AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079520 MtrunA17_Chr1g0190731 97.199 357 7 2 1 356 1 355 0.0 703
Msa0079520 MtrunA17_Chr1g0184841 79.775 178 36 0 175 352 101 278 2.30e-89 270
Msa0079520 MtrunA17_Chr4g0074161 64.130 184 52 4 167 336 173 356 1.15e-61 202
Msa0079520 MtrunA17_Chr7g0234761 64.000 75 26 1 185 258 308 382 2.02e-22 98.2
Msa0079520 MtrunA17_Chr8g0339091 64.000 75 26 1 185 258 282 356 4.54e-22 97.1
Msa0079520 MtrunA17_Chr3g0131771 48.544 103 52 1 183 284 136 238 6.30e-22 95.1
Msa0079520 MtrunA17_Chr3g0144641 69.697 66 19 1 194 258 191 256 1.94e-21 94.4
Msa0079520 MtrunA17_Chr1g0152131 68.182 66 20 1 194 258 260 325 4.05e-21 94.0
Msa0079520 MtrunA17_Chr4g0035101 68.182 66 20 1 194 258 143 208 1.37e-20 91.3
Msa0079520 MtrunA17_Chr8g0365941 68.182 66 20 1 194 258 305 370 2.02e-20 92.0
Msa0079520 MtrunA17_Chr5g0421111 68.182 66 20 1 194 258 365 430 3.55e-20 91.7
Msa0079520 MtrunA17_Chr8g0363921 65.152 66 22 1 194 258 151 216 4.08e-20 89.0
Msa0079520 MtrunA17_Chr5g0415291 60.000 75 29 1 185 258 103 177 5.12e-20 87.8
Msa0079520 MtrunA17_Chr8g0385911 65.152 66 22 1 194 258 145 210 1.63e-19 88.2
Msa0079520 MtrunA17_Chr1g0182791 51.316 76 33 1 196 271 319 390 8.03e-18 84.7
Msa0079520 MtrunA17_Chr1g0174271 50.549 91 39 3 176 260 275 365 9.79e-18 83.6
Msa0079520 MtrunA17_Chr4g0014771 59.091 66 26 1 193 257 117 182 2.58e-17 79.3
Msa0079520 MtrunA17_Chr1g0174161 39.200 125 68 4 194 312 160 282 3.80e-17 81.3
Msa0079520 MtrunA17_Chr1g0193321 52.857 70 29 1 196 265 464 529 5.01e-17 82.4
Msa0079520 MtrunA17_Chr6g0484271 41.593 113 52 4 194 300 155 259 5.39e-17 80.1
Msa0079520 MtrunA17_Chr5g0393721 58.462 65 27 0 193 257 223 287 5.62e-17 80.9
Msa0079520 MtrunA17_Chr1g0153241 46.835 79 36 1 178 256 75 147 1.06e-16 79.0
Msa0079520 MtrunA17_Chr1g0152651 56.923 65 28 0 193 257 273 337 1.06e-16 80.5
Msa0079520 MtrunA17_Chr3g0134741 46.341 82 44 0 193 274 228 309 1.39e-16 79.7
Msa0079520 MtrunA17_Chr7g0262691 50.000 70 35 0 197 266 255 324 2.07e-16 80.1
Msa0079520 MtrunA17_Chr7g0258161 60.606 66 25 1 194 258 173 238 2.74e-16 79.0
Msa0079520 MtrunA17_Chr7g0258181 50.667 75 36 1 187 260 236 310 5.40e-16 77.8
Msa0079520 MtrunA17_Chr3g0095391 53.968 63 29 0 196 258 311 373 6.48e-16 78.6
Msa0079520 MtrunA17_Chr8g0351881 52.174 69 32 1 193 260 315 383 2.99e-15 76.3
Msa0079520 MtrunA17_Chr4g0032951 53.623 69 31 1 193 260 354 422 4.77e-15 75.9
Msa0079520 MtrunA17_Chr1g0207311 45.783 83 45 0 186 268 188 270 6.45e-15 74.3
Msa0079520 MtrunA17_Chr7g0270871 51.786 56 27 0 205 260 213 268 6.61e-15 75.1
Msa0079520 MtrunA17_Chr5g0402031 59.259 54 22 0 205 258 116 169 8.50e-15 74.7
Msa0079520 MtrunA17_Chr2g0329041 54.688 64 28 1 193 255 331 394 8.77e-15 75.1
Msa0079520 MtrunA17_Chr5g0435021 57.895 57 24 0 201 257 225 281 9.34e-15 74.3
Msa0079520 MtrunA17_Chr3g0134001 46.250 80 42 1 187 266 164 242 9.84e-15 73.6
Msa0079520 MtrunA17_Chr1g0207301 48.529 68 35 0 190 257 284 351 1.61e-14 73.9
Msa0079520 MtrunA17_Chr3g0087771 47.727 88 38 3 178 257 299 386 5.02e-14 72.8
Msa0079520 MtrunA17_Chr7g0271251 51.429 70 31 1 196 265 434 500 5.19e-14 73.2
Msa0079520 MtrunA17_Chr8g0384141 50.000 70 35 0 187 256 107 176 6.59e-14 70.9
Msa0079520 MtrunA17_Chr7g0231461 49.206 63 32 0 194 256 297 359 7.43e-13 69.3
Msa0079520 MtrunA17_Chr1g0185741 32.540 126 73 1 200 325 190 303 3.37e-12 66.6
Msa0079520 MtrunA17_Chr1g0213791 50.769 65 31 1 193 256 264 328 8.36e-12 65.5
Msa0079520 MtrunA17_Chr7g0243041 49.057 53 27 0 201 253 33 85 4.27e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079520 AT4G02590.3 76.374 182 38 3 174 353 66 244 6.75e-80 244
Msa0079520 AT4G02590.2 76.374 182 38 3 174 353 129 307 2.58e-79 245
Msa0079520 AT4G02590.1 76.374 182 38 3 174 353 129 307 2.58e-79 245
Msa0079520 AT1G03040.1 47.684 367 82 12 11 353 19 299 1.30e-75 236
Msa0079520 AT1G03040.2 73.481 181 37 4 178 353 120 294 1.14e-73 230
Msa0079520 AT1G03040.3 44.388 392 89 11 11 353 19 330 1.16e-71 226
Msa0079520 AT2G24260.2 67.974 153 44 2 187 336 28 178 1.05e-61 198
Msa0079520 AT4G30980.1 60.947 169 56 2 168 336 104 262 5.21e-60 196
Msa0079520 AT2G24260.1 67.974 153 44 2 187 336 131 281 1.03e-59 196
Msa0079520 AT4G30980.2 60.947 169 56 2 168 336 152 310 1.19e-59 196
Msa0079520 AT5G58010.1 64.286 154 47 1 191 336 96 249 8.78e-59 192
Msa0079520 AT5G48560.1 51.376 109 48 2 177 284 284 388 2.78e-23 101
Msa0079520 AT5G48560.2 51.376 109 48 2 177 284 284 388 3.15e-23 100
Msa0079520 AT5G50915.3 50.980 102 39 2 186 286 128 219 1.44e-22 95.9
Msa0079520 AT5G50915.4 50.980 102 39 2 186 286 128 219 1.44e-22 95.9
Msa0079520 AT5G50915.1 50.980 102 39 2 186 286 128 219 1.86e-22 95.9
Msa0079520 AT5G50915.2 50.980 102 39 2 186 286 128 219 1.86e-22 95.9
Msa0079520 AT4G34530.1 68.182 66 20 1 194 258 172 237 5.43e-21 92.8
Msa0079520 AT3G07340.2 69.697 66 19 1 194 258 258 323 6.67e-21 93.6
Msa0079520 AT3G07340.1 69.697 66 19 1 194 258 258 323 7.30e-21 94.0
Msa0079520 AT1G68920.3 68.182 66 20 1 194 258 302 367 1.22e-20 93.2
Msa0079520 AT1G68920.1 68.182 66 20 1 194 258 303 368 1.22e-20 93.2
Msa0079520 AT1G68920.4 68.182 66 20 1 194 258 303 368 1.22e-20 93.2
Msa0079520 AT1G68920.2 68.182 66 20 1 194 258 303 368 1.22e-20 93.2
Msa0079520 AT3G23690.1 61.333 75 28 1 185 258 182 256 1.71e-20 92.0
Msa0079520 AT1G10120.2 66.667 66 21 1 194 258 206 271 4.58e-20 90.5
Msa0079520 AT1G10120.1 66.667 66 21 1 194 258 206 271 4.58e-20 90.5
Msa0079520 AT5G62610.2 57.333 75 31 1 185 258 144 218 6.78e-20 89.0
Msa0079520 AT5G62610.1 57.333 75 31 1 185 258 144 218 6.78e-20 89.0
Msa0079520 AT2G18300.1 65.152 66 22 1 194 258 185 250 8.90e-20 89.4
Msa0079520 AT2G18300.2 65.152 66 22 1 194 258 185 250 9.20e-20 89.4
Msa0079520 AT1G26260.3 63.636 66 23 1 194 258 172 237 1.04e-19 89.4
Msa0079520 AT1G26260.5 63.636 66 23 1 194 258 201 266 1.15e-19 89.7
Msa0079520 AT2G18300.3 65.152 66 22 1 194 258 185 250 1.22e-19 89.4
Msa0079520 AT4G36540.1 52.273 88 39 2 172 258 121 206 1.24e-19 88.6
Msa0079520 AT1G25330.1 42.308 130 60 4 186 314 96 211 1.26e-19 86.7
