-47 |
| Msa0789680 | Msa1368060 | 0.822653 | 2.111321e-53 | -8.615850e-47 |
| Msa0790850 | Msa1368060 | 0.802305 | 5.975535e-49 | -8.615850e-47 |
| Msa0794670 | Msa1368060 | 0.823936 | 1.058735e-53 | -8.615850e-47 |
| Msa0796530 | Msa1368060 | 0.809876 | 1.523793e-50 | -8.615850e-47 |
| Msa0798440 | Msa1368060 | 0.843015 | 1.816316e-58 | -8.615850e-47 |
| Msa0802410 | Msa1368060 | 0.833044 | 6.686494e-56 | -8.615850e-47 |
| Msa0808270 | Msa1368060 | 0.810976 | 8.816725e-51 | -8.615850e-47 |
| Msa0830390 | Msa1368060 | 0.803809 | 2.920206e-49 | -8.615850e-47 |
| Msa0830540 | Msa1368060 | 0.818888 | 1.549779e-52 | -8.615850e-47 |
| Msa0831530 | Msa1368060 | 0.810456 | 1.142660e-50 | -8.615850e-47 |
| Msa0127020 | Msa1368060 | 0.818953 | 1.497741e-52 | -8.615850e-47 |
| Msa0137550 | Msa1368060 | 0.814690 | 1.354742e-51 | -8.615850e-47 |
| Msa0146770 | Msa1368060 | 0.817539 | 3.129761e-52 | -8.615850e-47 |
| Msa0150820 | Msa1368060 | 0.805383 | 1.370688e-49 | -8.615850e-47 |
| Msa0167480 | Msa1368060 | 0.802085 | 6.631327e-49 | -8.615850e-47 |
| Msa0169280 | Msa1368060 | 0.817722 | 2.845123e-52 | -8.615850e-47 |
| Msa0172970 | Msa1368060 | 0.804291 | 2.318423e-49 | -8.615850e-47 |
| Msa0187120 | Msa1368060 | 0.808904 | 2.462750e-50 | -8.615850e-47 |
| Msa0189300 | Msa1368060 | 0.838233 | 3.247423e-57 | -8.615850e-47 |
| Msa0214710 | Msa1368060 | 0.813120 | 3.006288e-51 | -8.615850e-47 |
| Msa0220720 | Msa1368060 | 0.808209 | 3.465102e-50 | -8.615850e-47 |
| Msa0226470 | Msa1368060 | 0.847202 | 1.342664e-59 | -8.615850e-47 |
| Msa0227400 | Msa1368060 | 0.845201 | 4.706020e-59 | -8.615850e-47 |
| Msa0228070 | Msa1368060 | 0.800807 | 1.211931e-48 | -8.615850e-47 |
| Msa0229170 | Msa1368060 | 0.806913 | 6.530381e-50 | -8.615850e-47 |
| Msa0231660 | Msa1368060 | 0.838898 | 2.186660e-57 | -8.615850e-47 |
| Msa1237940 | Msa1368060 | 0.812803 | 3.526755e-51 | -8.615850e-47 |
| Msa1245930 | Msa1368060 | 0.810228 | 1.279696e-50 | -8.615850e-47 |
| Msa1257130 | Msa1368060 | 0.802405 | 5.698451e-49 | -8.615850e-47 |
| Msa1259060 | Msa1368060 | 0.813691 | 2.251655e-51 | -8.615850e-47 |
| Msa1265630 | Msa1368060 | 0.856848 | 2.438013e-62 | -8.615850e-47 |
| Msa1270620 | Msa1368060 | 0.809609 | 1.738630e-50 | -8.615850e-47 |
| Msa1270690 | Msa1368060 | 0.809409 | 1.919572e-50 | -8.615850e-47 |
| Msa1302380 | Msa1368060 | 0.819940 | 8.919940e-53 | -8.615850e-47 |
| Msa1306990 | Msa1368060 | 0.807002 | 6.252212e-50 | -8.615850e-47 |
| Msa1332590 | Msa1368060 | 0.823296 | 1.495221e-53 | -8.615850e-47 |
| Msa0366890 | Msa1368060 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
| Msa0385580 | Msa1368060 | 0.828196 | 1.028508e-54 | -8.615850e-47 |
| Msa0388700 | Msa1368060 | 0.815998 | 6.936890e-52 | -8.615850e-47 |
| Msa0397540 | Msa1368060 | 0.831596 | 1.526008e-55 | -8.615850e-47 |
| Msa0422840 | Msa1368060 | 0.813797 | 2.134050e-51 | -8.615850e-47 |
| Msa0422920 | Msa1368060 | 0.809434 | 1.895827e-50 | -8.615850e-47 |
| Msa0458060 | Msa1368060 | 0.836675 | 8.143969e-57 | -8.615850e-47 |
| Msa0465550 | Msa1368060 | 0.811952 | 5.412581e-51 | -8.615850e-47 |
| Msa0481530 | Msa1368060 | 0.811637 | 6.337750e-51 | -8.615850e-47 |
| Msa0482130 | Msa1368060 | 0.801905 | 7.220442e-49 | -8.615850e-47 |
| Msa0989540 | Msa1368060 | 0.805069 | 1.594974e-49 | -8.615850e-47 |
| Msa0999970 | Msa1368060 | 0.802691 | 4.975970e-49 | -8.615850e-47 |
| Msa1001350 | Msa1368060 | 0.803989 | 2.678911e-49 | -8.615850e-47 |
| Msa1006840 | Msa1368060 | 0.830182 | 3.390924e-55 | -8.615850e-47 |
| Msa1009750 | Msa1368060 | 0.806421 | 8.295963e-50 | -8.615850e-47 |
| Msa1009820 | Msa1368060 | 0.803685 | 3.098593e-49 | -8.615850e-47 |
| Msa1014420 | Msa1368060 | 0.815869 | 7.411306e-52 | -8.615850e-47 |
| Msa1019240 | Msa1368060 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa1041210 | Msa1368060 | 0.823918 | 1.069377e-53 | -8.615850e-47 |
| Msa1051200 | Msa1368060 | 0.815007 | 1.152690e-51 | -8.615850e-47 |
| Msa1055410 | Msa1368060 | 0.820314 | 7.324591e-53 | -8.615850e-47 |
| Msa1077030 | Msa1368060 | 0.816088 | 6.621751e-52 | -8.615850e-47 |
| Msa1084470 | Msa1368060 | 0.809242 | 2.084861e-50 | -8.615850e-47 |
| Msa1091940 | Msa1368060 | 0.836391 | 9.617986e-57 | -8.615850e-47 |
| Msa1093330 | Msa1368060 | 0.821477 | 3.953743e-53 | -8.615850e-47 |
| Msa1097820 | Msa1368060 | 0.803421 | 3.514267e-49 | -8.615850e-47 |
| Msa1104140 | Msa1368060 | 0.819395 | 1.187827e-52 | -8.615850e-47 |
| Msa1104210 | Msa1368060 | 0.803778 | 2.963616e-49 | -8.615850e-47 |
| Msa0241470 | Msa1368060 | 0.808804 | 2.587508e-50 | -8.615850e-47 |
| Msa0279220 | Msa1368060 | 0.810828 | 9.491141e-51 | -8.615850e-47 |
| Msa0279240 | Msa1368060 | 0.820153 | 7.972644e-53 | -8.615850e-47 |
| Msa0299870 | Msa1368060 | 0.806121 | 9.593291e-50 | -8.615850e-47 |
| Msa0309750 | Msa1368060 | 0.845418 | 4.112298e-59 | -8.615850e-47 |
| Msa0309770 | Msa1368060 | 0.821270 | 4.413417e-53 | -8.615850e-47 |
| Msa0318980 | Msa1368060 | 0.803613 | 3.207326e-49 | -8.615850e-47 |
| Msa0344540 | Msa1368060 | 0.966255 | 1.118815e-125 | -8.615850e-47 |
| Msa0345350 | Msa1368060 | 0.804984 | 1.661348e-49 | -8.615850e-47 |
| Msa1119200 | Msa1368060 | 0.813427 | 2.574425e-51 | -8.615850e-47 |
| Msa1121440 | Msa1368060 | 0.800187 | 1.620832e-48 | -8.615850e-47 |
| Msa1133400 | Msa1368060 | 0.808585 | 2.880896e-50 | -8.615850e-47 |
| Msa1137700 | Msa1368060 | 0.818703 | 1.706579e-52 | -8.615850e-47 |
| Msa1160590 | Msa1368060 | 0.821083 | 4.876183e-53 | -8.615850e-47 |
| Msa1179950 | Msa1368060 | 0.814336 | 1.622598e-51 | -8.615850e-47 |
| Msa1179980 | Msa1368060 | 0.811939 | 5.446186e-51 | -8.615850e-47 |
| Msa1181250 | Msa1368060 | 0.801454 | 8.936427e-49 | -8.615850e-47 |
| Msa1208880 | Msa1368060 | 0.814697 | 1.349851e-51 | -8.615850e-47 |
| Msa1209200 | Msa1368060 | 0.822261 | 2.603291e-53 | -8.615850e-47 |
| Msa1209260 | Msa1368060 | 0.800543 | 1.371711e-48 | -8.615850e-47 |
| Msa1209760 | Msa1368060 | 0.826705 | 2.343004e-54 | -8.615850e-47 |
| Msa1217470 | Msa1368060 | 0.820022 | 8.540894e-53 | -8.615850e-47 |
| Msa1217580 | Msa1368060 | 0.821540 | 3.824133e-53 | -8.615850e-47 |
| Msa1219170 | Msa1368060 | 0.803376 | 3.589807e-49 | -8.615850e-47 |
| Msa0511490 | Msa1368060 | 0.819262 | 1.273928e-52 | -8.615850e-47 |
| Msa0542090 | Msa1368060 | 0.845162 | 4.821981e-59 | -8.615850e-47 |
| Msa0542130 | Msa1368060 | 0.845015 | 5.284883e-59 | -8.615850e-47 |
| Msa0554290 | Msa1368060 | 0.821402 | 4.114734e-53 | -8.615850e-47 |
| Msa0555450 | Msa1368060 | 0.819398 | 1.186258e-52 | -8.615850e-47 |
| Msa0557070 | Msa1368060 | 0.809957 | 1.463690e-50 | -8.615850e-47 |
| Msa0558810 | Msa1368060 | 0.801436 | 9.014137e-49 | -8.615850e-47 |
| Msa0581280 | Msa1368060 | 0.820929 | 5.290420e-53 | -8.615850e-47 |
| Msa0585560 | Msa1368060 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
| Msa0600600 | Msa1368060 | 0.807888 | 4.055944e-50 | -8.615850e-47 |
| Msa0842830 | Msa1368060 | 0.802435 | 5.617072e-49 | -8.615850e-47 |
| Msa0859180 | Msa1368060 | 0.820625 | 6.214717e-53 | -8.615850e-47 |
| Msa0876810 | Msa1368060 | 0.804381 | 2.219710e-49 | -8.615850e-47 |
| Msa0887250 | Msa1368060 | 0.814147 | 1.786003e-51 | -8.615850e-47 |
| Msa0900110 | Msa1368060 | 0.828637 | 8.048464e-55 | -8.615850e-47 |
| Msa0925770 | Msa1368060 | 0.812421 | 4.275610e-51 | -8.615850e-47 |
| Msa0926850 | Msa1368060 | 0.839058 | 1.988620e-57 | -8.615850e-47 |
| Msa0945440 | Msa1368060 | 0.841101 | 5.829015e-58 | -8.615850e-47 |
| Msa0969340 | Msa1368060 | 0.804919 | 1.714330e-49 | -8.615850e-47 |
| Msa0970030 | Msa1368060 | 0.815432 | 9.273979e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368060 | MtrunA17_Chr1g0181141 | 96.684 | 965 | 28 | 3 | 1 | 962 | 1 | 964 | 0.0 | 1883 |
| Msa1368060 | MtrunA17_Chr1g0167361 | 95.445 | 966 | 31 | 7 | 1 | 962 | 1 | 957 | 0.0 | 1838 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368060 | AT1G69070.2 | 51.018 | 933 | 398 | 13 | 25 | 954 | 18 | 894 | 0.0 | 816 |
| Msa1368060 | AT1G69070.1 | 50.804 | 933 | 397 | 14 | 25 | 954 | 18 | 891 | 0.0 | 808 |
Find 197 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGATGATTTCGCCATTCT+TGG | 0.167175 | tig0018581:+217317 | None:intergenic |
| AAACTAAAGAAGAAAGAATT+AGG | 0.178928 | tig0018581:+217403 | None:intergenic |
| TTCGTTCATCACTTCCTTCT+TGG | 0.196187 | tig0018581:+215972 | None:intergenic |
| TCTTCACTACTGACAGTTTC+AGG | 0.214470 | tig0018581:-210580 | Msa1368060:intron |
| CTGCCAGTTATATCATCTTA+TGG | 0.216501 | tig0018581:-210705 | Msa1368060:intron |
| AAAATTGGTGAAAATATTTC+TGG | 0.216827 | tig0018581:+210220 | None:intergenic |
| TGAAGAAACTATGACTAAAA+AGG | 0.225009 | tig0018581:-214866 | Msa1368060:CDS |
| TGCTTTCATGGCTACTGCTT+CGG | 0.243552 | tig0018581:+217229 | None:intergenic |
| GATGAAGGCCTTGATGATTT+TGG | 0.256994 | tig0018581:-216999 | Msa1368060:CDS |
| TCCTCCAACGACTATCTTCT+TGG | 0.257256 | tig0018581:+214471 | None:intergenic |
| TTCAAAGCTTTCATCTTGTT+TGG | 0.273827 | tig0018581:+215726 | None:intergenic |
| GCAGAAGTTGATAAGGTAAA+AGG | 0.285083 | tig0018581:-214574 | Msa1368060:CDS |
| GCTTTCATGGCTACTGCTTC+GGG | 0.299044 | tig0018581:+217230 | None:intergenic |
| TCAAGTAGTAATCTCAAAAT+TGG | 0.299845 | tig0018581:+210205 | None:intergenic |
| TTCGGAGCTTCAATTATATA+AGG | 0.299927 | tig0018581:+214424 | None:intergenic |
