Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344540 | XP_024628439.2 | 98.434 | 447 | 7 | 0 | 1 | 447 | 511 | 957 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344540 | sp|Q8R3N1|NOP14_MOUSE | 31.358 | 405 | 258 | 8 | 6 | 401 | 424 | 817 | 2.84e-48 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344540 | A0A396JQQ9 | 98.434 | 447 | 7 | 0 | 1 | 447 | 511 | 957 | 0.0 | 915 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0344540 | 0.810724 | 9.998626e-51 | -8.615850e-47 |
| Msa0007440 | Msa0344540 | 0.808663 | 2.772354e-50 | -8.615850e-47 |
| Msa0011960 | Msa0344540 | 0.823063 | 1.694869e-53 | -8.615850e-47 |
| Msa0026150 | Msa0344540 | 0.829378 | 5.322321e-55 | -8.615850e-47 |
| Msa0027770 | Msa0344540 | 0.803380 | 3.584440e-49 | -8.615850e-47 |
| Msa0032090 | Msa0344540 | 0.812456 | 4.201298e-51 | -8.615850e-47 |
| Msa0032580 | Msa0344540 | 0.809498 | 1.837300e-50 | -8.615850e-47 |
| Msa0033110 | Msa0344540 | 0.820021 | 8.546564e-53 | -8.615850e-47 |
| Msa0033260 | Msa0344540 | 0.811753 | 5.980408e-51 | -8.615850e-47 |
| Msa0040690 | Msa0344540 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0043660 | Msa0344540 | 0.824504 | 7.786343e-54 | -8.615850e-47 |
| Msa0047160 | Msa0344540 | 0.855532 | 5.921759e-62 | -8.615850e-47 |
| Msa0052680 | Msa0344540 | 0.804854 | 1.768788e-49 | -8.615850e-47 |
| Msa0054440 | Msa0344540 | 0.823763 | 1.162624e-53 | -8.615850e-47 |
| Msa0054480 | Msa0344540 | 0.827475 | 1.533182e-54 | -8.615850e-47 |
| Msa0056030 | Msa0344540 | 0.812211 | 4.751581e-51 | -8.615850e-47 |
| Msa0058300 | Msa0344540 | 0.801890 | 7.274429e-49 | -8.615850e-47 |
| Msa0059040 | Msa0344540 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0059110 | Msa0344540 | 0.831182 | 1.929242e-55 | -8.615850e-47 |
| Msa0061080 | Msa0344540 | 0.802221 | 6.217500e-49 | -8.615850e-47 |
| Msa0063530 | Msa0344540 | 0.827874 | 1.229417e-54 | -8.615850e-47 |
| Msa0070700 | Msa0344540 | 0.810027 | 1.413822e-50 | -8.615850e-47 |
| Msa0073700 | Msa0344540 | 0.825488 | 4.560968e-54 | -8.615850e-47 |
| Msa0075500 | Msa0344540 | 0.804615 | 1.984576e-49 | -8.615850e-47 |
| Msa0076780 | Msa0344540 | 0.805634 | 1.214344e-49 | -8.615850e-47 |
| Msa0079110 | Msa0344540 | 0.802541 | 5.342243e-49 | -8.615850e-47 |
| Msa0079380 | Msa0344540 | 0.809542 | 1.797734e-50 | -8.615850e-47 |
| Msa0084380 | Msa0344540 | 0.804612 | 1.987256e-49 | -8.615850e-47 |
| Msa0090360 | Msa0344540 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
| Msa0091410 | Msa0344540 | 0.812462 | 4.189001e-51 | -8.615850e-47 |
| Msa0094470 | Msa0344540 | 0.865980 | 3.983522e-65 | -8.615850e-47 |
| Msa0105620 | Msa0344540 | 0.816261 | 6.057431e-52 | -8.615850e-47 |
| Msa0109690 | Msa0344540 | 0.820266 | 7.512898e-53 | -8.615850e-47 |
| Msa0112770 | Msa0344540 | 0.912314 | 2.244719e-83 | -8.615850e-47 |
| Msa0118590 | Msa0344540 | 0.805048 | 1.611268e-49 | -8.615850e-47 |
| Msa0127020 | Msa0344540 | 0.844304 | 8.211288e-59 | -8.615850e-47 |
| Msa0137550 | Msa0344540 | 0.823925 | 1.065359e-53 | -8.615850e-47 |
| Msa0137840 | Msa0344540 | 0.816039 | 6.792036e-52 | -8.615850e-47 |
| Msa0144370 | Msa0344540 | 0.820201 | 7.774425e-53 | -8.615850e-47 |
| Msa0146770 | Msa0344540 | 0.812687 | 3.739493e-51 | -8.615850e-47 |
| Msa0150820 | Msa0344540 | 0.812523 | 4.061934e-51 | -8.615850e-47 |
| Msa0159170 | Msa0344540 | 0.801808 | 7.561490e-49 | -8.615850e-47 |
| Msa0160550 | Msa0344540 | 0.816578 | 5.143757e-52 | -8.615850e-47 |
| Msa0165660 | Msa0344540 | 0.803138 | 4.021281e-49 | -8.615850e-47 |
| Msa0168230 | Msa0344540 | 0.801905 | 7.219867e-49 | -8.615850e-47 |
| Msa0169280 | Msa0344540 | 0.842759 | 2.124964e-58 | -8.615850e-47 |
| Msa0171540 | Msa0344540 | 0.825667 | 4.137247e-54 | -8.615850e-47 |
| Msa0172970 | Msa0344540 | 0.800247 | 1.575995e-48 | -8.615850e-47 |
| Msa0184040 | Msa0344540 | 0.820734 | 5.865483e-53 | -8.615850e-47 |
| Msa0187120 | Msa0344540 | 0.815286 | 9.995082e-52 | -8.615850e-47 |
| Msa0189300 | Msa0344540 | 0.840138 | 1.041674e-57 | -8.615850e-47 |
| Msa0205230 | Msa0344540 | 0.819639 | 1.044757e-52 | -8.615850e-47 |
| Msa0208220 | Msa0344540 | 0.808992 | 2.357883e-50 | -8.615850e-47 |
| Msa0214710 | Msa0344540 | 0.804016 | 2.644453e-49 | -8.615850e-47 |
| Msa0219690 | Msa0344540 | 0.800796 | 1.218372e-48 | -8.615850e-47 |
| Msa0220720 | Msa0344540 | 0.817038 | 4.057618e-52 | -8.615850e-47 |
| Msa0222620 | Msa0344540 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0226470 | Msa0344540 | 0.838851 | 2.248719e-57 | -8.615850e-47 |
| Msa0227400 | Msa0344540 | 0.829843 | 4.102719e-55 | -8.615850e-47 |
| Msa0228070 | Msa0344540 | 0.826682 | 2.373219e-54 | -8.615850e-47 |
| Msa0229170 | Msa0344540 | 0.813143 | 2.970937e-51 | -8.615850e-47 |
| Msa0231660 | Msa0344540 | 0.828350 | 9.438030e-55 | -8.615850e-47 |
| Msa0241470 | Msa0344540 | 0.811623 | 6.380404e-51 | -8.615850e-47 |
| Msa0255080 | Msa0344540 | 0.811287 | 7.551455e-51 | -8.615850e-47 |
| Msa0271530 | Msa0344540 | 0.819825 | 9.476396e-53 | -8.615850e-47 |
| Msa0278790 | Msa0344540 | 0.803165 | 3.971053e-49 | -8.615850e-47 |
| Msa0279220 | Msa0344540 | 0.835103 | 2.038445e-56 | -8.615850e-47 |
| Msa0279240 | Msa0344540 | 0.837203 | 5.968427e-57 | -8.615850e-47 |
| Msa0299870 | Msa0344540 | 0.814904 | 1.214747e-51 | -8.615850e-47 |
| Msa0309750 | Msa0344540 | 0.874248 | 7.834335e-68 | -8.615850e-47 |
| Msa0309770 | Msa0344540 | 0.846796 | 1.734248e-59 | -8.615850e-47 |
| Msa0318980 | Msa0344540 | 0.825473 | 4.599121e-54 | -8.615850e-47 |
| Msa0326480 | Msa0344540 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
| Msa0333030 | Msa0344540 | 0.806783 | 6.954892e-50 | -8.615850e-47 |
| Msa0337240 | Msa0344540 | 0.807380 | 5.199018e-50 | -8.615850e-47 |
| Msa0341030 | Msa0344540 | 0.807129 | 5.877722e-50 | -8.615850e-47 |
| Msa0344540 | Msa0345350 | 0.815989 | 6.966557e-52 | -8.615850e-47 |
| Msa0344540 | Msa0345390 | 0.803455 | 3.457487e-49 | -8.615850e-47 |
| Msa0344540 | Msa0357900 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0344540 | Msa0366890 | 0.833902 | 4.084806e-56 | -8.615850e-47 |
| Msa0344540 | Msa0376300 | 0.815515 | 8.888059e-52 | -8.615850e-47 |
| Msa0344540 | Msa0376310 | 0.810846 | 9.408433e-51 | -8.615850e-47 |
| Msa0344540 | Msa0385580 | 0.845356 | 4.274591e-59 | -8.615850e-47 |
| Msa0344540 | Msa0388700 | 0.845786 | 3.268620e-59 | -8.615850e-47 |
| Msa0344540 | Msa0388950 | 0.819782 | 9.694951e-53 | -8.615850e-47 |
| Msa0344540 | Msa0397540 | 0.847642 | 1.016063e-59 | -8.615850e-47 |
| Msa0344540 | Msa0414800 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0344540 | Msa0422840 | 0.838355 | 3.020981e-57 | -8.615850e-47 |
| Msa0344540 | Msa0422920 | 0.837472 | 5.094263e-57 | -8.615850e-47 |
| Msa0344540 | Msa0458060 | 0.830629 | 2.636372e-55 | -8.615850e-47 |
| Msa0344540 | Msa0465550 | 0.802369 | 5.798030e-49 | -8.615850e-47 |
| Msa0344540 | Msa0466250 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0344540 | Msa0481280 | 0.808021 | 3.800307e-50 | -8.615850e-47 |
| Msa0344540 | Msa0481530 | 0.843392 | 1.441765e-58 | -8.615850e-47 |
| Msa0344540 | Msa0482130 | 0.825495 | 4.543974e-54 | -8.615850e-47 |
| Msa0344540 | Msa0493410 | 0.815413 | 9.361693e-52 | -8.615850e-47 |
| Msa0344540 | Msa0510930 | 0.817007 | 4.121287e-52 | -8.615850e-47 |
| Msa0344540 | Msa0511490 | 0.813448 | 2.546569e-51 | -8.615850e-47 |
| Msa0344540 | Msa0523050 | 0.809769 | 1.606300e-50 | -8.615850e-47 |
| Msa0344540 | Msa0529890 | 0.826488 | 2.638779e-54 | -8.615850e-47 |
| Msa0344540 | Msa0539410 | 0.807399 | 5.150838e-50 | -8.615850e-47 |
| Msa0344540 | Msa0542090 | 0.865394 | 6.095395e-65 | -8.615850e-47 |
| Msa0344540 | Msa0542130 | 0.863912 | 1.773911e-64 | -8.615850e-47 |
| Msa0344540 | Msa0554290 | 0.815010 | 1.150730e-51 | -8.615850e-47 |
| Msa0344540 | Msa0555450 | 0.829760 | 4.297132e-55 | -8.615850e-47 |
| Msa0344540 | Msa0556060 | 0.815162 | 1.064677e-51 | -8.615850e-47 |
| Msa0344540 | Msa0557070 | 0.826196 | 3.097322e-54 | -8.615850e-47 |
| Msa0344540 | Msa0558230 | 0.810615 | 1.055273e-50 | -8.615850e-47 |
| Msa0344540 | Msa0569220 | 0.800514 | 1.390487e-48 | -8.615850e-47 |
| Msa0344540 | Msa0581280 | 0.838091 | 3.533347e-57 | -8.615850e-47 |
| Msa0344540 | Msa0585560 | 0.836938 | 6.977233e-57 | -8.615850e-47 |
| Msa0344540 | Msa0592440 | 0.817568 | 3.082920e-52 | -8.615850e-47 |
| Msa0344540 | Msa0600600 | 0.806069 | 9.836969e-50 | -8.615850e-47 |
| Msa0344540 | Msa0605000 | 0.829786 | 4.236875e-55 | -8.615850e-47 |
| Msa0344540 | Msa0608500 | 0.814987 | 1.164302e-51 | -8.615850e-47 |
| Msa0344540 | Msa0609410 | -0.829325 | 5.484290e-55 | -8.615850e-47 |
| Msa0344540 | Msa0610430 | 0.819668 | 1.029002e-52 | -8.615850e-47 |
| Msa0344540 | Msa0615440 | 0.818508 | 1.889352e-52 | -8.615850e-47 |
| Msa0344540 | Msa0615490 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0344540 | Msa0617640 | 0.836847 | 7.363215e-57 | -8.615850e-47 |
| Msa0344540 | Msa0625720 | 0.827619 | 1.415253e-54 | -8.615850e-47 |
| Msa0344540 | Msa0631350 | 0.801024 | 1.094110e-48 | -8.615850e-47 |
| Msa0344540 | Msa0663390 | 0.836263 | 1.036725e-56 | -8.615850e-47 |
| Msa0344540 | Msa0663810 | 0.803670 | 3.120704e-49 | -8.615850e-47 |
| Msa0344540 | Msa0685140 | 0.853195 | 2.804665e-61 | -8.615850e-47 |
| Msa0344540 | Msa0689260 | 0.817204 | 3.723223e-52 | -8.615850e-47 |
| Msa0344540 | Msa0691290 | 0.850289 | 1.869850e-60 | -8.615850e-47 |
| Msa0344540 | Msa0691900 | 0.809031 | 2.313093e-50 | -8.615850e-47 |
| Msa0344540 | Msa0692830 | 0.810127 | 1.345493e-50 | -8.615850e-47 |
| Msa0344540 | Msa0692950 | 0.806870 | 6.666432e-50 | -8.615850e-47 |
| Msa0344540 | Msa0698060 | 0.804933 | 1.702433e-49 | -8.615850e-47 |
| Msa0344540 | Msa0698490 | 0.821366 | 4.194628e-53 | -8.615850e-47 |
| Msa0344540 | Msa0698540 | 0.826035 | 3.383152e-54 | -8.615850e-47 |
| Msa0344540 | Msa0698660 | 0.819564 | 1.087083e-52 | -8.615850e-47 |
| Msa0344540 | Msa0698800 | 0.811093 | 8.315893e-51 | -8.615850e-47 |
| Msa0344540 | Msa0707250 | 0.800362 | 1.493169e-48 | -8.615850e-47 |
| Msa0344540 | Msa0709500 | 0.807767 | 4.303162e-50 | -8.615850e-47 |
| Msa0344540 | Msa0711100 | 0.804037 | 2.618403e-49 | -8.615850e-47 |
| Msa0344540 | Msa0711780 | 0.827663 | 1.381175e-54 | -8.615850e-47 |
| Msa0344540 | Msa0711890 | 0.803112 | 4.071167e-49 | -8.615850e-47 |
| Msa0344540 | Msa0715650 | 0.808914 | 2.450138e-50 | -8.615850e-47 |
| Msa0344540 | Msa0715700 | 0.808369 | 3.204442e-50 | -8.615850e-47 |
| Msa0344540 | Msa0716840 | 0.801722 | 7.874197e-49 | -8.615850e-47 |
| Msa0344540 | Msa0719420 | 0.806885 | 6.618970e-50 | -8.615850e-47 |