Msa0079520 AT4G36540.2 52.273 88 39 2 172 258 121 206 1.26e-19 88.6
Msa0079520 AT1G59640.1 65.152 66 22 1 194 258 136 201 1.28e-19 87.8
Msa0079520 AT1G26260.4 63.636 66 23 1 194 258 223 288 1.35e-19 89.4
Msa0079520 AT1G26260.1 63.636 66 23 1 194 258 223 288 1.35e-19 89.4
Msa0079520 AT1G26260.6 63.636 66 23 1 194 258 223 288 1.35e-19 89.4
Msa0079520 AT1G26260.2 63.636 66 23 1 194 258 223 288 1.35e-19 89.4
Msa0079520 AT2G42300.1 44.737 114 58 3 194 303 185 297 3.58e-19 87.4
Msa0079520 AT1G59640.2 65.152 66 22 1 194 258 136 201 4.40e-19 87.4
Msa0079520 AT1G73830.2 52.809 89 38 3 194 281 147 232 1.12e-18 85.1
Msa0079520 AT1G73830.1 52.809 89 38 3 194 281 147 232 1.18e-18 85.1
Msa0079520 AT3G57800.2 47.619 105 49 3 194 293 204 307 6.63e-18 84.3
Msa0079520 AT1G27740.1 45.833 96 46 1 173 268 152 241 1.26e-17 82.0
Msa0079520 AT2G20180.7 56.452 62 27 0 197 258 210 271 2.10e-17 83.2
Msa0079520 AT2G20180.1 56.452 62 27 0 197 258 210 271 2.10e-17 83.2
Msa0079520 AT2G20180.5 56.452 62 27 0 197 258 210 271 2.10e-17 83.2
Msa0079520 AT4G33880.1 48.837 86 44 0 193 278 265 350 2.51e-17 82.4
Msa0079520 AT2G20180.4 55.556 63 28 0 196 258 280 342 2.97e-17 83.2
Msa0079520 AT2G20180.6 55.556 63 28 0 196 258 280 342 2.97e-17 83.2
Msa0079520 AT2G20180.2 55.556 63 28 0 196 258 280 342 2.97e-17 83.2
Msa0079520 AT2G20180.3 55.556 63 28 0 196 258 280 342 2.97e-17 83.2
Msa0079520 AT1G18400.2 55.405 74 31 2 194 266 145 217 3.27e-17 80.5
Msa0079520 AT2G14760.1 50.000 82 41 0 193 274 236 317 4.59e-17 81.6
Msa0079520 AT1G18400.1 54.667 75 32 2 194 267 145 218 7.81e-17 79.7
Msa0079520 AT1G09530.3 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT1G09530.2 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT1G09530.5 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT1G09530.1 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT1G09530.4 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT1G09530.6 51.562 64 31 0 196 259 339 402 8.75e-17 82.0
Msa0079520 AT2G42300.4 62.121 66 24 1 194 258 185 250 1.07e-16 79.7
Msa0079520 AT2G42280.1 56.522 69 29 1 193 260 278 346 1.54e-16 80.5
Msa0079520 AT2G20180.8 56.667 60 26 0 196 255 280 339 2.61e-16 79.3
Msa0079520 AT5G43175.1 46.250 80 43 0 189 268 127 206 3.56e-16 77.0
Msa0079520 AT4G09180.1 57.576 66 27 1 193 257 183 248 4.53e-16 77.8
Msa0079520 AT1G35460.1 57.576 66 27 1 193 257 180 245 8.63e-16 76.6
Msa0079520 AT2G42280.3 59.375 64 25 1 193 255 278 341 1.19e-15 77.8
Msa0079520 AT1G51140.1 55.072 69 30 1 193 260 303 371 8.21e-15 75.5
Msa0079520 AT2G14760.3 46.067 89 35 1 193 268 236 324 9.35e-15 74.7
Msa0079520 AT4G36930.1 55.932 59 26 0 200 258 197 255 1.31e-14 74.7
Msa0079520 AT5G67110.1 42.529 87 48 1 189 275 82 166 1.80e-14 72.0
Msa0079520 AT4G00050.2 47.826 69 36 0 189 257 100 168 4.56e-14 72.4
Msa0079520 AT1G66470.1 53.226 62 29 0 203 264 204 265 7.11e-14 71.6
Msa0079520 AT5G37800.1 46.667 75 37 1 190 264 200 271 7.52e-14 72.0
Msa0079520 AT4G00050.1 47.826 69 36 0 189 257 202 270 1.04e-13 72.0
Msa0079520 AT4G28815.2 49.123 57 29 0 197 253 71 127 1.10e-13 70.1
Msa0079520 AT4G00050.3 47.826 69 36 0 189 257 202 270 1.19e-13 72.0
Msa0079520 AT3G21330.1 57.143 56 24 0 201 256 276 331 1.41e-13 71.6
Msa0079520 AT4G28790.1 45.588 68 37 0 191 258 268 335 2.49e-13 71.2
Msa0079520 AT4G28815.1 49.123 57 29 0 197 253 147 203 3.81e-13 69.7
Msa0079520 AT2G43010.2 58.333 60 25 0 197 256 254 313 9.76e-13 69.3
Msa0079520 AT2G43010.1 58.333 60 25 0 197 256 254 313 1.00e-12 69.3
Msa0079520 AT2G43010.3 58.333 60 25 0 197 256 261 320 1.06e-12 69.3
Msa0079520 AT2G43010.4 58.333 60 25 0 197 256 254 313 1.29e-12 68.9
Msa0079520 AT3G59060.3 53.968 63 29 0 196 258 252 314 1.32e-12 68.9
Msa0079520 AT3G59060.2 53.968 63 29 0 196 258 252 314 1.32e-12 68.9
Msa0079520 AT3G59060.4 53.968 63 29 0 196 258 252 314 1.32e-12 68.9
Msa0079520 AT3G59060.1 53.968 63 29 0 196 258 252 314 1.38e-12 68.9
Msa0079520 AT2G43010.5 58.333 60 25 0 197 256 296 355 1.42e-12 68.9
Msa0079520 AT5G01305.1 47.692 65 34 0 189 253 32 96 1.47e-12 65.9
Msa0079520 AT4G28800.1 40.000 80 43 1 197 271 252 331 2.08e-12 68.6
Msa0079520 AT2G43140.1 55.385 65 28 1 193 256 133 197 2.47e-12 65.9
Msa0079520 AT2G43140.2 55.385 65 28 1 193 256 230 294 2.48e-12 67.4
Msa0079520 AT4G28800.2 41.333 75 43 1 197 271 264 337 4.59e-12 67.4
Msa0079520 AT4G28790.2 45.312 64 35 0 191 254 268 331 4.97e-12 66.6
Msa0079520 AT2G46970.2 42.857 63 36 0 196 258 194 256 7.41e-12 66.6
Msa0079520 AT2G46970.3 42.857 63 36 0 196 258 203 265 8.07e-12 66.2
Msa0079520 AT2G46970.1 42.857 63 36 0 196 258 225 287 8.11e-12 66.6
Msa0079520 AT4G00120.1 46.429 56 30 0 201 256 119 174 9.06e-11 61.2

Find 133 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATGGAATAGAATTTA+TGG 0.168347 1_2:+57439193 None:intergenic
CTTAATTAGAAGATTGATTA+TGG 0.191327 1_2:+57439253 None:intergenic
TCTATTATCAAGTGTGAAAA+TGG 0.211871 1_2:+57439103 None:intergenic
ATGATGATTGTTGTTATTAT+TGG 0.222076 1_2:+57438738 None:intergenic
ACCACTTCGCCCAGGCTTGC+TGG 0.236946 1_2:+57434618 None:intergenic
AATGCCTTTAGGGTTGAATT+TGG 0.237625 1_2:-57438845 Msa0079520:CDS
TTTGTAATGTATCATGTATT+TGG 0.238037 1_2:-57433892 Msa0079520:three_prime_UTR
TTGATGGTGAAGGTGGAGTT+GGG 0.241976 1_2:+57437636 None:intergenic
TATGTGTGGTTGTTTGATTC+AGG 0.263977 1_2:+57434437 None:intergenic
TGAAGGTGGAGTTGGGGTTG+AGG 0.267425 1_2:+57437643 None:intergenic
CCAACCCCACCAGAGATATT+TGG 0.282538 1_2:+57434022 None:intergenic
CCTGAGAACGGAGTTGGATA+TGG 0.291944 1_2:-57438937 Msa0079520:CDS
GAGGAGGAATAATGCCTTTA+GGG 0.312263 1_2:-57438855 Msa0079520:CDS
TGAAAAGGAGTGAGAAATAT+TGG 0.315056 1_2:+57434352 None:intergenic
GGAGGAGGAATAATGCCTTT+AGG 0.319681 1_2:-57438856 Msa0079520:CDS
AAATGCTGCAGTATTGAAAA+AGG 0.327368 1_2:-57439078 Msa0079520:five_prime_UTR
GAAGGTGGAGTTGGGGTTGA+GGG 0.328479 1_2:+57437644 None:intergenic
TCACCATGACAATGACATAC+TGG 0.333416 1_2:+57434085 None:intergenic
ACAACAAGTTGCTAAACTTA+TGG 0.338396 1_2:-57434579 Msa0079520:CDS