| AGAATACTACTTTGAAAGAT+TGG | 0.304400 | tig0018581:-214702 | Msa1368060:CDS |
| ATATCACGGCCAGATGTTAT+TGG | 0.309858 | tig0018581:+213025 | None:intergenic |
| ATCAATAAACTCGGACGATT+TGG | 0.313352 | tig0018581:+217040 | None:intergenic |
| GCACATATTGCAGCAAAGTA+TGG | 0.315156 | tig0018581:+213351 | None:intergenic |
| CTTTCAGCTCGCACACGGTC+TGG | 0.326776 | tig0018581:+209875 | None:intergenic |
| TTTGCAGATATTTCAGATTT+GGG | 0.328110 | tig0018581:-216409 | Msa1368060:intron |
| AAAGTTTGAATAAATACTAT+TGG | 0.330563 | tig0018581:+212026 | None:intergenic |
| TGAATAAATACTATTGGTTC+AGG | 0.334462 | tig0018581:+212032 | None:intergenic |
| TTCTTGATGCAGCTATGTTA+AGG | 0.339589 | tig0018581:-209912 | Msa1368060:intron |
| CAAGAACATGCTTTCAAATC+TGG | 0.340841 | tig0018581:-209692 | Msa1368060:CDS |
| TTCAGTAATTTGATTGGAAC+TGG | 0.357854 | tig0018581:+210055 | None:intergenic |
| ACGTGCCAACCCCATTCTTT+TGG | 0.359535 | tig0018581:+217118 | None:intergenic |
| AAGCATGTTCTTGCTCTTGA+AGG | 0.361044 | tig0018581:+209702 | None:intergenic |
| AAACATCCTTGGTGTTTAGA+AGG | 0.369544 | tig0018581:+209377 | None:intergenic |
| TGACCAACTTGTCAGACAAT+TGG | 0.376534 | tig0018581:-215512 | Msa1368060:CDS |
| CTTCTTCTTCTTGCTGGTGG+TGG | 0.378523 | tig0018581:+217274 | None:intergenic |
| GATGATGATGATATCAGTTC+AGG | 0.380797 | tig0018581:-214670 | Msa1368060:CDS |
| TTAGGATTCAGTAATTTGAT+TGG | 0.384079 | tig0018581:+210049 | None:intergenic |
| AAAATATGCCAAATGCATTA+CGG | 0.387295 | tig0018581:-210168 | Msa1368060:CDS |
| AACTAAAGAAGAAAGAATTA+GGG | 0.390512 | tig0018581:+217404 | None:intergenic |
| GATTTCGCCATTCTTGGGTT+TGG | 0.391028 | tig0018581:+217323 | None:intergenic |
| GACAATGAATAATTCTGTTC+AGG | 0.394333 | tig0018581:-215640 | Msa1368060:intron |
| AGGTAAAAGGATTGAATGTT+GGG | 0.395632 | tig0018581:-214561 | Msa1368060:CDS |
| AGTATCACAGGAGTCATAAC+TGG | 0.397195 | tig0018581:+213076 | None:intergenic |
| AAGGTAAAAGGATTGAATGT+TGG | 0.397569 | tig0018581:-214562 | Msa1368060:CDS |
| AAAGCAAGAGCTGAGAAGTA+TGG | 0.398033 | tig0018581:-209740 | Msa1368060:CDS |
| AAACAAGATGAAAGCTTTGA+AGG | 0.398300 | tig0018581:-215724 | Msa1368060:CDS |
| GGAAGTGTAAAGGGAGATAA+TGG | 0.398968 | tig0018581:-214505 | Msa1368060:CDS |
| ATTACTGAATCCTAAGTTTG+AGG | 0.398976 | tig0018581:-210041 | Msa1368060:CDS |
| GTGAAGAATGGAGAGTCTTC+AGG | 0.403043 | tig0018581:+210596 | None:intergenic |
| GATTCTGTTGGAAGTGTAAA+GGG | 0.404106 | tig0018581:-214514 | Msa1368060:CDS |
| TCTTGATGCAGCTATGTTAA+GGG | 0.404207 | tig0018581:-209911 | Msa1368060:intron |
| CTTTGAAGATGAGATGCTTC+GGG | 0.407003 | tig0018581:-216720 | Msa1368060:CDS |
| GATCCCCACATATTATTTGA+AGG | 0.409851 | tig0018581:-209514 | Msa1368060:three_prime_UTR |
| TCGATGATTTCGCCATTCTT+GGG | 0.414032 | tig0018581:+217318 | None:intergenic |
| GATGAATTTGAAGGAATTGA+TGG | 0.414203 | tig0018581:-216758 | Msa1368060:CDS |
| AAATATGCCAAATGCATTAC+GGG | 0.415102 | tig0018581:-210167 | Msa1368060:CDS |
| TTTGAAGGAATTGATGGTCT+TGG | 0.415825 | tig0018581:-216752 | Msa1368060:CDS |
| TCCGTACTCATCTCTATCAA+TGG | 0.415890 | tig0018581:+213378 | None:intergenic |
| GAGTTTATTGATAGAAGAAT+TGG | 0.416122 | tig0018581:-217029 | Msa1368060:CDS |
| AGGTGAGGCGTGAAGCTAAA+GGG | 0.417578 | tig0018581:-209835 | Msa1368060:CDS |
| CGCTATGTCTCTTGCGATTG+TGG | 0.418991 | tig0018581:-213132 | Msa1368060:CDS |
| CGTAGGAAGTTCGAAGTAAT+GGG | 0.419506 | tig0018581:-217161 | Msa1368060:CDS |
| GAATACTACTTTGAAAGATT+GGG | 0.420352 | tig0018581:-214701 | Msa1368060:CDS |
| TATCACGGCCAGATGTTATT+GGG | 0.421115 | tig0018581:+213026 | None:intergenic |
| TCATCACCAGAGAGAGATCT+TGG | 0.422739 | tig0018581:+214913 | None:intergenic |
| ACAAGTTGGTCATATTCATC+TGG | 0.423674 | tig0018581:+215523 | None:intergenic |
| GAATAAATGTTAAAACTTGT+GGG | 0.424369 | tig0018581:-209627 | Msa1368060:three_prime_UTR |
| TCCTCATTAATGCGCAATAG+TGG | 0.429661 | tig0018581:+210665 | None:intergenic |
| CATAATTCTTCAAAGGTCTT+CGG | 0.431108 | tig0018581:+214406 | None:intergenic |
| TGAGAGAAGAGATGAGGAGG+AGG | 0.431745 | tig0018581:-214824 | Msa1368060:CDS |
| AGGCATTGATATATCCTTGT+AGG | 0.432380 | tig0018581:+210263 | None:intergenic |
| CATAACTGGATGTCTAAAAT+CGG | 0.433346 | tig0018581:+213090 | None:intergenic |
| GACCAACTTGTCAGACAATT+GGG | 0.434843 | tig0018581:-215511 | Msa1368060:CDS |
| AAGAGCTGCAGAAGTTGATA+AGG | 0.435279 | tig0018581:-214581 | Msa1368060:CDS |
| GACGATGATGATGAATTTGA+AGG | 0.438628 | tig0018581:-216767 | Msa1368060:CDS |
| AAATCTGGACAACTAGGAAA+AGG | 0.438682 | tig0018581:-209677 | Msa1368060:CDS |
| ACTTTGAAGATGAGATGCTT+CGG | 0.439081 | tig0018581:-216721 | Msa1368060:CDS |
| TCTCTCCTTCAAATAATATG+TGG | 0.439934 | tig0018581:+209509 | None:intergenic |
| CCAACCCATTCGAGTCAATC+TGG | 0.442365 | tig0018581:-217187 | Msa1368060:CDS |
| AGATAAGGACTTCACTTCTC+TGG | 0.442591 | tig0018581:-215781 | Msa1368060:CDS |
| TATATCATGCGAAAATTCTC+AGG | 0.447408 | tig0018581:-211976 | Msa1368060:intron |
| GATGAAAGCTTTGAAGGCTC+TGG | 0.454907 | tig0018581:-215718 | Msa1368060:CDS |
| AAGAGAACGTCTAGAGGAGT+TGG | 0.457721 | tig0018581:-215425 | Msa1368060:CDS |
| GAGATCGCAGCGCGAACGTC+AGG | 0.458888 | tig0018581:-216964 | Msa1368060:intron |
| CTTGCTGGTGGTGGTTCCGT+TGG | 0.462169 | tig0018581:+217283 | None:intergenic |
| CTCTCCTTCAAATAATATGT+GGG | 0.465901 | tig0018581:+209510 | None:intergenic |
| TGATATATGTTTACTTTCAG+TGG | 0.466596 | tig0018581:+211992 | None:intergenic |
| TCTTAATCATCAATCGGATT+CGG | 0.468845 | tig0018581:-214348 | Msa1368060:CDS |
| TGAATAAATGTTAAAACTTG+TGG | 0.472318 | tig0018581:-209628 | Msa1368060:three_prime_UTR |
| ACGTAGGAAGTTCGAAGTAA+TGG | 0.476055 | tig0018581:-217162 | Msa1368060:CDS |
| GAACGAACTCAAGTTATCAT+AGG | 0.478056 | tig0018581:+210243 | None:intergenic |
| AAAGGAGATACCAAAAGAAT+GGG | 0.479733 | tig0018581:-217128 | Msa1368060:CDS |
| AAGATAGCTTGTCTGCTAAA+CGG | 0.481368 | tig0018581:-215662 | Msa1368060:CDS |
| GAAAGGAGATACCAAAAGAA+TGG | 0.481481 | tig0018581:-217129 | Msa1368060:CDS |
| CTTTGAAGAATTATGTTCAC+TGG | 0.483060 | tig0018581:-214398 | Msa1368060:CDS |
| CTACTTCTTGCTTGATGTGA+AGG | 0.483308 | tig0018581:-209786 | Msa1368060:CDS |
| CTCAAAACCAAACCCAAGAA+TGG | 0.485754 | tig0018581:-217330 | Msa1368060:exon |
| TCATATTCTCAAGAACGAAC+TGG | 0.487217 | tig0018581:+209452 | None:intergenic |
| ACACTATCTTAATCATCAAT+CGG | 0.489425 | tig0018581:-214354 | Msa1368060:CDS |
| ATCCCAATTGTCTGACAAGT+TGG | 0.491655 | tig0018581:+215509 | None:intergenic |
| AAATTGGTGAAAATATTTCT+GGG | 0.493600 | tig0018581:+210221 | None:intergenic |
| GGCATTGATATATCCTTGTA+GGG | 0.493842 | tig0018581:+210264 | None:intergenic |
| GAAGAAGAAGAACAACAAGA+TGG | 0.497085 | tig0018581:-217255 | Msa1368060:CDS |
| TGATTCTGTTGGAAGTGTAA+AGG | 0.497344 | tig0018581:-214515 | Msa1368060:CDS |
| ATGCAGAGTCCAGGGGAAGC+TGG | 0.497735 | tig0018581:-216364 | Msa1368060:CDS |
| TTTCAACTTTAGTTAGTCAC+TGG | 0.500864 | tig0018581:-209426 | Msa1368060:three_prime_UTR |
| TCTTGAGAGAAGAGATGAGG+AGG | 0.501654 | tig0018581:-214827 | Msa1368060:CDS |
| ATGCGTTGCCCAATAACATC+TGG | 0.502843 | tig0018581:-213034 | Msa1368060:CDS |
| GCCACTATTGCGCATTAATG+AGG | 0.509019 | tig0018581:-210666 | Msa1368060:CDS |
| GAGGTGAGGCGTGAAGCTAA+AGG | 0.509324 | tig0018581:-209836 | Msa1368060:CDS |
| TGGTGAAGATTCTGATGATT+CGG | 0.509906 | tig0018581:-214779 | Msa1368060:CDS |
| AAGCTGGTCTAGCTGACGGT+GGG | 0.510032 | tig0018581:-216348 | Msa1368060:CDS |
| AGGTCTGAAGATTCTGATGA+AGG | 0.511371 | tig0018581:-214754 | Msa1368060:CDS |
| GAGAAACCAAGATCTCTCTC+TGG | 0.511990 | tig0018581:-214919 | Msa1368060:CDS |
| GCTCATGGTATGCAGAGTCC+AGG | 0.514901 | tig0018581:-216373 | Msa1368060:CDS |
| CACTTCTCTGGCTCATTCCG+AGG | 0.518270 | tig0018581:-215769 | Msa1368060:CDS |
| CAGATATTTCAGATTTGGGC+CGG | 0.519443 | tig0018581:-216405 | Msa1368060:CDS |
| AATCTGGACAACTAGGAAAA+GGG | 0.524082 | tig0018581:-209676 | Msa1368060:CDS |
| AAACTGTCAGTAGTGAAGAA+TGG | 0.525835 | tig0018581:+210584 | None:intergenic |
| TCAGCTAGACCAGCTTCCCC+TGG | 0.526667 | tig0018581:+216355 | None:intergenic |
| AAGGAATTGATGGTCTTGGA+AGG | 0.527484 | tig0018581:-216748 | Msa1368060:CDS |
| CACATATTGCAGCAAAGTAT+GGG | 0.528243 | tig0018581:+213352 | None:intergenic |
| GCGGCAGAGGGTGGTGGAGA+AGG | 0.528431 | tig0018581:+217352 | None:intergenic |
| GCTTTCAAATCTGGACAACT+AGG | 0.529239 | tig0018581:-209683 | Msa1368060:CDS |
| AACAGACACATAAACATCCT+TGG | 0.529614 | tig0018581:+209366 | None:intergenic |
| AGAATTGGTGAAAATGATGA+AGG | 0.534823 | tig0018581:-217014 | Msa1368060:CDS |
| GACAACAGAAGAGATTGCTC+AGG | 0.535238 | tig0018581:-215452 | Msa1368060:CDS |
| GATAGTCACTTACAAAGTAA+TGG | 0.536245 | tig0018581:+209474 | None:intergenic |
| AGAACGTCTAGAGGAGTTGG+AGG | 0.537126 | tig0018581:-215422 | Msa1368060:intron |
| GGCCGGCGTCATAATGCTCA+TGG | 0.540640 | tig0018581:-216388 | Msa1368060:CDS |
| GTGACCAGATTGACTCGAAT+GGG | 0.542975 | tig0018581:+217183 | None:intergenic |
| AGTCAGAGACAACAAGGCCT+CGG | 0.545810 | tig0018581:+215752 | None:intergenic |
| CTCATGGTATGCAGAGTCCA+GGG | 0.546926 | tig0018581:-216372 | Msa1368060:CDS |
| TCGCACATCAATAGTATCAC+AGG | 0.550865 | tig0018581:+213064 | None:intergenic |
| TGGATGAACATCATACTTTG+AGG | 0.551930 | tig0018581:-210105 | Msa1368060:CDS |