| Msa0344540 | Msa0721280 | 0.827849 | 1.246210e-54 | -8.615850e-47 |
| Msa0344540 | Msa0745790 | 0.805380 | 1.372968e-49 | -8.615850e-47 |
| Msa0344540 | Msa0762970 | 0.817929 | 2.555163e-52 | -8.615850e-47 |
| Msa0344540 | Msa0772480 | 0.836313 | 1.007119e-56 | -8.615850e-47 |
| Msa0344540 | Msa0789680 | 0.809122 | 2.211825e-50 | -8.615850e-47 |
| Msa0344540 | Msa0790660 | -0.803599 | 3.228040e-49 | -8.615850e-47 |
| Msa0344540 | Msa0790850 | 0.805835 | 1.101718e-49 | -8.615850e-47 |
| Msa0344540 | Msa0793800 | 0.806842 | 6.758940e-50 | -8.615850e-47 |
| Msa0344540 | Msa0794670 | 0.842577 | 2.375378e-58 | -8.615850e-47 |
| Msa0344540 | Msa0796530 | 0.813273 | 2.782347e-51 | -8.615850e-47 |
| Msa0344540 | Msa0798440 | 0.838558 | 2.677834e-57 | -8.615850e-47 |
| Msa0344540 | Msa0802410 | 0.823889 | 1.086363e-53 | -8.615850e-47 |
| Msa0344540 | Msa0808270 | 0.838568 | 2.661972e-57 | -8.615850e-47 |
| Msa0344540 | Msa0816700 | 0.804902 | 1.728681e-49 | -8.615850e-47 |
| Msa0344540 | Msa0830540 | 0.827543 | 1.476644e-54 | -8.615850e-47 |
| Msa0344540 | Msa0831530 | 0.814944 | 1.190503e-51 | -8.615850e-47 |
| Msa0344540 | Msa0832150 | 0.801506 | 8.720371e-49 | -8.615850e-47 |
| Msa0344540 | Msa0859180 | 0.812301 | 4.540757e-51 | -8.615850e-47 |
| Msa0344540 | Msa0876810 | 0.833067 | 6.596252e-56 | -8.615850e-47 |
| Msa0344540 | Msa0878510 | 0.801448 | 8.962115e-49 | -8.615850e-47 |
| Msa0344540 | Msa0887250 | 0.829339 | 5.440391e-55 | -8.615850e-47 |
| Msa0344540 | Msa0897080 | 0.807379 | 5.203226e-50 | -8.615850e-47 |
| Msa0344540 | Msa0900110 | 0.840724 | 7.316257e-58 | -8.615850e-47 |
| Msa0344540 | Msa0902760 | 0.809022 | 2.323857e-50 | -8.615850e-47 |
| Msa0344540 | Msa0918390 | 0.803859 | 2.850429e-49 | -8.615850e-47 |
| Msa0344540 | Msa0926850 | 0.841380 | 4.921784e-58 | -8.615850e-47 |
| Msa0344540 | Msa0945440 | 0.853484 | 2.318638e-61 | -8.615850e-47 |
| Msa0344540 | Msa0962840 | 0.807369 | 5.227303e-50 | -8.615850e-47 |
| Msa0344540 | Msa0968590 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
| Msa0344540 | Msa0969340 | 0.806534 | 7.852617e-50 | -8.615850e-47 |
| Msa0344540 | Msa0970030 | 0.822282 | 2.575253e-53 | -8.615850e-47 |
| Msa0344540 | Msa0987370 | 0.829181 | 5.942379e-55 | -8.615850e-47 |
| Msa0344540 | Msa0989540 | 0.813082 | 3.065012e-51 | -8.615850e-47 |
| Msa0344540 | Msa0999970 | 0.819299 | 1.249153e-52 | -8.615850e-47 |
| Msa0344540 | Msa1006840 | 0.837247 | 5.818498e-57 | -8.615850e-47 |
| Msa0344540 | Msa1009750 | 0.817809 | 2.720027e-52 | -8.615850e-47 |
| Msa0344540 | Msa1009820 | 0.816472 | 5.433809e-52 | -8.615850e-47 |
| Msa0344540 | Msa1013400 | 0.807037 | 6.147527e-50 | -8.615850e-47 |
| Msa0344540 | Msa1014420 | 0.828977 | 6.657981e-55 | -8.615850e-47 |
| Msa0344540 | Msa1041210 | 0.819090 | 1.393683e-52 | -8.615850e-47 |
| Msa0344540 | Msa1051200 | 0.833328 | 5.679838e-56 | -8.615850e-47 |
| Msa0344540 | Msa1055410 | 0.833852 | 4.203052e-56 | -8.615850e-47 |
| Msa0344540 | Msa1077030 | 0.835163 | 1.969501e-56 | -8.615850e-47 |
| Msa0344540 | Msa1084470 | 0.800236 | 1.584432e-48 | -8.615850e-47 |
| Msa0344540 | Msa1087710 | 0.800657 | 1.300629e-48 | -8.615850e-47 |
| Msa0344540 | Msa1091940 | 0.850059 | 2.169060e-60 | -8.615850e-47 |
| Msa0344540 | Msa1093530 | 0.809399 | 1.928524e-50 | -8.615850e-47 |
| Msa0344540 | Msa1097820 | 0.808629 | 2.820001e-50 | -8.615850e-47 |
| Msa0344540 | Msa1104140 | 0.822686 | 2.074185e-53 | -8.615850e-47 |
| Msa0344540 | Msa1109680 | 0.806964 | 6.369627e-50 | -8.615850e-47 |
| Msa0344540 | Msa1119200 | 0.812015 | 5.244243e-51 | -8.615850e-47 |
| Msa0344540 | Msa1121440 | 0.824726 | 6.905169e-54 | -8.615850e-47 |
| Msa0344540 | Msa1126450 | 0.814935 | 1.195597e-51 | -8.615850e-47 |
| Msa0344540 | Msa1133400 | 0.805076 | 1.589203e-49 | -8.615850e-47 |
| Msa0344540 | Msa1137700 | 0.830212 | 3.335525e-55 | -8.615850e-47 |
| Msa0344540 | Msa1144040 | 0.811114 | 8.230231e-51 | -8.615850e-47 |
| Msa0344540 | Msa1147970 | 0.815475 | 9.071399e-52 | -8.615850e-47 |
| Msa0344540 | Msa1160590 | 0.851084 | 1.117149e-60 | -8.615850e-47 |
| Msa0344540 | Msa1171360 | 0.805184 | 1.508830e-49 | -8.615850e-47 |
| Msa0344540 | Msa1176710 | 0.800058 | 1.721960e-48 | -8.615850e-47 |
| Msa0344540 | Msa1179950 | 0.810039 | 1.405289e-50 | -8.615850e-47 |
| Msa0344540 | Msa1179980 | 0.801652 | 8.138244e-49 | -8.615850e-47 |
| Msa0344540 | Msa1181250 | 0.832705 | 8.115904e-56 | -8.615850e-47 |
| Msa0344540 | Msa1181330 | 0.824633 | 7.263320e-54 | -8.615850e-47 |
| Msa0344540 | Msa1207270 | 0.807030 | 6.168311e-50 | -8.615850e-47 |
| Msa0344540 | Msa1208880 | 0.837256 | 5.787952e-57 | -8.615850e-47 |
| Msa0344540 | Msa1209200 | 0.843086 | 1.738852e-58 | -8.615850e-47 |
| Msa0344540 | Msa1209260 | 0.809814 | 1.570821e-50 | -8.615850e-47 |
| Msa0344540 | Msa1209760 | 0.851873 | 6.684177e-61 | -8.615850e-47 |
| Msa0344540 | Msa1216260 | 0.808756 | 2.648929e-50 | -8.615850e-47 |
| Msa0344540 | Msa1217470 | 0.849832 | 2.509532e-60 | -8.615850e-47 |
| Msa0344540 | Msa1217580 | 0.826269 | 2.975523e-54 | -8.615850e-47 |
| Msa0344540 | Msa1218600 | 0.805109 | 1.564328e-49 | -8.615850e-47 |
| Msa0344540 | Msa1224810 | 0.812272 | 4.609406e-51 | -8.615850e-47 |
| Msa0344540 | Msa1237940 | 0.810547 | 1.091767e-50 | -8.615850e-47 |
| Msa0344540 | Msa1245930 | 0.836014 | 1.199488e-56 | -8.615850e-47 |
| Msa0344540 | Msa1254730 | 0.800324 | 1.520302e-48 | -8.615850e-47 |
| Msa0344540 | Msa1259060 | 0.836545 | 8.787931e-57 | -8.615850e-47 |
| Msa0344540 | Msa1265630 | 0.856676 | 2.738083e-62 | -8.615850e-47 |
| Msa0344540 | Msa1294070 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa0344540 | Msa1294820 | 0.817800 | 2.731994e-52 | -8.615850e-47 |
| Msa0344540 | Msa1302380 | 0.832937 | 7.107920e-56 | -8.615850e-47 |
| Msa0344540 | Msa1302850 | 0.802565 | 5.282824e-49 | -8.615850e-47 |
| Msa0344540 | Msa1306920 | 0.818097 | 2.341695e-52 | -8.615850e-47 |
| Msa0344540 | Msa1313140 | 0.820100 | 8.197486e-53 | -8.615850e-47 |
| Msa0344540 | Msa1330290 | 0.803332 | 3.667032e-49 | -8.615850e-47 |
| Msa0344540 | Msa1332590 | 0.851398 | 9.107527e-61 | -8.615850e-47 |
| Msa0344540 | Msa1335250 | 0.809376 | 1.950880e-50 | -8.615850e-47 |
| Msa0344540 | Msa1355700 | 0.815289 | 9.975434e-52 | -8.615850e-47 |
| Msa0344540 | Msa1356440 | 0.822908 | 1.841967e-53 | -8.615850e-47 |
| Msa0344540 | Msa1357890 | 0.829414 | 5.218018e-55 | -8.615850e-47 |
| Msa0344540 | Msa1358250 | 0.821817 | 3.299773e-53 | -8.615850e-47 |
| Msa0344540 | Msa1366600 | 0.809997 | 1.434553e-50 | -8.615850e-47 |
| Msa0344540 | Msa1368060 | 0.966255 | 1.118815e-125 | -8.615850e-47 |
| Msa0344540 | Msa1374120 | 0.804241 | 2.373850e-49 | -8.615850e-47 |
| Msa0344540 | Msa1383740 | 0.805361 | 1.385418e-49 | -8.615850e-47 |
| Msa0344540 | Msa1388860 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0344540 | Msa1389800 | 0.801784 | 7.645903e-49 | -8.615850e-47 |
| Msa0344540 | Msa1392780 | 0.837683 | 4.498834e-57 | -8.615850e-47 |
| Msa0344540 | Msa1394290 | 0.868828 | 4.885496e-66 | -8.615850e-47 |
| Msa0344540 | Msa1398090 | 0.829948 | 3.869146e-55 | -8.615850e-47 |
| Msa0344540 | Msa1400580 | 0.837189 | 6.020079e-57 | -8.615850e-47 |
| Msa0344540 | Msa1403340 | 0.804123 | 2.512428e-49 | -8.615850e-47 |
| Msa0344540 | Msa1412130 | 0.819443 | 1.158495e-52 | -8.615850e-47 |
| Msa0344540 | Msa1419870 | 0.840007 | 1.126613e-57 | -8.615850e-47 |
| Msa0344540 | Msa1423350 | 0.811150 | 8.086150e-51 | -8.615850e-47 |
| Msa0344540 | Msa1423870 | 0.818500 | 1.897318e-52 | -8.615850e-47 |
| Msa0344540 | Msa1425260 | 0.818907 | 1.534439e-52 | -8.615850e-47 |
| Msa0344540 | Msa1433390 | 0.812088 | 5.055443e-51 | -8.615850e-47 |
| Msa0344540 | Msa1439550 | 0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0344540 | Msa1443850 | 0.816944 | 4.258268e-52 | -8.615850e-47 |
| Msa0344540 | Msa1444310 | 0.828825 | 7.249294e-55 | -8.615850e-47 |
| Msa0344540 | Msa1457920 | 0.846920 | 1.603675e-59 | -8.615850e-47 |
| Msa0344540 | Msa1466540 | 0.802457 | 5.560133e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344540 | MtrunA17_Chr1g0167361 | 98.434 | 447 | 7 | 0 | 1 | 447 | 511 | 957 | 0.0 | 915 |
| Msa0344540 | MtrunA17_Chr1g0181141 | 98.210 | 447 | 8 | 0 | 1 | 447 | 518 | 964 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344540 | AT1G69070.2 | 62.329 | 438 | 165 | 0 | 2 | 439 | 457 | 894 | 0.0 | 566 |
| Msa0344540 | AT1G69070.1 | 61.872 | 438 | 164 | 1 | 2 | 439 | 457 | 891 | 0.0 | 558 |
Find 201 sgRNAs with CRISPR-Local
Find 518 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGATGATTTCGCCATTCT+TGG | 0.167175 | 3_1:+3304264 | None:intergenic |
| AAACTAGAGAAGAAAGAATT+AGG | 0.172943 | 3_1:+3304350 | None:intergenic |
| TTCGTTCATCACTTCCTTCT+TGG | 0.196187 | 3_1:+3302916 | None:intergenic |
| TCTTCACTACTGACAGTTTC+AGG | 0.214470 | 3_1:-3297529 | Msa0344540:intron |
| CTGCCAGTTATATCATCTTA+TGG | 0.216501 | 3_1:-3297654 | Msa0344540:intron |
| AAAATTGGTGAAAATATTTC+TGG | 0.216827 | 3_1:+3297169 | None:intergenic |
| TGAAGAAACTATGACTAAAA+AGG | 0.225009 | 3_1:-3301812 | Msa0344540:five_prime_UTR |
| TGCTTTCATGGCTACTGCTT+CGG | 0.243552 | 3_1:+3304176 | None:intergenic |
| TCCTCCAACGACTATCTTCT+TGG | 0.257256 | 3_1:+3301418 | None:intergenic |
| GATGAAGGCCTTGATGATTT+TGG | 0.264737 | 3_1:-3303942 | Msa0344540:five_prime_UTR |
| TTCAAAGCTTTCATCTTGTT+TGG | 0.273827 | 3_1:+3302670 | None:intergenic |
| GCAGAAGTTGATAAGGTAAA+AGG | 0.285083 | 3_1:-3301520 | Msa0344540:five_prime_UTR |
| GCTTTCATGGCTACTGCTTC+GGG | 0.299044 | 3_1:+3304177 | None:intergenic |
| TCAAGTAGTAATCTCAAAAT+TGG | 0.299845 | 3_1:+3297154 | None:intergenic |
| TTCGGAGCTTCAATTATATA+AGG | 0.299927 | 3_1:+3301371 | None:intergenic |
| AGAATACTACTTTGAAAGAT+TGG | 0.304400 | 3_1:-3301648 | Msa0344540:five_prime_UTR |
| ATATCACGGCCAGATGTTAT+TGG | 0.309858 | 3_1:+3299973 | None:intergenic |
| CAACCCCAACCCCATTCTTT+TGG | 0.312471 | 3_1:+3304065 | None:intergenic |
| ATCAATAAACTCGGACGATT+TGG | 0.313352 | 3_1:+3303983 | None:intergenic |
| GCACATATTGCAGCAAAGTA+TGG | 0.315156 | 3_1:+3300299 | None:intergenic |
| CTTTCAGCTCGCACACGGTC+TGG | 0.326776 | 3_1:+3296824 | None:intergenic |
| TTTGCAGATATTTCAGATTT+GGG | 0.328110 | 3_1:-3303352 | Msa0344540:intron |
| AAAGTTTGAATAAATACTAT+TGG | 0.330563 | 3_1:+3298975 | None:intergenic |
| TGAATAAATACTATTGGTTC+AGG | 0.334462 | 3_1:+3298981 | None:intergenic |
| TTCTTGATGCAGCTATGTTA+AGG | 0.339589 | 3_1:-3296861 | Msa0344540:intron |
| CAAGAACATGCTTTCAAATC+TGG | 0.340841 | 3_1:-3296641 | Msa0344540:CDS |
| TTCAGTAATTTGATTGGAAC+TGG | 0.357854 | 3_1:+3297004 | None:intergenic |
| AAGCATGTTCTTGCTCTTGA+AGG | 0.361044 | 3_1:+3296651 | None:intergenic |