TTGAGAGGAGGTGGAGGAGG+AGG 0.338901 1_2:-57438874 Msa0079520:CDS
GGAAAGTGGGGACATTTAAA+AGG 0.339902 1_2:-57433927 Msa0079520:three_prime_UTR
GTTGATGGTGAAGGTGGAGT+TGG 0.345670 1_2:+57437635 None:intergenic
GCAGTAACAGACGCTGGATT+TGG 0.346934 1_2:+57435596 None:intergenic
AGAGGAGGTGGAGGAGGAGG+AGG 0.354597 1_2:-57438871 Msa0079520:CDS
CAGACGCTGGATTTGGTTGC+TGG 0.356776 1_2:+57435603 None:intergenic
TCTTTGAGAGGAGGTGGAGG+AGG 0.361753 1_2:-57438877 Msa0079520:CDS
TTCTTCACCTTCTTCTACTC+CGG 0.363218 1_2:-57438662 Msa0079520:CDS
ATTGCTGATGCTAGAGATAT+AGG 0.364284 1_2:+57434500 None:intergenic
AGGTGGAGTTGGGGTTGAGG+GGG 0.372241 1_2:+57437646 None:intergenic
GTGGAACCAACCAGCAAGCC+TGG 0.378933 1_2:-57434628 Msa0079520:CDS
GTTCCTTAGGCTCCAAGTTA+AGG 0.387394 1_2:-57435172 Msa0079520:intron
GGTAATTGTTCAGAAGGATT+AGG 0.387856 1_2:-57438991 Msa0079520:CDS
ATCAAGCATCGCTGCTTTGT+CGG 0.394019 1_2:+57435215 None:intergenic
AAGGTGGAGTTGGGGTTGAG+GGG 0.394729 1_2:+57437645 None:intergenic
TTGATTATGTGAAGTTCCTT+AGG 0.396018 1_2:-57435185 Msa0079520:CDS
ACCACCAACCTTGTTGATGC+TGG 0.396309 1_2:+57435356 None:intergenic
GGTTCTTTGAGAGGAGGTGG+AGG 0.400561 1_2:-57438880 Msa0079520:CDS
TGAAAGAATGAAAGCATTGC+AGG 0.405094 1_2:-57435388 Msa0079520:CDS
TGCTCCAAATTCAACCCTAA+AGG 0.411905 1_2:+57438841 None:intergenic
GAAACCCTAGGACCTGAAAA+TGG 0.417764 1_2:+57439179 None:intergenic
CCAAATATCTCTGGTGGGGT+TGG 0.421701 1_2:-57434022 Msa0079520:three_prime_UTR
ATGATACCTGTTGGTGTTGA+TGG 0.423246 1_2:+57437620 None:intergenic
AATATCTCTGGTGGGGTTGG+TGG 0.425595 1_2:-57434019 Msa0079520:three_prime_UTR
GAAAATGGAATAGAATTTAT+GGG 0.428704 1_2:+57439194 None:intergenic
ATCACCTCAACTGCAGAAAC+AGG 0.434205 1_2:+57434823 None:intergenic
AAAATCATCATGGGTTTCTC+AGG 0.434914 1_2:-57438819 Msa0079520:CDS
GTGAGTGAGAAGTGTGAGAA+TGG 0.443758 1_2:+57439299 None:intergenic
CTTCGCCCAGGCTTGCTGGT+TGG 0.445620 1_2:+57434622 None:intergenic
CTGAGAACGGAGTTGGATAT+GGG 0.449903 1_2:-57438936 Msa0079520:CDS
GGTGGTTCTTTGAGAGGAGG+TGG 0.450799 1_2:-57438883 Msa0079520:CDS
GGACGGATGCCAGGTGGTTG+TGG 0.459379 1_2:+57435569 None:intergenic
TTCCTCCAAATATCTCTGGT+GGG 0.461988 1_2:-57434027 Msa0079520:three_prime_UTR
ACGGTGGATATGTCAGAATC+AGG 0.469316 1_2:+57434195 None:intergenic
CTGATAATAAGTGAAATTAG+AGG 0.473396 1_2:-57434111 Msa0079520:three_prime_UTR
TTTCCTCCAAATATCTCTGG+TGG 0.473602 1_2:-57434028 Msa0079520:three_prime_UTR
TCCTCCAAATATCTCTGGTG+GGG 0.478654 1_2:-57434026 Msa0079520:three_prime_UTR
CCATATCCAACTCCGTTCTC+AGG 0.480601 1_2:+57438937 None:intergenic
CCTTCACCATCAACACCAAC+AGG 0.485299 1_2:-57437626 Msa0079520:intron
GATAACGTTGTTGATGTTGA+AGG 0.491085 1_2:-57438769 Msa0079520:CDS
ATGAGTAGACTTGGTGGAGC+TGG 0.497941 1_2:-57434874 Msa0079520:CDS
TACCCGCTCAGCAATGCTGT+GGG 0.498183 1_2:+57435511 None:intergenic
CGCACTCGAGGACGGATGCC+AGG 0.498354 1_2:+57435560 None:intergenic
GATTGGAGCATGGGGCGTAC+AGG 0.498420 1_2:+57437673 None:intergenic
TGTTCCTGTTTCTGCAGTTG+AGG 0.500424 1_2:-57434827 Msa0079520:intron
TGAAAACATACAGTGATTCC+CGG 0.501076 1_2:+57438643 None:intergenic
AATTTGGAGCAAAATCATCA+TGG 0.505233 1_2:-57438829 Msa0079520:CDS
ATACCTTAACTTGGAGCCTA+AGG 0.506615 1_2:+57435169 None:intergenic
CAATTGGGGTCCACACCTCA+TGG 0.512972 1_2:-57438904 Msa0079520:CDS
GCAGTGCCTGAGAACGGAGT+TGG 0.513102 1_2:-57438943 Msa0079520:CDS
CACCATGACAATGACATACT+GGG 0.516631 1_2:+57434086 None:intergenic
ATCGTTCGACCACTTCGCCC+AGG 0.518825 1_2:+57434610 None:intergenic
AAATAATTAACCTTATGAAA+AGG 0.519778 1_2:+57434337 None:intergenic
TTCTTGCTCGCACTCGAGGA+CGG 0.520681 1_2:+57435552 None:intergenic
TCTGTACACATACCTTAACT+TGG 0.525136 1_2:+57435160 None:intergenic
CCACCAACCTTGTTGATGCT+GGG 0.525257 1_2:+57435357 None:intergenic
GAGAAGTGTGAGAATGGAGA+AGG 0.527335 1_2:+57439305 None:intergenic
TCTTCACCTTCTTCTACTCC+GGG 0.529181 1_2:-57438661 Msa0079520:CDS
AGGCATGATACAAAGTGCCT+TGG 0.532202 1_2:+57434520 None:intergenic
AAAAGAATCTTAGACATGGC+TGG 0.533331 1_2:-57439012 Msa0079520:exon
ATGGCTGGTAATTGTTCAGA+AGG 0.538081 1_2:-57438997 Msa0079520:CDS
AACACAGAAAGCAGGAAACA+AGG 0.538458 1_2:+57439128 None:intergenic
ATTTGGAGCAAAATCATCAT+GGG 0.540073 1_2:-57438828 Msa0079520:CDS
CCCGCTCAGCAATGCTGTGG+GGG 0.544277 1_2:+57435513 None:intergenic
GTCTTGAGCATGAGTAGACT+TGG 0.551854 1_2:-57434883 Msa0079520:CDS
GTGGGGACATTTAAAAGGAA+AGG 0.551964 1_2:-57433922 Msa0079520:three_prime_UTR
TGATGGTGAAGGTGGAGTTG+GGG 0.553141 1_2:+57437637 None:intergenic
CATGGTGGTTCTTTGAGAGG+AGG 0.554634 1_2:-57438886 Msa0079520:CDS
GGTTTCACACACACCACGTA+CGG 0.555224 1_2:-57439162 Msa0079520:five_prime_UTR
CCTCGAGTGCGAGCAAGAAG+AGG 0.556095 1_2:-57435548 Msa0079520:CDS
CCTCTTCTTGCTCGCACTCG+AGG 0.556798 1_2:+57435548 None:intergenic
TGGAACCAACCAGCAAGCCT+GGG 0.559582 1_2:-57434627 Msa0079520:CDS
TTTGTAGCTTTGCAAAATCA+CGG 0.562726 1_2:+57434249 None:intergenic
TTGAGCATGAGTAGACTTGG+TGG 0.564283 1_2:-57434880 Msa0079520:CDS
GTGATTCCCGGAGTAGAAGA+AGG 0.573165 1_2:+57438655 None:intergenic
CCTCATGGTGGTTCTTTGAG+AGG 0.573318 1_2:-57438889 Msa0079520:CDS
GGGGTTGAGATTGGAGCATG+GGG 0.575204 1_2:+57437665 None:intergenic
ACCAGCAAGCCTGGGCGAAG+TGG 0.578504 1_2:-57434619 Msa0079520:CDS
AGAGAGAAAGAGATGAGTGG+TGG 0.581534 1_2:+57439331 None:intergenic
ACTGCCATGCCACAACCACC+TGG 0.582186 1_2:-57435578 Msa0079520:CDS
AAATGGAAAACACAGAAAGC+AGG 0.582369 1_2:+57439120 None:intergenic
GATGCCAGGTGGTTGTGGCA+TGG 0.582703 1_2:+57435574 None:intergenic
ATCTTAGCAGTGCCTGAGAA+CGG 0.585394 1_2:-57438949 Msa0079520:CDS
GTTGGTGTTGATGGTGAAGG+TGG 0.585457 1_2:+57437629 None:intergenic
TTACCCGCTCAGCAATGCTG+TGG 0.587723 1_2:+57435510 None:intergenic
TATTATAGAGAAGAACAAAA+CGG 0.589619 1_2:+57439489 None:intergenic
ACCCGCTCAGCAATGCTGTG+GGG 0.594692 1_2:+57435512 None:intergenic
CCTGTTGGTGTTGATGGTGA+AGG 0.596677 1_2:+57437626 None:intergenic
ACCCCACCAGAGATATTTGG+AGG 0.604618 1_2:+57434025 None:intergenic
AGGTGAAGAAGTGATATTGT+TGG 0.604742 1_2:+57438675 None:intergenic
AAACTTATGGAAGAAGATGT+TGG 0.606417 1_2:-57434566 Msa0079520:CDS
CGTACAGGTTGAGCATGAGT+AGG 0.607775 1_2:+57437688 None:intergenic