| AGACATAGCGTCTTTGAAGA+AGG | 0.557041 | tig0018581:+213145 | None:intergenic |
| TCTGGCCGTGATATTGCCGT+TGG | 0.558685 | tig0018581:-213016 | Msa1368060:CDS |
| TCTCTCTCTGGTGATGACCT+TGG | 0.559106 | tig0018581:-214907 | Msa1368060:CDS |
| GATACCAAGAAGATAGTCGT+TGG | 0.560935 | tig0018581:-214475 | Msa1368060:CDS |
| CTATCACAGAAAGTAGCAGC+TGG | 0.562254 | tig0018581:-213168 | Msa1368060:intron |
| AACAGAAGAGATTGCTCAGG+AGG | 0.562649 | tig0018581:-215449 | Msa1368060:CDS |
| GGTTAAAGAGACTAGAACAT+CGG | 0.563412 | tig0018581:-209543 | Msa1368060:intron |
| TGAAGAATTATGTTCACTGG+TGG | 0.563978 | tig0018581:-214395 | Msa1368060:CDS |
| TTGAAGGAGAGAAACACAAA+TGG | 0.564988 | tig0018581:-209498 | Msa1368060:three_prime_UTR |
| GGGGAAGCTGGTCTAGCTGA+CGG | 0.571066 | tig0018581:-216352 | Msa1368060:CDS |
| AAGAAGAAGAACAACAAGAT+GGG | 0.572092 | tig0018581:-217254 | Msa1368060:CDS |
| TAGCTTTACCAAAATCATCA+AGG | 0.572384 | tig0018581:+216991 | None:intergenic |
| CCTGCTGGAAGGATTAGATA+AGG | 0.573153 | tig0018581:-215796 | Msa1368060:CDS |
| ACCATTGATAGAGATGAGTA+CGG | 0.573361 | tig0018581:-213379 | Msa1368060:CDS |
| AGATACCAAAAGAATGGGGT+TGG | 0.573911 | tig0018581:-217123 | Msa1368060:CDS |
| CGTGACCAGATTGACTCGAA+TGG | 0.575204 | tig0018581:+217182 | None:intergenic |
| GAAGCTGGTCTAGCTGACGG+TGG | 0.576068 | tig0018581:-216349 | Msa1368060:CDS |
| GATTCTTGAGAGAAGAGATG+AGG | 0.577765 | tig0018581:-214830 | Msa1368060:CDS |
| GTTCTCTTGCTATTGAGAAG+AGG | 0.577774 | tig0018581:-217097 | Msa1368060:CDS |
| AATAAATGTTAAAACTTGTG+GGG | 0.578482 | tig0018581:-209626 | Msa1368060:three_prime_UTR |
| CAAGAGCTGAGAAGTATGGA+AGG | 0.580782 | tig0018581:-209736 | Msa1368060:CDS |
| GATATCAGTTCAGGTTCAGA+AGG | 0.581311 | tig0018581:-214661 | Msa1368060:CDS |
| ACCTCTGTTGAAACCCTACA+AGG | 0.581709 | tig0018581:-210277 | Msa1368060:CDS |
| ACGGGATAAAATTAAAGATG+TGG | 0.582762 | tig0018581:-210149 | Msa1368060:CDS |
| AGTTTCTTCATCGACAGAGA+AGG | 0.583142 | tig0018581:+214879 | None:intergenic |
| TTCACTCGAATCTTCAGCAG+CGG | 0.584454 | tig0018581:+214975 | None:intergenic |
| GGAGGAAAGAGAACGTCTAG+AGG | 0.587808 | tig0018581:-215431 | Msa1368060:CDS |
| GACCACGGGGAGTAAAATGT+TGG | 0.589565 | tig0018581:-209212 | Msa1368060:intron |
| GTTGTCTTCAGCCTATCTGA+AGG | 0.592574 | tig0018581:+215469 | None:intergenic |
| CAGTGAACATAATTCTTCAA+AGG | 0.594264 | tig0018581:+214399 | None:intergenic |
| CCTTATCTAATCCTTCCAGC+AGG | 0.597560 | tig0018581:+215796 | None:intergenic |
| TCTCTTGCGATTGTGGTCCA+TGG | 0.601430 | tig0018581:-213125 | Msa1368060:CDS |
| ATCGGAACATGGAAATACCA+TGG | 0.602060 | tig0018581:+213108 | None:intergenic |
| AATTCTTCTATCAATAAACT+CGG | 0.602106 | tig0018581:+217031 | None:intergenic |
| GAAGATGATGATATCAGTGC+TGG | 0.602350 | tig0018581:-214637 | Msa1368060:CDS |
| TACCATGAGCATTATGACGC+CGG | 0.604868 | tig0018581:+216386 | None:intergenic |
| TCCTTGTAGGGTTTCAACAG+AGG | 0.609177 | tig0018581:+210276 | None:intergenic |
| ACCAAGAAGATAGTCGTTGG+AGG | 0.610706 | tig0018581:-214472 | Msa1368060:CDS |
| AAGAACCAACGGCAATATCA+CGG | 0.614085 | tig0018581:+213011 | None:intergenic |
| GATGAAGATGATGACGAGGA+CGG | 0.614923 | tig0018581:-214607 | Msa1368060:CDS |
| ACAGAGACATAAAACCAAGA+AGG | 0.615445 | tig0018581:-215986 | Msa1368060:intron |
| AAAGATGAAGACCTGCTGGA+AGG | 0.616144 | tig0018581:-215807 | Msa1368060:CDS |
| GGTGAGGCGTGAAGCTAAAG+GGG | 0.618945 | tig0018581:-209834 | Msa1368060:CDS |
| TGGTTCAGTCAGAGACAACA+AGG | 0.620464 | tig0018581:+215746 | None:intergenic |
| TGCGTGCTCGTCCTTCAGAT+AGG | 0.623838 | tig0018581:-215480 | Msa1368060:CDS |
| AGATTCTGATGAAGGATCTG+AGG | 0.625208 | tig0018581:-214746 | Msa1368060:CDS |
| AGGAATTGATGGTCTTGGAA+GGG | 0.625979 | tig0018581:-216747 | Msa1368060:CDS |
| TCTCCTTCAAATAATATGTG+GGG | 0.628876 | tig0018581:+209511 | None:intergenic |
| TCGAAGTAATGGGTCAGAAG+CGG | 0.631084 | tig0018581:-217151 | Msa1368060:CDS |
| AGCTGGTCTAGCTGACGGTG+GGG | 0.637224 | tig0018581:-216347 | Msa1368060:CDS |
| GAGAGAAGAGATGAGGAGGA+GGG | 0.637619 | tig0018581:-214823 | Msa1368060:CDS |
| GGATGTCTAAAATCGGAACA+TGG | 0.639818 | tig0018581:+213097 | None:intergenic |
| AAGATTCTGATGATTCGGAA+AGG | 0.644071 | tig0018581:-214774 | Msa1368060:CDS |
| TCGAAACGCAGCATCGCCAA+CGG | 0.648466 | tig0018581:-217299 | Msa1368060:CDS |
| TGAGCTGATTAAGTTGAAAG+TGG | 0.649315 | tig0018581:-210125 | Msa1368060:CDS |
| GTAATGGGTCAGAAGCGGAA+AGG | 0.654267 | tig0018581:-217146 | Msa1368060:CDS |
| TCTTCTAGTGAAGATGATGA+TGG | 0.654306 | tig0018581:-214799 | Msa1368060:CDS |
| AGAACATAAGAAAGAACCAA+CGG | 0.656060 | tig0018581:+213000 | None:intergenic |
| CCAGATTGACTCGAATGGGT+TGG | 0.666324 | tig0018581:+217187 | None:intergenic |
| GAAGATGATGATGAAACTGA+TGG | 0.670632 | tig0018581:-216698 | Msa1368060:intron |
| CGACAGAGAAGGAATCGCCA+AGG | 0.671556 | tig0018581:+214890 | None:intergenic |
| TCGAGTCAATCTGGTCACGT+AGG | 0.674124 | tig0018581:-217178 | Msa1368060:CDS |
| ATTCATCCTTCTAAACACCA+AGG | 0.684668 | tig0018581:-209383 | Msa1368060:three_prime_UTR |
| TCATGGTATGCAGAGTCCAG+GGG | 0.687360 | tig0018581:-216371 | Msa1368060:CDS |
| AGAAGATGAAGATGATGACG+AGG | 0.691743 | tig0018581:-214611 | Msa1368060:CDS |
| AAGGAGATACCAAAAGAATG+GGG | 0.729442 | tig0018581:-217127 | Msa1368060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAATAAAAAAAA+AGG | + | tig0018581:214311-214330 | None:intergenic | 0.0% |
| !! | AAAAGAAAAAAAAAAAAACA+GGG | + | tig0018581:212747-212766 | None:intergenic | 10.0% |
| !! | AAAAAGAAAAAAAAAAAAAC+AGG | + | tig0018581:212748-212767 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCTTTTTCT+AGG | - | tig0018581:212750-212769 | Msa1368060:intron | 10.0% |
| !!! | AACTTGTTTTAATTAATTTT+AGG | + | tig0018581:212860-212879 | None:intergenic | 10.0% |
| !!! | TTTACTTTTGAATTTTTTAT+AGG | - | tig0018581:213723-213742 | Msa1368060:intron | 10.0% |
| !!! | AAGATTTTAGAATATTAAAT+CGG | - | tig0018581:215268-215287 | Msa1368060:intron | 10.0% |
| !! | TAAACATAATATTAATGATA+TGG | - | tig0018581:215350-215369 | Msa1368060:intron | 10.0% |
| !! | AAAATGCAAAAATAAAGAAA+TGG | + | tig0018581:209212-209231 | None:intergenic | 15.0% |
| !!! | ATTAATTCACAAAATTTTCA+AGG | + | tig0018581:209801-209820 | None:intergenic | 15.0% |
| !! | AAGTTAATTATCAAATTATC+AGG | + | tig0018581:210084-210103 | None:intergenic | 15.0% |
| !!! | TGATAATTTGATAATTAACT+TGG | - | tig0018581:210083-210102 | Msa1368060:CDS | 15.0% |
| !! | TAATATAACAGTTAAAACTT+GGG | + | tig0018581:212501-212520 | None:intergenic | 15.0% |
| !! | TTAATATAACAGTTAAAACT+TGG | + | tig0018581:212502-212521 | None:intergenic | 15.0% |
| !!! | TGTTATATTAAACTTTTATG+TGG | - | tig0018581:212511-212530 | Msa1368060:intron | 15.0% |
| !! | AAAGAAAAAAAAAAAAACAG+GGG | + | tig0018581:212746-212765 | None:intergenic | 15.0% |
| !!! | AATGTTTTCTTGTATTTTAT+TGG | + | tig0018581:212798-212817 | None:intergenic | 15.0% |
| !! | AATTTGAACAAAAAACTTAA+AGG | + | tig0018581:213798-213817 | None:intergenic | 15.0% |
| !!! | TTTAAGTTTTTTGTTCAAAT+TGG | - | tig0018581:213797-213816 | Msa1368060:intron | 15.0% |
| !!! | GTAAGTAATCATTTTTAATA+AGG | + | tig0018581:213961-213980 | None:intergenic | 15.0% |
| !! | TTTGTAACAAAAAAACTTAA+AGG | - | tig0018581:214236-214255 | Msa1368060:intron | 15.0% |
| !! | TATAGATTTACATAAAGAAT+TGG | + | tig0018581:214406-214425 | None:intergenic | 15.0% |
| !! | AAAGTTTGAATAAATACTAT+TGG | + | tig0018581:214630-214649 | None:intergenic | 15.0% |
| !! | TGTTTGTATTTATTTATGTA+TGG | - | tig0018581:214774-214793 | Msa1368060:CDS | 15.0% |
| !!! | AGATTTTAGAATATTAAATC+GGG | - | tig0018581:215269-215288 | Msa1368060:intron | 15.0% |
| !!! | TTCATCCTTTTTTTTTTTTA+CGG | + | tig0018581:215612-215631 | None:intergenic | 15.0% |
| !!! | AAAACTTTTCTCTTATATTT+AGG | - | tig0018581:217419-217438 | Msa1368060:five_prime_UTR | 15.0% |
| !! | AACTAAAGAAGAAAGAATTA+GGG | + | tig0018581:209252-209271 | None:intergenic | 20.0% |
| !! | AAACTAAAGAAGAAAGAATT+AGG | + | tig0018581:209253-209272 | None:intergenic | 20.0% |
| !! | AATTCTTCTATCAATAAACT+CGG | + | tig0018581:209625-209644 | None:intergenic | 20.0% |
| !! | TACCTAATATAACATGTTAA+TGG | - | tig0018581:210005-210024 | Msa1368060:intron | 20.0% |
| !! | AACCATTAACATGTTATATT+AGG | + | tig0018581:210010-210029 | None:intergenic | 20.0% |
| !! | TAAAACAAACAGTATAAACA+TGG | + | tig0018581:210138-210157 | None:intergenic | 20.0% |
| !! | CATTTGTGAAAAGTTTAAAA+AGG | + | tig0018581:210597-210616 | None:intergenic | 20.0% |
| !! | CTTATAAAAAGAAGATATCA+GGG | + | tig0018581:211070-211089 | None:intergenic | 20.0% |
| !! | TCTTATAAAAAGAAGATATC+AGG | + | tig0018581:211071-211090 | None:intergenic | 20.0% |
| !! | ATCCATAATTTCAGAAAAAA+CGG | - | tig0018581:211642-211661 | Msa1368060:intron | 20.0% |
| !! | AAATTGAGAGAAAAAAGAAT+TGG | - | tig0018581:212684-212703 | Msa1368060:intron | 20.0% |
| !!! | AATTTTAGGTGCTATATAAT+GGG | + | tig0018581:212846-212865 | None:intergenic | 20.0% |
| !!! | TAATTTTAGGTGCTATATAA+TGG | + | tig0018581:212847-212866 | None:intergenic | 20.0% |
| !! | TGATATAATCTAGTTAATAG+AGG | - | tig0018581:212894-212913 | Msa1368060:intron | 20.0% |
| !!! | GTTTAATTTGAAAAAGTTCA+TGG | - | tig0018581:212947-212966 | Msa1368060:intron | 20.0% |
| !! | AAGTTCCTCATAAAATATTT+AGG | + | tig0018581:213109-213128 | None:intergenic | 20.0% |