| AACTAGAGAAGAAAGAATTA+GGG | 0.363719 | 3_1:+3304351 | None:intergenic |
| AAACATCCTTGGTGTTTAGA+AGG | 0.369544 | 3_1:+3296327 | None:intergenic |
| TGACCAACTTGTCAGACAAT+TGG | 0.376534 | 3_1:-3302456 | Msa0344540:five_prime_UTR |
| CTTCTTCTTCTTGCTGGTGG+TGG | 0.378523 | 3_1:+3304221 | None:intergenic |
| GATGATGATGATATCAGTTC+AGG | 0.380797 | 3_1:-3301616 | Msa0344540:five_prime_UTR |
| TTAGGATTCAGTAATTTGAT+TGG | 0.384079 | 3_1:+3296998 | None:intergenic |
| AAAATATGCCAAATGCATTA+CGG | 0.387295 | 3_1:-3297117 | Msa0344540:CDS |
| GATTTCGCCATTCTTGGGTT+TGG | 0.391028 | 3_1:+3304270 | None:intergenic |
| GACAATGAATAATTCTGTTC+AGG | 0.394333 | 3_1:-3302584 | Msa0344540:intron |
| AGGTAAAAGGATTGAATGTT+GGG | 0.395632 | 3_1:-3301507 | Msa0344540:five_prime_UTR |
| AGTATCACAGGAGTCATAAC+TGG | 0.397195 | 3_1:+3300024 | None:intergenic |
| AAGGTAAAAGGATTGAATGT+TGG | 0.397569 | 3_1:-3301508 | Msa0344540:five_prime_UTR |
| AAAGCAAGAGCTGAGAAGTA+TGG | 0.398033 | 3_1:-3296689 | Msa0344540:CDS |
| AAACAAGATGAAAGCTTTGA+AGG | 0.398300 | 3_1:-3302668 | Msa0344540:five_prime_UTR |
| GGAAGTGTAAAGGGAGATAA+TGG | 0.398968 | 3_1:-3301452 | Msa0344540:five_prime_UTR |
| ATTACTGAATCCTAAGTTTG+AGG | 0.398976 | 3_1:-3296990 | Msa0344540:CDS |
| GTGAAGAATGGAGAGTCTTC+AGG | 0.403043 | 3_1:+3297545 | None:intergenic |
| GATTCTGTTGGAAGTGTAAA+GGG | 0.404106 | 3_1:-3301461 | Msa0344540:five_prime_UTR |
| TCTTGATGCAGCTATGTTAA+GGG | 0.404207 | 3_1:-3296860 | Msa0344540:intron |
| CTTTGAAGATGAGATGCTTC+GGG | 0.407003 | 3_1:-3303663 | Msa0344540:five_prime_UTR |
| GATCCCCACATATTATTTGA+AGG | 0.409851 | 3_1:-3296463 | Msa0344540:three_prime_UTR |
| TCGATGATTTCGCCATTCTT+GGG | 0.414032 | 3_1:+3304265 | None:intergenic |
| GATGAATTTGAAGGAATTGA+TGG | 0.414203 | 3_1:-3303701 | Msa0344540:five_prime_UTR |
| AAATATGCCAAATGCATTAC+GGG | 0.415102 | 3_1:-3297116 | Msa0344540:CDS |
| TTTGAAGGAATTGATGGTCT+TGG | 0.415825 | 3_1:-3303695 | Msa0344540:five_prime_UTR |
| TCCGTACTCATCTCTATCAA+TGG | 0.415890 | 3_1:+3300326 | None:intergenic |
| GAGTTTATTGATAGAAGAAT+TGG | 0.416122 | 3_1:-3303972 | Msa0344540:five_prime_UTR |
| AGGTGAGGCGTGAAGCTAAA+GGG | 0.417578 | 3_1:-3296784 | Msa0344540:CDS |
| CGCTATGTCTCTTGCGATTG+TGG | 0.418991 | 3_1:-3300080 | Msa0344540:CDS |
| CGTAGGAAGTTCGAAGTAAT+GGG | 0.419506 | 3_1:-3304108 | Msa0344540:five_prime_UTR |
| GAATACTACTTTGAAAGATT+GGG | 0.420352 | 3_1:-3301647 | Msa0344540:five_prime_UTR |
| TATCACGGCCAGATGTTATT+GGG | 0.421115 | 3_1:+3299974 | None:intergenic |
| TCATCACCAGAGAGAGATCT+TGG | 0.422739 | 3_1:+3301859 | None:intergenic |
| ACAAGTTGGTCATATTCATC+TGG | 0.423674 | 3_1:+3302467 | None:intergenic |
| GAATAAATGTTAAAACTTGT+GGG | 0.424369 | 3_1:-3296576 | Msa0344540:three_prime_UTR |
| TCCTCATTAATGCGCAATAG+TGG | 0.429661 | 3_1:+3297614 | None:intergenic |
| CATAATTCTTCAAAGGTCTT+CGG | 0.431108 | 3_1:+3301353 | None:intergenic |
| TGAGAGAAGAGATGAGGAGG+AGG | 0.431745 | 3_1:-3301770 | Msa0344540:five_prime_UTR |
| AGGCATTGATATATCCTTGT+AGG | 0.432380 | 3_1:+3297212 | None:intergenic |
| CATAACTGGATGTCTAAAAT+CGG | 0.433346 | 3_1:+3300038 | None:intergenic |
| GACCAACTTGTCAGACAATT+GGG | 0.434843 | 3_1:-3302455 | Msa0344540:five_prime_UTR |
| AAGAGCTGCAGAAGTTGATA+AGG | 0.435279 | 3_1:-3301527 | Msa0344540:five_prime_UTR |
| GACGATGATGATGAATTTGA+AGG | 0.438628 | 3_1:-3303710 | Msa0344540:five_prime_UTR |
| AAATCTGGACAACTAGGAAA+AGG | 0.438682 | 3_1:-3296626 | Msa0344540:CDS |
| ACTTTGAAGATGAGATGCTT+CGG | 0.439081 | 3_1:-3303664 | Msa0344540:five_prime_UTR |
| TCTCTCCTTCAAATAATATG+TGG | 0.439934 | 3_1:+3296458 | None:intergenic |
| AGATAAGGACTTCACTTCTC+TGG | 0.442591 | 3_1:-3302725 | Msa0344540:five_prime_UTR |
| TATATCATGCGAAAATTCTC+AGG | 0.447408 | 3_1:-3298925 | Msa0344540:intron |
| GCAACCCATTCGAGTCAATC+TGG | 0.448516 | 3_1:-3304134 | Msa0344540:five_prime_UTR |
| GATGAAAGCTTTGAAGGCTC+TGG | 0.454907 | 3_1:-3302662 | Msa0344540:five_prime_UTR |
| AAGAGAACGTCTAGAGGAGT+TGG | 0.457721 | 3_1:-3302369 | Msa0344540:five_prime_UTR |
| GAGATCGCAGCGCGAACGTC+AGG | 0.458888 | 3_1:-3303907 | Msa0344540:intron |
| CTTGCTGGTGGTGGTTCCGT+TGG | 0.462169 | 3_1:+3304230 | None:intergenic |
| CTCTCCTTCAAATAATATGT+GGG | 0.465901 | 3_1:+3296459 | None:intergenic |
| TGATATATGTTTACTTTCAG+TGG | 0.466596 | 3_1:+3298941 | None:intergenic |
| TCTTAATCATCAATCGGATT+CGG | 0.468845 | 3_1:-3301295 | Msa0344540:CDS |
| GATACCAAAAGAATGGGGTT+GGG | 0.471493 | 3_1:-3304069 | Msa0344540:five_prime_UTR |
| TGAATAAATGTTAAAACTTG+TGG | 0.472318 | 3_1:-3296577 | Msa0344540:three_prime_UTR |
| ACGTAGGAAGTTCGAAGTAA+TGG | 0.476055 | 3_1:-3304109 | Msa0344540:five_prime_UTR |
| GAACGAACTCAAGTTATCAT+AGG | 0.478056 | 3_1:+3297192 | None:intergenic |
| CAAAAGAATGGGGTTGGGGT+TGG | 0.478739 | 3_1:-3304064 | Msa0344540:five_prime_UTR |
| AAAGGAGATACCAAAAGAAT+GGG | 0.479733 | 3_1:-3304075 | Msa0344540:five_prime_UTR |
| AAGATAGCTTGTCTGCTAAA+CGG | 0.481368 | 3_1:-3302606 | Msa0344540:five_prime_UTR |
| GAAAGGAGATACCAAAAGAA+TGG | 0.481481 | 3_1:-3304076 | Msa0344540:five_prime_UTR |
| AGCAAAAGAAATGATTCTGT+TGG | 0.481796 | 3_1:-3301473 | Msa0344540:five_prime_UTR |
| CTTTGAAGAATTATGTTCAC+TGG | 0.483060 | 3_1:-3301345 | Msa0344540:CDS |
| CTACTTCTTGCTTGATGTGA+AGG | 0.483308 | 3_1:-3296735 | Msa0344540:CDS |
| CTCAAAACCAAACCCAAGAA+TGG | 0.485754 | 3_1:-3304277 | Msa0344540:five_prime_UTR |
| TCATATTCTCAAGAACGAAC+TGG | 0.487217 | 3_1:+3296402 | None:intergenic |
| ACACTATCTTAATCATCAAT+CGG | 0.489425 | 3_1:-3301301 | Msa0344540:CDS |
| ATCCCAATTGTCTGACAAGT+TGG | 0.491655 | 3_1:+3302453 | None:intergenic |
| AAATTGGTGAAAATATTTCT+GGG | 0.493600 | 3_1:+3297170 | None:intergenic |
| GGCATTGATATATCCTTGTA+GGG | 0.493842 | 3_1:+3297213 | None:intergenic |
| GAAGAAGAAGAACAACAAGA+TGG | 0.497085 | 3_1:-3304202 | Msa0344540:five_prime_UTR |
| ATGCAGAGTCCAGGGGAAGC+TGG | 0.497735 | 3_1:-3303307 | Msa0344540:five_prime_UTR |
| ATACCAAAAGAATGGGGTTG+GGG | 0.498035 | 3_1:-3304068 | Msa0344540:five_prime_UTR |
| TTTCAACTTTAGTTAGTCAC+TGG | 0.500864 | 3_1:-3296376 | Msa0344540:three_prime_UTR |
| TCTTGAGAGAAGAGATGAGG+AGG | 0.501654 | 3_1:-3301773 | Msa0344540:five_prime_UTR |
| ATGCGTTGCCCAATAACATC+TGG | 0.502843 | 3_1:-3299982 | Msa0344540:CDS |
| GCCACTATTGCGCATTAATG+AGG | 0.509019 | 3_1:-3297615 | Msa0344540:CDS |
| GAGGTGAGGCGTGAAGCTAA+AGG | 0.509324 | 3_1:-3296785 | Msa0344540:CDS |
| TGGTGAAGATTCTGATGATT+CGG | 0.509906 | 3_1:-3301725 | Msa0344540:five_prime_UTR |
| AAGCTGGTCTAGCTGACGGT+GGG | 0.510032 | 3_1:-3303291 | Msa0344540:five_prime_UTR |
| AGGTCTGAAGATTCTGATGA+AGG | 0.511371 | 3_1:-3301700 | Msa0344540:five_prime_UTR |
| GAGAAACCAAGATCTCTCTC+TGG | 0.511990 | 3_1:-3301865 | Msa0344540:five_prime_UTR |
| GCTCATGGTATGCAGAGTCC+AGG | 0.514901 | 3_1:-3303316 | Msa0344540:five_prime_UTR |
| TGATTCTGTTGGAAGTGTAA+AGG | 0.516796 | 3_1:-3301462 | Msa0344540:five_prime_UTR |
| CACTTCTCTGGCTCATTCCG+AGG | 0.518270 | 3_1:-3302713 | Msa0344540:five_prime_UTR |
| CAGATATTTCAGATTTGGGC+CGG | 0.519443 | 3_1:-3303348 | Msa0344540:five_prime_UTR |
| AATCTGGACAACTAGGAAAA+GGG | 0.524082 | 3_1:-3296625 | Msa0344540:CDS |
| AAACTGTCAGTAGTGAAGAA+TGG | 0.525835 | 3_1:+3297533 | None:intergenic |
| TCAGCTAGACCAGCTTCCCC+TGG | 0.526667 | 3_1:+3303298 | None:intergenic |
| AAGGAATTGATGGTCTTGGA+AGG | 0.527484 | 3_1:-3303691 | Msa0344540:five_prime_UTR |
| CACATATTGCAGCAAAGTAT+GGG | 0.528243 | 3_1:+3300300 | None:intergenic |
| GCGGCAGAGGGTGGTGGAGA+AGG | 0.528431 | 3_1:+3304299 | None:intergenic |
| GCTTTCAAATCTGGACAACT+AGG | 0.529239 | 3_1:-3296632 | Msa0344540:CDS |
| AACAGACACATAAACATCCT+TGG | 0.529614 | 3_1:+3296316 | None:intergenic |
| AGAATTGGTGAGAATGATGA+AGG | 0.533838 | 3_1:-3303957 | Msa0344540:five_prime_UTR |
| GACAACAGAAGAGATTGCTC+AGG | 0.535238 | 3_1:-3302396 | Msa0344540:five_prime_UTR |
| GATAGTCACTTACAAAGTAA+TGG | 0.536245 | 3_1:+3296424 | None:intergenic |
| AGAACGTCTAGAGGAGTTGG+AGG | 0.537126 | 3_1:-3302366 | Msa0344540:intron |
| GGCCGGCGTCATAATGCTCA+TGG | 0.540640 | 3_1:-3303331 | Msa0344540:five_prime_UTR |
| GTGACCAGATTGACTCGAAT+GGG | 0.542975 | 3_1:+3304130 | None:intergenic |
| AGATACCAAAAGAATGGGGT+TGG | 0.543843 | 3_1:-3304070 | Msa0344540:five_prime_UTR |
| AGTCAGAGACAACAAGGCCT+CGG | 0.545810 | 3_1:+3302696 | None:intergenic |
| CTCATGGTATGCAGAGTCCA+GGG | 0.546926 | 3_1:-3303315 | Msa0344540:five_prime_UTR |
| TCGCACATCAATAGTATCAC+AGG | 0.550865 | 3_1:+3300012 | None:intergenic |
| TGGATGAACATCATACTTTG+AGG | 0.551930 | 3_1:-3297054 | Msa0344540:CDS |
| AGACATAGCGTCTTTGAAGA+AGG | 0.557041 | 3_1:+3300093 | None:intergenic |
| TCTGGCCGTGATATTGCCGT+TGG | 0.558685 | 3_1:-3299964 | Msa0344540:CDS |
| TCTCTCTCTGGTGATGACCT+TGG | 0.559106 | 3_1:-3301853 | Msa0344540:five_prime_UTR |
| GATACCAAGAAGATAGTCGT+TGG | 0.560935 | 3_1:-3301422 | Msa0344540:five_prime_UTR |
| CTATCACAGAAAGTAGCAGC+TGG | 0.562254 | 3_1:-3300116 | Msa0344540:intron |
| AACAGAAGAGATTGCTCAGG+AGG | 0.562649 | 3_1:-3302393 | Msa0344540:five_prime_UTR |
| GGTTAAAGAGACTAGAACAT+CGG | 0.563412 | 3_1:-3296492 | Msa0344540:intron |
| TGAAGAATTATGTTCACTGG+TGG | 0.563978 | 3_1:-3301342 | Msa0344540:CDS |
| GGGGAAGCTGGTCTAGCTGA+CGG | 0.571066 | 3_1:-3303295 | Msa0344540:five_prime_UTR |
| AAGAAGAAGAACAACAAGAT+GGG | 0.572092 | 3_1:-3304201 | Msa0344540:five_prime_UTR |
| TAGCTTTACCAAAATCATCA+AGG | 0.572384 | 3_1:+3303934 | None:intergenic |
| CCTGCTGGAAGGATTAGATA+AGG | 0.573153 | 3_1:-3302740 | Msa0344540:five_prime_UTR |
| ACCATTGATAGAGATGAGTA+CGG | 0.573361 | 3_1:-3300327 | Msa0344540:CDS |
| CGTGACCAGATTGACTCGAA+TGG | 0.575204 | 3_1:+3304129 | None:intergenic |
| GAAGCTGGTCTAGCTGACGG+TGG | 0.576068 | 3_1:-3303292 | Msa0344540:five_prime_UTR |
| GATTCTTGAGAGAAGAGATG+AGG | 0.577765 | 3_1:-3301776 | Msa0344540:five_prime_UTR |
| AATAAATGTTAAAACTTGTG+GGG | 0.578482 | 3_1:-3296575 | Msa0344540:three_prime_UTR |
| CAAGAGCTGAGAAGTATGGA+AGG | 0.580782 | 3_1:-3296685 | Msa0344540:CDS |
| GATATCAGTTCAGGTTCAGA+AGG | 0.581311 | 3_1:-3301607 | Msa0344540:five_prime_UTR |
| ACCTCTGTTGAAACCCTACA+AGG | 0.581709 | 3_1:-3297226 | Msa0344540:CDS |
| ACGGGATAAAATTAAAGATG+TGG | 0.582762 | 3_1:-3297098 | Msa0344540:CDS |
| AGTTTCTTCATCGACAGAGA+AGG | 0.583142 | 3_1:+3301825 | None:intergenic |
| TTCACTCGAATCTTCAGCAG+CGG | 0.584454 | 3_1:+3301921 | None:intergenic |
| GGAGGAAAGAGAACGTCTAG+AGG | 0.587808 | 3_1:-3302375 | Msa0344540:five_prime_UTR |
| GACCACGGGGAGTAAAATGT+TGG | 0.589565 | 3_1:-3296162 | Msa0344540:intron |
| GTTGTCTTCAGCCTATCTGA+AGG | 0.592574 | 3_1:+3302413 | None:intergenic |
| GTTCTCTTGCTATTGAGAAG+AGG | 0.593841 | 3_1:-3304039 | Msa0344540:five_prime_UTR |
| CAGTGAACATAATTCTTCAA+AGG | 0.594264 | 3_1:+3301346 | None:intergenic |