CAAAGAACCACCATGAGGTG+TGG 0.610161 1_2:+57438894 None:intergenic
TGGGCGAAGTGGTCGAACGA+TGG 0.612445 1_2:-57434608 Msa0079520:CDS
TATGCAACTTCTTCAATCCA+AGG 0.620224 1_2:-57434537 Msa0079520:CDS
CGTGGTGTGTGTGAAACCCT+AGG 0.621190 1_2:+57439167 None:intergenic
AGCCCAGTATGTCATTGTCA+TGG 0.623507 1_2:-57434088 Msa0079520:three_prime_UTR
AGAAGAGAGAAAGAGATGAG+TGG 0.629836 1_2:+57439328 None:intergenic
ATTAGTTCCCAGCATCAACA+AGG 0.633940 1_2:-57435364 Msa0079520:intron
AGAAAATGGTGAGTGCGCTA+TGG 0.640156 1_2:+57439385 None:intergenic
GGCAGCATCAAGATGCAACA+CGG 0.647342 1_2:-57438798 Msa0079520:CDS
TGAGAACGGAGTTGGATATG+GGG 0.647846 1_2:-57438935 Msa0079520:CDS
TAGGAGTAACATTCTATGTG+TGG 0.651108 1_2:+57434423 None:intergenic
GGCATGGCAGTAACAGACGC+TGG 0.657355 1_2:+57435590 None:intergenic
ATAGGGATTCGATGCAGATG+AGG 0.663897 1_2:-57437744 Msa0079520:CDS
GAGAACGGAGTTGGATATGG+GGG 0.672184 1_2:-57438934 Msa0079520:CDS
ATCGTTGATGAGTCTGATTG+AGG 0.678473 1_2:+57434467 None:intergenic
AAAGAAAAGAATCTTAGACA+TGG 0.683086 1_2:-57439016 Msa0079520:exon
TTGGGGTCCACACCTCATGG+TGG 0.687439 1_2:-57438901 Msa0079520:CDS
AATATATGTTGGTATCACAG+TGG 0.688802 1_2:-57434296 Msa0079520:three_prime_UTR
ACTCGAGGACGGATGCCAGG+TGG 0.696377 1_2:+57435563 None:intergenic
AATTAAATCTGGTATCACGG+TGG 0.716253 1_2:+57434179 None:intergenic
CCTCTCAAAGAACCACCATG+AGG 0.722555 1_2:+57438889 None:intergenic
GTAGCTTTGCAAAATCACGG+TGG 0.732276 1_2:+57434252 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATTAAAAAATTAT+AGG + chr1_2:57436773-57436792 None:intergenic 0.0%
!!! ATAATATTTTGTCTTTATAT+AGG + chr1_2:57436020-57436039 None:intergenic 10.0%
!!! AAATTAACTAACATTTTAAA+AGG + chr1_2:57436382-57436401 None:intergenic 10.0%
!!! AGAATATTATTAGTTTTTTT+TGG + chr1_2:57436513-57436532 None:intergenic 10.0%
!! TATTTATTGTAAAATGAAAT+TGG - chr1_2:57436537-57436556 Msa0079520:intron 10.0%
!!! TTAAAAATACATTTTTTTTC+CGG - chr1_2:57437293-57437312 Msa0079520:intron 10.0%
!! ATTTGATATTACAAAAATAT+AGG - chr1_2:57437646-57437665 Msa0079520:CDS 10.0%
!! AATAAAATGTAATAGAAAAG+TGG + chr1_2:57435211-57435230 None:intergenic 15.0%
!!! TTATGTAATTTGAAGTTATA+TGG - chr1_2:57435579-57435598 Msa0079520:CDS 15.0%
!! TAGTATAATAGATAAATGAT+TGG + chr1_2:57435841-57435860 None:intergenic 15.0%
!! TATATATTATTAAGATGAGA+AGG + chr1_2:57435931-57435950 None:intergenic 15.0%
!! TTATAAAATGAATGAATGAA+CGG + chr1_2:57436131-57436150 None:intergenic 15.0%
!! AATAAAATATACATAAGCTA+AGG - chr1_2:57436155-57436174 Msa0079520:intron 15.0%
!! ATCCCAATATTTAATAATTA+AGG - chr1_2:57436178-57436197 Msa0079520:intron 15.0%
!! TCCCAATATTTAATAATTAA+GGG - chr1_2:57436179-57436198 Msa0079520:intron 15.0%
!! TCCCTTAATTATTAAATATT+GGG + chr1_2:57436183-57436202 None:intergenic 15.0%
!! ATCCCTTAATTATTAAATAT+TGG + chr1_2:57436184-57436203 None:intergenic 15.0%
!! TTATTTCAAAATGAATTTCA+AGG + chr1_2:57438272-57438291 None:intergenic 15.0%
!! TTGAAATAAAAGTAATTGAA+CGG - chr1_2:57438283-57438302 Msa0079520:intron 15.0%
!! TAAAGAATATGAAGTAAAAA+TGG + chr1_2:57438611-57438630 None:intergenic 15.0%
!! AAATAATTAACCTTATGAAA+AGG + chr1_2:57439027-57439046 None:intergenic 15.0%
!!! CCACTAAAAATAAAATATTT+TGG + chr1_2:57439375-57439394 None:intergenic 15.0%
!!! CCAAAATATTTTATTTTTAG+TGG - chr1_2:57439372-57439391 Msa0079520:five_prime_UTR 15.0%
!!! AATATTTTATTTTTAGTGGA+AGG - chr1_2:57439376-57439395 Msa0079520:five_prime_UTR 15.0%
!!! ATATTTTATTTTTAGTGGAA+GGG - chr1_2:57439377-57439396 Msa0079520:five_prime_UTR 15.0%
!! TATTATAGAGAAGAACAAAA+CGG + chr1_2:57433875-57433894 None:intergenic 20.0%
!! CTTAATTAGAAGATTGATTA+TGG + chr1_2:57434111-57434130 None:intergenic 20.0%
!! AAACAAAACAAAAACATTCT+TGG - chr1_2:57434136-57434155 Msa0079520:three_prime_UTR 20.0%
!! AACAAAACAAAAACATTCTT+GGG - chr1_2:57434137-57434156 Msa0079520:three_prime_UTR 20.0%
!! GAAAATGGAATAGAATTTAT+GGG + chr1_2:57434170-57434189 None:intergenic 20.0%
!! TGAAAATGGAATAGAATTTA+TGG + chr1_2:57434171-57434190 None:intergenic 20.0%
!!! ATAAATTCTATTCCATTTTC+AGG - chr1_2:57434170-57434189 Msa0079520:three_prime_UTR 20.0%
!!! ATGATGATTGTTGTTATTAT+TGG + chr1_2:57434626-57434645 None:intergenic 20.0%
!!! AAAGAGAGTATTGTTATTTA+TGG - chr1_2:57435554-57435573 Msa0079520:CDS 20.0%
!! ATGATAAAGATAATGTCAAA+AGG - chr1_2:57435876-57435895 Msa0079520:intron 20.0%
!! TGATAAAGATAATGTCAAAA+GGG - chr1_2:57435877-57435896 Msa0079520:intron 20.0%
!!! TTTTGTCTTTATATAGGTTT+AGG + chr1_2:57436014-57436033 None:intergenic 20.0%
!! CTTAAATATTAATCATCAAG+AGG + chr1_2:57436094-57436113 None:intergenic 20.0%
!! TGTTAATTTCAATTCTTCAA+GGG - chr1_2:57436302-57436321 Msa0079520:intron 20.0%
!!! TATTTTCATTTGCAGAATTA+CGG - chr1_2:57436328-57436347 Msa0079520:intron 20.0%
!!! TAACATTTTAAAAGGAATTG+GGG + chr1_2:57436374-57436393 None:intergenic 20.0%
!!! CTAACATTTTAAAAGGAATT+GGG + chr1_2:57436375-57436394 None:intergenic 20.0%
!!! ACTAACATTTTAAAAGGAAT+TGG + chr1_2:57436376-57436395 None:intergenic 20.0%
!!! CTAAGTTTTTTTTTTTCTGA+AGG + chr1_2:57436485-57436504 None:intergenic 20.0%
!!! CATTTGATGTCATTTATATT+TGG + chr1_2:57436722-57436741 None:intergenic 20.0%
!! AATATAAATGACATCAAATG+TGG - chr1_2:57436722-57436741 Msa0079520:intron 20.0%
!! ATATAAATGACATCAAATGT+GGG - chr1_2:57436723-57436742 Msa0079520:intron 20.0%
!! TATTGCTTAATCATAATTGT+CGG - chr1_2:57437070-57437089 Msa0079520:intron 20.0%
!! TTGAGTATTATAAGAAAGAA+TGG + chr1_2:57437564-57437583 None:intergenic 20.0%
!!! GTTTAATATTTTGAAACATG+TGG - chr1_2:57438116-57438135 Msa0079520:intron 20.0%
!! AAAAATGATTGTATTGAAAC+TGG + chr1_2:57438403-57438422 None:intergenic 20.0%
!! AACACATGAATCAAATTAAA+TGG + chr1_2:57438451-57438470 None:intergenic 20.0%
!! TTCAAATTTATAAATGGTTC+AGG + chr1_2:57438578-57438597 None:intergenic 20.0%
!!! GGCATTTTCAAATTTATAAA+TGG + chr1_2:57438584-57438603 None:intergenic 20.0%
!! AAAAATTAAATCTGGTATCA+CGG + chr1_2:57439188-57439207 None:intergenic 20.0%
!! GAGAGAAAAAAAATTAAATC+TGG + chr1_2:57439196-57439215 None:intergenic 20.0%
!! TTTGTAATGTATCATGTATT+TGG - chr1_2:57439469-57439488 Msa0079520:five_prime_UTR 20.0%