| !! | AATACCTGAAAAGATAAATA+CGG | + | tig0018581:213173-213192 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCAGGTATTTTA+TGG | - | tig0018581:213176-213195 | Msa1368060:intron | 20.0% |
| !! | ATAGTTCTTGATAAAAGTTA+AGG | + | tig0018581:213421-213440 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGAACTATGAAT+TGG | - | tig0018581:213425-213444 | Msa1368060:CDS | 20.0% |
| !! | AAAAAACTTAAAGGACTTAT+TGG | + | tig0018581:213789-213808 | None:intergenic | 20.0% |
| !!! | CAGATATTTTATGACTTAAA+AGG | - | tig0018581:214208-214227 | Msa1368060:intron | 20.0% |
| !! | GTTATAAACATCTAACTTAA+AGG | - | tig0018581:214267-214286 | Msa1368060:intron | 20.0% |
| !!! | CTTTCTAAGATCTTTTTTAT+TGG | - | tig0018581:214469-214488 | Msa1368060:CDS | 20.0% |
| !! | AGAAACTAATTACTGAAAAA+GGG | - | tig0018581:215210-215229 | Msa1368060:intron | 20.0% |
| !! | TGATGAATATCAAACTAATT+TGG | - | tig0018581:215322-215341 | Msa1368060:intron | 20.0% |
| !!! | AGTTAATTAGGTTGTATATT+TGG | + | tig0018581:215549-215568 | None:intergenic | 20.0% |
| !! | ATATCTTATCTGTATTTCAA+GGG | + | tig0018581:215729-215748 | None:intergenic | 20.0% |
| !! | AATATCTTATCTGTATTTCA+AGG | + | tig0018581:215730-215749 | None:intergenic | 20.0% |
| !! | GATATATAATATCATGCATA+TGG | - | tig0018581:215860-215879 | Msa1368060:intron | 20.0% |
| !! | GCTATGATAACAAATATAAA+TGG | + | tig0018581:216214-216233 | None:intergenic | 20.0% |
| !! | AAATTGGTGAAAATATTTCT+GGG | + | tig0018581:216435-216454 | None:intergenic | 20.0% |
| !! | AAAATTGGTGAAAATATTTC+TGG | + | tig0018581:216436-216455 | None:intergenic | 20.0% |
| !! | TGAATAAATGTTAAAACTTG+TGG | - | tig0018581:217025-217044 | Msa1368060:CDS | 20.0% |
| !! | GAATAAATGTTAAAACTTGT+GGG | - | tig0018581:217026-217045 | Msa1368060:CDS | 20.0% |
| !! | AATAAATGTTAAAACTTGTG+GGG | - | tig0018581:217027-217046 | Msa1368060:CDS | 20.0% |
| !! | AGAATGTTCTCTTATATTTA+GGG | + | tig0018581:217319-217338 | None:intergenic | 20.0% |
| !! | AAGAATGTTCTCTTATATTT+AGG | + | tig0018581:217320-217339 | None:intergenic | 20.0% |
| ! | GAGTTTATTGATAGAAGAAT+TGG | - | tig0018581:209624-209643 | Msa1368060:three_prime_UTR | 25.0% |
| !! | TTAATGGTTTATTTGCTGAT+TGG | - | tig0018581:210021-210040 | Msa1368060:intron | 25.0% |
| ! | TTTGAACTCTAATTAGCTAT+TGG | - | tig0018581:210055-210074 | Msa1368060:CDS | 25.0% |
| !! | TTTTGCAGATATTTCAGATT+TGG | - | tig0018581:210243-210262 | Msa1368060:CDS | 25.0% |
| ! | TTTGCAGATATTTCAGATTT+GGG | - | tig0018581:210244-210263 | Msa1368060:CDS | 25.0% |
| ! | ATATTCCAACTTTCTCTTTA+TGG | - | tig0018581:211098-211117 | Msa1368060:intron | 25.0% |
| ! | TGAAGAAACTATGACTAAAA+AGG | - | tig0018581:211787-211806 | Msa1368060:intron | 25.0% |
| ! | GAAGAAACTATGACTAAAAA+GGG | - | tig0018581:211788-211807 | Msa1368060:intron | 25.0% |
| !! | AGAATACTACTTTGAAAGAT+TGG | - | tig0018581:211951-211970 | Msa1368060:intron | 25.0% |
| !! | GAATACTACTTTGAAAGATT+GGG | - | tig0018581:211952-211971 | Msa1368060:intron | 25.0% |
| ! | ACACTATCTTAATCATCAAT+CGG | - | tig0018581:212299-212318 | Msa1368060:intron | 25.0% |
| !! | TATTCCATTTACAATTTTGC+TGG | - | tig0018581:212592-212611 | Msa1368060:intron | 25.0% |
| ! | AAAGAATTGGTCAACATATA+TGG | - | tig0018581:212697-212716 | Msa1368060:intron | 25.0% |
| !!! | ATTTTATTGGTTGTTAAGCA+GGG | + | tig0018581:212785-212804 | None:intergenic | 25.0% |
| !!! | TATTTTATTGGTTGTTAAGC+AGG | + | tig0018581:212786-212805 | None:intergenic | 25.0% |
| ! | ATAATCTAGTTAATAGAGGT+TGG | - | tig0018581:212898-212917 | Msa1368060:intron | 25.0% |
| !!! | AATAGACTAATTTGCTTAGT+TGG | - | tig0018581:213055-213074 | Msa1368060:CDS | 25.0% |
| !! | CTGTTCCTAAATATTTTATG+AGG | - | tig0018581:213101-213120 | Msa1368060:CDS | 25.0% |
| !! | ATAACCGTATTTATCTTTTC+AGG | - | tig0018581:213166-213185 | Msa1368060:intron | 25.0% |
| ! | GTTATAAACGTCTAACTTAA+AGG | + | tig0018581:213767-213786 | None:intergenic | 25.0% |
| ! | TGTAACAGAAAAAAACTTAC+AGG | + | tig0018581:213824-213843 | None:intergenic | 25.0% |
| !! | ACAAAGTTGGTTGAAAAAAT+GGG | + | tig0018581:213884-213903 | None:intergenic | 25.0% |
| !! | AACAAAGTTGGTTGAAAAAA+TGG | + | tig0018581:213885-213904 | None:intergenic | 25.0% |
| ! | TCATGGATCATTTAACATTA+AGG | - | tig0018581:213914-213933 | Msa1368060:intron | 25.0% |
| ! | TGATTTCTACCATTAAAAAG+TGG | - | tig0018581:214373-214392 | Msa1368060:CDS | 25.0% |
| ! | GATTTACATAAAGAATTGGA+AGG | + | tig0018581:214402-214421 | None:intergenic | 25.0% |
| !!! | TGAATAAATACTATTGGTTC+AGG | + | tig0018581:214624-214643 | None:intergenic | 25.0% |
| ! | TGATATATGTTTACTTTCAG+TGG | + | tig0018581:214664-214683 | None:intergenic | 25.0% |
| !! | CATTTTCTTGTATATTCTAC+TGG | - | tig0018581:214946-214965 | Msa1368060:CDS | 25.0% |
| ! | ACTAACGAAAAAGATAAAAG+GGG | + | tig0018581:214974-214993 | None:intergenic | 25.0% |
| ! | CACTAACGAAAAAGATAAAA+GGG | + | tig0018581:214975-214994 | None:intergenic | 25.0% |
| ! | ACACTAACGAAAAAGATAAA+AGG | + | tig0018581:214976-214995 | None:intergenic | 25.0% |
| !! | GAAAAAGAAAATGCTGTTTA+CGG | - | tig0018581:215051-215070 | Msa1368060:intron | 25.0% |
| ! | GAGAAACTAATTACTGAAAA+AGG | - | tig0018581:215209-215228 | Msa1368060:intron | 25.0% |
| ! | GAAACTAATTACTGAAAAAG+GGG | - | tig0018581:215211-215230 | Msa1368060:intron | 25.0% |
| !!! | ATTAAATCGGGTTAGTTTTT+TGG | - | tig0018581:215281-215300 | Msa1368060:intron | 25.0% |
| ! | ATATTAATGATATGGACTTC+TGG | - | tig0018581:215358-215377 | Msa1368060:intron | 25.0% |
| !!! | TAATGAAACACAATTTGTTG+GGG | + | tig0018581:215576-215595 | None:intergenic | 25.0% |
| !! | GTAATGAAACACAATTTGTT+GGG | + | tig0018581:215577-215596 | None:intergenic | 25.0% |
| ! | TGTAATGAAACACAATTTGT+TGG | + | tig0018581:215578-215597 | None:intergenic | 25.0% |
| ! | GATGTCCGTAAAAAAAAAAA+AGG | - | tig0018581:215604-215623 | Msa1368060:intron | 25.0% |
| ! | TGTTTCATAAAACCTTTCAT+TGG | - | tig0018581:215640-215659 | Msa1368060:intron | 25.0% |
| ! | TTCAAAACAACATTAAAGGT+AGG | + | tig0018581:215682-215701 | None:intergenic | 25.0% |
| ! | ACGTTTCAAAACAACATTAA+AGG | + | tig0018581:215686-215705 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTGTGAACTTAA+AGG | + | tig0018581:215780-215799 | None:intergenic | 25.0% |
| ! | CATGATATTATATATCATGC+AGG | + | tig0018581:215856-215875 | None:intergenic | 25.0% |
| !! | GTAACATTTTTCTTGCAAAA+AGG | + | tig0018581:216117-216136 | None:intergenic | 25.0% |
| ! | AGATTGACTACAAAATATCA+TGG | + | tig0018581:216142-216161 | None:intergenic | 25.0% |
| ! | TGATAACAAATATAAATGGC+AGG | + | tig0018581:216210-216229 | None:intergenic | 25.0% |
| ! | CTATGATCTTATAACTGATA+TGG | - | tig0018581:216233-216252 | Msa1368060:intron | 25.0% |
| !!! | GAAATGTTTTTCAAATACTG+TGG | - | tig0018581:216298-216317 | Msa1368060:intron | 25.0% |
| !!! | AATTATGCTTTTTCGATTAC+AGG | - | tig0018581:216338-216357 | Msa1368060:intron | 25.0% |
| !!! | ATTATGCTTTTTCGATTACA+GGG | - | tig0018581:216339-216358 | Msa1368060:intron | 25.0% |
| ! | TCAAGTAGTAATCTCAAAAT+TGG | + | tig0018581:216451-216470 | None:intergenic | 25.0% |
| ! | AAAATATGCCAAATGCATTA+CGG | - | tig0018581:216485-216504 | Msa1368060:intron | 25.0% |
| ! | TTAGGATTCAGTAATTTGAT+TGG | + | tig0018581:216607-216626 | None:intergenic | 25.0% |
| ! | CATATTACCAAATTGAAACA+TGG | + | tig0018581:216659-216678 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATTGAAGAGAG+AGG | - | tig0018581:216798-216817 | Msa1368060:CDS | 25.0% |
| !!! | CGTTTTTTGAATACTAATGT+TGG | - | tig0018581:217089-217108 | Msa1368060:CDS | 25.0% |
| !!! | TAAGAGAACATTCTTTTTTC+AGG | - | tig0018581:217325-217344 | Msa1368060:exon | 25.0% |
| AAGAAGAAGAACAACAAGAT+GGG | - | tig0018581:209399-209418 | Msa1368060:three_prime_UTR | 30.0% | |
| !! | TTTTTGAGCTTTTGCTTTCA+TGG | + | tig0018581:209439-209458 | None:intergenic | 30.0% |
| AAAGGAGATACCAAAAGAAT+GGG | - | tig0018581:209525-209544 | Msa1368060:three_prime_UTR | 30.0% | |
| AGAATTGGTGAAAATGATGA+AGG | - | tig0018581:209639-209658 | Msa1368060:exon | 30.0% | |
| ! | TAGCTTTACCAAAATCATCA+AGG | + | tig0018581:209665-209684 | None:intergenic | 30.0% |
| ! | TTTTCAGAAACAGTTGTCAA+TGG | + | tig0018581:209743-209762 | None:intergenic | 30.0% |
| GATGAATTTGAAGGAATTGA+TGG | - | tig0018581:209895-209914 | Msa1368060:CDS | 30.0% | |
| ! | TTTATTTGCTGATTGGAACT+TGG | - | tig0018581:210028-210047 | Msa1368060:intron | 30.0% |
| ATTTCTGTTTCAGTGACTAT+AGG | - | tig0018581:210549-210568 | Msa1368060:intron | 30.0% | |
| TTTCTGTTTCAGTGACTATA+GGG | - | tig0018581:210550-210569 | Msa1368060:intron | 30.0% | |
| ! | TGCAAAAAGCAAGTTTTACA+AGG | - | tig0018581:210709-210728 | Msa1368060:intron | 30.0% |
| TGTGCGATATTTCTTAAATC+AGG | - | tig0018581:210732-210751 | Msa1368060:intron | 30.0% | |
| GTGCGATATTTCTTAAATCA+GGG | - | tig0018581:210733-210752 | Msa1368060:intron | 30.0% | |
| ! | CTTTCACTCTAATATTTTCC+AGG | - | tig0018581:210800-210819 | Msa1368060:intron | 30.0% |
| TTCAAAGCTTTCATCTTGTT+TGG | + | tig0018581:210930-210949 | None:intergenic | 30.0% | |
| ! | AAACAAGATGAAAGCTTTGA+AGG | - | tig0018581:210929-210948 | Msa1368060:intron | 30.0% |
| GACAATGAATAATTCTGTTC+AGG | - | tig0018581:211013-211032 | Msa1368060:intron | 30.0% | |
| !!! | ATGGTTTAGATGACTTGTTT+TGG | - | tig0018581:211383-211402 | Msa1368060:intron | 30.0% |
| !!! | TGCCGTTTTTTCTGAAATTA+TGG | + | tig0018581:211647-211666 | None:intergenic | 30.0% |