| CCTTATCTAATCCTTCCAGC+AGG | 0.597560 | 3_1:+3302740 | None:intergenic |
| TCTCTTGCGATTGTGGTCCA+TGG | 0.601430 | 3_1:-3300073 | Msa0344540:CDS |
| ATCGGAACATGGAAATACCA+TGG | 0.602060 | 3_1:+3300056 | None:intergenic |
| AATTCTTCTATCAATAAACT+CGG | 0.602106 | 3_1:+3303974 | None:intergenic |
| GAAGATGATGATATCAGTGC+TGG | 0.602350 | 3_1:-3301583 | Msa0344540:five_prime_UTR |
| TACCATGAGCATTATGACGC+CGG | 0.604868 | 3_1:+3303329 | None:intergenic |
| TCCTTGTAGGGTTTCAACAG+AGG | 0.609177 | 3_1:+3297225 | None:intergenic |
| ACCAAGAAGATAGTCGTTGG+AGG | 0.610706 | 3_1:-3301419 | Msa0344540:five_prime_UTR |
| AAGAACCAACGGCAATATCA+CGG | 0.614085 | 3_1:+3299959 | None:intergenic |
| GATGAAGATGATGACGAGGA+CGG | 0.614923 | 3_1:-3301553 | Msa0344540:five_prime_UTR |
| ACAGAGACATAAAACCAAGA+AGG | 0.615445 | 3_1:-3302930 | Msa0344540:intron |
| AAAGATGAAGACCTGCTGGA+AGG | 0.616144 | 3_1:-3302751 | Msa0344540:five_prime_UTR |
| GGTGAGGCGTGAAGCTAAAG+GGG | 0.618945 | 3_1:-3296783 | Msa0344540:CDS |
| TGGTTCAGTCAGAGACAACA+AGG | 0.620464 | 3_1:+3302690 | None:intergenic |
| TGCGTGCTCGTCCTTCAGAT+AGG | 0.623838 | 3_1:-3302424 | Msa0344540:five_prime_UTR |
| AGATTCTGATGAAGGATCTG+AGG | 0.625208 | 3_1:-3301692 | Msa0344540:five_prime_UTR |
| AGGAATTGATGGTCTTGGAA+GGG | 0.625979 | 3_1:-3303690 | Msa0344540:five_prime_UTR |
| TCTCCTTCAAATAATATGTG+GGG | 0.628876 | 3_1:+3296460 | None:intergenic |
| TCGAAGTAATGGGTCAGAAG+CGG | 0.631084 | 3_1:-3304098 | Msa0344540:five_prime_UTR |
| AGCTGGTCTAGCTGACGGTG+GGG | 0.637224 | 3_1:-3303290 | Msa0344540:five_prime_UTR |
| GAGAGAAGAGATGAGGAGGA+GGG | 0.637619 | 3_1:-3301769 | Msa0344540:five_prime_UTR |
| GGATGTCTAAAATCGGAACA+TGG | 0.639818 | 3_1:+3300045 | None:intergenic |
| AAGATTCTGATGATTCGGAA+AGG | 0.644071 | 3_1:-3301720 | Msa0344540:five_prime_UTR |
| TCGAAACGCAGCATCGCCAA+CGG | 0.648466 | 3_1:-3304246 | Msa0344540:five_prime_UTR |
| TGAGCTGATTAAGTTGAAAG+TGG | 0.649315 | 3_1:-3297074 | Msa0344540:CDS |
| TGAGGCGACCACTTCAAATG+CGG | 0.651913 | 3_1:-3297036 | Msa0344540:CDS |
| GTAATGGGTCAGAAGCGGAA+AGG | 0.654267 | 3_1:-3304093 | Msa0344540:five_prime_UTR |
| TCTTCTAGTGAAGATGATGA+TGG | 0.654306 | 3_1:-3301745 | Msa0344540:five_prime_UTR |
| AGAACATAAGAAAGAACCAA+CGG | 0.656060 | 3_1:+3299948 | None:intergenic |
| GAAGATGATGATGAAACTGA+TGG | 0.670632 | 3_1:-3303641 | Msa0344540:intron |
| CGACAGAGAAGGAATCGCCA+AGG | 0.671556 | 3_1:+3301836 | None:intergenic |
| TCGAGTCAATCTGGTCACGT+AGG | 0.674124 | 3_1:-3304125 | Msa0344540:five_prime_UTR |
| TTTGAAGGAGAGAAACACAA+TGG | 0.680469 | 3_1:-3296448 | Msa0344540:three_prime_UTR |
| ATTCATCCTTCTAAACACCA+AGG | 0.684668 | 3_1:-3296333 | Msa0344540:three_prime_UTR |
| TCATGGTATGCAGAGTCCAG+GGG | 0.687360 | 3_1:-3303314 | Msa0344540:five_prime_UTR |
| AGAAGATGAAGATGATGACG+AGG | 0.691743 | 3_1:-3301557 | Msa0344540:five_prime_UTR |
| AAGGAGATACCAAAAGAATG+GGG | 0.729442 | 3_1:-3304074 | Msa0344540:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAAAAAAAA+AGG | + | chr3_1:3301257-3301276 | None:intergenic | 0.0% |
| !! | AAAAAGAAAAAAAAAAAACA+GGG | + | chr3_1:3299696-3299715 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCTTTTTCT+AGG | - | chr3_1:3299698-3299717 | Msa0344540:intron | 10.0% |
| !!! | AACTTGTTTTAATTAATTTT+AGG | + | chr3_1:3299808-3299827 | None:intergenic | 10.0% |
| !!! | TTTACTTTTGAATTTTTTAT+AGG | - | chr3_1:3300671-3300690 | Msa0344540:intron | 10.0% |
| !!! | TTTTATAATATACATAGTAT+AGG | + | chr3_1:3301961-3301980 | None:intergenic | 10.0% |
| !!! | AAGATTTTAGAATATTAAAT+CGG | - | chr3_1:3302215-3302234 | Msa0344540:intron | 10.0% |
| !! | TAAACATAATATTAATGATA+TGG | - | chr3_1:3302297-3302316 | Msa0344540:intron | 10.0% |
| !! | AAAAATGCAAAAATAAAGAA+TGG | + | chr3_1:3296162-3296181 | None:intergenic | 15.0% |
| !!! | ATTAATTCACAAAATTTTCA+AGG | + | chr3_1:3296754-3296773 | None:intergenic | 15.0% |
| !! | AAGTTAATTATCAAATTATC+AGG | + | chr3_1:3297037-3297056 | None:intergenic | 15.0% |
| !!! | TGATAATTTGATAATTAACT+TGG | - | chr3_1:3297036-3297055 | Msa0344540:CDS | 15.0% |
| !!! | TGTTATATTAAACTTTTATG+TGG | - | chr3_1:3299460-3299479 | Msa0344540:intron | 15.0% |
| !! | AAAAGAAAAAAAAAAAACAG+GGG | + | chr3_1:3299695-3299714 | None:intergenic | 15.0% |
| !! | GAAAAAGAAAAAAAAAAAAC+AGG | + | chr3_1:3299697-3299716 | None:intergenic | 15.0% |
| !!! | AATGTTTTCTTGTATTTTAT+TGG | + | chr3_1:3299746-3299765 | None:intergenic | 15.0% |
| !! | AATTTGAACAAAAAACTTAA+AGG | + | chr3_1:3300746-3300765 | None:intergenic | 15.0% |
| !!! | TTTAAGTTTTTTGTTCAAAT+TGG | - | chr3_1:3300745-3300764 | Msa0344540:intron | 15.0% |
| !! | TTTGTAACAAAAAAACTTAA+AGG | - | chr3_1:3301182-3301201 | Msa0344540:intron | 15.0% |
| !! | TATAGATTTACATAAAGAAT+TGG | + | chr3_1:3301353-3301372 | None:intergenic | 15.0% |
| !! | AAAGTTTGAATAAATACTAT+TGG | + | chr3_1:3301577-3301596 | None:intergenic | 15.0% |
| !! | TGTTTGTATTTATTTATGTA+TGG | - | chr3_1:3301721-3301740 | Msa0344540:five_prime_UTR | 15.0% |
| !!! | AGATTTTAGAATATTAAATC+GGG | - | chr3_1:3302216-3302235 | Msa0344540:intron | 15.0% |
| !!! | TTCATCCTTTTTTTTTTTTA+CGG | + | chr3_1:3302559-3302578 | None:intergenic | 15.0% |
| !!! | AAAACTTTTCTCTTATATTT+AGG | - | chr3_1:3304365-3304384 | Msa0344540:five_prime_UTR | 15.0% |
| !! | AATTCTTCTATCAATAAACT+CGG | + | chr3_1:3296578-3296597 | None:intergenic | 20.0% |
| !! | TACCTAATATAACATGTTAA+TGG | - | chr3_1:3296958-3296977 | Msa0344540:intron | 20.0% |
| !! | AACCATTAACATGTTATATT+AGG | + | chr3_1:3296963-3296982 | None:intergenic | 20.0% |
| !! | TAAAACAAACAGTATAAACA+TGG | + | chr3_1:3297091-3297110 | None:intergenic | 20.0% |
| !! | CATTTGTGAAAAGTTTAAAA+AGG | + | chr3_1:3297549-3297568 | None:intergenic | 20.0% |
| !! | CTTATAAAAAGAAGATATCA+GGG | + | chr3_1:3298022-3298041 | None:intergenic | 20.0% |
| !! | TCTTATAAAAAGAAGATATC+AGG | + | chr3_1:3298023-3298042 | None:intergenic | 20.0% |
| !! | ATCCATAATTTCAGAAAAAA+CGG | - | chr3_1:3298592-3298611 | Msa0344540:intron | 20.0% |
| !! | TAATATAACAGTTGAAACTT+GGG | + | chr3_1:3299450-3299469 | None:intergenic | 20.0% |
| !! | TTAATATAACAGTTGAAACT+TGG | + | chr3_1:3299451-3299470 | None:intergenic | 20.0% |
| !! | AAATTGAGAGAAAAAAGAAT+TGG | - | chr3_1:3299633-3299652 | Msa0344540:intron | 20.0% |
| !!! | AATTTTAGGTGCTATATAAT+GGG | + | chr3_1:3299794-3299813 | None:intergenic | 20.0% |
| !!! | TAATTTTAGGTGCTATATAA+TGG | + | chr3_1:3299795-3299814 | None:intergenic | 20.0% |
| !! | TGATATAATCTAGTTAATAG+AGG | - | chr3_1:3299842-3299861 | Msa0344540:intron | 20.0% |
| !!! | GTTTAATTTGAAAAAGTTCA+TGG | - | chr3_1:3299895-3299914 | Msa0344540:intron | 20.0% |
| !! | AAGTTCCTCATAAAATATTT+AGG | + | chr3_1:3300057-3300076 | None:intergenic | 20.0% |
| !! | AATACCTGAAAAGATAAATA+CGG | + | chr3_1:3300121-3300140 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCAGGTATTTTA+TGG | - | chr3_1:3300124-3300143 | Msa0344540:intron | 20.0% |
| !! | ATAGTTCTTGATAAAAGTTA+AGG | + | chr3_1:3300369-3300388 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGAACTATGAAT+TGG | - | chr3_1:3300373-3300392 | Msa0344540:CDS | 20.0% |
| !! | AAAAAACTTAAAGGACTTAT+TGG | + | chr3_1:3300737-3300756 | None:intergenic | 20.0% |
| !!! | CGTAAGTAATCATTTTAATA+AGG | + | chr3_1:3300908-3300927 | None:intergenic | 20.0% |
| !!! | CAGATATTTTATGACTTAAA+AGG | - | chr3_1:3301154-3301173 | Msa0344540:intron | 20.0% |
| !! | GTTATAAACATCTAACTTAA+AGG | - | chr3_1:3301213-3301232 | Msa0344540:intron | 20.0% |
| !!! | CTTTCTAAGATCTTTTTTAT+TGG | - | chr3_1:3301416-3301435 | Msa0344540:five_prime_UTR | 20.0% |
| !! | AGAAACTAATTACTGAAAAA+GGG | - | chr3_1:3302157-3302176 | Msa0344540:intron | 20.0% |
| !! | TGATGAATATCAAACTAATT+TGG | - | chr3_1:3302269-3302288 | Msa0344540:intron | 20.0% |
| !!! | AGTTAATTAGGTTGTATATT+TGG | + | chr3_1:3302496-3302515 | None:intergenic | 20.0% |
| !! | ATATCTTATCTGTATTTCAA+GGG | + | chr3_1:3302676-3302695 | None:intergenic | 20.0% |
| !! | AATATCTTATCTGTATTTCA+AGG | + | chr3_1:3302677-3302696 | None:intergenic | 20.0% |
| !! | GATATATAATATCATGCATA+TGG | - | chr3_1:3302807-3302826 | Msa0344540:intron | 20.0% |
| !! | GCTATGATAACAAATATAAA+TGG | + | chr3_1:3303161-3303180 | None:intergenic | 20.0% |
| !! | AAATTGGTGAAAATATTTCT+GGG | + | chr3_1:3303382-3303401 | None:intergenic | 20.0% |
| !! | AAAATTGGTGAAAATATTTC+TGG | + | chr3_1:3303383-3303402 | None:intergenic | 20.0% |
| !! | TGAATAAATGTTAAAACTTG+TGG | - | chr3_1:3303972-3303991 | Msa0344540:five_prime_UTR | 20.0% |
| !! | GAATAAATGTTAAAACTTGT+GGG | - | chr3_1:3303973-3303992 | Msa0344540:five_prime_UTR | 20.0% |
| !! | AATAAATGTTAAAACTTGTG+GGG | - | chr3_1:3303974-3303993 | Msa0344540:five_prime_UTR | 20.0% |
| !! | AGAATGTTCTCTTATATTTA+GGG | + | chr3_1:3304265-3304284 | None:intergenic | 20.0% |
| !! | AAGAATGTTCTCTTATATTT+AGG | + | chr3_1:3304266-3304285 | None:intergenic | 20.0% |
| ! | AACTAGAGAAGAAAGAATTA+GGG | + | chr3_1:3296201-3296220 | None:intergenic | 25.0% |
| ! | AAACTAGAGAAGAAAGAATT+AGG | + | chr3_1:3296202-3296221 | None:intergenic | 25.0% |
| ! | GAGTTTATTGATAGAAGAAT+TGG | - | chr3_1:3296577-3296596 | Msa0344540:three_prime_UTR | 25.0% |
| !! | TTAATGGTTTATTTGCTGAT+TGG | - | chr3_1:3296974-3296993 | Msa0344540:intron | 25.0% |
| ! | TTTGAACTCTAATTAGCTAT+TGG | - | chr3_1:3297008-3297027 | Msa0344540:CDS | 25.0% |
| !! | TTTTGCAGATATTTCAGATT+TGG | - | chr3_1:3297196-3297215 | Msa0344540:CDS | 25.0% |
| ! | TTTGCAGATATTTCAGATTT+GGG | - | chr3_1:3297197-3297216 | Msa0344540:CDS | 25.0% |
| ! | ATATTCCAACTTTCTCTTTA+TGG | - | chr3_1:3298050-3298069 | Msa0344540:intron | 25.0% |
| ! | TGAAGAAACTATGACTAAAA+AGG | - | chr3_1:3298737-3298756 | Msa0344540:intron | 25.0% |
| ! | GAAGAAACTATGACTAAAAA+GGG | - | chr3_1:3298738-3298757 | Msa0344540:intron | 25.0% |
| !! | AGAATACTACTTTGAAAGAT+TGG | - | chr3_1:3298901-3298920 | Msa0344540:intron | 25.0% |
| !! | GAATACTACTTTGAAAGATT+GGG | - | chr3_1:3298902-3298921 | Msa0344540:intron | 25.0% |
| ! | ACACTATCTTAATCATCAAT+CGG | - | chr3_1:3299248-3299267 | Msa0344540:intron | 25.0% |
| !! | TATTCCATTTACAATTTTGC+TGG | - | chr3_1:3299541-3299560 | Msa0344540:intron | 25.0% |
| ! | AAAGAATTGGTCAACATATA+TGG | - | chr3_1:3299646-3299665 | Msa0344540:intron | 25.0% |
| !!! | ATTTTATTGGTTGTTAAGCA+GGG | + | chr3_1:3299733-3299752 | None:intergenic | 25.0% |
| !!! | TATTTTATTGGTTGTTAAGC+AGG | + | chr3_1:3299734-3299753 | None:intergenic | 25.0% |
| ! | ATAATCTAGTTAATAGAGGT+TGG | - | chr3_1:3299846-3299865 | Msa0344540:intron | 25.0% |
| !!! | AATAGACTAATTTGCTTAGT+TGG | - | chr3_1:3300003-3300022 | Msa0344540:CDS | 25.0% |
| !! | CTGTTCCTAAATATTTTATG+AGG | - | chr3_1:3300049-3300068 | Msa0344540:CDS | 25.0% |