!!! CTTGTATTTCTTTAGTTTTG+CGG - chr1_2:57433910-57433929 Msa0079520:three_prime_UTR 25.0%
!!! TTGTATTTCTTTAGTTTTGC+GGG - chr1_2:57433911-57433930 Msa0079520:three_prime_UTR 25.0%
!!! TTTTTGTTGTTCTGAGAAAA+TGG + chr1_2:57433993-57434012 None:intergenic 25.0%
! TCTATTATCAAGTGTGAAAA+TGG + chr1_2:57434261-57434280 None:intergenic 25.0%
!!! ATTCTTTTCTTTTTTCAGCT+AGG + chr1_2:57434337-57434356 None:intergenic 25.0%
! AAAGAAAAGAATCTTAGACA+TGG - chr1_2:57434345-57434364 Msa0079520:three_prime_UTR 25.0%
! GTCTATATATGTGCTTTATA+GGG + chr1_2:57434773-57434792 None:intergenic 25.0%
! TGTCTATATATGTGCTTTAT+AGG + chr1_2:57434774-57434793 None:intergenic 25.0%
! GAGAAATAATTTATGAAGCA+CGG + chr1_2:57434943-57434962 None:intergenic 25.0%
! ATTAATCCTGAATCATATCT+TGG - chr1_2:57435061-57435080 Msa0079520:intron 25.0%
!! ATAACCAAAACCAAATGTTT+TGG + chr1_2:57435165-57435184 None:intergenic 25.0%
!!! TGGTTTTGGTTATTGTTATT+AGG - chr1_2:57435172-57435191 Msa0079520:intron 25.0%
! ATAGAAAATTATATCGCTCA+AGG - chr1_2:57435523-57435542 Msa0079520:CDS 25.0%
! ATATTAATGATGATACCTGT+TGG + chr1_2:57435753-57435772 None:intergenic 25.0%
! GATAAATGATTGGAAAATGA+GGG + chr1_2:57435831-57435850 None:intergenic 25.0%
! AGATAAATGATTGGAAAATG+AGG + chr1_2:57435832-57435851 None:intergenic 25.0%
!! CTTTTCTTTATGCTTTGTAA+AGG + chr1_2:57436068-57436087 None:intergenic 25.0%
! GTGTTAATTTCAATTCTTCA+AGG - chr1_2:57436301-57436320 Msa0079520:intron 25.0%
!! ATTTTCATTTGCAGAATTAC+GGG - chr1_2:57436329-57436348 Msa0079520:intron 25.0%
!!! AACATTTTAAAAGGAATTGG+GGG + chr1_2:57436373-57436392 None:intergenic 25.0%
!!! GTTTTTTTTTTTCTGAAGGA+TGG + chr1_2:57436481-57436500 None:intergenic 25.0%
! TCTATAGTAATAGACAAGTA+AGG - chr1_2:57436563-57436582 Msa0079520:intron 25.0%
! CTATAGTAATAGACAAGTAA+GGG - chr1_2:57436564-57436583 Msa0079520:intron 25.0%
!! ATTAGAAATGAGTTACCTTT+TGG + chr1_2:57436973-57436992 None:intergenic 25.0%
!!! TACAAGTAAGAGTATTGATT+TGG + chr1_2:57437196-57437215 None:intergenic 25.0%
! AAATCAATACTCTTACTTGT+AGG - chr1_2:57437195-57437214 Msa0079520:intron 25.0%
! AATCAATACTCTTACTTGTA+GGG - chr1_2:57437196-57437215 Msa0079520:intron 25.0%
!!! TGGTTAGAATTCACTTTTTA+AGG - chr1_2:57437329-57437348 Msa0079520:intron 25.0%
!!! ACTTTTTAAGGTGAATACAT+AGG - chr1_2:57437341-57437360 Msa0079520:intron 25.0%
!!! CTTTTTAAGGTGAATACATA+GGG - chr1_2:57437342-57437361 Msa0079520:intron 25.0%
! GGATGCATAGTTAAATATAA+GGG + chr1_2:57437390-57437409 None:intergenic 25.0%
! AGGATGCATAGTTAAATATA+AGG + chr1_2:57437391-57437410 None:intergenic 25.0%
! AGGACAAAAATAACTACTAA+AGG - chr1_2:57437436-57437455 Msa0079520:intron 25.0%
! AAAGAATGGAACACATTATA+CGG + chr1_2:57437550-57437569 None:intergenic 25.0%
! TTTAAATTGCAGTTACGTTA+TGG - chr1_2:57437616-57437635 Msa0079520:intron 25.0%
! TGATCATACTATAACAACAT+TGG + chr1_2:57438034-57438053 None:intergenic 25.0%
!! ATAGTATGATCAATTTTCTC+TGG - chr1_2:57438042-57438061 Msa0079520:intron 25.0%
! ATATGAAGTAAAAATGGAAG+TGG + chr1_2:57438605-57438624 None:intergenic 25.0%
!!! CATTTTTTTTGTTAGCTACT+AGG + chr1_2:57438960-57438979 None:intergenic 25.0%
! CTGATAATAAGTGAAATTAG+AGG - chr1_2:57439250-57439269 Msa0079520:five_prime_UTR 25.0%
! TTGGAGGAAAAAATTCAATA+GGG + chr1_2:57439323-57439342 None:intergenic 25.0%
! TTTGGAGGAAAAAATTCAAT+AGG + chr1_2:57439324-57439343 None:intergenic 25.0%
! AAATGCTGCAGTATTGAAAA+AGG - chr1_2:57434283-57434302 Msa0079520:three_prime_UTR 30.0%
!!! AGGTTATTAGTTTTGTGTAG+TGG + chr1_2:57434317-57434336 None:intergenic 30.0%
! AATTTGGAGCAAAATCATCA+TGG - chr1_2:57434532-57434551 Msa0079520:CDS 30.0%
! ATTTGGAGCAAAATCATCAT+GGG - chr1_2:57434533-57434552 Msa0079520:CDS 30.0%
AGAAGTTATGCCAAAACATT+TGG - chr1_2:57435152-57435171 Msa0079520:intron 30.0%
!! TATGCCAAAACATTTGGTTT+TGG - chr1_2:57435158-57435177 Msa0079520:intron 30.0%
GTCTAGCACAAATTATTGAA+TGG - chr1_2:57435441-57435460 Msa0079520:intron 30.0%
! TGTGTGAATGTTTAAAACGA+TGG - chr1_2:57435473-57435492 Msa0079520:intron 30.0%
! ATATAGGTTTAGGTTTGAGT+GGG + chr1_2:57436004-57436023 None:intergenic 30.0%
! TATATAGGTTTAGGTTTGAG+TGG + chr1_2:57436005-57436024 None:intergenic 30.0%
TAATACTGATATTTCACTCG+AGG + chr1_2:57436244-57436263 None:intergenic 30.0%
TCGAGTGAAATATCAGTATT+AGG - chr1_2:57436243-57436262 Msa0079520:intron 30.0%
TCATTAATCACACACTAAAG+TGG + chr1_2:57436852-57436871 None:intergenic 30.0%
TAAAACAAAAGAAAACGCGT+TGG + chr1_2:57436899-57436918 None:intergenic 30.0%
AGTAATTGTCCTAGAGTAAT+AGG - chr1_2:57436940-57436959 Msa0079520:intron 30.0%
AAATAAATGATGGTCCCATT+CGG + chr1_2:57437005-57437024 None:intergenic 30.0%
! GGACCATCATTTATTTGTTA+GGG - chr1_2:57437009-57437028 Msa0079520:intron 30.0%
AAGCCCTAACAAATAAATGA+TGG + chr1_2:57437015-57437034 None:intergenic 30.0%
TTGACAAGAACTTTAAATGG+AGG + chr1_2:57437104-57437123 None:intergenic 30.0%
! TCCATTTAAAGTTCTTGTCA+AGG - chr1_2:57437103-57437122 Msa0079520:intron 30.0%
TCCTTGACAAGAACTTTAAA+TGG + chr1_2:57437107-57437126 None:intergenic 30.0%
!!! CGTTGATGTATCTTTTTTTC+CGG - chr1_2:57437163-57437182 Msa0079520:intron 30.0%
!!! GTTGATGTATCTTTTTTTCC+GGG - chr1_2:57437164-57437183 Msa0079520:intron 30.0%
!!! TTGATGTATCTTTTTTTCCG+GGG - chr1_2:57437165-57437184 Msa0079520:intron 30.0%
TAACCATTAAGCTATTTGAC+CGG + chr1_2:57437315-57437334 None:intergenic 30.0%
TTGATTATGTGAAGTTCCTT+AGG - chr1_2:57438176-57438195 Msa0079520:intron 30.0%
GAGTCAAATGAAAATCAAGA+AGG + chr1_2:57438228-57438247 None:intergenic 30.0%
TTTGATTCATGTGTTGAAAC+AGG - chr1_2:57438456-57438475 Msa0079520:intron 30.0%
ACAACAAGTTGCTAAACTTA+TGG - chr1_2:57438782-57438801 Msa0079520:CDS 30.0%
AAACTTATGGAAGAAGATGT+TGG - chr1_2:57438795-57438814 Msa0079520:CDS 30.0%
TGAAAAGGAGTGAGAAATAT+TGG + chr1_2:57439012-57439031 None:intergenic 30.0%
! ATTTCTCACTCCTTTTCATA+AGG - chr1_2:57439014-57439033 Msa0079520:exon 30.0%
AATATATGTTGGTATCACAG+TGG - chr1_2:57439065-57439084 Msa0079520:five_prime_UTR 30.0%
! TTTGTAGCTTTGCAAAATCA+CGG + chr1_2:57439115-57439134 None:intergenic 30.0%