| AAACTATGACTAAAAAGGGT+TGG | - | tig0018581:211792-211811 | Msa1368060:intron | 30.0% | |
| AACTATGACTAAAAAGGGTT+GGG | - | tig0018581:211793-211812 | Msa1368060:intron | 30.0% | |
| AAGGTAAAAGGATTGAATGT+TGG | - | tig0018581:212091-212110 | Msa1368060:intron | 30.0% | |
| AGGTAAAAGGATTGAATGTT+GGG | - | tig0018581:212092-212111 | Msa1368060:intron | 30.0% | |
| GCAAAGAAAAATGATTCTGT+TGG | - | tig0018581:212127-212146 | Msa1368060:intron | 30.0% | |
| TTCGGAGCTTCAATTATATA+AGG | + | tig0018581:212232-212251 | None:intergenic | 30.0% | |
| CATAATTCTTCAAAGGTCTT+CGG | + | tig0018581:212250-212269 | None:intergenic | 30.0% | |
| CAGTGAACATAATTCTTCAA+AGG | + | tig0018581:212257-212276 | None:intergenic | 30.0% | |
| ! | CTTTGAAGAATTATGTTCAC+TGG | - | tig0018581:212255-212274 | Msa1368060:intron | 30.0% |
| TCTTAATCATCAATCGGATT+CGG | - | tig0018581:212305-212324 | Msa1368060:intron | 30.0% | |
| TGCTACAATTATTCCCTATA+GGG | - | tig0018581:212615-212634 | Msa1368060:intron | 30.0% | |
| ! | CAATTTCTACAAGTCTTGTA+GGG | + | tig0018581:212670-212689 | None:intergenic | 30.0% |
| ! | TCAATTTCTACAAGTCTTGT+AGG | + | tig0018581:212671-212690 | None:intergenic | 30.0% |
| !! | TTTTATTGGTTGTTAAGCAG+GGG | + | tig0018581:212784-212803 | None:intergenic | 30.0% |
| ! | TAAATCTGAGTATTGCAAAC+TGG | + | tig0018581:213036-213055 | None:intergenic | 30.0% |
| !!! | ATTGCAGTATTTTGCTGTTT+TGG | - | tig0018581:213205-213224 | Msa1368060:intron | 30.0% |
| ! | CATAACTGGATGTCTAAAAT+CGG | + | tig0018581:213566-213585 | None:intergenic | 30.0% |
| AGAACATAAGAAAGAACCAA+CGG | + | tig0018581:213656-213675 | None:intergenic | 30.0% | |
| TGAGCACTATTTAACAAAGT+TGG | + | tig0018581:213897-213916 | None:intergenic | 30.0% | |
| ACTTTGTTAAATAGTGCTCA+TGG | - | tig0018581:213897-213916 | Msa1368060:intron | 30.0% | |
| TGGATCATTTAACATTAAGG+TGG | - | tig0018581:213917-213936 | Msa1368060:intron | 30.0% | |
| TCATTTAACATTAAGGTGGT+AGG | - | tig0018581:213921-213940 | Msa1368060:intron | 30.0% | |
| GTGGACATTTAATCTTAAGT+TGG | + | tig0018581:214144-214163 | None:intergenic | 30.0% | |
| GTTATCACCATTCATCAATA+AGG | - | tig0018581:214332-214351 | Msa1368060:CDS | 30.0% | |
| ATCAGATCCTTATTGATGAA+TGG | + | tig0018581:214342-214361 | None:intergenic | 30.0% | |
| TTATATTCATTGTGTGAGCA+AGG | + | tig0018581:214567-214586 | None:intergenic | 30.0% | |
| ACACAATGAATATAAAACGC+AGG | - | tig0018581:214572-214591 | Msa1368060:CDS | 30.0% | |
| TATATCATGCGAAAATTCTC+AGG | - | tig0018581:214677-214696 | Msa1368060:CDS | 30.0% | |
| TAAATACAAACATATGCGCA+TGG | + | tig0018581:214766-214785 | None:intergenic | 30.0% | |
| ! | ACAGCATTTTCTTTTTCTAC+TGG | + | tig0018581:215048-215067 | None:intergenic | 30.0% |
| ATAATTTCCATTAGAGACGT+AGG | + | tig0018581:215183-215202 | None:intergenic | 30.0% | |
| CTCTAATGGAAATTATGCTA+AGG | - | tig0018581:215187-215206 | Msa1368060:intron | 30.0% | |
| !! | AGTTGATTCAACTTTTCTTG+TGG | - | tig0018581:215451-215470 | Msa1368060:CDS | 30.0% |
| TAATATTAAGTGCGAGATCT+TGG | + | tig0018581:215515-215534 | None:intergenic | 30.0% | |
| TGTTGGGGTAAAAGTTAATT+AGG | + | tig0018581:215561-215580 | None:intergenic | 30.0% | |
| !! | ACTGTTTTTCATCCAATGAA+AGG | + | tig0018581:215655-215674 | None:intergenic | 30.0% |
| TTTCATTGGATGAAAAACAG+TGG | - | tig0018581:215654-215673 | Msa1368060:CDS | 30.0% | |
| ATTATCCAACCATAACATTC+TGG | + | tig0018581:215906-215925 | None:intergenic | 30.0% | |
| GTTCCATAAGATGATATAAC+TGG | + | tig0018581:215954-215973 | None:intergenic | 30.0% | |
| GCAAAAAGGTGGTAATAAAT+TGG | + | tig0018581:216103-216122 | None:intergenic | 30.0% | |
| ! | ACATTTTTCTTGCAAAAAGG+TGG | + | tig0018581:216114-216133 | None:intergenic | 30.0% |
| AAATATGCCAAATGCATTAC+GGG | - | tig0018581:216486-216505 | Msa1368060:intron | 30.0% | |
| ! | ATTTTATCCCGTAATGCATT+TGG | + | tig0018581:216496-216515 | None:intergenic | 30.0% |
| ACGGGATAAAATTAAAGATG+TGG | - | tig0018581:216504-216523 | Msa1368060:intron | 30.0% | |
| !!! | TTTTGTTTTCGCATTTGAAG+TGG | + | tig0018581:216577-216596 | None:intergenic | 30.0% |
| TTCAGTAATTTGATTGGAAC+TGG | + | tig0018581:216601-216620 | None:intergenic | 30.0% | |
| ATTACTGAATCCTAAGTTTG+AGG | - | tig0018581:216612-216631 | Msa1368060:intron | 30.0% | |
| !! | ACTTACTTTTCCTCAAACTT+AGG | + | tig0018581:216625-216644 | None:intergenic | 30.0% |
| ATTGAAACATGGAAAACAGA+AGG | + | tig0018581:216648-216667 | None:intergenic | 30.0% | |
| ! | CTGTTTTCCATGTTTCAATT+TGG | - | tig0018581:216649-216668 | Msa1368060:intron | 30.0% |
| TTGATGTGAAGGAAAAAGAA+AGG | - | tig0018581:216878-216897 | Msa1368060:intron | 30.0% | |
| GGAAAAAGAAAGGTCTTTAA+TGG | - | tig0018581:216888-216907 | Msa1368060:intron | 30.0% | |
| TCTCCTTCAAATAATATGTG+GGG | + | tig0018581:217145-217164 | None:intergenic | 30.0% | |
| CTCTCCTTCAAATAATATGT+GGG | + | tig0018581:217146-217165 | None:intergenic | 30.0% | |
| TCTCTCCTTCAAATAATATG+TGG | + | tig0018581:217147-217166 | None:intergenic | 30.0% | |
| GATAGTCACTTACAAAGTAA+TGG | + | tig0018581:217182-217201 | None:intergenic | 30.0% | |
| TTTCAACTTTAGTTAGTCAC+TGG | - | tig0018581:217227-217246 | Msa1368060:CDS | 30.0% | |
| ! | TTCTCTTATATTTAGGACCA+CGG | - | tig0018581:217426-217445 | Msa1368060:five_prime_UTR | 30.0% |
| GAAGAAGAAGAACAACAAGA+TGG | - | tig0018581:209398-209417 | Msa1368060:three_prime_UTR | 35.0% | |
| GAAAGGAGATACCAAAAGAA+TGG | - | tig0018581:209524-209543 | Msa1368060:three_prime_UTR | 35.0% | |
| AAGGAGATACCAAAAGAATG+GGG | - | tig0018581:209526-209545 | Msa1368060:three_prime_UTR | 35.0% | |
| ATCAATAAACTCGGACGATT+TGG | + | tig0018581:209616-209635 | None:intergenic | 35.0% | |
| ! | GACGATGATGATGAATTTGA+AGG | - | tig0018581:209886-209905 | Msa1368060:CDS | 35.0% |
| ! | TTTGAAGGAATTGATGGTCT+TGG | - | tig0018581:209901-209920 | Msa1368060:CDS | 35.0% |
| ! | ACTTTGAAGATGAGATGCTT+CGG | - | tig0018581:209932-209951 | Msa1368060:intron | 35.0% |
| ! | GAAGATGATGATGAAACTGA+TGG | - | tig0018581:209955-209974 | Msa1368060:intron | 35.0% |
| CGTCACAAAAATAACACAAC+AGG | + | tig0018581:210203-210222 | None:intergenic | 35.0% | |
| !! | TAGATTACAGAAAGCACTCA+TGG | + | tig0018581:210376-210395 | None:intergenic | 35.0% |
| TCTCTCTTATGCCAATTTGA+GGG | + | tig0018581:210442-210461 | None:intergenic | 35.0% | |
| TTCTCTCTTATGCCAATTTG+AGG | + | tig0018581:210443-210462 | None:intergenic | 35.0% | |
| GTCACTGAAACAGAAATAAC+TGG | + | tig0018581:210546-210565 | None:intergenic | 35.0% | |
| !!! | TCTTGGTTTTATGTCTCTGT+AGG | + | tig0018581:210667-210686 | None:intergenic | 35.0% |
| ACAGAGACATAAAACCAAGA+AGG | - | tig0018581:210667-210686 | Msa1368060:CDS | 35.0% | |
| !!! | TTTCTTTTGCTTTTTCAGCC+TGG | + | tig0018581:210821-210840 | None:intergenic | 35.0% |
| GGCTGAAAAAGCAAAAGAAA+AGG | - | tig0018581:210821-210840 | Msa1368060:intron | 35.0% | |
| ! | AAGATAGCTTGTCTGCTAAA+CGG | - | tig0018581:210991-211010 | Msa1368060:intron | 35.0% |
| GTACCATTATTTATCCTCGA+GGG | - | tig0018581:211035-211054 | Msa1368060:intron | 35.0% | |
| !! | ACAAGTTGGTCATATTCATC+TGG | + | tig0018581:211133-211152 | None:intergenic | 35.0% |
| GATTAACTGATCTCCAATCT+TGG | - | tig0018581:211335-211354 | Msa1368060:intron | 35.0% | |
| CTCAGATATACAACCAAGAT+TGG | + | tig0018581:211351-211370 | None:intergenic | 35.0% | |
| !!! | ATCTGAGCTTCGTTTTAAGA+TGG | - | tig0018581:211364-211383 | Msa1368060:intron | 35.0% |
| TTTGGCCAAAGTGTATAAAC+AGG | - | tig0018581:211401-211420 | Msa1368060:intron | 35.0% | |
| TTGGCCAAAGTGTATAAACA+GGG | - | tig0018581:211402-211421 | Msa1368060:intron | 35.0% | |
| TCATCCCTGTTTATACACTT+TGG | + | tig0018581:211409-211428 | None:intergenic | 35.0% | |
| ! | GCATTAAGCTAGGTAGTTTT+GGG | + | tig0018581:211433-211452 | None:intergenic | 35.0% |
| ! | TGCATTAAGCTAGGTAGTTT+TGG | + | tig0018581:211434-211453 | None:intergenic | 35.0% |
| AAAACTACCTAGCTTAATGC+AGG | - | tig0018581:211433-211452 | Msa1368060:intron | 35.0% | |
| ! | TTGGTGATAGTCATGGAAAT+GGG | - | tig0018581:211552-211571 | Msa1368060:intron | 35.0% |
| ! | GATCTTGGTTTCTCTTTTGA+TGG | + | tig0018581:211728-211747 | None:intergenic | 35.0% |
| TCTTCTAGTGAAGATGATGA+TGG | - | tig0018581:211854-211873 | Msa1368060:intron | 35.0% | |
| TGGTGAAGATTCTGATGATT+CGG | - | tig0018581:211874-211893 | Msa1368060:intron | 35.0% | |
| ! | AAGATTCTGATGATTCGGAA+AGG | - | tig0018581:211879-211898 | Msa1368060:intron | 35.0% |
| ! | GATGATGATGATATCAGTTC+AGG | - | tig0018581:211983-212002 | Msa1368060:CDS | 35.0% |
| !! | GCAGAAGTTGATAAGGTAAA+AGG | - | tig0018581:212079-212098 | Msa1368060:intron | 35.0% |
| ! | TGATTCTGTTGGAAGTGTAA+AGG | - | tig0018581:212138-212157 | Msa1368060:intron | 35.0% |
| ! | GATTCTGTTGGAAGTGTAAA+GGG | - | tig0018581:212139-212158 | Msa1368060:intron | 35.0% |
| AGGAAAAATGTCGAAAGAGT+TGG | - | tig0018581:212201-212220 | Msa1368060:intron | 35.0% | |
| TGAAGAATTATGTTCACTGG+TGG | - | tig0018581:212258-212277 | Msa1368060:intron | 35.0% | |
| !!! | TGTTTTGATCCATATCTCCT+TGG | - | tig0018581:212405-212424 | Msa1368060:intron | 35.0% |
| AAACATGAATACAAGCACCA+AGG | + | tig0018581:212425-212444 | None:intergenic | 35.0% | |
| AGCACCAGCAAAATTGTAAA+TGG | + | tig0018581:212599-212618 | None:intergenic | 35.0% | |
| GTGCTACAATTATTCCCTAT+AGG | - | tig0018581:212614-212633 | Msa1368060:intron | 35.0% | |
| GCTACAATTATTCCCTATAG+GGG | - | tig0018581:212616-212635 | Msa1368060:intron | 35.0% | |