| !! | ATAACCGTATTTATCTTTTC+AGG | - | chr3_1:3300114-3300133 | Msa0344540:intron | 25.0% |
| ! | GTTATAAACGTCTAACTTAA+AGG | + | chr3_1:3300715-3300734 | None:intergenic | 25.0% |
| ! | TTGTAACAGAAAAAACTTAC+AGG | + | chr3_1:3300772-3300791 | None:intergenic | 25.0% |
| !! | ACAAAGTTGGTTGAAAAAAT+GGG | + | chr3_1:3300831-3300850 | None:intergenic | 25.0% |
| !! | AACAAAGTTGGTTGAAAAAA+TGG | + | chr3_1:3300832-3300851 | None:intergenic | 25.0% |
| ! | TCATGGATCATTTAACATTA+AGG | - | chr3_1:3300861-3300880 | Msa0344540:intron | 25.0% |
| !! | GTTTGATGAAAGTATGATAA+TGG | - | chr3_1:3301129-3301148 | Msa0344540:intron | 25.0% |
| ! | TGATTTCTACCATTAAAAAG+TGG | - | chr3_1:3301320-3301339 | Msa0344540:CDS | 25.0% |
| ! | GATTTACATAAAGAATTGGA+AGG | + | chr3_1:3301349-3301368 | None:intergenic | 25.0% |
| !!! | TGAATAAATACTATTGGTTC+AGG | + | chr3_1:3301571-3301590 | None:intergenic | 25.0% |
| ! | TGATATATGTTTACTTTCAG+TGG | + | chr3_1:3301611-3301630 | None:intergenic | 25.0% |
| !! | CATTTTCTTGTATATTCTAC+TGG | - | chr3_1:3301893-3301912 | Msa0344540:five_prime_UTR | 25.0% |
| ! | ACTAACGAAAAAGATAAAAG+GGG | + | chr3_1:3301921-3301940 | None:intergenic | 25.0% |
| ! | CACTAACGAAAAAGATAAAA+GGG | + | chr3_1:3301922-3301941 | None:intergenic | 25.0% |
| ! | ACACTAACGAAAAAGATAAA+AGG | + | chr3_1:3301923-3301942 | None:intergenic | 25.0% |
| !! | GAAAAAGAAAATGCTGTTTA+CGG | - | chr3_1:3301998-3302017 | Msa0344540:intron | 25.0% |
| ! | GAGAAACTAATTACTGAAAA+AGG | - | chr3_1:3302156-3302175 | Msa0344540:intron | 25.0% |
| ! | GAAACTAATTACTGAAAAAG+GGG | - | chr3_1:3302158-3302177 | Msa0344540:intron | 25.0% |
| !!! | ATTAAATCGGGTTAGTTTTT+TGG | - | chr3_1:3302228-3302247 | Msa0344540:intron | 25.0% |
| ! | ATATTAATGATATGGACTTC+TGG | - | chr3_1:3302305-3302324 | Msa0344540:intron | 25.0% |
| !!! | TAATGAAACACAATTTGTTG+GGG | + | chr3_1:3302523-3302542 | None:intergenic | 25.0% |
| !! | GTAATGAAACACAATTTGTT+GGG | + | chr3_1:3302524-3302543 | None:intergenic | 25.0% |
| ! | TGTAATGAAACACAATTTGT+TGG | + | chr3_1:3302525-3302544 | None:intergenic | 25.0% |
| ! | GATGTCCGTAAAAAAAAAAA+AGG | - | chr3_1:3302551-3302570 | Msa0344540:intron | 25.0% |
| ! | TGTTTCATAAAACCTTTCAT+TGG | - | chr3_1:3302587-3302606 | Msa0344540:five_prime_UTR | 25.0% |
| ! | TTCAAAACAACATTAAAGGT+AGG | + | chr3_1:3302629-3302648 | None:intergenic | 25.0% |
| ! | ACGTTTCAAAACAACATTAA+AGG | + | chr3_1:3302633-3302652 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTGTGAACTTAA+AGG | + | chr3_1:3302727-3302746 | None:intergenic | 25.0% |
| ! | CATGATATTATATATCATGC+AGG | + | chr3_1:3302803-3302822 | None:intergenic | 25.0% |
| !! | GTAACATTTTTCTTGCAAAA+AGG | + | chr3_1:3303064-3303083 | None:intergenic | 25.0% |
| ! | AGATTGACTACAAAATATCA+TGG | + | chr3_1:3303089-3303108 | None:intergenic | 25.0% |
| ! | TGATAACAAATATAAATGGC+AGG | + | chr3_1:3303157-3303176 | None:intergenic | 25.0% |
| ! | CTATGATCTTATAACTGATA+TGG | - | chr3_1:3303180-3303199 | Msa0344540:intron | 25.0% |
| !!! | GAAATGTTTTTCAAATACTG+TGG | - | chr3_1:3303245-3303264 | Msa0344540:intron | 25.0% |
| !!! | AATTATGCTTTTTCGATTAC+AGG | - | chr3_1:3303285-3303304 | Msa0344540:five_prime_UTR | 25.0% |
| !!! | ATTATGCTTTTTCGATTACA+GGG | - | chr3_1:3303286-3303305 | Msa0344540:five_prime_UTR | 25.0% |
| ! | TCAAGTAGTAATCTCAAAAT+TGG | + | chr3_1:3303398-3303417 | None:intergenic | 25.0% |
| ! | AAAATATGCCAAATGCATTA+CGG | - | chr3_1:3303432-3303451 | Msa0344540:intron | 25.0% |
| ! | TTAGGATTCAGTAATTTGAT+TGG | + | chr3_1:3303554-3303573 | None:intergenic | 25.0% |
| ! | CATATTACCAAATTGAAACA+TGG | + | chr3_1:3303606-3303625 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATTGAAGAGAG+AGG | - | chr3_1:3303745-3303764 | Msa0344540:five_prime_UTR | 25.0% |
| !!! | CGTTTTTTGAATACTAATGT+TGG | - | chr3_1:3304036-3304055 | Msa0344540:five_prime_UTR | 25.0% |
| !!! | TAAGAGAACATTCTTTTTTC+AGG | - | chr3_1:3304271-3304290 | Msa0344540:five_prime_UTR | 25.0% |
| AAGAAGAAGAACAACAAGAT+GGG | - | chr3_1:3296348-3296367 | Msa0344540:three_prime_UTR | 30.0% | |
| !! | TTTTTGAGCTTTTGCTTTCA+TGG | + | chr3_1:3296388-3296407 | None:intergenic | 30.0% |
| AAAGGAGATACCAAAAGAAT+GGG | - | chr3_1:3296474-3296493 | Msa0344540:three_prime_UTR | 30.0% | |
| ! | TAGCTTTACCAAAATCATCA+AGG | + | chr3_1:3296618-3296637 | None:intergenic | 30.0% |
| ! | TTTTCAGAAACAGTTGTCAA+TGG | + | chr3_1:3296696-3296715 | None:intergenic | 30.0% |
| GATGAATTTGAAGGAATTGA+TGG | - | chr3_1:3296848-3296867 | Msa0344540:CDS | 30.0% | |
| ! | TTTATTTGCTGATTGGAACT+TGG | - | chr3_1:3296981-3297000 | Msa0344540:intron | 30.0% |
| ATTTCTGTTTCAGTGACTAT+AGG | - | chr3_1:3297501-3297520 | Msa0344540:intron | 30.0% | |
| TTTCTGTTTCAGTGACTATA+GGG | - | chr3_1:3297502-3297521 | Msa0344540:intron | 30.0% | |
| ! | TGCAAAAAGCAAGTTTTACA+AGG | - | chr3_1:3297661-3297680 | Msa0344540:intron | 30.0% |
| TGTGCGATATTTCTTAAATC+AGG | - | chr3_1:3297684-3297703 | Msa0344540:intron | 30.0% | |
| GTGCGATATTTCTTAAATCA+GGG | - | chr3_1:3297685-3297704 | Msa0344540:intron | 30.0% | |
| ! | CTTTCACTCTAATATTTTCC+AGG | - | chr3_1:3297752-3297771 | Msa0344540:intron | 30.0% |
| TTCAAAGCTTTCATCTTGTT+TGG | + | chr3_1:3297882-3297901 | None:intergenic | 30.0% | |
| ! | AAACAAGATGAAAGCTTTGA+AGG | - | chr3_1:3297881-3297900 | Msa0344540:intron | 30.0% |
| GACAATGAATAATTCTGTTC+AGG | - | chr3_1:3297965-3297984 | Msa0344540:intron | 30.0% | |
| !!! | ATGGTTTAGATGACTTGTTT+TGG | - | chr3_1:3298335-3298354 | Msa0344540:intron | 30.0% |
| !!! | TGCCGTTTTTTCTGAAATTA+TGG | + | chr3_1:3298597-3298616 | None:intergenic | 30.0% |
| AAACTATGACTAAAAAGGGT+TGG | - | chr3_1:3298742-3298761 | Msa0344540:intron | 30.0% | |
| AACTATGACTAAAAAGGGTT+GGG | - | chr3_1:3298743-3298762 | Msa0344540:intron | 30.0% | |
| AAGGTAAAAGGATTGAATGT+TGG | - | chr3_1:3299041-3299060 | Msa0344540:intron | 30.0% | |
| AGGTAAAAGGATTGAATGTT+GGG | - | chr3_1:3299042-3299061 | Msa0344540:intron | 30.0% | |
| AGCAAAAGAAATGATTCTGT+TGG | - | chr3_1:3299076-3299095 | Msa0344540:intron | 30.0% | |
| TTCGGAGCTTCAATTATATA+AGG | + | chr3_1:3299181-3299200 | None:intergenic | 30.0% | |
| CATAATTCTTCAAAGGTCTT+CGG | + | chr3_1:3299199-3299218 | None:intergenic | 30.0% | |
| CAGTGAACATAATTCTTCAA+AGG | + | chr3_1:3299206-3299225 | None:intergenic | 30.0% | |
| ! | CTTTGAAGAATTATGTTCAC+TGG | - | chr3_1:3299204-3299223 | Msa0344540:intron | 30.0% |
| TCTTAATCATCAATCGGATT+CGG | - | chr3_1:3299254-3299273 | Msa0344540:intron | 30.0% | |
| TGCTACAATTATTCCCTATA+GGG | - | chr3_1:3299564-3299583 | Msa0344540:intron | 30.0% | |
| ! | CAATTTCTACAAGTCTTGTA+GGG | + | chr3_1:3299619-3299638 | None:intergenic | 30.0% |
| ! | TCAATTTCTACAAGTCTTGT+AGG | + | chr3_1:3299620-3299639 | None:intergenic | 30.0% |
| !! | TTTTATTGGTTGTTAAGCAG+GGG | + | chr3_1:3299732-3299751 | None:intergenic | 30.0% |
| ! | TAAATCTGAGTATTGCAAAC+TGG | + | chr3_1:3299984-3300003 | None:intergenic | 30.0% |
| !!! | ATTGCAGTATTTTGCTGTTT+TGG | - | chr3_1:3300153-3300172 | Msa0344540:intron | 30.0% |
| ! | CATAACTGGATGTCTAAAAT+CGG | + | chr3_1:3300514-3300533 | None:intergenic | 30.0% |
| AGAACATAAGAAAGAACCAA+CGG | + | chr3_1:3300604-3300623 | None:intergenic | 30.0% | |
| TGAGCACTATTTAACAAAGT+TGG | + | chr3_1:3300844-3300863 | None:intergenic | 30.0% | |
| ACTTTGTTAAATAGTGCTCA+TGG | - | chr3_1:3300844-3300863 | Msa0344540:intron | 30.0% | |
| TGGATCATTTAACATTAAGG+TGG | - | chr3_1:3300864-3300883 | Msa0344540:intron | 30.0% | |
| TCATTTAACATTAAGGTGGT+AGG | - | chr3_1:3300868-3300887 | Msa0344540:intron | 30.0% | |
| GTGGACATTTAATCTTAAGT+TGG | + | chr3_1:3301090-3301109 | None:intergenic | 30.0% | |
| GTTATCACCATTCATCAATA+AGG | - | chr3_1:3301279-3301298 | Msa0344540:CDS | 30.0% | |
| ATCAGATCCTTATTGATGAA+TGG | + | chr3_1:3301289-3301308 | None:intergenic | 30.0% | |
| TTATATTCATTGTGTGAGCA+AGG | + | chr3_1:3301514-3301533 | None:intergenic | 30.0% | |
| ACACAATGAATATAAAACGC+AGG | - | chr3_1:3301519-3301538 | Msa0344540:five_prime_UTR | 30.0% | |
| TATATCATGCGAAAATTCTC+AGG | - | chr3_1:3301624-3301643 | Msa0344540:five_prime_UTR | 30.0% | |
| TAAATACAAACATATGCGCA+TGG | + | chr3_1:3301713-3301732 | None:intergenic | 30.0% | |
| ! | ACAGCATTTTCTTTTTCTAC+TGG | + | chr3_1:3301995-3302014 | None:intergenic | 30.0% |
| ATAATTTCCATTAGAGACGT+AGG | + | chr3_1:3302130-3302149 | None:intergenic | 30.0% | |
| CTCTAATGGAAATTATGCTA+AGG | - | chr3_1:3302134-3302153 | Msa0344540:intron | 30.0% | |
| !! | AGTTGATTCAACTTTTCTTG+TGG | - | chr3_1:3302398-3302417 | Msa0344540:five_prime_UTR | 30.0% |
| TAATATTAAGTGCGAGATCT+TGG | + | chr3_1:3302462-3302481 | None:intergenic | 30.0% | |
| TGTTGGGGTAAAAGTTAATT+AGG | + | chr3_1:3302508-3302527 | None:intergenic | 30.0% | |
| !! | ACTGTTTTTCATCCAATGAA+AGG | + | chr3_1:3302602-3302621 | None:intergenic | 30.0% |
| TTTCATTGGATGAAAAACAG+TGG | - | chr3_1:3302601-3302620 | Msa0344540:five_prime_UTR | 30.0% | |
| ATTATCCAACCATAACATTC+TGG | + | chr3_1:3302853-3302872 | None:intergenic | 30.0% | |
| GTTCCATAAGATGATATAAC+TGG | + | chr3_1:3302901-3302920 | None:intergenic | 30.0% | |
| GCAAAAAGGTGGTAATAAAT+TGG | + | chr3_1:3303050-3303069 | None:intergenic | 30.0% | |
| ! | ACATTTTTCTTGCAAAAAGG+TGG | + | chr3_1:3303061-3303080 | None:intergenic | 30.0% |
| AAATATGCCAAATGCATTAC+GGG | - | chr3_1:3303433-3303452 | Msa0344540:intron | 30.0% | |
| ! | ATTTTATCCCGTAATGCATT+TGG | + | chr3_1:3303443-3303462 | None:intergenic | 30.0% |
| ACGGGATAAAATTAAAGATG+TGG | - | chr3_1:3303451-3303470 | Msa0344540:intron | 30.0% | |
| TTCAGTAATTTGATTGGAAC+TGG | + | chr3_1:3303548-3303567 | None:intergenic | 30.0% | |
| ATTACTGAATCCTAAGTTTG+AGG | - | chr3_1:3303559-3303578 | Msa0344540:intron | 30.0% | |
| !! | ACTTACTTTTCCTCAAACTT+AGG | + | chr3_1:3303572-3303591 | None:intergenic | 30.0% |
| ATTGAAACATGGAAAACAGA+AGG | + | chr3_1:3303595-3303614 | None:intergenic | 30.0% | |
| ! | CTGTTTTCCATGTTTCAATT+TGG | - | chr3_1:3303596-3303615 | Msa0344540:intron | 30.0% |
| TTGATGTGAAGGAAAAAGAA+AGG | - | chr3_1:3303825-3303844 | Msa0344540:intron | 30.0% | |
| GGAAAAAGAAAGGTCTTTAA+TGG | - | chr3_1:3303835-3303854 | Msa0344540:intron | 30.0% | |
| TCTCCTTCAAATAATATGTG+GGG | + | chr3_1:3304092-3304111 | None:intergenic | 30.0% | |
| CTCTCCTTCAAATAATATGT+GGG | + | chr3_1:3304093-3304112 | None:intergenic | 30.0% | |
| TCTCTCCTTCAAATAATATG+TGG | + | chr3_1:3304094-3304113 | None:intergenic | 30.0% | |
| GATAGTCACTTACAAAGTAA+TGG | + | chr3_1:3304128-3304147 | None:intergenic | 30.0% | |
| TTTCAACTTTAGTTAGTCAC+TGG | - | chr3_1:3304173-3304192 | Msa0344540:five_prime_UTR | 30.0% | |
| ! | TTCTCTTATATTTAGGACCA+CGG | - | chr3_1:3304372-3304391 | Msa0344540:five_prime_UTR | 30.0% |