!!! TTTTTTCCTCCAAATATCTC+TGG - chr1_2:57439330-57439349 Msa0079520:five_prime_UTR 30.0%
!!! CTTTTTGTTTTTTGAGTCAG+TGG - chr1_2:57439413-57439432 Msa0079520:five_prime_UTR 30.0%
!!! TATTCCATTTTCAGGTCCTA+GGG - chr1_2:57434178-57434197 Msa0079520:three_prime_UTR 35.0%
AAATGGAAAACACAGAAAGC+AGG + chr1_2:57434244-57434263 None:intergenic 35.0%
AAAAGAATCTTAGACATGGC+TGG - chr1_2:57434349-57434368 Msa0079520:three_prime_UTR 35.0%
GGTAATTGTTCAGAAGGATT+AGG - chr1_2:57434370-57434389 Msa0079520:three_prime_UTR 35.0%
!! AATGCCTTTAGGGTTGAATT+TGG - chr1_2:57434516-57434535 Msa0079520:CDS 35.0%
AAAATCATCATGGGTTTCTC+AGG - chr1_2:57434542-57434561 Msa0079520:CDS 35.0%
GATAACGTTGTTGATGTTGA+AGG - chr1_2:57434592-57434611 Msa0079520:CDS 35.0%
AGGTGAAGAAGTGATATTGT+TGG + chr1_2:57434689-57434708 None:intergenic 35.0%
TGAAAACATACAGTGATTCC+CGG + chr1_2:57434721-57434740 None:intergenic 35.0%
CTCAAATTACTAGCTATGTC+AGG + chr1_2:57434827-57434846 None:intergenic 35.0%
AATCCTGAATCATATCTTGG+AGG - chr1_2:57435064-57435083 Msa0079520:intron 35.0%
TAACCTCCAAGATATGATTC+AGG + chr1_2:57435070-57435089 None:intergenic 35.0%
ATTAGTTAATAGTGCTCCGT+GGG - chr1_2:57435094-57435113 Msa0079520:intron 35.0%
GTCCAAGATCTTACTTAGTT+AGG - chr1_2:57435497-57435516 Msa0079520:intron 35.0%
TGCCTAACTAAGTAAGATCT+TGG + chr1_2:57435502-57435521 None:intergenic 35.0%
! TTATATGGTTTGTCTCTTGC+AGG - chr1_2:57435594-57435613 Msa0079520:CDS 35.0%
!! AGGAGTTTGTTTTCAACGTT+TGG - chr1_2:57435637-57435656 Msa0079520:intron 35.0%
TTGGAAAATGAGGGACAATA+TGG + chr1_2:57435822-57435841 None:intergenic 35.0%
GAGCTACTAATACTCTTCTT+TGG + chr1_2:57435907-57435926 None:intergenic 35.0%
ATATTTAAGCGCTTCATCCA+TGG - chr1_2:57436105-57436124 Msa0079520:intron 35.0%
TCACTCGAGGAAAAAGAAAA+AGG + chr1_2:57436231-57436250 None:intergenic 35.0%
GGGACCATCATTTATTTGTT+AGG - chr1_2:57437008-57437027 Msa0079520:intron 35.0%
!! GTATTGATTTGGTAAAACCC+CGG + chr1_2:57437185-57437204 None:intergenic 35.0%
TTTCCGGTCAAATAGCTTAA+TGG - chr1_2:57437309-57437328 Msa0079520:intron 35.0%
CATGCAAACTGAGTTATACT+CGG - chr1_2:57437412-57437431 Msa0079520:intron 35.0%
ATGCAAACTGAGTTATACTC+GGG - chr1_2:57437413-57437432 Msa0079520:intron 35.0%
TTGATCAAGATTCGTATGCA+TGG - chr1_2:57437477-57437496 Msa0079520:intron 35.0%
! AAGTGCTGCAATATTGCAAT+GGG + chr1_2:57437732-57437751 None:intergenic 35.0%
!! AAAGTGCTGCAATATTGCAA+TGG + chr1_2:57437733-57437752 None:intergenic 35.0%
!! TGAAAGAATGAAAGCATTGC+AGG - chr1_2:57437973-57437992 Msa0079520:intron 35.0%
TCTGTACACATACCTTAACT+TGG + chr1_2:57438204-57438223 None:intergenic 35.0%
GGCATGTAAAAGAATTAAGC+AGG + chr1_2:57438430-57438449 None:intergenic 35.0%
TATGCAACTTCTTCAATCCA+AGG - chr1_2:57438824-57438843 Msa0079520:CDS 35.0%
TATGTGTGGTTGTTTGATTC+AGG + chr1_2:57438927-57438946 None:intergenic 35.0%
TAGGAGTAACATTCTATGTG+TGG + chr1_2:57438941-57438960 None:intergenic 35.0%
AATTAAATCTGGTATCACGG+TGG + chr1_2:57439185-57439204 None:intergenic 35.0%
!!! CTCTAGAGTTTTGTCAAACT+AGG - chr1_2:57439213-57439232 Msa0079520:five_prime_UTR 35.0%
!!! TTTTTTGAGTCAGTGGAAAG+TGG - chr1_2:57439420-57439439 Msa0079520:five_prime_UTR 35.0%
!!! TTTTTGAGTCAGTGGAAAGT+GGG - chr1_2:57439421-57439440 Msa0079520:five_prime_UTR 35.0%
AGAAGAGAGAAAGAGATGAG+TGG + chr1_2:57434036-57434055 None:intergenic 40.0%
!!! CTATTCCATTTTCAGGTCCT+AGG - chr1_2:57434177-57434196 Msa0079520:three_prime_UTR 40.0%
AACACAGAAAGCAGGAAACA+AGG + chr1_2:57434236-57434255 None:intergenic 40.0%
ATGGCTGGTAATTGTTCAGA+AGG - chr1_2:57434364-57434383 Msa0079520:three_prime_UTR 40.0%
GAGGAGGAATAATGCCTTTA+GGG - chr1_2:57434506-57434525 Msa0079520:CDS 40.0%
TGCTCCAAATTCAACCCTAA+AGG + chr1_2:57434523-57434542 None:intergenic 40.0%
TTCTTCACCTTCTTCTACTC+CGG - chr1_2:57434699-57434718 Msa0079520:intron 40.0%
! GATTAGTTAATAGTGCTCCG+TGG - chr1_2:57435093-57435112 Msa0079520:intron 40.0%
!! ATGATACCTGTTGGTGTTGA+TGG + chr1_2:57435744-57435763 None:intergenic 40.0%
!! GTTTAGGTTTGAGTGGGTTA+CGG + chr1_2:57435998-57436017 None:intergenic 40.0%
AATGAATGAATGAACGGCCA+TGG + chr1_2:57436125-57436144 None:intergenic 40.0%
! TCCTTTAGCCTTTCTACTTG+CGG - chr1_2:57436267-57436286 Msa0079520:intron 40.0%
GTCCTAGAGTAATAGGCATT+TGG - chr1_2:57436947-57436966 Msa0079520:intron 40.0%
GTAATAGGCATTTGGCCAAA+AGG - chr1_2:57436955-57436974 Msa0079520:intron 40.0%
GTATAACTCAGTTTGCATGG+AGG + chr1_2:57437411-57437430 None:intergenic 40.0%
CGAGTATAACTCAGTTTGCA+TGG + chr1_2:57437414-57437433 None:intergenic 40.0%
AGATTCGTATGCATGGAAGT+AGG - chr1_2:57437484-57437503 Msa0079520:intron 40.0%
! AACACATTATACGGCTAGCT+AGG + chr1_2:57437541-57437560 None:intergenic 40.0%
ATTAGTTCCCAGCATCAACA+AGG - chr1_2:57437997-57438016 Msa0079520:intron 40.0%
! ATACCTTAACTTGGAGCCTA+AGG + chr1_2:57438195-57438214 None:intergenic 40.0%
AACTCTATGATCTGTGTGCA+GGG - chr1_2:57438696-57438715 Msa0079520:CDS 40.0%
! ATCGTTGATGAGTCTGATTG+AGG + chr1_2:57438897-57438916 None:intergenic 40.0%
CACCATGACAATGACATACT+GGG + chr1_2:57439278-57439297 None:intergenic 40.0%
TCACCATGACAATGACATAC+TGG + chr1_2:57439279-57439298 None:intergenic 40.0%
TTTCCTCCAAATATCTCTGG+TGG - chr1_2:57439333-57439352 Msa0079520:five_prime_UTR 40.0%
TTCCTCCAAATATCTCTGGT+GGG - chr1_2:57439334-57439353 Msa0079520:five_prime_UTR 40.0%
!! TTTTGAGTCAGTGGAAAGTG+GGG - chr1_2:57439422-57439441 Msa0079520:five_prime_UTR 40.0%
GGAAAGTGGGGACATTTAAA+AGG - chr1_2:57439434-57439453 Msa0079520:five_prime_UTR 40.0%
GTGGGGACATTTAAAAGGAA+AGG - chr1_2:57439439-57439458 Msa0079520:five_prime_UTR 40.0%
AGAAAATGGTGAGTGCGCTA+TGG + chr1_2:57433979-57433998 None:intergenic 45.0%
AGAGAGAAAGAGATGAGTGG+TGG + chr1_2:57434033-57434052 None:intergenic 45.0%
! GAGAAGTGTGAGAATGGAGA+AGG + chr1_2:57434059-57434078 None:intergenic 45.0%
! GTGAGTGAGAAGTGTGAGAA+TGG + chr1_2:57434065-57434084 None:intergenic 45.0%
GAAACCCTAGGACCTGAAAA+TGG + chr1_2:57434185-57434204 None:intergenic 45.0%
ATCTTAGCAGTGCCTGAGAA+CGG - chr1_2:57434412-57434431 Msa0079520:three_prime_UTR 45.0%
CTGAGAACGGAGTTGGATAT+GGG - chr1_2:57434425-57434444 Msa0079520:exon 45.0%