| ATATATGGTACACAGCTAAC+AGG | - | tig0018581:212712-212731 | Msa1368060:intron | 35.0% | |
| TATATGGTACACAGCTAACA+GGG | - | tig0018581:212713-212732 | Msa1368060:intron | 35.0% | |
| GTTGTCATTGATGTATTGCA+TGG | - | tig0018581:212925-212944 | Msa1368060:intron | 35.0% | |
| AAAAGAATGCAAACAACCAC+AGG | + | tig0018581:213002-213021 | None:intergenic | 35.0% | |
| ! | TGAGTATTGCAAACTGGATT+GGG | + | tig0018581:213030-213049 | None:intergenic | 35.0% |
| ACCATTGATAGAGATGAGTA+CGG | - | tig0018581:213274-213293 | Msa1368060:intron | 35.0% | |
| CACATATTGCAGCAAAGTAT+GGG | + | tig0018581:213304-213323 | None:intergenic | 35.0% | |
| ! | GTTGAGAGTATAAAAAACGC+AGG | - | tig0018581:213359-213378 | Msa1368060:CDS | 35.0% |
| GATAAAAGTTAAGGCAGAGA+CGG | + | tig0018581:213412-213431 | None:intergenic | 35.0% | |
| !! | CACATGCACACTTTTTAACT+GGG | - | tig0018581:214161-214180 | Msa1368060:intron | 35.0% |
| CTACTAATGAATTTAGCCTC+TGG | - | tig0018581:214440-214459 | Msa1368060:CDS | 35.0% | |
| CAACGAAAAACATAGGTCAA+AGG | + | tig0018581:214530-214549 | None:intergenic | 35.0% | |
| ! | TGACCTATGTTTTTCGTTGA+TGG | - | tig0018581:214531-214550 | Msa1368060:CDS | 35.0% |
| ATGCCATCAACGAAAAACAT+AGG | + | tig0018581:214537-214556 | None:intergenic | 35.0% | |
| TCATCTCATCCAACTAAGTT+TGG | + | tig0018581:214837-214856 | None:intergenic | 35.0% | |
| AATGATTAGCACTAGGGTTA+AGG | + | tig0018581:214885-214904 | None:intergenic | 35.0% | |
| GACAACAATGATTAGCACTA+GGG | + | tig0018581:214891-214910 | None:intergenic | 35.0% | |
| ATCATTGTTGTCGAACAAAC+TGG | - | tig0018581:214899-214918 | Msa1368060:CDS | 35.0% | |
| GTTTACGGAAGCAAATAATG+AGG | - | tig0018581:215066-215085 | Msa1368060:intron | 35.0% | |
| ! | AAAGGTGCATTGTCTTATGT+GGG | - | tig0018581:215089-215108 | Msa1368060:intron | 35.0% |
| !!! | CGGGTTAGTTTTTTGGAATT+TGG | - | tig0018581:215288-215307 | Msa1368060:intron | 35.0% |
| ! | TTGTGAACTTAAAGGTACAC+TGG | + | tig0018581:215772-215791 | None:intergenic | 35.0% |
| TCTTCGCTTTCTTGTATTTG+AGG | - | tig0018581:215797-215816 | Msa1368060:CDS | 35.0% | |
| CTGGCAGAAAACAAACAATA+TGG | + | tig0018581:215935-215954 | None:intergenic | 35.0% | |
| CTGCCAGTTATATCATCTTA+TGG | - | tig0018581:215948-215967 | Msa1368060:CDS | 35.0% | |
| AAACTGTCAGTAGTGAAGAA+TGG | + | tig0018581:216072-216091 | None:intergenic | 35.0% | |
| !! | GGCATTGATATATCCTTGTA+GGG | + | tig0018581:216392-216411 | None:intergenic | 35.0% |
| !! | AGGCATTGATATATCCTTGT+AGG | + | tig0018581:216393-216412 | None:intergenic | 35.0% |
| GAACGAACTCAAGTTATCAT+AGG | + | tig0018581:216413-216432 | None:intergenic | 35.0% | |
| !! | TGAGCTGATTAAGTTGAAAG+TGG | - | tig0018581:216528-216547 | Msa1368060:intron | 35.0% |
| TGGATGAACATCATACTTTG+AGG | - | tig0018581:216548-216567 | Msa1368060:intron | 35.0% | |
| TTCTTGATGCAGCTATGTTA+AGG | - | tig0018581:216741-216760 | Msa1368060:CDS | 35.0% | |
| TCTTGATGCAGCTATGTTAA+GGG | - | tig0018581:216742-216761 | Msa1368060:CDS | 35.0% | |
| AAAAATTGAAGAGAGAGGTG+AGG | - | tig0018581:216803-216822 | Msa1368060:CDS | 35.0% | |
| CAAGAACATGCTTTCAAATC+TGG | - | tig0018581:216961-216980 | Msa1368060:intron | 35.0% | |
| AAATCTGGACAACTAGGAAA+AGG | - | tig0018581:216976-216995 | Msa1368060:CDS | 35.0% | |
| AATCTGGACAACTAGGAAAA+GGG | - | tig0018581:216977-216996 | Msa1368060:CDS | 35.0% | |
| GGTTAAAGAGACTAGAACAT+CGG | - | tig0018581:217110-217129 | Msa1368060:CDS | 35.0% | |
| GATCCCCACATATTATTTGA+AGG | - | tig0018581:217139-217158 | Msa1368060:CDS | 35.0% | |
| TTGAAGGAGAGAAACACAAA+TGG | - | tig0018581:217155-217174 | Msa1368060:CDS | 35.0% | |
| TCATATTCTCAAGAACGAAC+TGG | + | tig0018581:217204-217223 | None:intergenic | 35.0% | |
| ATTCATCCTTCTAAACACCA+AGG | - | tig0018581:217270-217289 | Msa1368060:CDS | 35.0% | |
| !! | AAACATCCTTGGTGTTTAGA+AGG | + | tig0018581:217279-217298 | None:intergenic | 35.0% |
| AACAGACACATAAACATCCT+TGG | + | tig0018581:217290-217309 | None:intergenic | 35.0% | |
| ! | TCTCTTATATTTAGGACCAC+GGG | - | tig0018581:217427-217446 | Msa1368060:five_prime_UTR | 35.0% |
| !!! | TTCTTGGGTTTGGTTTTGAG+CGG | + | tig0018581:209323-209342 | None:intergenic | 40.0% |
| CTCAAAACCAAACCCAAGAA+TGG | - | tig0018581:209323-209342 | Msa1368060:intron | 40.0% | |
| TCGATGATTTCGCCATTCTT+GGG | + | tig0018581:209338-209357 | None:intergenic | 40.0% | |
| TTCGATGATTTCGCCATTCT+TGG | + | tig0018581:209339-209358 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCTTCTTGC+TGG | + | tig0018581:209388-209407 | None:intergenic | 40.0% | |
| ACGTAGGAAGTTCGAAGTAA+TGG | - | tig0018581:209491-209510 | Msa1368060:three_prime_UTR | 40.0% | |
| CGTAGGAAGTTCGAAGTAAT+GGG | - | tig0018581:209492-209511 | Msa1368060:three_prime_UTR | 40.0% | |
| AGATACCAAAAGAATGGGGT+TGG | - | tig0018581:209530-209549 | Msa1368060:three_prime_UTR | 40.0% | |
| !! | GTTCTCTTGCTATTGAGAAG+AGG | - | tig0018581:209556-209575 | Msa1368060:intron | 40.0% |
| !! | GATGAAGGCCTTGATGATTT+TGG | - | tig0018581:209654-209673 | Msa1368060:exon | 40.0% |
| ! | AAGGAATTGATGGTCTTGGA+AGG | - | tig0018581:209905-209924 | Msa1368060:intron | 40.0% |
| ! | AGGAATTGATGGTCTTGGAA+GGG | - | tig0018581:209906-209925 | Msa1368060:intron | 40.0% |
| ! | CTTTGAAGATGAGATGCTTC+GGG | - | tig0018581:209933-209952 | Msa1368060:intron | 40.0% |
| CAGATATTTCAGATTTGGGC+CGG | - | tig0018581:210248-210267 | Msa1368060:CDS | 40.0% | |
| TTCCCTAAAGTCACAGTAAC+AGG | + | tig0018581:210343-210362 | None:intergenic | 40.0% | |
| CTAAACTAACCCCCTCAAAT+TGG | - | tig0018581:210428-210447 | Msa1368060:intron | 40.0% | |
| TCTCTTATGCCAATTTGAGG+GGG | + | tig0018581:210440-210459 | None:intergenic | 40.0% | |
| CTCTCTTATGCCAATTTGAG+GGG | + | tig0018581:210441-210460 | None:intergenic | 40.0% | |
| AGAATCGAACCTAAGACCTT+GGG | - | tig0018581:210459-210478 | Msa1368060:intron | 40.0% | |
| ACTGGTAGATTAACCCACTT+GGG | + | tig0018581:210528-210547 | None:intergenic | 40.0% | |
| AACTGGTAGATTAACCCACT+TGG | + | tig0018581:210529-210548 | None:intergenic | 40.0% | |
| !! | GCTTTGAAGCTATTTCTGAC+TGG | - | tig0018581:210633-210652 | Msa1368060:CDS | 40.0% |
| TTCGTTCATCACTTCCTTCT+TGG | + | tig0018581:210684-210703 | None:intergenic | 40.0% | |
| AGATAAGGACTTCACTTCTC+TGG | - | tig0018581:210872-210891 | Msa1368060:intron | 40.0% | |
| GGTACCATTATTTATCCTCG+AGG | - | tig0018581:211034-211053 | Msa1368060:intron | 40.0% | |
| GAACCCTCGAGGATAAATAA+TGG | + | tig0018581:211041-211060 | None:intergenic | 40.0% | |
| TCCAACTTTCTCTTTATGGC+AGG | - | tig0018581:211102-211121 | Msa1368060:intron | 40.0% | |
| TCCTGCCATAAAGAGAAAGT+TGG | + | tig0018581:211106-211125 | None:intergenic | 40.0% | |
| TGACCAACTTGTCAGACAAT+TGG | - | tig0018581:211141-211160 | Msa1368060:intron | 40.0% | |
| GACCAACTTGTCAGACAATT+GGG | - | tig0018581:211142-211161 | Msa1368060:intron | 40.0% | |
| ATCCCAATTGTCTGACAAGT+TGG | + | tig0018581:211147-211166 | None:intergenic | 40.0% | |
| CATCAATCCTGCATTAAGCT+AGG | + | tig0018581:211443-211462 | None:intergenic | 40.0% | |
| TATAGTGTACTAGTGAGCCT+CGG | - | tig0018581:211484-211503 | Msa1368060:intron | 40.0% | |
| ! | CTTGGTGATAGTCATGGAAA+TGG | - | tig0018581:211551-211570 | Msa1368060:intron | 40.0% |
| ! | AATTTTACTCCCATGTGCAG+CGG | + | tig0018581:211579-211598 | None:intergenic | 40.0% |
| TGCACATGGGAGTAAAATTG+TGG | - | tig0018581:211580-211599 | Msa1368060:intron | 40.0% | |
| AGTTTCTTCATCGACAGAGA+AGG | + | tig0018581:211777-211796 | None:intergenic | 40.0% | |
| GATTCTTGAGAGAAGAGATG+AGG | - | tig0018581:211823-211842 | Msa1368060:intron | 40.0% | |
| AGGTCTGAAGATTCTGATGA+AGG | - | tig0018581:211899-211918 | Msa1368060:intron | 40.0% | |
| AGATTCTGATGAAGGATCTG+AGG | - | tig0018581:211907-211926 | Msa1368060:intron | 40.0% | |
| ! | GATATCAGTTCAGGTTCAGA+AGG | - | tig0018581:211992-212011 | Msa1368060:CDS | 40.0% |
| GAAGATGATGATATCAGTGC+TGG | - | tig0018581:212016-212035 | Msa1368060:CDS | 40.0% | |
| ! | AGAAGATGAAGATGATGACG+AGG | - | tig0018581:212042-212061 | Msa1368060:CDS | 40.0% |
| !! | AAGAGCTGCAGAAGTTGATA+AGG | - | tig0018581:212072-212091 | Msa1368060:intron | 40.0% |
| ! | GGAAGTGTAAAGGGAGATAA+TGG | - | tig0018581:212148-212167 | Msa1368060:intron | 40.0% |
| GATACCAAGAAGATAGTCGT+TGG | - | tig0018581:212178-212197 | Msa1368060:intron | 40.0% | |
| ! | TTTTCTGCAGCAAGTGTGAT+CGG | + | tig0018581:212340-212359 | None:intergenic | 40.0% |
| ATACAAGCACCAAGGAGATA+TGG | + | tig0018581:212417-212436 | None:intergenic | 40.0% | |
| TTCTGGTGTAAAACAGTTGG+TGG | + | tig0018581:212455-212474 | None:intergenic | 40.0% | |
| CACTTCTGGTGTAAAACAGT+TGG | + | tig0018581:212458-212477 | None:intergenic | 40.0% | |
| ACAGTAATCAGTCCCCTATA+GGG | + | tig0018581:212631-212650 | None:intergenic | 40.0% | |
| AACAGTAATCAGTCCCCTAT+AGG | + | tig0018581:212632-212651 | None:intergenic | 40.0% | |
| ATATGGTACACAGCTAACAG+GGG | - | tig0018581:212714-212733 | Msa1368060:intron | 40.0% | |
| ! | CTGAGTATTGCAAACTGGAT+TGG | + | tig0018581:213031-213050 | None:intergenic | 40.0% |
| TCCGTACTCATCTCTATCAA+TGG | + | tig0018581:213278-213297 | None:intergenic | 40.0% | |
| GCACATATTGCAGCAAAGTA+TGG | + | tig0018581:213305-213324 | None:intergenic | 40.0% | |
| ! | AGACATAGCGTCTTTGAAGA+AGG | + | tig0018581:213511-213530 | None:intergenic | 40.0% |
| ATCGGAACATGGAAATACCA+TGG | + | tig0018581:213548-213567 | None:intergenic | 40.0% | |