| GAAGAAGAAGAACAACAAGA+TGG | - | chr3_1:3296347-3296366 | Msa0344540:three_prime_UTR | 35.0% | |
| GAAAGGAGATACCAAAAGAA+TGG | - | chr3_1:3296473-3296492 | Msa0344540:three_prime_UTR | 35.0% | |
| AAGGAGATACCAAAAGAATG+GGG | - | chr3_1:3296475-3296494 | Msa0344540:three_prime_UTR | 35.0% | |
| ATCAATAAACTCGGACGATT+TGG | + | chr3_1:3296569-3296588 | None:intergenic | 35.0% | |
| AGAATTGGTGAGAATGATGA+AGG | - | chr3_1:3296592-3296611 | Msa0344540:exon | 35.0% | |
| ! | GACGATGATGATGAATTTGA+AGG | - | chr3_1:3296839-3296858 | Msa0344540:CDS | 35.0% |
| ! | TTTGAAGGAATTGATGGTCT+TGG | - | chr3_1:3296854-3296873 | Msa0344540:intron | 35.0% |
| ! | ACTTTGAAGATGAGATGCTT+CGG | - | chr3_1:3296885-3296904 | Msa0344540:intron | 35.0% |
| ! | GAAGATGATGATGAAACTGA+TGG | - | chr3_1:3296908-3296927 | Msa0344540:intron | 35.0% |
| CGTCACAAAAATAACACAAC+AGG | + | chr3_1:3297156-3297175 | None:intergenic | 35.0% | |
| !! | TAGATTACAGAAAGCACTCA+TGG | + | chr3_1:3297329-3297348 | None:intergenic | 35.0% |
| TCTCTCTTATGCCAATTTGA+GGG | + | chr3_1:3297394-3297413 | None:intergenic | 35.0% | |
| TTCTCTCTTATGCCAATTTG+AGG | + | chr3_1:3297395-3297414 | None:intergenic | 35.0% | |
| GTCACTGAAACAGAAATAAC+TGG | + | chr3_1:3297498-3297517 | None:intergenic | 35.0% | |
| !!! | TCTTGGTTTTATGTCTCTGT+AGG | + | chr3_1:3297619-3297638 | None:intergenic | 35.0% |
| ACAGAGACATAAAACCAAGA+AGG | - | chr3_1:3297619-3297638 | Msa0344540:CDS | 35.0% | |
| !!! | TTTCTTTTGCTTTTTCAGCC+TGG | + | chr3_1:3297773-3297792 | None:intergenic | 35.0% |
| GGCTGAAAAAGCAAAAGAAA+AGG | - | chr3_1:3297773-3297792 | Msa0344540:intron | 35.0% | |
| ! | AAGATAGCTTGTCTGCTAAA+CGG | - | chr3_1:3297943-3297962 | Msa0344540:intron | 35.0% |
| GTACCATTATTTATCCTCGA+GGG | - | chr3_1:3297987-3298006 | Msa0344540:intron | 35.0% | |
| !! | ACAAGTTGGTCATATTCATC+TGG | + | chr3_1:3298085-3298104 | None:intergenic | 35.0% |
| GATTAACTGATCTCCAATCT+TGG | - | chr3_1:3298287-3298306 | Msa0344540:intron | 35.0% | |
| CTCAGATATACAACCAAGAT+TGG | + | chr3_1:3298303-3298322 | None:intergenic | 35.0% | |
| !!! | ATCTGAGCTTCGTTTTAAGA+TGG | - | chr3_1:3298316-3298335 | Msa0344540:intron | 35.0% |
| TTTGGCCAAAGTGTATAAAC+AGG | - | chr3_1:3298353-3298372 | Msa0344540:intron | 35.0% | |
| TTGGCCAAAGTGTATAAACA+GGG | - | chr3_1:3298354-3298373 | Msa0344540:intron | 35.0% | |
| TCATCCCTGTTTATACACTT+TGG | + | chr3_1:3298361-3298380 | None:intergenic | 35.0% | |
| ! | GCATTAAGCTAGGTAGTTTT+GGG | + | chr3_1:3298385-3298404 | None:intergenic | 35.0% |
| ! | TGCATTAAGCTAGGTAGTTT+TGG | + | chr3_1:3298386-3298405 | None:intergenic | 35.0% |
| AAAACTACCTAGCTTAATGC+AGG | - | chr3_1:3298385-3298404 | Msa0344540:intron | 35.0% | |
| ! | TTGGTGATAGTCATGGAAAT+GGG | - | chr3_1:3298504-3298523 | Msa0344540:intron | 35.0% |
| ! | GATCTTGGTTTCTCTTTTGA+TGG | + | chr3_1:3298678-3298697 | None:intergenic | 35.0% |
| TCTTCTAGTGAAGATGATGA+TGG | - | chr3_1:3298804-3298823 | Msa0344540:intron | 35.0% | |
| TGGTGAAGATTCTGATGATT+CGG | - | chr3_1:3298824-3298843 | Msa0344540:intron | 35.0% | |
| ! | AAGATTCTGATGATTCGGAA+AGG | - | chr3_1:3298829-3298848 | Msa0344540:intron | 35.0% |
| ! | GATGATGATGATATCAGTTC+AGG | - | chr3_1:3298933-3298952 | Msa0344540:CDS | 35.0% |
| !! | GCAGAAGTTGATAAGGTAAA+AGG | - | chr3_1:3299029-3299048 | Msa0344540:intron | 35.0% |
| ! | TGATTCTGTTGGAAGTGTAA+AGG | - | chr3_1:3299087-3299106 | Msa0344540:intron | 35.0% |
| ! | GATTCTGTTGGAAGTGTAAA+GGG | - | chr3_1:3299088-3299107 | Msa0344540:intron | 35.0% |
| AGGAAAAATGTCGAAAGAGT+TGG | - | chr3_1:3299150-3299169 | Msa0344540:intron | 35.0% | |
| TGAAGAATTATGTTCACTGG+TGG | - | chr3_1:3299207-3299226 | Msa0344540:intron | 35.0% | |
| !!! | TGTTTTGATCCATATCTCCT+TGG | - | chr3_1:3299354-3299373 | Msa0344540:intron | 35.0% |
| AAACATGAATACAAGCACCA+AGG | + | chr3_1:3299374-3299393 | None:intergenic | 35.0% | |
| AGCACCAGCAAAATTGTAAA+TGG | + | chr3_1:3299548-3299567 | None:intergenic | 35.0% | |
| GTGCTACAATTATTCCCTAT+AGG | - | chr3_1:3299563-3299582 | Msa0344540:intron | 35.0% | |
| GCTACAATTATTCCCTATAG+GGG | - | chr3_1:3299565-3299584 | Msa0344540:intron | 35.0% | |
| ATATATGGTACACAGCTAAC+AGG | - | chr3_1:3299661-3299680 | Msa0344540:intron | 35.0% | |
| TATATGGTACACAGCTAACA+GGG | - | chr3_1:3299662-3299681 | Msa0344540:intron | 35.0% | |
| GTTGTCATTGATGTATTGCA+TGG | - | chr3_1:3299873-3299892 | Msa0344540:intron | 35.0% | |
| AAAAGAATGCAAACAACCAC+AGG | + | chr3_1:3299950-3299969 | None:intergenic | 35.0% | |
| ! | TGAGTATTGCAAACTGGATT+GGG | + | chr3_1:3299978-3299997 | None:intergenic | 35.0% |
| ACCATTGATAGAGATGAGTA+CGG | - | chr3_1:3300222-3300241 | Msa0344540:intron | 35.0% | |
| CACATATTGCAGCAAAGTAT+GGG | + | chr3_1:3300252-3300271 | None:intergenic | 35.0% | |
| ! | GTTGAGAGTATAAAAAACGC+AGG | - | chr3_1:3300307-3300326 | Msa0344540:CDS | 35.0% |
| GATAAAAGTTAAGGCAGAGA+CGG | + | chr3_1:3300360-3300379 | None:intergenic | 35.0% | |
| !! | CACATGCACACTTTTTAACT+GGG | - | chr3_1:3301107-3301126 | Msa0344540:intron | 35.0% |
| CTACTAATGAATTTAGCCTC+TGG | - | chr3_1:3301387-3301406 | Msa0344540:CDS | 35.0% | |
| CAACGAAAAACATAGGTCAA+AGG | + | chr3_1:3301477-3301496 | None:intergenic | 35.0% | |
| ! | TGACCTATGTTTTTCGTTGA+TGG | - | chr3_1:3301478-3301497 | Msa0344540:five_prime_UTR | 35.0% |
| ATGCCATCAACGAAAAACAT+AGG | + | chr3_1:3301484-3301503 | None:intergenic | 35.0% | |
| TCATCTCATCCAACTAAGTT+TGG | + | chr3_1:3301784-3301803 | None:intergenic | 35.0% | |
| AATGATTAGCACTAGGGTTA+AGG | + | chr3_1:3301832-3301851 | None:intergenic | 35.0% | |
| GACAACAATGATTAGCACTA+GGG | + | chr3_1:3301838-3301857 | None:intergenic | 35.0% | |
| ATCATTGTTGTCGAACAAAC+TGG | - | chr3_1:3301846-3301865 | Msa0344540:five_prime_UTR | 35.0% | |
| GTTTACGGAAGCAAATAATG+AGG | - | chr3_1:3302013-3302032 | Msa0344540:intron | 35.0% | |
| ! | AAAGGTGCATTGTCTTATGT+GGG | - | chr3_1:3302036-3302055 | Msa0344540:intron | 35.0% |
| !!! | CGGGTTAGTTTTTTGGAATT+TGG | - | chr3_1:3302235-3302254 | Msa0344540:intron | 35.0% |
| ! | TTGTGAACTTAAAGGTACAC+TGG | + | chr3_1:3302719-3302738 | None:intergenic | 35.0% |
| TCTTCGCTTTCTTGTATTTG+AGG | - | chr3_1:3302744-3302763 | Msa0344540:five_prime_UTR | 35.0% | |
| CTGGCAGAAAACAAACAATA+TGG | + | chr3_1:3302882-3302901 | None:intergenic | 35.0% | |
| CTGCCAGTTATATCATCTTA+TGG | - | chr3_1:3302895-3302914 | Msa0344540:five_prime_UTR | 35.0% | |
| AAACTGTCAGTAGTGAAGAA+TGG | + | chr3_1:3303019-3303038 | None:intergenic | 35.0% | |
| !! | GGCATTGATATATCCTTGTA+GGG | + | chr3_1:3303339-3303358 | None:intergenic | 35.0% |
| !! | AGGCATTGATATATCCTTGT+AGG | + | chr3_1:3303340-3303359 | None:intergenic | 35.0% |
| GAACGAACTCAAGTTATCAT+AGG | + | chr3_1:3303360-3303379 | None:intergenic | 35.0% | |
| !! | TGAGCTGATTAAGTTGAAAG+TGG | - | chr3_1:3303475-3303494 | Msa0344540:intron | 35.0% |
| TGGATGAACATCATACTTTG+AGG | - | chr3_1:3303495-3303514 | Msa0344540:intron | 35.0% | |
| !! | TTTTGTTTCCGCATTTGAAG+TGG | + | chr3_1:3303524-3303543 | None:intergenic | 35.0% |
| TTCTTGATGCAGCTATGTTA+AGG | - | chr3_1:3303688-3303707 | Msa0344540:five_prime_UTR | 35.0% | |
| TCTTGATGCAGCTATGTTAA+GGG | - | chr3_1:3303689-3303708 | Msa0344540:five_prime_UTR | 35.0% | |
| AAAAATTGAAGAGAGAGGTG+AGG | - | chr3_1:3303750-3303769 | Msa0344540:five_prime_UTR | 35.0% | |
| CAAGAACATGCTTTCAAATC+TGG | - | chr3_1:3303908-3303927 | Msa0344540:five_prime_UTR | 35.0% | |
| AAATCTGGACAACTAGGAAA+AGG | - | chr3_1:3303923-3303942 | Msa0344540:five_prime_UTR | 35.0% | |
| AATCTGGACAACTAGGAAAA+GGG | - | chr3_1:3303924-3303943 | Msa0344540:five_prime_UTR | 35.0% | |
| GGTTAAAGAGACTAGAACAT+CGG | - | chr3_1:3304057-3304076 | Msa0344540:five_prime_UTR | 35.0% | |
| GATCCCCACATATTATTTGA+AGG | - | chr3_1:3304086-3304105 | Msa0344540:five_prime_UTR | 35.0% | |
| TTTGAAGGAGAGAAACACAA+TGG | - | chr3_1:3304101-3304120 | Msa0344540:five_prime_UTR | 35.0% | |
| TCATATTCTCAAGAACGAAC+TGG | + | chr3_1:3304150-3304169 | None:intergenic | 35.0% | |
| ATTCATCCTTCTAAACACCA+AGG | - | chr3_1:3304216-3304235 | Msa0344540:five_prime_UTR | 35.0% | |
| !! | AAACATCCTTGGTGTTTAGA+AGG | + | chr3_1:3304225-3304244 | None:intergenic | 35.0% |
| AACAGACACATAAACATCCT+TGG | + | chr3_1:3304236-3304255 | None:intergenic | 35.0% | |
| ! | TCTCTTATATTTAGGACCAC+GGG | - | chr3_1:3304373-3304392 | Msa0344540:five_prime_UTR | 35.0% |
| !!! | TTCTTGGGTTTGGTTTTGAG+CGG | + | chr3_1:3296272-3296291 | None:intergenic | 40.0% |
| CTCAAAACCAAACCCAAGAA+TGG | - | chr3_1:3296272-3296291 | Msa0344540:intron | 40.0% | |
| TCGATGATTTCGCCATTCTT+GGG | + | chr3_1:3296287-3296306 | None:intergenic | 40.0% | |
| TTCGATGATTTCGCCATTCT+TGG | + | chr3_1:3296288-3296307 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCTTCTTGC+TGG | + | chr3_1:3296337-3296356 | None:intergenic | 40.0% | |
| ACGTAGGAAGTTCGAAGTAA+TGG | - | chr3_1:3296440-3296459 | Msa0344540:three_prime_UTR | 40.0% | |
| CGTAGGAAGTTCGAAGTAAT+GGG | - | chr3_1:3296441-3296460 | Msa0344540:three_prime_UTR | 40.0% | |
| AGATACCAAAAGAATGGGGT+TGG | - | chr3_1:3296479-3296498 | Msa0344540:three_prime_UTR | 40.0% | |
| GATACCAAAAGAATGGGGTT+GGG | - | chr3_1:3296480-3296499 | Msa0344540:three_prime_UTR | 40.0% | |
| ATACCAAAAGAATGGGGTTG+GGG | - | chr3_1:3296481-3296500 | Msa0344540:three_prime_UTR | 40.0% | |
| !! | GTTCTCTTGCTATTGAGAAG+AGG | - | chr3_1:3296510-3296529 | Msa0344540:intron | 40.0% |
| !! | GATGAAGGCCTTGATGATTT+TGG | - | chr3_1:3296607-3296626 | Msa0344540:CDS | 40.0% |
| ! | AAGGAATTGATGGTCTTGGA+AGG | - | chr3_1:3296858-3296877 | Msa0344540:intron | 40.0% |
| ! | AGGAATTGATGGTCTTGGAA+GGG | - | chr3_1:3296859-3296878 | Msa0344540:intron | 40.0% |
| ! | CTTTGAAGATGAGATGCTTC+GGG | - | chr3_1:3296886-3296905 | Msa0344540:intron | 40.0% |
| CAGATATTTCAGATTTGGGC+CGG | - | chr3_1:3297201-3297220 | Msa0344540:CDS | 40.0% | |
| TTCCCTAAAGTCACAGTAAC+AGG | + | chr3_1:3297296-3297315 | None:intergenic | 40.0% | |
| CTAAACTAACCCCCTCAAAT+TGG | - | chr3_1:3297380-3297399 | Msa0344540:intron | 40.0% | |
| TCTCTTATGCCAATTTGAGG+GGG | + | chr3_1:3297392-3297411 | None:intergenic | 40.0% | |
| CTCTCTTATGCCAATTTGAG+GGG | + | chr3_1:3297393-3297412 | None:intergenic | 40.0% | |
| ACTGGTAGATTAACCCACTT+GGG | + | chr3_1:3297480-3297499 | None:intergenic | 40.0% | |
| AACTGGTAGATTAACCCACT+TGG | + | chr3_1:3297481-3297500 | None:intergenic | 40.0% | |
| !! | GCTTTGAAGCTATTTCTGAC+TGG | - | chr3_1:3297585-3297604 | Msa0344540:CDS | 40.0% |
| TTCGTTCATCACTTCCTTCT+TGG | + | chr3_1:3297636-3297655 | None:intergenic | 40.0% | |
| AGATAAGGACTTCACTTCTC+TGG | - | chr3_1:3297824-3297843 | Msa0344540:intron | 40.0% | |
| GGTACCATTATTTATCCTCG+AGG | - | chr3_1:3297986-3298005 | Msa0344540:intron | 40.0% | |