TGAGAACGGAGTTGGATATG+GGG - chr1_2:57434426-57434445 Msa0079520:exon 45.0%
!! ATATGGGGGAGTGTTGCAAT+TGG - chr1_2:57434441-57434460 Msa0079520:CDS 45.0%
!! TATGGGGGAGTGTTGCAATT+GGG - chr1_2:57434442-57434461 Msa0079520:CDS 45.0%
GGAGGAGGAATAATGCCTTT+AGG - chr1_2:57434505-57434524 Msa0079520:CDS 45.0%
TCTTCACCTTCTTCTACTCC+GGG - chr1_2:57434700-57434719 Msa0079520:intron 45.0%
GCATATACTCTGACATCCCA+CGG + chr1_2:57435113-57435132 None:intergenic 45.0%
! TGGTTTGTCTCTTGCAGGAT+AGG - chr1_2:57435599-57435618 Msa0079520:CDS 45.0%
GGTTTGTCTCTTGCAGGATA+GGG - chr1_2:57435600-57435619 Msa0079520:CDS 45.0%
ATAGGGATTCGATGCAGATG+AGG - chr1_2:57435617-57435636 Msa0079520:CDS 45.0%
!! TTGATGGTGAAGGTGGAGTT+GGG + chr1_2:57435728-57435747 None:intergenic 45.0%
TCCGCAAGTAGAAAGGCTAA+AGG + chr1_2:57436271-57436290 None:intergenic 45.0%
GGCCAAATGCCTATTACTCT+AGG + chr1_2:57436952-57436971 None:intergenic 45.0%
TCTAATAGCCTCGTACCGAA+TGG - chr1_2:57436987-57437006 Msa0079520:intron 45.0%
CTAATAGCCTCGTACCGAAT+GGG - chr1_2:57436988-57437007 Msa0079520:intron 45.0%
! GTGAATACATAGGGTGTCTG+AGG - chr1_2:57437351-57437370 Msa0079520:intron 45.0%
CAAACTGAGTTATACTCGGG+AGG - chr1_2:57437416-57437435 Msa0079520:intron 45.0%
! ATCAAGCATCGCTGCTTTGT+CGG + chr1_2:57438149-57438168 None:intergenic 45.0%
GTTCCTTAGGCTCCAAGTTA+AGG - chr1_2:57438189-57438208 Msa0079520:intron 45.0%
GTCTTGAGCATGAGTAGACT+TGG - chr1_2:57438478-57438497 Msa0079520:intron 45.0%
TTGAGCATGAGTAGACTTGG+TGG - chr1_2:57438481-57438500 Msa0079520:intron 45.0%
!! TGTTCCTGTTTCTGCAGTTG+AGG - chr1_2:57438534-57438553 Msa0079520:intron 45.0%
ATCACCTCAACTGCAGAAAC+AGG + chr1_2:57438541-57438560 None:intergenic 45.0%
CAACTCTATGATCTGTGTGC+AGG - chr1_2:57438695-57438714 Msa0079520:CDS 45.0%
ACTCTATGATCTGTGTGCAG+GGG - chr1_2:57438697-57438716 Msa0079520:CDS 45.0%
! GTAGCTTTGCAAAATCACGG+TGG + chr1_2:57439112-57439131 None:intergenic 45.0%
ACGGTGGATATGTCAGAATC+AGG + chr1_2:57439169-57439188 None:intergenic 45.0%
AGCCCAGTATGTCATTGTCA+TGG - chr1_2:57439273-57439292 Msa0079520:five_prime_UTR 45.0%
TCCTCCAAATATCTCTGGTG+GGG - chr1_2:57439335-57439354 Msa0079520:five_prime_UTR 45.0%
!! ATTTATATAAAATATATATC+TGG - chr1_2:57435376-57435395 Msa0079520:CDS 5.0%
!! TGATTAATATAATTATATAT+AGG + chr1_2:57438077-57438096 None:intergenic 5.0%
!!! ATTTTAATTTTAATATATGT+TGG - chr1_2:57439054-57439073 Msa0079520:five_prime_UTR 5.0%
GGTTTCACACACACCACGTA+CGG - chr1_2:57434199-57434218 Msa0079520:three_prime_UTR 50.0%
! GGAGAGATGTTTTCCGTACG+TGG + chr1_2:57434215-57434234 None:intergenic 50.0%
CCATATCCAACTCCGTTCTC+AGG + chr1_2:57434427-57434446 None:intergenic 50.0%
CCTGAGAACGGAGTTGGATA+TGG - chr1_2:57434424-57434443 Msa0079520:exon 50.0%
GAGAACGGAGTTGGATATGG+GGG - chr1_2:57434427-57434446 Msa0079520:exon 50.0%
!! ATGGGGGAGTGTTGCAATTG+GGG - chr1_2:57434443-57434462 Msa0079520:CDS 50.0%
CAAAGAACCACCATGAGGTG+TGG + chr1_2:57434470-57434489 None:intergenic 50.0%
CCTCTCAAAGAACCACCATG+AGG + chr1_2:57434475-57434494 None:intergenic 50.0%
CCTCATGGTGGTTCTTTGAG+AGG - chr1_2:57434472-57434491 Msa0079520:CDS 50.0%
! CATGGTGGTTCTTTGAGAGG+AGG - chr1_2:57434475-57434494 Msa0079520:CDS 50.0%
GGCAGCATCAAGATGCAACA+CGG - chr1_2:57434563-57434582 Msa0079520:CDS 50.0%
GTGATTCCCGGAGTAGAAGA+AGG + chr1_2:57434709-57434728 None:intergenic 50.0%
! CGTACAGGTTGAGCATGAGT+AGG + chr1_2:57435676-57435695 None:intergenic 50.0%
! TGATGGTGAAGGTGGAGTTG+GGG + chr1_2:57435727-57435746 None:intergenic 50.0%
!! GTTGATGGTGAAGGTGGAGT+TGG + chr1_2:57435729-57435748 None:intergenic 50.0%
!! GTTGGTGTTGATGGTGAAGG+TGG + chr1_2:57435735-57435754 None:intergenic 50.0%
!! CCTGTTGGTGTTGATGGTGA+AGG + chr1_2:57435738-57435757 None:intergenic 50.0%
CCTTCACCATCAACACCAAC+AGG - chr1_2:57435735-57435754 Msa0079520:intron 50.0%
GGAAGTGGCTCATTGGTGTA+TGG + chr1_2:57435973-57435992 None:intergenic 50.0%
!! AGGTTTGAGTGGGTTACGGA+CGG + chr1_2:57435994-57436013 None:intergenic 50.0%
ATTTGCAGAATTACGGGCCG+TGG - chr1_2:57436335-57436354 Msa0079520:intron 50.0%
GGGGGAGTAACAATGTACCA+CGG + chr1_2:57436355-57436374 None:intergenic 50.0%
GCAGTAACAGACGCTGGATT+TGG + chr1_2:57437768-57437787 None:intergenic 50.0%
GTTCCCAGCATCAACAAGGT+TGG - chr1_2:57438001-57438020 Msa0079520:intron 50.0%
CCACCAACCTTGTTGATGCT+GGG + chr1_2:57438007-57438026 None:intergenic 50.0%
ACCACCAACCTTGTTGATGC+TGG + chr1_2:57438008-57438027 None:intergenic 50.0%
!! ATGAGTAGACTTGGTGGAGC+TGG - chr1_2:57438487-57438506 Msa0079520:intron 50.0%
CTCTATGATCTGTGTGCAGG+GGG - chr1_2:57438698-57438717 Msa0079520:CDS 50.0%
ACCCCACCAGAGATATTTGG+AGG + chr1_2:57439339-57439358 None:intergenic 50.0%
CCAACCCCACCAGAGATATT+TGG + chr1_2:57439342-57439361 None:intergenic 50.0%
CCAAATATCTCTGGTGGGGT+TGG - chr1_2:57439339-57439358 Msa0079520:five_prime_UTR 50.0%
AATATCTCTGGTGGGGTTGG+TGG - chr1_2:57439342-57439361 Msa0079520:five_prime_UTR 50.0%
CGTGGTGTGTGTGAAACCCT+AGG + chr1_2:57434197-57434216 None:intergenic 55.0%
CAATTGGGGTCCACACCTCA+TGG - chr1_2:57434457-57434476 Msa0079520:CDS 55.0%
! GGTGGTTCTTTGAGAGGAGG+TGG - chr1_2:57434478-57434497 Msa0079520:CDS 55.0%
! GGTTCTTTGAGAGGAGGTGG+AGG - chr1_2:57434481-57434500 Msa0079520:CDS 55.0%
! TCTTTGAGAGGAGGTGGAGG+AGG - chr1_2:57434484-57434503 Msa0079520:CDS 55.0%
GGGGTTGAGATTGGAGCATG+GGG + chr1_2:57435699-57435718 None:intergenic 55.0%
GGGGGTTGAGATTGGAGCAT+GGG + chr1_2:57435700-57435719 None:intergenic 55.0%
AGGGGGTTGAGATTGGAGCA+TGG + chr1_2:57435701-57435720 None:intergenic 55.0%
AAGGTGGAGTTGGGGTTGAG+GGG + chr1_2:57435719-57435738 None:intergenic 55.0%
GAAGGTGGAGTTGGGGTTGA+GGG + chr1_2:57435720-57435739 None:intergenic 55.0%
TGAAGGTGGAGTTGGGGTTG+AGG + chr1_2:57435721-57435740 None:intergenic 55.0%
TACGGACGGAAGTGGCTCAT+TGG + chr1_2:57435980-57435999 None:intergenic 55.0%
GAGCGCATCCGCAAGTAGAA+AGG + chr1_2:57436278-57436297 None:intergenic 55.0%
TGATGGTCCCATTCGGTACG+AGG + chr1_2:57436998-57437017 None:intergenic 55.0%
! CAGACGCTGGATTTGGTTGC+TGG + chr1_2:57437761-57437780 None:intergenic 55.0%