| ! | GGATGTCTAAAATCGGAACA+TGG | + | tig0018581:213559-213578 | None:intergenic | 40.0% |
| AGTATCACAGGAGTCATAAC+TGG | + | tig0018581:213580-213599 | None:intergenic | 40.0% | |
| TCGCACATCAATAGTATCAC+AGG | + | tig0018581:213592-213611 | None:intergenic | 40.0% | |
| TATCACGGCCAGATGTTATT+GGG | + | tig0018581:213630-213649 | None:intergenic | 40.0% | |
| ATATCACGGCCAGATGTTAT+TGG | + | tig0018581:213631-213650 | None:intergenic | 40.0% | |
| AAGAACCAACGGCAATATCA+CGG | + | tig0018581:213645-213664 | None:intergenic | 40.0% | |
| TATAGGCCAAATATCTTCCG+CGG | - | tig0018581:213740-213759 | Msa1368060:intron | 40.0% | |
| CTCTCAAAACAAGGGTTCAT+AGG | + | tig0018581:214104-214123 | None:intergenic | 40.0% | |
| ACTCATCGCTCTCAAAACAA+GGG | + | tig0018581:214112-214131 | None:intergenic | 40.0% | |
| AACTCATCGCTCTCAAAACA+AGG | + | tig0018581:214113-214132 | None:intergenic | 40.0% | |
| !!! | TGTTTTGAGAGCGATGAGTT+TGG | - | tig0018581:214113-214132 | Msa1368060:intron | 40.0% |
| ! | CCAGTTAAAAAGTGTGCATG+TGG | + | tig0018581:214163-214182 | None:intergenic | 40.0% |
| !! | CCACATGCACACTTTTTAAC+TGG | - | tig0018581:214160-214179 | Msa1368060:intron | 40.0% |
| CTAACTTAAAGGACTGCAGA+TGG | - | tig0018581:214278-214297 | Msa1368060:intron | 40.0% | |
| AAAGGACTGCAGATGGTATT+TGG | - | tig0018581:214285-214304 | Msa1368060:intron | 40.0% | |
| !!! | GGAAGGATGCCACTTTTTAA+TGG | + | tig0018581:214385-214404 | None:intergenic | 40.0% |
| AGACGCTAACATACAAGATG+AGG | + | tig0018581:214813-214832 | None:intergenic | 40.0% | |
| TAGCGTCTTCCAAACTTAGT+TGG | - | tig0018581:214825-214844 | Msa1368060:CDS | 40.0% | |
| AGCACTAGGGTTAAGGAATT+TGG | + | tig0018581:214878-214897 | None:intergenic | 40.0% | |
| CGACAACAATGATTAGCACT+AGG | + | tig0018581:214892-214911 | None:intergenic | 40.0% | |
| CGGAAGCAAATAATGAGGAA+AGG | - | tig0018581:215071-215090 | Msa1368060:intron | 40.0% | |
| ! | GAAAGGTGCATTGTCTTATG+TGG | - | tig0018581:215088-215107 | Msa1368060:intron | 40.0% |
| ATTCAGCTAGCAAATCAACG+AGG | + | tig0018581:215123-215142 | None:intergenic | 40.0% | |
| TAAGCAGAGATCAGGTAGTA+AGG | + | tig0018581:215159-215178 | None:intergenic | 40.0% | |
| TGCTTAACCTACGTCTCTAA+TGG | - | tig0018581:215173-215192 | Msa1368060:intron | 40.0% | |
| AGGCTGTGCAAGGTTTAAAT+GGG | - | tig0018581:215243-215262 | Msa1368060:intron | 40.0% | |
| TATCATGCAGGAACTAGCTA+AGG | + | tig0018581:215844-215863 | None:intergenic | 40.0% | |
| !! | TATGGTGCTGTACTTCATGA+TGG | - | tig0018581:215878-215897 | Msa1368060:intron | 40.0% |
| ATGATGGCACCAGAATGTTA+TGG | - | tig0018581:215894-215913 | Msa1368060:intron | 40.0% | |
| TCCTCATTAATGCGCAATAG+TGG | + | tig0018581:215991-216010 | None:intergenic | 40.0% | |
| TCTTCACTACTGACAGTTTC+AGG | - | tig0018581:216073-216092 | Msa1368060:intron | 40.0% | |
| TATGGATGCAGCTAATGTTG+AGG | - | tig0018581:216251-216270 | Msa1368060:intron | 40.0% | |
| TTAGCCAGTCAGATCAGAAA+GGG | - | tig0018581:216684-216703 | Msa1368060:intron | 40.0% | |
| ! | TTTTTCTTTCAGCTCGCACA+CGG | + | tig0018581:216786-216805 | None:intergenic | 40.0% |
| CTACTTCTTGCTTGATGTGA+AGG | - | tig0018581:216867-216886 | Msa1368060:intron | 40.0% | |
| AAAGCAAGAGCTGAGAAGTA+TGG | - | tig0018581:216913-216932 | Msa1368060:intron | 40.0% | |
| AAGCATGTTCTTGCTCTTGA+AGG | + | tig0018581:216954-216973 | None:intergenic | 40.0% | |
| GCTTTCAAATCTGGACAACT+AGG | - | tig0018581:216970-216989 | Msa1368060:CDS | 40.0% | |
| ! | CTCTTATATTTAGGACCACG+GGG | - | tig0018581:217428-217447 | Msa1368060:five_prime_UTR | 40.0% |
| GATTTCGCCATTCTTGGGTT+TGG | + | tig0018581:209333-209352 | None:intergenic | 45.0% | |
| CTTCTTCTTCTTCTTGCTGG+TGG | + | tig0018581:209385-209404 | None:intergenic | 45.0% | |
| TGCTTTCATGGCTACTGCTT+CGG | + | tig0018581:209427-209446 | None:intergenic | 45.0% | |
| !! | GTGACCAGATTGACTCGAAT+GGG | + | tig0018581:209473-209492 | None:intergenic | 45.0% |
| !! | TCGAAGTAATGGGTCAGAAG+CGG | - | tig0018581:209502-209521 | Msa1368060:three_prime_UTR | 45.0% |
| TACCATGAGCATTATGACGC+CGG | + | tig0018581:210270-210289 | None:intergenic | 45.0% | |
| AGGCCTGTTACTGTGACTTT+AGG | - | tig0018581:210337-210356 | Msa1368060:intron | 45.0% | |
| GGCCTGTTACTGTGACTTTA+GGG | - | tig0018581:210338-210357 | Msa1368060:intron | 45.0% | |
| GAGAATCGAACCTAAGACCT+TGG | - | tig0018581:210458-210477 | Msa1368060:intron | 45.0% | |
| GAATCGAACCTAAGACCTTG+GGG | - | tig0018581:210460-210479 | Msa1368060:intron | 45.0% | |
| GTAGATTAACCCACTTGGGT+TGG | + | tig0018581:210524-210543 | None:intergenic | 45.0% | |
| GGAAAAAGATGAAGACCTGC+TGG | - | tig0018581:210842-210861 | Msa1368060:intron | 45.0% | |
| AAAGATGAAGACCTGCTGGA+AGG | - | tig0018581:210846-210865 | Msa1368060:intron | 45.0% | |
| CCTTATCTAATCCTTCCAGC+AGG | + | tig0018581:210860-210879 | None:intergenic | 45.0% | |
| CCTGCTGGAAGGATTAGATA+AGG | - | tig0018581:210857-210876 | Msa1368060:intron | 45.0% | |
| TGGTTCAGTCAGAGACAACA+AGG | + | tig0018581:210910-210929 | None:intergenic | 45.0% | |
| !! | GATGAAAGCTTTGAAGGCTC+TGG | - | tig0018581:210935-210954 | Msa1368060:intron | 45.0% |
| GTTGTCTTCAGCCTATCTGA+AGG | + | tig0018581:211187-211206 | None:intergenic | 45.0% | |
| GACAACAGAAGAGATTGCTC+AGG | - | tig0018581:211201-211220 | Msa1368060:intron | 45.0% | |
| AACAGAAGAGATTGCTCAGG+AGG | - | tig0018581:211204-211223 | Msa1368060:intron | 45.0% | |
| AAGAGAACGTCTAGAGGAGT+TGG | - | tig0018581:211228-211247 | Msa1368060:intron | 45.0% | |
| GCCAACAATCTTGCAAGTGA+CGG | + | tig0018581:211515-211534 | None:intergenic | 45.0% | |
| !! | ATTGTTGGCTTGTAACCCTG+TGG | - | tig0018581:211526-211545 | Msa1368060:intron | 45.0% |
| GACTATCACCAAGATCCACA+GGG | + | tig0018581:211544-211563 | None:intergenic | 45.0% | |
| TGACTATCACCAAGATCCAC+AGG | + | tig0018581:211545-211564 | None:intergenic | 45.0% | |
| ! | GTGGATCTTGGTGATAGTCA+TGG | - | tig0018581:211545-211564 | Msa1368060:intron | 45.0% |
| ! | ATTTTACTCCCATGTGCAGC+GGG | + | tig0018581:211578-211597 | None:intergenic | 45.0% |
| TTCACTCGAATCTTCAGCAG+CGG | + | tig0018581:211681-211700 | None:intergenic | 45.0% | |
| GAGAAACCAAGATCTCTCTC+TGG | - | tig0018581:211734-211753 | Msa1368060:intron | 45.0% | |
| TCATCACCAGAGAGAGATCT+TGG | + | tig0018581:211743-211762 | None:intergenic | 45.0% | |
| TCTTGAGAGAAGAGATGAGG+AGG | - | tig0018581:211826-211845 | Msa1368060:intron | 45.0% | |
| ! | GATGAAGATGATGACGAGGA+CGG | - | tig0018581:212046-212065 | Msa1368060:CDS | 45.0% |
| ACCAAGAAGATAGTCGTTGG+AGG | - | tig0018581:212181-212200 | Msa1368060:intron | 45.0% | |
| TCCTCCAACGACTATCTTCT+TGG | + | tig0018581:212185-212204 | None:intergenic | 45.0% | |
| ! | ACACCAGAAGTGTGATCTCT+TGG | - | tig0018581:212466-212485 | Msa1368060:intron | 45.0% |
| AGTCCAAGAGATCACACTTC+TGG | + | tig0018581:212472-212491 | None:intergenic | 45.0% | |
| ! | TACAAGTCTTGTAGGGCAGT+AGG | + | tig0018581:212663-212682 | None:intergenic | 45.0% |
| TATGGTACACAGCTAACAGG+GGG | - | tig0018581:212715-212734 | Msa1368060:intron | 45.0% | |
| CTATCACAGAAAGTAGCAGC+TGG | - | tig0018581:213485-213504 | Msa1368060:intron | 45.0% | |
| ATGCGTTGCCCAATAACATC+TGG | - | tig0018581:213619-213638 | Msa1368060:intron | 45.0% | |
| ! | AGAAAGTAACTTGCCACACG+AGG | + | tig0018581:213698-213717 | None:intergenic | 45.0% |
| AAAGGACCGCGGAAGATATT+TGG | + | tig0018581:213749-213768 | None:intergenic | 45.0% | |
| ACGTCTAACTTAAAGGACCG+CGG | + | tig0018581:213760-213779 | None:intergenic | 45.0% | |
| ! | TCTTAGAAAGCACAGACCAG+AGG | + | tig0018581:214459-214478 | None:intergenic | 45.0% |
| CGCTAACATACAAGATGAGG+AGG | + | tig0018581:214810-214829 | None:intergenic | 45.0% | |
| !! | TCGAACAAACTGGTGTTGCT+TGG | - | tig0018581:214909-214928 | Msa1368060:CDS | 45.0% |
| ACGTAGGTTAAGCAGAGATC+AGG | + | tig0018581:215167-215186 | None:intergenic | 45.0% | |
| TTACTGAAAAAGGGGAGCAG+AGG | - | tig0018581:215219-215238 | Msa1368060:intron | 45.0% | |
| CAGGCTGTGCAAGGTTTAAA+TGG | - | tig0018581:215242-215261 | Msa1368060:intron | 45.0% | |
| TGGCACCAGAATGTTATGGT+TGG | - | tig0018581:215898-215917 | Msa1368060:intron | 45.0% | |
| GCCACTATTGCGCATTAATG+AGG | - | tig0018581:215987-216006 | Msa1368060:intron | 45.0% | |
| GTGAAGAATGGAGAGTCTTC+AGG | + | tig0018581:216060-216079 | None:intergenic | 45.0% | |
| ACCTCTGTTGAAACCCTACA+AGG | - | tig0018581:216376-216395 | Msa1368060:CDS | 45.0% | |
| TCCTTGTAGGGTTTCAACAG+AGG | + | tig0018581:216380-216399 | None:intergenic | 45.0% | |
| CTTAGCCAGTCAGATCAGAA+AGG | - | tig0018581:216683-216702 | Msa1368060:intron | 45.0% | |
| AGTTCCCTTTCTGATCTGAC+TGG | + | tig0018581:216691-216710 | None:intergenic | 45.0% | |
| ! | CAAGAGCTGAGAAGTATGGA+AGG | - | tig0018581:216917-216936 | Msa1368060:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAATAAC+TGG | + | tig0018581:210399-210418 | None:intergenic | 5.0% |
| !!! | GTTTGGTTTTGAGCGGCAGA+GGG | + | tig0018581:209316-209335 | None:intergenic | 50.0% |
| CTTCTTCTTCTTGCTGGTGG+TGG | + | tig0018581:209382-209401 | None:intergenic | 50.0% | |
| GCTTTCATGGCTACTGCTTC+GGG | + | tig0018581:209426-209445 | None:intergenic | 50.0% | |
| !! | CCAGATTGACTCGAATGGGT+TGG | + | tig0018581:209469-209488 | None:intergenic | 50.0% |
| CCAACCCATTCGAGTCAATC+TGG | - | tig0018581:209466-209485 | Msa1368060:three_prime_UTR | 50.0% | |
| !! | CGTGACCAGATTGACTCGAA+TGG | + | tig0018581:209474-209493 | None:intergenic | 50.0% |
| TCGAGTCAATCTGGTCACGT+AGG | - | tig0018581:209475-209494 | Msa1368060:three_prime_UTR | 50.0% | |
| !! | GTAATGGGTCAGAAGCGGAA+AGG | - | tig0018581:209507-209526 | Msa1368060:three_prime_UTR | 50.0% |
| ! | ACGTGCCAACCCCATTCTTT+TGG | + | tig0018581:209538-209557 | None:intergenic | 50.0% |
| CTCATGGTATGCAGAGTCCA+GGG | - | tig0018581:210281-210300 | Msa1368060:CDS | 50.0% | |
| TCATGGTATGCAGAGTCCAG+GGG | - | tig0018581:210282-210301 | Msa1368060:CDS | 50.0% | |
| CTGACGGTGGGGAAAATGTA+AGG | - | tig0018581:210317-210336 | Msa1368060:intron | 50.0% | |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | + | tig0018581:210504-210523 | None:intergenic | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | + | tig0018581:210505-210524 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | tig0018581:210510-210529 | None:intergenic | 50.0% |
| AGTCAGAGACAACAAGGCCT+CGG | + | tig0018581:210904-210923 | None:intergenic | 50.0% | |
| GGAGGAAAGAGAACGTCTAG+AGG | - | tig0018581:211222-211241 | Msa1368060:intron | 50.0% | |
| AGAACGTCTAGAGGAGTTGG+AGG | - | tig0018581:211231-211250 | Msa1368060:intron | 50.0% | |
| GCCGTCACTTGCAAGATTGT+TGG | - | tig0018581:211511-211530 | Msa1368060:intron | 50.0% | |
| GCTTGTAACCCTGTGGATCT+TGG | - | tig0018581:211533-211552 | Msa1368060:intron | 50.0% | |
| ! | TCTCTCTCTGGTGATGACCT+TGG | - | tig0018581:211746-211765 | Msa1368060:intron | 50.0% |
| TGAGAGAAGAGATGAGGAGG+AGG | - | tig0018581:211829-211848 | Msa1368060:intron | 50.0% | |
| GAGAGAAGAGATGAGGAGGA+GGG | - | tig0018581:211830-211849 | Msa1368060:intron | 50.0% | |
| ! | ATGTAGAAAGCACGTGCCTG+TGG | - | tig0018581:212983-213002 | Msa1368060:intron | 50.0% |
| CGCTATGTCTCTTGCGATTG+TGG | - | tig0018581:213521-213540 | Msa1368060:intron | 50.0% | |
| TCTCTTGCGATTGTGGTCCA+TGG | - | tig0018581:213528-213547 | Msa1368060:intron | 50.0% | |
| CTCTCTGTAAGTACCTCGTG+TGG | - | tig0018581:213682-213701 | Msa1368060:intron | 50.0% | |
| AGGTGAGGCGTGAAGCTAAA+GGG | - | tig0018581:216818-216837 | Msa1368060:CDS | 50.0% | |
| GACCACGGGGAGTAAAATGT+TGG | - | tig0018581:217441-217460 | Msa1368060:five_prime_UTR | 50.0% | |
| ! | TGCCAACATTTTACTCCCCG+TGG | + | tig0018581:217446-217465 | None:intergenic | 50.0% |
| !!! | GGTTTGGTTTTGAGCGGCAG+AGG | + | tig0018581:209317-209336 | None:intergenic | 55.0% |
| TCGAAACGCAGCATCGCCAA+CGG | - | tig0018581:209354-209373 | Msa1368060:intron | 55.0% | |
| GCTCATGGTATGCAGAGTCC+AGG | - | tig0018581:210280-210299 | Msa1368060:CDS | 55.0% | |
| ! | AAGCTGGTCTAGCTGACGGT+GGG | - | tig0018581:210305-210324 | Msa1368060:intron | 55.0% |
| TCGAACCTAAGACCTTGGGG+AGG | - | tig0018581:210463-210482 | Msa1368060:intron | 55.0% | |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | tig0018581:210497-210516 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | tig0018581:210498-210517 | None:intergenic | 55.0% |
| GGTCCCAAGCCAATACCACT+AGG | - | tig0018581:210498-210517 | Msa1368060:intron | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | tig0018581:210511-210530 | Msa1368060:intron | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | - | tig0018581:210512-210531 | Msa1368060:intron | 55.0% | |
| ! | CACTTCTCTGGCTCATTCCG+AGG | - | tig0018581:210884-210903 | Msa1368060:intron | 55.0% |
| TGCGTGCTCGTCCTTCAGAT+AGG | - | tig0018581:211173-211192 | Msa1368060:intron | 55.0% | |
| CGACAGAGAAGGAATCGCCA+AGG | + | tig0018581:211766-211785 | None:intergenic | 55.0% | |
| TCTGGCCGTGATATTGCCGT+TGG | - | tig0018581:213637-213656 | Msa1368060:intron | 55.0% | |
| TGAAAAAGGGGAGCAGAGGC+AGG | - | tig0018581:215223-215242 | Msa1368060:intron | 55.0% | |
| GAGGTGAGGCGTGAAGCTAA+AGG | - | tig0018581:216817-216836 | Msa1368060:CDS | 55.0% | |
| GGTGAGGCGTGAAGCTAAAG+GGG | - | tig0018581:216819-216838 | Msa1368060:intron | 55.0% | |
| ! | TTTTGAGCGGCAGAGGGTGG+TGG | + | tig0018581:209310-209329 | None:intergenic | 60.0% |
| !!! | TGGTTTTGAGCGGCAGAGGG+TGG | + | tig0018581:209313-209332 | None:intergenic | 60.0% |
| !! | CTTGCTGGTGGTGGTTCCGT+TGG | + | tig0018581:209373-209392 | None:intergenic | 60.0% |
| GGCCGGCGTCATAATGCTCA+TGG | - | tig0018581:210265-210284 | Msa1368060:CDS | 60.0% | |
| ATGCAGAGTCCAGGGGAAGC+TGG | - | tig0018581:210289-210308 | Msa1368060:CDS | 60.0% | |
| TCAGCTAGACCAGCTTCCCC+TGG | + | tig0018581:210301-210320 | None:intergenic | 60.0% | |
| ! | GGGGAAGCTGGTCTAGCTGA+CGG | - | tig0018581:210301-210320 | Msa1368060:intron | 60.0% |
| ! | GAAGCTGGTCTAGCTGACGG+TGG | - | tig0018581:210304-210323 | Msa1368060:intron | 60.0% |
| ! | AGCTGGTCTAGCTGACGGTG+GGG | - | tig0018581:210306-210325 | Msa1368060:intron | 60.0% |
| GTGCTCCTCCCCAAGGTCTT+AGG | + | tig0018581:210471-210490 | None:intergenic | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | tig0018581:210516-210535 | None:intergenic | 60.0% |
| CAGGGCAAGAAGAACCCTCG+AGG | + | tig0018581:211052-211071 | None:intergenic | 60.0% | |
| TGCAAGTGACGGCATTGCCG+AGG | + | tig0018581:211504-211523 | None:intergenic | 60.0% | |
| GAAATGGGCCCGCTGCACAT+GGG | - | tig0018581:211567-211586 | Msa1368060:intron | 60.0% | |
| CTTTCAGCTCGCACACGGTC+TGG | + | tig0018581:216781-216800 | None:intergenic | 60.0% | |
| GAGATCGCAGCGCGAACGTC+AGG | - | tig0018581:209689-209708 | Msa1368060:CDS | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCCCA+AGG | + | tig0018581:210478-210497 | None:intergenic | 65.0% |
| ! | TTGGGGAGGAGCACACTCCC+AGG | - | tig0018581:210477-210496 | Msa1368060:intron | 65.0% |
| GGAAATGGGCCCGCTGCACA+TGG | - | tig0018581:211566-211585 | Msa1368060:intron | 65.0% | |
| GAGCAGAGGCAGGCTGTGCA+AGG | - | tig0018581:215233-215252 | Msa1368060:intron | 65.0% | |
| !! | GCGGCAGAGGGTGGTGGAGA+AGG | + | tig0018581:209304-209323 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018581 | gene | 209203 | 217472 | 209203 | ID=Msa1368060;Name=Msa1368060 |
| tig0018581 | mRNA | 209203 | 217472 | 209203 | ID=Msa1368060-mRNA-1;Parent=Msa1368060;Name=Msa1368060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|1|1|1|0.64|0.73|15|293|962 |
| tig0018581 | exon | 209203 | 209223 | 209203 | ID=Msa1368060-mRNA-1:exon:288;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 209364 | 209555 | 209364 | ID=Msa1368060-mRNA-1:exon:287;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 209578 | 209922 | 209578 | ID=Msa1368060-mRNA-1:exon:286;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 210037 | 210315 | 210037 | ID=Msa1368060-mRNA-1:exon:285;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 210581 | 210720 | 210581 | ID=Msa1368060-mRNA-1:exon:284;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 211977 | 212081 | 211977 | ID=Msa1368060-mRNA-1:exon:283;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 212988 | 213181 | 212988 | ID=Msa1368060-mRNA-1:exon:282;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 213295 | 213487 | 213295 | ID=Msa1368060-mRNA-1:exon:281;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 214300 | 215019 | 214300 | ID=Msa1368060-mRNA-1:exon:280;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 215423 | 215551 | 215423 | ID=Msa1368060-mRNA-1:exon:279;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 215641 | 215853 | 215641 | ID=Msa1368060-mRNA-1:exon:278;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 215945 | 216004 | 215945 | ID=Msa1368060-mRNA-1:exon:277;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 216342 | 216424 | 216342 | ID=Msa1368060-mRNA-1:exon:276;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 216699 | 216837 | 216699 | ID=Msa1368060-mRNA-1:exon:275;Parent=Msa1368060-mRNA-1 |
| tig0018581 | exon | 216965 | 217472 | 216965 | ID=Msa1368060-mRNA-1:exon:274;Parent=Msa1368060-mRNA-1 |
| tig0018581 | five_prime_UTR | 217334 | 217472 | 217334 | ID=Msa1368060-mRNA-1:five_prime_utr;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 216965 | 217333 | 216965 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 216699 | 216837 | 216699 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 216342 | 216424 | 216342 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 215945 | 216004 | 215945 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 215641 | 215853 | 215641 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 215423 | 215551 | 215423 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 214300 | 215019 | 214300 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 213295 | 213487 | 213295 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 212988 | 213181 | 212988 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 211977 | 212081 | 211977 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 210581 | 210720 | 210581 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 210037 | 210315 | 210037 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | CDS | 209658 | 209922 | 209658 | ID=Msa1368060-mRNA-1:cds;Parent=Msa1368060-mRNA-1 |
| tig0018581 | three_prime_UTR | 209578 | 209657 | 209578 | ID=Msa1368060-mRNA-1:three_prime_utr;Parent=Msa1368060-mRNA-1 |
| tig0018581 | three_prime_UTR | 209364 | 209555 | 209364 | ID=Msa1368060-mRNA-1:three_prime_utr;Parent=Msa1368060-mRNA-1 |
| tig0018581 | three_prime_UTR | 209203 | 209223 | 209203 | ID=Msa1368060-mRNA-1:three_prime_utr;Parent=Msa1368060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