| GAACCCTCGAGGATAAATAA+TGG | + | chr3_1:3297993-3298012 | None:intergenic | 40.0% | |
| TCCAACTTTCTCTTTATGGC+AGG | - | chr3_1:3298054-3298073 | Msa0344540:intron | 40.0% | |
| TCCTGCCATAAAGAGAAAGT+TGG | + | chr3_1:3298058-3298077 | None:intergenic | 40.0% | |
| TGACCAACTTGTCAGACAAT+TGG | - | chr3_1:3298093-3298112 | Msa0344540:intron | 40.0% | |
| GACCAACTTGTCAGACAATT+GGG | - | chr3_1:3298094-3298113 | Msa0344540:intron | 40.0% | |
| ATCCCAATTGTCTGACAAGT+TGG | + | chr3_1:3298099-3298118 | None:intergenic | 40.0% | |
| CATCAATCCTGCATTAAGCT+AGG | + | chr3_1:3298395-3298414 | None:intergenic | 40.0% | |
| TATAGTGTACTAGTGAGCCT+CGG | - | chr3_1:3298436-3298455 | Msa0344540:intron | 40.0% | |
| ! | CTTGGTGATAGTCATGGAAA+TGG | - | chr3_1:3298503-3298522 | Msa0344540:intron | 40.0% |
| ! | AATTTTACTCCCATGTGCAG+CGG | + | chr3_1:3298531-3298550 | None:intergenic | 40.0% |
| TGCACATGGGAGTAAAATTG+TGG | - | chr3_1:3298532-3298551 | Msa0344540:intron | 40.0% | |
| AGTTTCTTCATCGACAGAGA+AGG | + | chr3_1:3298727-3298746 | None:intergenic | 40.0% | |
| GATTCTTGAGAGAAGAGATG+AGG | - | chr3_1:3298773-3298792 | Msa0344540:intron | 40.0% | |
| AGGTCTGAAGATTCTGATGA+AGG | - | chr3_1:3298849-3298868 | Msa0344540:intron | 40.0% | |
| AGATTCTGATGAAGGATCTG+AGG | - | chr3_1:3298857-3298876 | Msa0344540:intron | 40.0% | |
| ! | GATATCAGTTCAGGTTCAGA+AGG | - | chr3_1:3298942-3298961 | Msa0344540:CDS | 40.0% |
| GAAGATGATGATATCAGTGC+TGG | - | chr3_1:3298966-3298985 | Msa0344540:CDS | 40.0% | |
| ! | AGAAGATGAAGATGATGACG+AGG | - | chr3_1:3298992-3299011 | Msa0344540:CDS | 40.0% |
| !! | AAGAGCTGCAGAAGTTGATA+AGG | - | chr3_1:3299022-3299041 | Msa0344540:intron | 40.0% |
| ! | GGAAGTGTAAAGGGAGATAA+TGG | - | chr3_1:3299097-3299116 | Msa0344540:intron | 40.0% |
| GATACCAAGAAGATAGTCGT+TGG | - | chr3_1:3299127-3299146 | Msa0344540:intron | 40.0% | |
| ! | TTTTCTGCAGCAAGTGTGAT+CGG | + | chr3_1:3299289-3299308 | None:intergenic | 40.0% |
| ATACAAGCACCAAGGAGATA+TGG | + | chr3_1:3299366-3299385 | None:intergenic | 40.0% | |
| TTCTGGTGTAAAACAGTTGG+TGG | + | chr3_1:3299404-3299423 | None:intergenic | 40.0% | |
| CACTTCTGGTGTAAAACAGT+TGG | + | chr3_1:3299407-3299426 | None:intergenic | 40.0% | |
| ACAGTAATCAGTCCCCTATA+GGG | + | chr3_1:3299580-3299599 | None:intergenic | 40.0% | |
| AACAGTAATCAGTCCCCTAT+AGG | + | chr3_1:3299581-3299600 | None:intergenic | 40.0% | |
| ATATGGTACACAGCTAACAG+GGG | - | chr3_1:3299663-3299682 | Msa0344540:intron | 40.0% | |
| ! | CTGAGTATTGCAAACTGGAT+TGG | + | chr3_1:3299979-3299998 | None:intergenic | 40.0% |
| TCCGTACTCATCTCTATCAA+TGG | + | chr3_1:3300226-3300245 | None:intergenic | 40.0% | |
| GCACATATTGCAGCAAAGTA+TGG | + | chr3_1:3300253-3300272 | None:intergenic | 40.0% | |
| ! | AGACATAGCGTCTTTGAAGA+AGG | + | chr3_1:3300459-3300478 | None:intergenic | 40.0% |
| ATCGGAACATGGAAATACCA+TGG | + | chr3_1:3300496-3300515 | None:intergenic | 40.0% | |
| ! | GGATGTCTAAAATCGGAACA+TGG | + | chr3_1:3300507-3300526 | None:intergenic | 40.0% |
| AGTATCACAGGAGTCATAAC+TGG | + | chr3_1:3300528-3300547 | None:intergenic | 40.0% | |
| TCGCACATCAATAGTATCAC+AGG | + | chr3_1:3300540-3300559 | None:intergenic | 40.0% | |
| TATCACGGCCAGATGTTATT+GGG | + | chr3_1:3300578-3300597 | None:intergenic | 40.0% | |
| ATATCACGGCCAGATGTTAT+TGG | + | chr3_1:3300579-3300598 | None:intergenic | 40.0% | |
| AAGAACCAACGGCAATATCA+CGG | + | chr3_1:3300593-3300612 | None:intergenic | 40.0% | |
| TATAGGCCAAATATCTTCCG+CGG | - | chr3_1:3300688-3300707 | Msa0344540:intron | 40.0% | |
| CTCTCAAAACAAGGGTTCAT+AGG | + | chr3_1:3301050-3301069 | None:intergenic | 40.0% | |
| ACTCATCGCTCTCAAAACAA+GGG | + | chr3_1:3301058-3301077 | None:intergenic | 40.0% | |
| AACTCATCGCTCTCAAAACA+AGG | + | chr3_1:3301059-3301078 | None:intergenic | 40.0% | |
| !!! | TGTTTTGAGAGCGATGAGTT+TGG | - | chr3_1:3301059-3301078 | Msa0344540:intron | 40.0% |
| ! | CCAGTTAAAAAGTGTGCATG+TGG | + | chr3_1:3301109-3301128 | None:intergenic | 40.0% |
| !! | CCACATGCACACTTTTTAAC+TGG | - | chr3_1:3301106-3301125 | Msa0344540:intron | 40.0% |
| CTAACTTAAAGGACTGCAGA+TGG | - | chr3_1:3301224-3301243 | Msa0344540:intron | 40.0% | |
| AAAGGACTGCAGATGGTATT+TGG | - | chr3_1:3301231-3301250 | Msa0344540:intron | 40.0% | |
| !!! | GGAAGGATGCCACTTTTTAA+TGG | + | chr3_1:3301332-3301351 | None:intergenic | 40.0% |
| AGACGCTAACATACAAGATG+AGG | + | chr3_1:3301760-3301779 | None:intergenic | 40.0% | |
| TAGCGTCTTCCAAACTTAGT+TGG | - | chr3_1:3301772-3301791 | Msa0344540:five_prime_UTR | 40.0% | |
| AGCACTAGGGTTAAGGAATT+TGG | + | chr3_1:3301825-3301844 | None:intergenic | 40.0% | |
| CGACAACAATGATTAGCACT+AGG | + | chr3_1:3301839-3301858 | None:intergenic | 40.0% | |
| CGGAAGCAAATAATGAGGAA+AGG | - | chr3_1:3302018-3302037 | Msa0344540:intron | 40.0% | |
| ! | GAAAGGTGCATTGTCTTATG+TGG | - | chr3_1:3302035-3302054 | Msa0344540:intron | 40.0% |
| ATTCAGCTAGCAAATCAACG+AGG | + | chr3_1:3302070-3302089 | None:intergenic | 40.0% | |
| TAAGCAGAGATCAGGTAGTA+AGG | + | chr3_1:3302106-3302125 | None:intergenic | 40.0% | |
| TGCTTAACCTACGTCTCTAA+TGG | - | chr3_1:3302120-3302139 | Msa0344540:intron | 40.0% | |
| AGGCTGTGCAAGGTTTAAAT+GGG | - | chr3_1:3302190-3302209 | Msa0344540:intron | 40.0% | |
| TATCATGCAGGAACTAGCTA+AGG | + | chr3_1:3302791-3302810 | None:intergenic | 40.0% | |
| !! | TATGGTGCTGTACTTCATGA+TGG | - | chr3_1:3302825-3302844 | Msa0344540:intron | 40.0% |
| ATGATGGCACCAGAATGTTA+TGG | - | chr3_1:3302841-3302860 | Msa0344540:intron | 40.0% | |
| TCCTCATTAATGCGCAATAG+TGG | + | chr3_1:3302938-3302957 | None:intergenic | 40.0% | |
| TCTTCACTACTGACAGTTTC+AGG | - | chr3_1:3303020-3303039 | Msa0344540:intron | 40.0% | |
| TATGGATGCAGCTAATGTTG+AGG | - | chr3_1:3303198-3303217 | Msa0344540:intron | 40.0% | |
| TTAGCCAGTCAGATCAGAAA+GGG | - | chr3_1:3303631-3303650 | Msa0344540:intron | 40.0% | |
| ! | TTTTTCTTTCAGCTCGCACA+CGG | + | chr3_1:3303733-3303752 | None:intergenic | 40.0% |
| CTACTTCTTGCTTGATGTGA+AGG | - | chr3_1:3303814-3303833 | Msa0344540:intron | 40.0% | |
| AAAGCAAGAGCTGAGAAGTA+TGG | - | chr3_1:3303860-3303879 | Msa0344540:intron | 40.0% | |
| AAGCATGTTCTTGCTCTTGA+AGG | + | chr3_1:3303901-3303920 | None:intergenic | 40.0% | |
| GCTTTCAAATCTGGACAACT+AGG | - | chr3_1:3303917-3303936 | Msa0344540:five_prime_UTR | 40.0% | |
| ! | CTCTTATATTTAGGACCACG+GGG | - | chr3_1:3304374-3304393 | Msa0344540:five_prime_UTR | 40.0% |
| GATTTCGCCATTCTTGGGTT+TGG | + | chr3_1:3296282-3296301 | None:intergenic | 45.0% | |
| CTTCTTCTTCTTCTTGCTGG+TGG | + | chr3_1:3296334-3296353 | None:intergenic | 45.0% | |
| TGCTTTCATGGCTACTGCTT+CGG | + | chr3_1:3296376-3296395 | None:intergenic | 45.0% | |
| !! | GTGACCAGATTGACTCGAAT+GGG | + | chr3_1:3296422-3296441 | None:intergenic | 45.0% |
| !! | TCGAAGTAATGGGTCAGAAG+CGG | - | chr3_1:3296451-3296470 | Msa0344540:three_prime_UTR | 45.0% |
| TACCATGAGCATTATGACGC+CGG | + | chr3_1:3297223-3297242 | None:intergenic | 45.0% | |
| AGGCCTGTTACTGTGACTTT+AGG | - | chr3_1:3297290-3297309 | Msa0344540:intron | 45.0% | |
| GGCCTGTTACTGTGACTTTA+GGG | - | chr3_1:3297291-3297310 | Msa0344540:intron | 45.0% | |
| GAATCGAACCTAAGACCTTG+AGG | - | chr3_1:3297412-3297431 | Msa0344540:intron | 45.0% | |
| GTAGATTAACCCACTTGGGT+TGG | + | chr3_1:3297476-3297495 | None:intergenic | 45.0% | |
| GGAAAAAGATGAAGACCTGC+TGG | - | chr3_1:3297794-3297813 | Msa0344540:intron | 45.0% | |
| AAAGATGAAGACCTGCTGGA+AGG | - | chr3_1:3297798-3297817 | Msa0344540:intron | 45.0% | |
| CCTTATCTAATCCTTCCAGC+AGG | + | chr3_1:3297812-3297831 | None:intergenic | 45.0% | |
| CCTGCTGGAAGGATTAGATA+AGG | - | chr3_1:3297809-3297828 | Msa0344540:intron | 45.0% | |
| TGGTTCAGTCAGAGACAACA+AGG | + | chr3_1:3297862-3297881 | None:intergenic | 45.0% | |
| !! | GATGAAAGCTTTGAAGGCTC+TGG | - | chr3_1:3297887-3297906 | Msa0344540:intron | 45.0% |
| GTTGTCTTCAGCCTATCTGA+AGG | + | chr3_1:3298139-3298158 | None:intergenic | 45.0% | |
| GACAACAGAAGAGATTGCTC+AGG | - | chr3_1:3298153-3298172 | Msa0344540:intron | 45.0% | |
| AACAGAAGAGATTGCTCAGG+AGG | - | chr3_1:3298156-3298175 | Msa0344540:intron | 45.0% | |
| AAGAGAACGTCTAGAGGAGT+TGG | - | chr3_1:3298180-3298199 | Msa0344540:intron | 45.0% | |
| GCCAACAATCTTGCAAGTGA+CGG | + | chr3_1:3298467-3298486 | None:intergenic | 45.0% | |
| !! | ATTGTTGGCTTGTAACCCTG+TGG | - | chr3_1:3298478-3298497 | Msa0344540:intron | 45.0% |
| GACTATCACCAAGATCCACA+GGG | + | chr3_1:3298496-3298515 | None:intergenic | 45.0% | |
| TGACTATCACCAAGATCCAC+AGG | + | chr3_1:3298497-3298516 | None:intergenic | 45.0% | |
| ! | GTGGATCTTGGTGATAGTCA+TGG | - | chr3_1:3298497-3298516 | Msa0344540:intron | 45.0% |
| ! | ATTTTACTCCCATGTGCAGC+GGG | + | chr3_1:3298530-3298549 | None:intergenic | 45.0% |
| TTCACTCGAATCTTCAGCAG+CGG | + | chr3_1:3298631-3298650 | None:intergenic | 45.0% | |
| GAGAAACCAAGATCTCTCTC+TGG | - | chr3_1:3298684-3298703 | Msa0344540:intron | 45.0% | |
| TCATCACCAGAGAGAGATCT+TGG | + | chr3_1:3298693-3298712 | None:intergenic | 45.0% | |
| TCTTGAGAGAAGAGATGAGG+AGG | - | chr3_1:3298776-3298795 | Msa0344540:intron | 45.0% | |
| ! | GATGAAGATGATGACGAGGA+CGG | - | chr3_1:3298996-3299015 | Msa0344540:CDS | 45.0% |
| ACCAAGAAGATAGTCGTTGG+AGG | - | chr3_1:3299130-3299149 | Msa0344540:intron | 45.0% | |
| TCCTCCAACGACTATCTTCT+TGG | + | chr3_1:3299134-3299153 | None:intergenic | 45.0% | |
| ! | ACACCAGAAGTGTGATCTCT+TGG | - | chr3_1:3299415-3299434 | Msa0344540:intron | 45.0% |
| AGTCCAAGAGATCACACTTC+TGG | + | chr3_1:3299421-3299440 | None:intergenic | 45.0% | |
| ! | TACAAGTCTTGTAGGGCAGT+AGG | + | chr3_1:3299612-3299631 | None:intergenic | 45.0% |
| TATGGTACACAGCTAACAGG+GGG | - | chr3_1:3299664-3299683 | Msa0344540:intron | 45.0% | |
| CTATCACAGAAAGTAGCAGC+TGG | - | chr3_1:3300433-3300452 | Msa0344540:intron | 45.0% | |
| ATGCGTTGCCCAATAACATC+TGG | - | chr3_1:3300567-3300586 | Msa0344540:intron | 45.0% | |
| ! | AGAAAGTAACTTGCCACACG+AGG | + | chr3_1:3300646-3300665 | None:intergenic | 45.0% |
| AAAGGACCGCGGAAGATATT+TGG | + | chr3_1:3300697-3300716 | None:intergenic | 45.0% | |
| ACGTCTAACTTAAAGGACCG+CGG | + | chr3_1:3300708-3300727 | None:intergenic | 45.0% | |
| ! | TCTTAGAAAGCACAGACCAG+AGG | + | chr3_1:3301406-3301425 | None:intergenic | 45.0% |
| CGCTAACATACAAGATGAGG+AGG | + | chr3_1:3301757-3301776 | None:intergenic | 45.0% | |
| !! | TCGAACAAACTGGTGTTGCT+TGG | - | chr3_1:3301856-3301875 | Msa0344540:five_prime_UTR | 45.0% |
| ACGTAGGTTAAGCAGAGATC+AGG | + | chr3_1:3302114-3302133 | None:intergenic | 45.0% | |
| TTACTGAAAAAGGGGAGCAG+AGG | - | chr3_1:3302166-3302185 | Msa0344540:intron | 45.0% | |
| CAGGCTGTGCAAGGTTTAAA+TGG | - | chr3_1:3302189-3302208 | Msa0344540:intron | 45.0% | |
| TGGCACCAGAATGTTATGGT+TGG | - | chr3_1:3302845-3302864 | Msa0344540:intron | 45.0% | |
| GCCACTATTGCGCATTAATG+AGG | - | chr3_1:3302934-3302953 | Msa0344540:intron | 45.0% | |
| GTGAAGAATGGAGAGTCTTC+AGG | + | chr3_1:3303007-3303026 | None:intergenic | 45.0% | |
| ACCTCTGTTGAAACCCTACA+AGG | - | chr3_1:3303323-3303342 | Msa0344540:five_prime_UTR | 45.0% | |
| TCCTTGTAGGGTTTCAACAG+AGG | + | chr3_1:3303327-3303346 | None:intergenic | 45.0% | |
| CTTAGCCAGTCAGATCAGAA+AGG | - | chr3_1:3303630-3303649 | Msa0344540:intron | 45.0% | |
| AGTTCCCTTTCTGATCTGAC+TGG | + | chr3_1:3303638-3303657 | None:intergenic | 45.0% | |
| ! | CAAGAGCTGAGAAGTATGGA+AGG | - | chr3_1:3303864-3303883 | Msa0344540:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAC+TGG | + | chr3_1:3297352-3297371 | None:intergenic | 5.0% |
| !!! | GTTTGGTTTTGAGCGGCAGA+GGG | + | chr3_1:3296265-3296284 | None:intergenic | 50.0% |
| CTTCTTCTTCTTGCTGGTGG+TGG | + | chr3_1:3296331-3296350 | None:intergenic | 50.0% | |
| GCTTTCATGGCTACTGCTTC+GGG | + | chr3_1:3296375-3296394 | None:intergenic | 50.0% | |
| GCAACCCATTCGAGTCAATC+TGG | - | chr3_1:3296415-3296434 | Msa0344540:three_prime_UTR | 50.0% | |
| !! | CGTGACCAGATTGACTCGAA+TGG | + | chr3_1:3296423-3296442 | None:intergenic | 50.0% |
| TCGAGTCAATCTGGTCACGT+AGG | - | chr3_1:3296424-3296443 | Msa0344540:three_prime_UTR | 50.0% | |
| !! | GTAATGGGTCAGAAGCGGAA+AGG | - | chr3_1:3296456-3296475 | Msa0344540:three_prime_UTR | 50.0% |
| ! | CAACCCCAACCCCATTCTTT+TGG | + | chr3_1:3296487-3296506 | None:intergenic | 50.0% |
| CAAAAGAATGGGGTTGGGGT+TGG | - | chr3_1:3296485-3296504 | Msa0344540:three_prime_UTR | 50.0% | |
| CTCATGGTATGCAGAGTCCA+GGG | - | chr3_1:3297234-3297253 | Msa0344540:CDS | 50.0% | |
| TCATGGTATGCAGAGTCCAG+GGG | - | chr3_1:3297235-3297254 | Msa0344540:CDS | 50.0% | |
| CTGACGGTGGGGAAAATGTA+AGG | - | chr3_1:3297270-3297289 | Msa0344540:intron | 50.0% | |
| TCGAACCTAAGACCTTGAGG+AGG | - | chr3_1:3297415-3297434 | Msa0344540:intron | 50.0% | |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | + | chr3_1:3297456-3297475 | None:intergenic | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | + | chr3_1:3297457-3297476 | None:intergenic | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr3_1:3297462-3297481 | None:intergenic | 50.0% |
| AGTCAGAGACAACAAGGCCT+CGG | + | chr3_1:3297856-3297875 | None:intergenic | 50.0% | |
| GGAGGAAAGAGAACGTCTAG+AGG | - | chr3_1:3298174-3298193 | Msa0344540:intron | 50.0% | |
| AGAACGTCTAGAGGAGTTGG+AGG | - | chr3_1:3298183-3298202 | Msa0344540:intron | 50.0% | |
| GCCGTCACTTGCAAGATTGT+TGG | - | chr3_1:3298463-3298482 | Msa0344540:intron | 50.0% | |
| GCTTGTAACCCTGTGGATCT+TGG | - | chr3_1:3298485-3298504 | Msa0344540:intron | 50.0% | |
| ! | TCTCTCTCTGGTGATGACCT+TGG | - | chr3_1:3298696-3298715 | Msa0344540:intron | 50.0% |
| TGAGAGAAGAGATGAGGAGG+AGG | - | chr3_1:3298779-3298798 | Msa0344540:intron | 50.0% | |
| GAGAGAAGAGATGAGGAGGA+GGG | - | chr3_1:3298780-3298799 | Msa0344540:intron | 50.0% | |
| ! | ATGTAGAAAGCACGTGCCTG+TGG | - | chr3_1:3299931-3299950 | Msa0344540:intron | 50.0% |
| CGCTATGTCTCTTGCGATTG+TGG | - | chr3_1:3300469-3300488 | Msa0344540:intron | 50.0% | |
| TCTCTTGCGATTGTGGTCCA+TGG | - | chr3_1:3300476-3300495 | Msa0344540:intron | 50.0% | |
| CTCTCTGTAAGTACCTCGTG+TGG | - | chr3_1:3300630-3300649 | Msa0344540:intron | 50.0% | |
| TGAGGCGACCACTTCAAATG+CGG | - | chr3_1:3303513-3303532 | Msa0344540:intron | 50.0% | |
| AGGTGAGGCGTGAAGCTAAA+GGG | - | chr3_1:3303765-3303784 | Msa0344540:intron | 50.0% | |
| GACCACGGGGAGTAAAATGT+TGG | - | chr3_1:3304387-3304406 | Msa0344540:five_prime_UTR | 50.0% | |
| ! | TGCCAACATTTTACTCCCCG+TGG | + | chr3_1:3304392-3304411 | None:intergenic | 50.0% |
| !!! | GGTTTGGTTTTGAGCGGCAG+AGG | + | chr3_1:3296266-3296285 | None:intergenic | 55.0% |
| TCGAAACGCAGCATCGCCAA+CGG | - | chr3_1:3296303-3296322 | Msa0344540:intron | 55.0% | |
| GCTCATGGTATGCAGAGTCC+AGG | - | chr3_1:3297233-3297252 | Msa0344540:CDS | 55.0% | |
| ! | AAGCTGGTCTAGCTGACGGT+GGG | - | chr3_1:3297258-3297277 | Msa0344540:intron | 55.0% |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3_1:3297423-3297442 | None:intergenic | 55.0% | |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3_1:3297449-3297468 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | chr3_1:3297450-3297469 | None:intergenic | 55.0% |
| GGTCCCAAGCCAATACCACT+AGG | - | chr3_1:3297450-3297469 | Msa0344540:intron | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr3_1:3297463-3297482 | Msa0344540:intron | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr3_1:3297464-3297483 | Msa0344540:intron | 55.0% | |
| ! | CACTTCTCTGGCTCATTCCG+AGG | - | chr3_1:3297836-3297855 | Msa0344540:intron | 55.0% |
| TGCGTGCTCGTCCTTCAGAT+AGG | - | chr3_1:3298125-3298144 | Msa0344540:intron | 55.0% | |
| CGACAGAGAAGGAATCGCCA+AGG | + | chr3_1:3298716-3298735 | None:intergenic | 55.0% | |
| TCTGGCCGTGATATTGCCGT+TGG | - | chr3_1:3300585-3300604 | Msa0344540:intron | 55.0% | |
| TGAAAAAGGGGAGCAGAGGC+AGG | - | chr3_1:3302170-3302189 | Msa0344540:intron | 55.0% | |
| GAGGTGAGGCGTGAAGCTAA+AGG | - | chr3_1:3303764-3303783 | Msa0344540:intron | 55.0% | |
| GGTGAGGCGTGAAGCTAAAG+GGG | - | chr3_1:3303766-3303785 | Msa0344540:intron | 55.0% | |
| ! | TTTTGAGCGGCAGAGGGTGG+TGG | + | chr3_1:3296259-3296278 | None:intergenic | 60.0% |
| !!! | TGGTTTTGAGCGGCAGAGGG+TGG | + | chr3_1:3296262-3296281 | None:intergenic | 60.0% |
| !! | CTTGCTGGTGGTGGTTCCGT+TGG | + | chr3_1:3296322-3296341 | None:intergenic | 60.0% |
| GGCCGGCGTCATAATGCTCA+TGG | - | chr3_1:3297218-3297237 | Msa0344540:CDS | 60.0% | |
| ATGCAGAGTCCAGGGGAAGC+TGG | - | chr3_1:3297242-3297261 | Msa0344540:CDS | 60.0% | |
| TCAGCTAGACCAGCTTCCCC+TGG | + | chr3_1:3297254-3297273 | None:intergenic | 60.0% | |
| ! | GGGGAAGCTGGTCTAGCTGA+CGG | - | chr3_1:3297254-3297273 | Msa0344540:intron | 60.0% |
| ! | GAAGCTGGTCTAGCTGACGG+TGG | - | chr3_1:3297257-3297276 | Msa0344540:intron | 60.0% |
| ! | AGCTGGTCTAGCTGACGGTG+GGG | - | chr3_1:3297259-3297278 | Msa0344540:intron | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr3_1:3297430-3297449 | None:intergenic | 60.0% |
| ! | TTGAGGAGGAGCACACTCCC+AGG | - | chr3_1:3297429-3297448 | Msa0344540:intron | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr3_1:3297468-3297487 | None:intergenic | 60.0% |
| CAGGGCAAGAAGAACCCTCG+AGG | + | chr3_1:3298004-3298023 | None:intergenic | 60.0% | |
| TGCAAGTGACGGCATTGCCG+AGG | + | chr3_1:3298456-3298475 | None:intergenic | 60.0% | |
| GAAATGGGCCCGCTGCACAT+GGG | - | chr3_1:3298519-3298538 | Msa0344540:intron | 60.0% | |
| CTTTCAGCTCGCACACGGTC+TGG | + | chr3_1:3303728-3303747 | None:intergenic | 60.0% | |
| GAGATCGCAGCGCGAACGTC+AGG | - | chr3_1:3296642-3296661 | Msa0344540:CDS | 65.0% | |
| GGAAATGGGCCCGCTGCACA+TGG | - | chr3_1:3298518-3298537 | Msa0344540:intron | 65.0% | |
| GAGCAGAGGCAGGCTGTGCA+AGG | - | chr3_1:3302180-3302199 | Msa0344540:intron | 65.0% | |
| !! | GCGGCAGAGGGTGGTGGAGA+AGG | + | chr3_1:3296253-3296272 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 3296153 | 3304418 | 3296153 | ID=Msa0344540;Name=Msa0344540 |
| chr3_1 | mRNA | 3296153 | 3304418 | 3296153 | ID=Msa0344540-mRNA-1;Parent=Msa0344540;Name=Msa0344540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1686|1|1|1|0.64|0.66|15|292|447 |
| chr3_1 | exon | 3296153 | 3296173 | 3296153 | ID=Msa0344540-mRNA-1:exon:1046;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3296314 | 3296504 | 3296314 | ID=Msa0344540-mRNA-1:exon:1045;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3296527 | 3296871 | 3296527 | ID=Msa0344540-mRNA-1:exon:1044;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3296986 | 3297264 | 3296986 | ID=Msa0344540-mRNA-1:exon:1043;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3297530 | 3297669 | 3297530 | ID=Msa0344540-mRNA-1:exon:1042;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3298926 | 3299030 | 3298926 | ID=Msa0344540-mRNA-1:exon:1041;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3299936 | 3300129 | 3299936 | ID=Msa0344540-mRNA-1:exon:1040;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3300243 | 3300435 | 3300243 | ID=Msa0344540-mRNA-1:exon:1039;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3301247 | 3301965 | 3301247 | ID=Msa0344540-mRNA-1:exon:1038;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3302367 | 3302495 | 3302367 | ID=Msa0344540-mRNA-1:exon:1037;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3302585 | 3302797 | 3302585 | ID=Msa0344540-mRNA-1:exon:1036;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3302889 | 3302948 | 3302889 | ID=Msa0344540-mRNA-1:exon:1035;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3303285 | 3303367 | 3303285 | ID=Msa0344540-mRNA-1:exon:1034;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3303642 | 3303780 | 3303642 | ID=Msa0344540-mRNA-1:exon:1033;Parent=Msa0344540-mRNA-1 |
| chr3_1 | exon | 3303908 | 3304418 | 3303908 | ID=Msa0344540-mRNA-1:exon:1032;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3303908 | 3304418 | 3303908 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3303642 | 3303780 | 3303642 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3303285 | 3303367 | 3303285 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3302889 | 3302948 | 3302889 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3302585 | 3302797 | 3302585 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3302367 | 3302495 | 3302367 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | five_prime_UTR | 3301415 | 3301965 | 3301415 | ID=Msa0344540-mRNA-1:five_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3301247 | 3301414 | 3301247 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3300243 | 3300435 | 3300243 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3299936 | 3300129 | 3299936 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3298926 | 3299030 | 3298926 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3297530 | 3297669 | 3297530 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3296986 | 3297264 | 3296986 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | CDS | 3296607 | 3296871 | 3296607 | ID=Msa0344540-mRNA-1:cds;Parent=Msa0344540-mRNA-1 |
| chr3_1 | three_prime_UTR | 3296527 | 3296606 | 3296527 | ID=Msa0344540-mRNA-1:three_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | three_prime_UTR | 3296314 | 3296504 | 3296314 | ID=Msa0344540-mRNA-1:three_prime_utr;Parent=Msa0344540-mRNA-1 |
| chr3_1 | three_prime_UTR | 3296153 | 3296173 | 3296153 | ID=Msa0344540-mRNA-1:three_prime_utr;Parent=Msa0344540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