TTCTTGCTCGCACTCGAGGA+CGG + chr1_2:57437812-57437831 None:intergenic 55.0%
TACCCGCTCAGCAATGCTGT+GGG + chr1_2:57437853-57437872 None:intergenic 55.0%
TTACCCGCTCAGCAATGCTG+TGG + chr1_2:57437854-57437873 None:intergenic 55.0%
CCCAGCATCAACAAGGTTGG+TGG - chr1_2:57438004-57438023 Msa0079520:intron 55.0%
TATGATCTGTGTGCAGGGGG+AGG - chr1_2:57438701-57438720 Msa0079520:CDS 55.0%
TGGAACCAACCAGCAAGCCT+GGG - chr1_2:57438734-57438753 Msa0079520:CDS 55.0%
GCAGTGCCTGAGAACGGAGT+TGG - chr1_2:57434418-57434437 Msa0079520:exon 60.0%
TTGGGGTCCACACCTCATGG+TGG - chr1_2:57434460-57434479 Msa0079520:CDS 60.0%
TTGAGAGGAGGTGGAGGAGG+AGG - chr1_2:57434487-57434506 Msa0079520:CDS 60.0%
GATTGGAGCATGGGGCGTAC+AGG + chr1_2:57435691-57435710 None:intergenic 60.0%
GGGGTTGAGGGGGTTGAGAT+TGG + chr1_2:57435708-57435727 None:intergenic 60.0%
AGGTGGAGTTGGGGTTGAGG+GGG + chr1_2:57435718-57435737 None:intergenic 60.0%
!! GAGTGGGTTACGGACGGAAG+TGG + chr1_2:57435988-57436007 None:intergenic 60.0%
GGCATGGCAGTAACAGACGC+TGG + chr1_2:57437774-57437793 None:intergenic 60.0%
ACTGCCATGCCACAACCACC+TGG - chr1_2:57437783-57437802 Msa0079520:intron 60.0%
GATGCCAGGTGGTTGTGGCA+TGG + chr1_2:57437790-57437809 None:intergenic 60.0%
CCTCTTCTTGCTCGCACTCG+AGG + chr1_2:57437816-57437835 None:intergenic 60.0%
CCTCGAGTGCGAGCAAGAAG+AGG - chr1_2:57437813-57437832 Msa0079520:intron 60.0%
AGCAATGCTGTGGGGGTCTG+TGG + chr1_2:57437844-57437863 None:intergenic 60.0%
ACCCCCACAGCATTGCTGAG+CGG - chr1_2:57437847-57437866 Msa0079520:intron 60.0%
ACCCGCTCAGCAATGCTGTG+GGG + chr1_2:57437852-57437871 None:intergenic 60.0%
GTGCAGGGGGAGGACATAGA+AGG - chr1_2:57438711-57438730 Msa0079520:CDS 60.0%
CAGGGGGAGGACATAGAAGG+TGG - chr1_2:57438714-57438733 Msa0079520:CDS 60.0%
GTGGAACCAACCAGCAAGCC+TGG - chr1_2:57438733-57438752 Msa0079520:CDS 60.0%
ATCGTTCGACCACTTCGCCC+AGG + chr1_2:57438754-57438773 None:intergenic 60.0%
TGGGCGAAGTGGTCGAACGA+TGG - chr1_2:57438753-57438772 Msa0079520:CDS 60.0%
AGAGGAGGTGGAGGAGGAGG+AGG - chr1_2:57434490-57434509 Msa0079520:CDS 65.0%
GGACGGATGCCAGGTGGTTG+TGG + chr1_2:57437795-57437814 None:intergenic 65.0%
ACTCGAGGACGGATGCCAGG+TGG + chr1_2:57437801-57437820 None:intergenic 65.0%
TGCTGTGGGGGTCTGTGGCT+TGG + chr1_2:57437839-57437858 None:intergenic 65.0%
CCCGCTCAGCAATGCTGTGG+GGG + chr1_2:57437851-57437870 None:intergenic 65.0%
CCCCCACAGCATTGCTGAGC+GGG - chr1_2:57437848-57437867 Msa0079520:intron 65.0%
!! CTTCGCCCAGGCTTGCTGGT+TGG + chr1_2:57438742-57438761 None:intergenic 65.0%
ACCAGCAAGCCTGGGCGAAG+TGG - chr1_2:57438742-57438761 Msa0079520:CDS 65.0%
ACCACTTCGCCCAGGCTTGC+TGG + chr1_2:57438746-57438765 None:intergenic 65.0%
CGCACTCGAGGACGGATGCC+AGG + chr1_2:57437804-57437823 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 57433862 57439521 57433862 ID=Msa0079520;Name=Msa0079520
chr1_2 mRNA 57433862 57439521 57433862 ID=Msa0079520-mRNA-1;Parent=Msa0079520;Name=Msa0079520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=502|1|1|1|1|1|7|574|356
chr1_2 exon 57433862 57434666 57433862 ID=Msa0079520-mRNA-1:exon:18177;Parent=Msa0079520-mRNA-1
chr1_2 exon 57434828 57434905 57434828 ID=Msa0079520-mRNA-1:exon:18176;Parent=Msa0079520-mRNA-1
chr1_2 exon 57435173 57435238 57435173 ID=Msa0079520-mRNA-1:exon:18175;Parent=Msa0079520-mRNA-1
chr1_2 exon 57435365 57435430 57435365 ID=Msa0079520-mRNA-1:exon:18174;Parent=Msa0079520-mRNA-1
chr1_2 exon 57435514 57435636 57435514 ID=Msa0079520-mRNA-1:exon:18173;Parent=Msa0079520-mRNA-1
chr1_2 exon 57437627 57437767 57437627 ID=Msa0079520-mRNA-1:exon:18172;Parent=Msa0079520-mRNA-1
chr1_2 exon 57438654 57439521 57438654 ID=Msa0079520-mRNA-1:exon:18171;Parent=Msa0079520-mRNA-1
chr1_2 five_prime_UTR 57439020 57439521 57439020 ID=Msa0079520-mRNA-1:five_prime_utr;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57438654 57439019 57438654 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57437627 57437767 57437627 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57435514 57435636 57435514 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57435365 57435430 57435365 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57435173 57435238 57435173 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57434828 57434905 57434828 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 CDS 57434436 57434666 57434436 ID=Msa0079520-mRNA-1:cds;Parent=Msa0079520-mRNA-1
chr1_2 three_prime_UTR 57433862 57434435 57433862 ID=Msa0079520-mRNA-1:three_prime_utr;Parent=Msa0079520-mRNA-1
Gene Sequence

>Msa0079520

ATGGCTGGTAATTGTTCAGAAGGATTAGGTGATGATTTCTTTGAGCAGATCTTAGCAGTGCCTGAGAACGGAGTTGGATATGGGGGAGTGTTGCAATTGGGGTCCACACCTCATGGTGGTTCTTTGAGAGGAGGTGGAGGAGGAGGAGGAATAATGCCTTTAGGGTTGAATTTGGAGCAAAATCATCATGGGTTTCTCAGGCAGCATCAAGATGCAACACGGTTTGTTGATAACGTTGTTGATGTTGAAGGAAATATTACCAATAATAACAACAATCATCATCATCTTCGTCTACATGACATCAATAATCATAACAACAACACCAACAATATCACTTCTTCACCTTCTTCTACTCCGGGAATCACTGATAGGGATTCGATGCAGATGAGGAGTTTGTTTTCAACGTTTGGACAATTGCATACTCCTACTCATGCTCAACCTGTACGCCCCATGCTCCAATCTCAACCCCCTCAACCCCAACTCCACCTTCACCATCAACACCAACAGCACTTTCAGAGCCAGCAACCAAATCCAGCGTCTGTTACTGCCATGCCACAACCACCTGGCATCCGTCCTCGAGTGCGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGCATTGCTGAGCGGCTGCGTCGTGAAAGAATCGCTGAAAGAATGAAAGCATTGCAGGAATTAGTTCCCAGCATCAACAAGACCGACAAAGCAGCGATGCTTGATGAGATTGTTGATTATGTGAAGTTCCTTAGGCTCCAAGTTAAGGTCTTGAGCATGAGTAGACTTGGTGGAGCTGGTGCAGTTGCTCAGCTTGTAGCTGATGTTCCTGTTTCTGCAGTTGAGGGGGAGGACATAGAAGGTGGAACCAACCAGCAAGCCTGGGCGAAGTGGTCGAACGATGGAACAGAACAACAAGTTGCTAAACTTATGGAAGAAGATGTTGGTGCAGCTATGCAACTTCTTCAATCCAAGGCACTTTGTATCATGCCTATATCTCTAGCATCAGCAATTTTTCGTATGCCTCAATCAGACTCATCAACGATCATCAAGCCTGAATCAAACAACCACACATAG
Protein sequence

>Msa0079520

MAGNCSEGLGDDFFEQILAVPENGVGYGGVLQLGSTPHGGSLRGGGGGGGIMPLGLNLEQNHHGFLRQHQDATRFVDNVVDVEGNITNNNNNHHHLRLHDINNHNNNTNNITSSPSSTPGITDRDSMQMRSLFSTFGQLHTPTHAQPVRPMLQSQPPQPQLHLHHQHQQHFQSQQPNPASVTAMPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDKAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPVSAVEGEDIEGGTNQQAWAKWSNDGTEQQVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRMPQSDSSTIIKPESNNHT*