AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032340 MtrunA17_Chr1g0190731 96.919 357 8 2 1 356 1 355 0.0 702
Msa0032340 MtrunA17_Chr1g0184841 79.775 178 36 0 175 352 101 278 1.74e-89 270
Msa0032340 MtrunA17_Chr4g0074161 64.130 184 52 4 167 336 173 356 1.35e-61 202
Msa0032340 MtrunA17_Chr7g0234761 64.000 75 26 1 185 258 308 382 2.08e-22 98.2
Msa0032340 MtrunA17_Chr8g0339091 64.000 75 26 1 185 258 282 356 4.54e-22 97.1
Msa0032340 MtrunA17_Chr3g0131771 48.544 103 52 1 183 284 136 238 5.60e-22 95.1
Msa0032340 MtrunA17_Chr3g0144641 69.697 66 19 1 194 258 191 256 1.87e-21 94.7
Msa0032340 MtrunA17_Chr1g0152131 68.182 66 20 1 194 258 260 325 3.90e-21 94.0
Msa0032340 MtrunA17_Chr4g0035101 68.182 66 20 1 194 258 143 208 1.35e-20 91.3
Msa0032340 MtrunA17_Chr8g0365941 68.182 66 20 1 194 258 305 370 2.03e-20 92.0
Msa0032340 MtrunA17_Chr5g0421111 68.182 66 20 1 194 258 365 430 3.27e-20 92.0
Msa0032340 MtrunA17_Chr8g0363921 65.152 66 22 1 194 258 151 216 3.81e-20 89.0
Msa0032340 MtrunA17_Chr5g0415291 60.000 75 29 1 185 258 103 177 5.17e-20 87.8
Msa0032340 MtrunA17_Chr8g0385911 65.152 66 22 1 194 258 145 210 1.55e-19 88.2
Msa0032340 MtrunA17_Chr1g0182791 51.316 76 33 1 196 271 319 390 7.67e-18 84.7
Msa0032340 MtrunA17_Chr1g0174271 50.549 91 39 3 176 260 275 365 9.25e-18 83.6
Msa0032340 MtrunA17_Chr4g0014771 59.091 66 26 1 193 257 117 182 2.61e-17 79.3
Msa0032340 MtrunA17_Chr1g0174161 39.200 125 68 4 194 312 160 282 3.55e-17 81.3
Msa0032340 MtrunA17_Chr1g0193321 52.857 70 29 1 196 265 464 529 4.96e-17 82.4
Msa0032340 MtrunA17_Chr6g0484271 41.593 113 52 4 194 300 155 259 5.23e-17 80.1
Msa0032340 MtrunA17_Chr5g0393721 58.462 65 27 0 193 257 223 287 5.36e-17 80.9
Msa0032340 MtrunA17_Chr1g0152651 56.923 65 28 0 193 257 273 337 1.05e-16 80.5
Msa0032340 MtrunA17_Chr1g0153241 46.835 79 36 1 178 256 75 147 1.11e-16 79.0
Msa0032340 MtrunA17_Chr3g0134741 46.341 82 44 0 193 274 228 309 1.39e-16 79.7
Msa0032340 MtrunA17_Chr7g0262691 50.000 70 35 0 197 266 255 324 1.94e-16 80.1
Msa0032340 MtrunA17_Chr7g0258161 60.606 66 25 1 194 258 173 238 2.69e-16 79.0
Msa0032340 MtrunA17_Chr7g0258181 50.667 75 36 1 187 260 236 310 5.67e-16 77.8
Msa0032340 MtrunA17_Chr3g0095391 53.968 63 29 0 196 258 311 373 6.78e-16 78.6
Msa0032340 MtrunA17_Chr8g0351881 52.174 69 32 1 193 260 315 383 2.99e-15 76.3
Msa0032340 MtrunA17_Chr4g0032951 53.623 69 31 1 193 260 354 422 4.43e-15 75.9
Msa0032340 MtrunA17_Chr7g0270871 51.786 56 27 0 205 260 213 268 6.55e-15 75.1
Msa0032340 MtrunA17_Chr1g0207311 45.783 83 45 0 186 268 188 270 6.90e-15 74.3
Msa0032340 MtrunA17_Chr5g0435021 57.895 57 24 0 201 257 225 281 8.50e-15 74.3
Msa0032340 MtrunA17_Chr5g0402031 59.259 54 22 0 205 258 116 169 8.83e-15 74.7
Msa0032340 MtrunA17_Chr2g0329041 54.688 64 28 1 193 255 331 394 8.94e-15 75.1
Msa0032340 MtrunA17_Chr3g0134001 46.250 80 42 1 187 266 164 242 9.84e-15 73.6
Msa0032340 MtrunA17_Chr1g0207301 48.529 68 35 0 190 257 284 351 1.52e-14 74.3
Msa0032340 MtrunA17_Chr7g0271251 51.429 70 31 1 196 265 434 500 5.00e-14 73.2
Msa0032340 MtrunA17_Chr3g0087771 47.727 88 38 3 178 257 299 386 5.02e-14 72.8
Msa0032340 MtrunA17_Chr8g0384141 50.000 70 35 0 187 256 107 176 6.65e-14 70.9
Msa0032340 MtrunA17_Chr7g0231461 49.206 63 32 0 194 256 297 359 7.17e-13 69.3
Msa0032340 MtrunA17_Chr1g0185741 32.540 126 73 1 200 325 190 303 3.44e-12 66.6
Msa0032340 MtrunA17_Chr1g0213791 50.769 65 31 1 193 256 264 328 7.91e-12 65.9
Msa0032340 MtrunA17_Chr7g0243041 49.057 53 27 0 201 253 33 85 4.48e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032340 AT4G02590.3 76.374 182 38 3 174 353 66 244 6.97e-80 244
Msa0032340 AT4G02590.2 76.374 182 38 3 174 353 129 307 2.61e-79 245
Msa0032340 AT4G02590.1 76.374 182 38 3 174 353 129 307 2.61e-79 245
Msa0032340 AT1G03040.1 47.684 367 82 12 11 353 19 299 1.18e-75 236
Msa0032340 AT1G03040.2 73.481 181 37 4 178 353 120 294 1.06e-73 231
Msa0032340 AT1G03040.3 44.388 392 89 11 11 353 19 330 8.49e-72 227
Msa0032340 AT2G24260.2 67.974 153 44 2 187 336 28 178 1.11e-61 198
Msa0032340 AT4G30980.1 60.947 169 56 2 168 336 104 262 5.67e-60 196
Msa0032340 AT2G24260.1 67.974 153 44 2 187 336 131 281 9.80e-60 196
Msa0032340 AT4G30980.2 60.947 169 56 2 168 336 152 310 1.15e-59 196
Msa0032340 AT5G58010.1 64.286 154 47 1 191 336 96 249 1.03e-58 192
Msa0032340 AT5G48560.1 51.376 109 48 2 177 284 284 388 2.68e-23 101
Msa0032340 AT5G48560.2 51.376 109 48 2 177 284 284 388 3.21e-23 100
Msa0032340 AT5G50915.3 50.980 102 39 2 186 286 128 219 1.32e-22 96.3
Msa0032340 AT5G50915.4 50.980 102 39 2 186 286 128 219 1.32e-22 96.3
Msa0032340 AT5G50915.1 50.980 102 39 2 186 286 128 219 1.76e-22 96.3
Msa0032340 AT5G50915.2 50.980 102 39 2 186 286 128 219 1.76e-22 96.3
Msa0032340 AT4G34530.1 68.182 66 20 1 194 258 172 237 5.76e-21 92.8
Msa0032340 AT3G07340.1 69.697 66 19 1 194 258 258 323 6.34e-21 94.0
Msa0032340 AT3G07340.2 69.697 66 19 1 194 258 258 323 6.93e-21 93.6
Msa0032340 AT1G68920.3 68.182 66 20 1 194 258 302 367 1.13e-20 93.6
Msa0032340 AT1G68920.1 68.182 66 20 1 194 258 303 368 1.17e-20 93.2
Msa0032340 AT1G68920.4 68.182 66 20 1 194 258 303 368 1.17e-20 93.2
Msa0032340 AT1G68920.2 68.182 66 20 1 194 258 303 368 1.17e-20 93.2
Msa0032340 AT3G23690.1 61.333 75 28 1 185 258 182 256 1.61e-20 92.0
Msa0032340 AT1G10120.2 66.667 66 21 1 194 258 206 271 4.32e-20 90.9
Msa0032340 AT1G10120.1 66.667 66 21 1 194 258 206 271 4.32e-20 90.9
Msa0032340 AT5G62610.2 57.333 75 31 1 185 258 144 218 6.98e-20 89.0
Msa0032340 AT5G62610.1 57.333 75 31 1 185 258 144 218 6.98e-20 89.0
Msa0032340 AT2G18300.2 65.152 66 22 1 194 258 185 250 9.02e-20 89.4
Msa0032340 AT2G18300.1 65.152 66 22 1 194 258 185 250 9.35e-20 89.4
Msa0032340 AT1G26260.3 63.636 66 23 1 194 258 172 237 1.03e-19 89.4
Msa0032340 AT1G26260.5 63.636 66 23 1 194 258 201 266 1.09e-19 89.7
Msa0032340 AT1G25330.1 42.308 130 60 4 186 314 96 211 1.16e-19 87.0
Msa0032340 AT1G59640.1 65.152 66 22 1 194 258 136 201 1.19e-19 87.8
Msa0032340 AT4G36540.1 52.273 88 39 2 172 258 121 206 1.23e-19 88.6
Msa0032340 AT2G18300.3 65.152 66 22 1 194 258 185 250 1.25e-19 89.4
Msa0032340 AT4G36540.2 52.273 88 39 2 172 258 121 206 1.26e-19 88.6
Msa0032340 AT1G26260.4 63.636 66 23 1 194 258 223 288 1.38e-19 89.4
Msa0032340 AT1G26260.1 63.636 66 23 1 194 258 223 288 1.38e-19 89.4
Msa0032340 AT1G26260.6 63.636 66 23 1 194 258 223 288 1.38e-19 89.4
Msa0032340 AT1G26260.2 63.636 66 23 1 194 258 223 288 1.38e-19 89.4
Msa0032340 AT2G42300.1 44.737 114 58 3 194 303 185 297 3.48e-19 87.4
Msa0032340 AT1G59640.2 65.152 66 22 1 194 258 136 201 4.32e-19 87.4
Msa0032340 AT1G73830.2 52.809 89 38 3 194 281 147 232 1.15e-18 85.1
Msa0032340 AT1G73830.1 52.809 89 38 3 194 281 147 232 1.15e-18 85.1
Msa0032340 AT3G57800.2 47.619 105 49 3 194 293 204 307 6.44e-18 84.7
Msa0032340 AT1G27740.1 45.833 96 46 1 173 268 152 241 1.21e-17 82.0
Msa0032340 AT2G20180.7 56.452 62 27 0 197 258 210 271 2.06e-17 83.2
Msa0032340 AT2G20180.1 56.452 62 27 0 197 258 210 271 2.06e-17 83.2
Msa0032340 AT2G20180.5 56.452 62 27 0 197 258 210 271 2.06e-17 83.2
Msa0032340 AT4G33880.1 48.837 86 44 0 193 278 265 350 2.51e-17 82.4
Msa0032340 AT2G20180.4 55.556 63 28 0 196 258 280 342 3.05e-17 83.2
Msa0032340 AT2G20180.6 55.556 63 28 0 196 258 280 342 3.05e-17 83.2
Msa0032340 AT2G20180.2 55.556 63 28 0 196 258 280 342 3.05e-17 83.2
Msa0032340 AT2G20180.3 55.556 63 28 0 196 258 280 342 3.05e-17 83.2
Msa0032340 AT1G18400.2 55.405 74 31 2 194 266 145 217 3.46e-17 80.5
Msa0032340 AT2G14760.1 50.000 82 41 0 193 274 236 317 4.54e-17 81.6
Msa0032340 AT1G18400.1 54.667 75 32 2 194 267 145 218 7.29e-17 79.7
Msa0032340 AT1G09530.3 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT1G09530.2 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT1G09530.5 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT1G09530.1 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT1G09530.4 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT1G09530.6 51.562 64 31 0 196 259 339 402 8.67e-17 82.0
Msa0032340 AT2G42300.4 62.121 66 24 1 194 258 185 250 1.11e-16 79.7
Msa0032340 AT2G42280.1 56.522 69 29 1 193 260 278 346 1.56e-16 80.1
Msa0032340 AT2G20180.8 56.667 60 26 0 196 255 280 339 2.61e-16 79.3
Msa0032340 AT5G43175.1 46.250 80 43 0 189 268 127 206 3.59e-16 77.0
Msa0032340 AT4G09180.1 57.576 66 27 1 193 257 183 248 4.40e-16 77.8
Msa0032340 AT1G35460.1 57.576 66 27 1 193 257 180 245 8.22e-16 77.0
Msa0032340 AT2G42280.3 59.375 64 25 1 193 255 278 341 1.11e-15 77.8
Msa0032340 AT1G51140.1 55.072 69 30 1 193 260 303 371 8.21e-15 75.5
Msa0032340 AT2G14760.3 44.211 95 40 1 193 274 236 330 8.59e-15 75.1
Msa0032340 AT4G36930.1 55.932 59 26 0 200 258 197 255 1.32e-14 74.7
Msa0032340 AT5G67110.1 42.529 87 48 1 189 275 82 166 1.90e-14 72.0
Msa0032340 AT4G00050.2 47.826 69 36 0 189 257 100 168 4.47e-14 72.4
Msa0032340 AT1G66470.1 53.226 62 29 0 203 264 204 265 6.84e-14 72.0
Msa0032340 AT5G37800.1 53.226 62 29 0 203 264 210 271 7.45e-14 72.0
Msa0032340 AT4G00050.1 47.826 69 36 0 189 257 202 270 1.02e-13 72.0
Msa0032340 AT4G28815.2 49.123 57 29 0 197 253 71 127 1.13e-13 70.1
Msa0032340 AT4G00050.3 47.826 69 36 0 189 257 202 270 1.17e-13 72.0
Msa0032340 AT3G21330.1 57.143 56 24 0 201 256 276 331 1.48e-13 71.6
Msa0032340 AT4G28790.1 45.588 68 37 0 191 258 268 335 2.47e-13 71.2
Msa0032340 AT4G28815.1 49.123 57 29 0 197 253 147 203 3.84e-13 69.7
Msa0032340 AT2G43010.1 58.333 60 25 0 197 256 254 313 1.00e-12 69.3
Msa0032340 AT2G43010.2 58.333 60 25 0 197 256 254 313 1.00e-12 69.3
Msa0032340 AT2G43010.3 58.333 60 25 0 197 256 261 320 1.10e-12 69.3
Msa0032340 AT2G43010.4 58.333 60 25 0 197 256 254 313 1.29e-12 68.9
Msa0032340 AT3G59060.3 53.968 63 29 0 196 258 252 314 1.36e-12 68.9
Msa0032340 AT3G59060.2 53.968 63 29 0 196 258 252 314 1.36e-12 68.9
Msa0032340 AT3G59060.4 53.968 63 29 0 196 258 252 314 1.36e-12 68.9
Msa0032340 AT3G59060.1 53.968 63 29 0 196 258 252 314 1.39e-12 68.9
Msa0032340 AT5G01305.1 47.692 65 34 0 189 253 32 96 1.48e-12 65.9
Msa0032340 AT2G43010.5 58.333 60 25 0 197 256 296 355 1.49e-12 68.9
Msa0032340 AT4G28800.1 40.000 80 43 1 197 271 252 331 2.12e-12 68.6
Msa0032340 AT2G43140.1 55.385 65 28 1 193 256 133 197 2.47e-12 65.9
Msa0032340 AT2G43140.2 55.385 65 28 1 193 256 230 294 2.50e-12 67.4
Msa0032340 AT4G28800.2 41.333 75 43 1 197 271 264 337 4.50e-12 67.4
Msa0032340 AT4G28790.2 45.312 64 35 0 191 254 268 331 4.97e-12 66.6
Msa0032340 AT2G46970.2 42.857 63 36 0 196 258 194 256 7.34e-12 66.6
Msa0032340 AT2G46970.3 42.857 63 36 0 196 258 203 265 7.51e-12 66.6
Msa0032340 AT2G46970.1 42.857 63 36 0 196 258 225 287 8.18e-12 66.6
Msa0032340 AT4G00120.1 46.429 56 30 0 201 256 119 174 9.33e-11 61.2

Find 132 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATGGAATAGAATTTA+TGG 0.168347 1_1:+59404014 None:intergenic
CTTAATTAGAAGATTGATTA+TGG 0.191327 1_1:+59404074 None:intergenic
ATGATGATTGTTGTTATTAT+TGG 0.222076 1_1:+59403551 None:intergenic
ACCACTTCGCCCAGGCTTGC+TGG 0.236946 1_1:+59399435 None:intergenic
AATGCCTTTAGGGTTGAATT+TGG 0.237625 1_1:-59403658 Msa0032340:CDS
TTTGTAATGTATCATGTATT+TGG 0.238037 1_1:-59398710 Msa0032340:three_prime_UTR
TTGATGGTGAAGGTGGAGTT+GGG 0.241976 1_1:+59402455 None:intergenic
TATGTGTGGTTGTTTGATTC+AGG 0.263977 1_1:+59399254 None:intergenic
TGAAGGTGGAGTTGGGGTTG+AGG 0.267425 1_1:+59402462 None:intergenic
CCAACCCCACCAGAGATATT+TGG 0.282538 1_1:+59398840 None:intergenic
CCTGAGAACGGAGTTGGATA+TGG 0.291944 1_1:-59403750 Msa0032340:CDS
GAGGAGGAATAATGCCTTTA+GGG 0.312263 1_1:-59403668 Msa0032340:CDS
TGAAAAGGAGTGAGAAATAT+TGG 0.315056 1_1:+59399169 None:intergenic
GGAGGAGGAATAATGCCTTT+AGG 0.319681 1_1:-59403669 Msa0032340:CDS
AAATGCTGCAGTATTGAAAA+AGG 0.327368 1_1:-59403899 Msa0032340:five_prime_UTR
GAAGGTGGAGTTGGGGTTGA+GGG 0.328479 1_1:+59402463 None:intergenic
TCACCATGACAATGACATAC+TGG 0.333416 1_1:+59398903 None:intergenic
ACAACAAGTTGCTAAACTTA+TGG 0.338396 1_1:-59399396 Msa0032340:CDS
TTGAGAGGAGGTGGAGGAGG+AGG 0.338901 1_1:-59403687 Msa0032340:CDS
GGAAAGTGGGGACATTTAAA+AGG 0.339902 1_1:-59398745 Msa0032340:three_prime_UTR
GTTGATGGTGAAGGTGGAGT+TGG 0.345670 1_1:+59402454 None:intergenic
GCAGTAACAGACGCTGGATT+TGG 0.346934 1_1:+59400413 None:intergenic
AGAGGAGGTGGAGGAGGAGG+AGG 0.354597 1_1:-59403684 Msa0032340:CDS
CAGACGCTGGATTTGGTTGC+TGG 0.356776 1_1:+59400420 None:intergenic
TCTTTGAGAGGAGGTGGAGG+AGG 0.361753 1_1:-59403690 Msa0032340:CDS
TTCTTCACCTTCTTCTACTC+CGG 0.363218 1_1:-59403475 Msa0032340:CDS
ATTGCTGATGCTAGAGATAT+AGG 0.364284 1_1:+59399317 None:intergenic
AGGTGGAGTTGGGGTTGAGG+GGG 0.372241 1_1:+59402465 None:intergenic
GTGGAACCAACCAGCAAGCC+TGG 0.378933 1_1:-59399445 Msa0032340:CDS
GTTCCTTAGGCTCCAAGTTA+AGG 0.387394 1_1:-59399989 Msa0032340:intron
GGTAATTGTTCAGAAGGATT+AGG 0.387856 1_1:-59403804 Msa0032340:CDS
ATCAAGCATCGCTGCTTTGT+CGG 0.394019 1_1:+59400032 None:intergenic
AAGGTGGAGTTGGGGTTGAG+GGG 0.394729 1_1:+59402464 None:intergenic
TTGATTATGTGAAGTTCCTT+AGG 0.396018 1_1:-59400002 Msa0032340:CDS
ACCACCAACCTTGTTGATGC+TGG 0.396309 1_1:+59400173 None:intergenic
GGTTCTTTGAGAGGAGGTGG+AGG 0.400561 1_1:-59403693 Msa0032340:CDS
TGAAAGAATGAAAGCATTGC+AGG 0.405094 1_1:-59400205 Msa0032340:CDS
TGCTCCAAATTCAACCCTAA+AGG 0.411905 1_1:+59403654 None:intergenic
GAAACCCTAGGACCTGAAAA+TGG 0.417764 1_1:+59404000 None:intergenic
CCAAATATCTCTGGTGGGGT+TGG 0.421701 1_1:-59398840 Msa0032340:three_prime_UTR
ATGATACCTGTTGGTGTTGA+TGG 0.423246 1_1:+59402439 None:intergenic
AATATCTCTGGTGGGGTTGG+TGG 0.425595 1_1:-59398837 Msa0032340:three_prime_UTR
GAAAATGGAATAGAATTTAT+GGG 0.428704 1_1:+59404015 None:intergenic
ATCACCTCAACTGCAGAAAC+AGG 0.434205 1_1:+59399640 None:intergenic
AAAATCATCATGGGTTTCTC+AGG 0.434914 1_1:-59403632 Msa0032340:CDS
GTGAGTGAGAAGTGTGAGAA+TGG 0.443758 1_1:+59404120 None:intergenic
CTGAGAACGGAGTTGGATAT+GGG 0.445264 1_1:-59403749 Msa0032340:CDS
CTTCGCCCAGGCTTGCTGGT+TGG 0.445620 1_1:+59399439 None:intergenic
GGTGGTTCTTTGAGAGGAGG+TGG 0.450799 1_1:-59403696 Msa0032340:CDS
GGACGGATGCCAGGTGGTTG+TGG 0.459379 1_1:+59400386 None:intergenic
TTCCTCCAAATATCTCTGGT+GGG 0.461988 1_1:-59398845 Msa0032340:three_prime_UTR
ATTACCAGCCATGTCTAAGA+TGG 0.466047 1_1:+59403821 None:intergenic
CCATATCCAACTCCGTTCTC+AGG 0.466773 1_1:+59403750 None:intergenic
ACGGTGGATATGTCAGAATC+AGG 0.469316 1_1:+59399012 None:intergenic
CTGATAATAAGTGAAATTAG+AGG 0.473396 1_1:-59398929 Msa0032340:three_prime_UTR
TTTCCTCCAAATATCTCTGG+TGG 0.473602 1_1:-59398846 Msa0032340:three_prime_UTR
TCCTCCAAATATCTCTGGTG+GGG 0.478654 1_1:-59398844 Msa0032340:three_prime_UTR
CCTTCACCATCAACACCAAC+AGG 0.485299 1_1:-59402445 Msa0032340:intron
GATAACGTTGTTGATGTTGA+AGG 0.491085 1_1:-59403582 Msa0032340:CDS
ATGAGTAGACTTGGTGGAGC+TGG 0.497941 1_1:-59399691 Msa0032340:CDS
TACCCGCTCAGCAATGCTGT+GGG 0.498183 1_1:+59400328 None:intergenic
CGCACTCGAGGACGGATGCC+AGG 0.498354 1_1:+59400377 None:intergenic
GATTGGAGCATGGGGCGTAC+AGG 0.498420 1_1:+59402492 None:intergenic
TGTTCCTGTTTCTGCAGTTG+AGG 0.500424 1_1:-59399644 Msa0032340:intron
TGAAAACATACAGTGATTCC+CGG 0.501076 1_1:+59403456 None:intergenic
AATTTGGAGCAAAATCATCA+TGG 0.505233 1_1:-59403642 Msa0032340:CDS
ATACCTTAACTTGGAGCCTA+AGG 0.506615 1_1:+59399986 None:intergenic
CAATTGGGGTCCACACCTCA+TGG 0.512972 1_1:-59403717 Msa0032340:CDS
GCAGCGCCTGAGAACGGAGT+TGG 0.514102 1_1:-59403756 Msa0032340:CDS
CACCATGACAATGACATACT+GGG 0.516631 1_1:+59398904 None:intergenic
ATCGTTCGACCACTTCGCCC+AGG 0.518825 1_1:+59399427 None:intergenic
AAATAATTAACCTTATGAAA+AGG 0.519778 1_1:+59399154 None:intergenic
TTCTTGCTCGCACTCGAGGA+CGG 0.520681 1_1:+59400369 None:intergenic
CTTCCCATCTTAGACATGGC+TGG 0.523854 1_1:-59403825 Msa0032340:exon
TCTGTACACATACCTTAACT+TGG 0.525136 1_1:+59399977 None:intergenic
CCACCAACCTTGTTGATGCT+GGG 0.525257 1_1:+59400174 None:intergenic
GAGAAGTGTGAGAATGGAGA+AGG 0.527335 1_1:+59404126 None:intergenic
TCTTCACCTTCTTCTACTCC+GGG 0.529181 1_1:-59403474 Msa0032340:CDS
AGGCATGATACAAAGTGCCT+TGG 0.532202 1_1:+59399337 None:intergenic
ATGGCTGGTAATTGTTCAGA+AGG 0.538081 1_1:-59403810 Msa0032340:CDS
ATTTGGAGCAAAATCATCAT+GGG 0.540073 1_1:-59403641 Msa0032340:CDS
CCCGCTCAGCAATGCTGTGG+GGG 0.544277 1_1:+59400330 None:intergenic
GTCTTGAGCATGAGTAGACT+TGG 0.551854 1_1:-59399700 Msa0032340:CDS
GTGGGGACATTTAAAAGGAA+AGG 0.551964 1_1:-59398740 Msa0032340:three_prime_UTR
TGATGGTGAAGGTGGAGTTG+GGG 0.553141 1_1:+59402456 None:intergenic
ATCTTAGCAGCGCCTGAGAA+CGG 0.554039 1_1:-59403762 Msa0032340:CDS
CATGGTGGTTCTTTGAGAGG+AGG 0.554634 1_1:-59403699 Msa0032340:CDS
GGTTTCACACACACCACGTA+CGG 0.555224 1_1:-59403983 Msa0032340:five_prime_UTR
CCTCGAGTGCGAGCAAGAAG+AGG 0.556095 1_1:-59400365 Msa0032340:CDS
CCTCTTCTTGCTCGCACTCG+AGG 0.556798 1_1:+59400365 None:intergenic
TGGAACCAACCAGCAAGCCT+GGG 0.559582 1_1:-59399444 Msa0032340:CDS
TTTGTAGCTTTGCAAAATCA+CGG 0.562726 1_1:+59399066 None:intergenic
TTGAGCATGAGTAGACTTGG+TGG 0.564283 1_1:-59399697 Msa0032340:CDS
GTGATTCCCGGAGTAGAAGA+AGG 0.573165 1_1:+59403468 None:intergenic
CCTCATGGTGGTTCTTTGAG+AGG 0.573318 1_1:-59403702 Msa0032340:CDS
GGGGTTGAGATTGGAGCATG+GGG 0.575204 1_1:+59402484 None:intergenic
ACCAGCAAGCCTGGGCGAAG+TGG 0.578504 1_1:-59399436 Msa0032340:CDS
AGAGAGAAAGAGATGAGTGG+TGG 0.581534 1_1:+59404152 None:intergenic
ACTGCCATGCCACAACCACC+TGG 0.582186 1_1:-59400395 Msa0032340:CDS
GATGCCAGGTGGTTGTGGCA+TGG 0.582703 1_1:+59400391 None:intergenic
GTTGGTGTTGATGGTGAAGG+TGG 0.585457 1_1:+59402448 None:intergenic
TTACCCGCTCAGCAATGCTG+TGG 0.587723 1_1:+59400327 None:intergenic
TATTATAGAGAAGAACAAAA+CGG 0.589619 1_1:+59404310 None:intergenic
ACCCGCTCAGCAATGCTGTG+GGG 0.594692 1_1:+59400329 None:intergenic
TTACCAGCCATGTCTAAGAT+GGG 0.595298 1_1:+59403822 None:intergenic
CCTGTTGGTGTTGATGGTGA+AGG 0.596677 1_1:+59402445 None:intergenic
ACCCCACCAGAGATATTTGG+AGG 0.604618 1_1:+59398843 None:intergenic
AGGTGAAGAAGTGATATTGT+TGG 0.604742 1_1:+59403488 None:intergenic
AAACTTATGGAAGAAGATGT+TGG 0.606417 1_1:-59399383 Msa0032340:CDS
CGTACAGGTTGAGCATGAGT+AGG 0.607775 1_1:+59402507 None:intergenic
CAAAGAACCACCATGAGGTG+TGG 0.610161 1_1:+59403707 None:intergenic
TGGGCGAAGTGGTCGAACGA+TGG 0.612445 1_1:-59399425 Msa0032340:CDS
TATGCAACTTCTTCAATCCA+AGG 0.620224 1_1:-59399354 Msa0032340:CDS
CGTGGTGTGTGTGAAACCCT+AGG 0.621190 1_1:+59403988 None:intergenic
AGCCCAGTATGTCATTGTCA+TGG 0.623507 1_1:-59398906 Msa0032340:three_prime_UTR
AGAAGAGAGAAAGAGATGAG+TGG 0.629836 1_1:+59404149 None:intergenic
GAATCTTCCCATCTTAGACA+TGG 0.631806 1_1:-59403829 Msa0032340:exon
ATTAGTTCCCAGCATCAACA+AGG 0.633940 1_1:-59400181 Msa0032340:intron
AGAAAATGGTGAGTGCGCTA+TGG 0.640156 1_1:+59404206 None:intergenic
GGCAGCATCAAGATGCAACA+CGG 0.647342 1_1:-59403611 Msa0032340:CDS
TGAGAACGGAGTTGGATATG+GGG 0.647846 1_1:-59403748 Msa0032340:CDS
TAGGAGTAACATTCTATGTG+TGG 0.651108 1_1:+59399240 None:intergenic
GGCATGGCAGTAACAGACGC+TGG 0.657355 1_1:+59400407 None:intergenic
ATAGGGATTCGATGCAGATG+AGG 0.663897 1_1:-59402563 Msa0032340:CDS
GAGAACGGAGTTGGATATGG+GGG 0.672184 1_1:-59403747 Msa0032340:CDS
ATCGTTGATGAGTCTGATTG+AGG 0.678473 1_1:+59399284 None:intergenic
TTGGGGTCCACACCTCATGG+TGG 0.687439 1_1:-59403714 Msa0032340:CDS
AATATATGTTGGTATCACAG+TGG 0.688802 1_1:-59399113 Msa0032340:three_prime_UTR
ACTCGAGGACGGATGCCAGG+TGG 0.696377 1_1:+59400380 None:intergenic
AATTAAATCTGGTATCACGG+TGG 0.716253 1_1:+59398996 None:intergenic
CCTCTCAAAGAACCACCATG+AGG 0.722555 1_1:+59403702 None:intergenic
GTAGCTTTGCAAAATCACGG+TGG 0.732276 1_1:+59399069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATAAAATATATATT+TGG - chr1_1:59400200-59400219 Msa0032340:CDS 0.0%
!! AAAAATAATTAAAAAATTAT+AGG + chr1_1:59401591-59401610 None:intergenic 0.0%
!!! ATAATATTTTGTCTTTATAT+AGG + chr1_1:59400840-59400859 None:intergenic 10.0%
!!! AAATTAACTAACATTTTAAA+AGG + chr1_1:59401202-59401221 None:intergenic 10.0%
!!! AGAATATTATTAGTTTTTTT+TGG + chr1_1:59401331-59401350 None:intergenic 10.0%
!! TATTTATTGTAAAATGAAAT+TGG - chr1_1:59401355-59401374 Msa0032340:intron 10.0%
!!! TTAAAAATACATTTTTTTTC+CGG - chr1_1:59402115-59402134 Msa0032340:intron 10.0%
!! ATTTGATATTACAAAAATAT+AGG - chr1_1:59402468-59402487 Msa0032340:CDS 10.0%
!! AATAAAATGTAATAGAAAAG+TGG + chr1_1:59400036-59400055 None:intergenic 15.0%
!!! TTATGTAATTTGAAGTTATA+TGG - chr1_1:59400399-59400418 Msa0032340:CDS 15.0%
!! TAGTATAATAGATAAATGAT+TGG + chr1_1:59400661-59400680 None:intergenic 15.0%
!! TATATATTATTAAGATGAGA+AGG + chr1_1:59400751-59400770 None:intergenic 15.0%
!! TTATAAAATGAATGAATGAA+CGG + chr1_1:59400951-59400970 None:intergenic 15.0%
!! AATAAAATATACATAAGCTA+AGG - chr1_1:59400975-59400994 Msa0032340:intron 15.0%
!! ATCCCAATATTTAATAATTA+AGG - chr1_1:59400998-59401017 Msa0032340:intron 15.0%
!! TCCCAATATTTAATAATTAA+GGG - chr1_1:59400999-59401018 Msa0032340:intron 15.0%
!! TCCCTTAATTATTAAATATT+GGG + chr1_1:59401003-59401022 None:intergenic 15.0%
!! ATCCCTTAATTATTAAATAT+TGG + chr1_1:59401004-59401023 None:intergenic 15.0%
!! TTATTTCAAAATGAATTTCA+AGG + chr1_1:59403094-59403113 None:intergenic 15.0%
!! TTGAAATAAAAGTAATTGAA+CGG - chr1_1:59403105-59403124 Msa0032340:intron 15.0%
!! TAAAGAATATGAAGTAAAAA+TGG + chr1_1:59403433-59403452 None:intergenic 15.0%
!! AAATAATTAACCTTATGAAA+AGG + chr1_1:59403849-59403868 None:intergenic 15.0%
!! GAGAAAAAAAAAATTAAATC+TGG + chr1_1:59404018-59404037 None:intergenic 15.0%
!!! CCACTAAAAATAAAATATTT+TGG + chr1_1:59404196-59404215 None:intergenic 15.0%
!!! CCAAAATATTTTATTTTTAG+TGG - chr1_1:59404193-59404212 Msa0032340:five_prime_UTR 15.0%
!! TATTATAGAGAAGAACAAAA+CGG + chr1_1:59398693-59398712 None:intergenic 20.0%
!! CTTAATTAGAAGATTGATTA+TGG + chr1_1:59398929-59398948 None:intergenic 20.0%
!! AAACAAAACAAAAACATTCT+TGG - chr1_1:59398954-59398973 Msa0032340:three_prime_UTR 20.0%
!! AACAAAACAAAAACATTCTT+GGG - chr1_1:59398955-59398974 Msa0032340:three_prime_UTR 20.0%
!! GAAAATGGAATAGAATTTAT+GGG + chr1_1:59398988-59399007 None:intergenic 20.0%
!! TGAAAATGGAATAGAATTTA+TGG + chr1_1:59398989-59399008 None:intergenic 20.0%
!!! ATAAATTCTATTCCATTTTC+AGG - chr1_1:59398988-59399007 Msa0032340:three_prime_UTR 20.0%
!!! ATGATGATTGTTGTTATTAT+TGG + chr1_1:59399452-59399471 None:intergenic 20.0%
!!! AAAGAGAGTATTGTTATTTA+TGG - chr1_1:59400374-59400393 Msa0032340:CDS 20.0%
!! ATGATAAAGATAATGTCAAA+AGG - chr1_1:59400696-59400715 Msa0032340:intron 20.0%
!! TGATAAAGATAATGTCAAAA+GGG - chr1_1:59400697-59400716 Msa0032340:intron 20.0%
!!! TTTTGTCTTTATATAGGTTT+AGG + chr1_1:59400834-59400853 None:intergenic 20.0%
!! CTTAAATATTAATCATCAAG+AGG + chr1_1:59400914-59400933 None:intergenic 20.0%
!! TGTTAATTTCAATTCTTCAA+GGG - chr1_1:59401122-59401141 Msa0032340:intron 20.0%
!!! TATTTTCATTTGCAGAATTA+CGG - chr1_1:59401148-59401167 Msa0032340:intron 20.0%
!!! TAACATTTTAAAAGGAATTG+GGG + chr1_1:59401194-59401213 None:intergenic 20.0%
!!! CTAACATTTTAAAAGGAATT+GGG + chr1_1:59401195-59401214 None:intergenic 20.0%
!!! ACTAACATTTTAAAAGGAAT+TGG + chr1_1:59401196-59401215 None:intergenic 20.0%
!!! ACTAAGTTTTTTTTTTCTGA+AGG + chr1_1:59401304-59401323 None:intergenic 20.0%
!!! CATTTGATGTCATTTATATT+TGG + chr1_1:59401540-59401559 None:intergenic 20.0%
!! AATATAAATGACATCAAATG+TGG - chr1_1:59401540-59401559 Msa0032340:intron 20.0%
!! ATATAAATGACATCAAATGT+GGG - chr1_1:59401541-59401560 Msa0032340:intron 20.0%
!! TTGAGTATTATAAGAAAGAA+TGG + chr1_1:59402386-59402405 None:intergenic 20.0%
!!! GTTTAATATTTTGAAACATG+TGG - chr1_1:59402938-59402957 Msa0032340:intron 20.0%
!! AAAAATGATTGTATTGAAAC+TGG + chr1_1:59403225-59403244 None:intergenic 20.0%
!! AACACATGAATCAAATTAAA+TGG + chr1_1:59403273-59403292 None:intergenic 20.0%
!! TTCAAATTTATAAATGGTTC+AGG + chr1_1:59403400-59403419 None:intergenic 20.0%
!!! GGCATTTTCAAATTTATAAA+TGG + chr1_1:59403406-59403425 None:intergenic 20.0%
!! AAAAATTAAATCTGGTATCA+CGG + chr1_1:59404010-59404029 None:intergenic 20.0%
!! TTTGTAATGTATCATGTATT+TGG - chr1_1:59404290-59404309 Msa0032340:five_prime_UTR 20.0%
!!! CTTGTATTTCTTTAGTTTTG+CGG - chr1_1:59398728-59398747 Msa0032340:three_prime_UTR 25.0%
!!! TTGTATTTCTTTAGTTTTGC+GGG - chr1_1:59398729-59398748 Msa0032340:three_prime_UTR 25.0%
!!! TTTTTGTTGTTCTGAGAAAA+TGG + chr1_1:59398811-59398830 None:intergenic 25.0%
! AAATAGAAAACACAAAAAGC+AGG + chr1_1:59399062-59399081 None:intergenic 25.0%
!!! ATTCTTTTCTTTTTTCAGCT+AGG + chr1_1:59399155-59399174 None:intergenic 25.0%
! GTCTATATATGTGCTTTATA+GGG + chr1_1:59399599-59399618 None:intergenic 25.0%
! TGTCTATATATGTGCTTTAT+AGG + chr1_1:59399600-59399619 None:intergenic 25.0%
! GAGAAATAATTTATGAAGCA+CGG + chr1_1:59399769-59399788 None:intergenic 25.0%
! ATTAATCCTGAATCATATCT+TGG - chr1_1:59399886-59399905 Msa0032340:intron 25.0%
!! ATAACCAAAACCAAATGTTT+TGG + chr1_1:59399990-59400009 None:intergenic 25.0%
!!! TGGTTTTGGTTATTGTTATT+AGG - chr1_1:59399997-59400016 Msa0032340:CDS 25.0%
! ATAGAAAATTATATCGCTCA+AGG - chr1_1:59400343-59400362 Msa0032340:CDS 25.0%
! ATATTAATGATGATACCTGT+TGG + chr1_1:59400573-59400592 None:intergenic 25.0%
! GATAAATGATTGGAAAATGA+GGG + chr1_1:59400651-59400670 None:intergenic 25.0%
! AGATAAATGATTGGAAAATG+AGG + chr1_1:59400652-59400671 None:intergenic 25.0%
!! CTTTTCTTTATGCTTTGTAA+AGG + chr1_1:59400888-59400907 None:intergenic 25.0%
! GTGTTAATTTCAATTCTTCA+AGG - chr1_1:59401121-59401140 Msa0032340:intron 25.0%
!! ATTTTCATTTGCAGAATTAC+GGG - chr1_1:59401149-59401168 Msa0032340:intron 25.0%
!!! AACATTTTAAAAGGAATTGG+GGG + chr1_1:59401193-59401212 None:intergenic 25.0%
!!! AGTTTTTTTTTTCTGAAGGA+TGG + chr1_1:59401300-59401319 None:intergenic 25.0%
! TCTATAGTAATAGACAAGTA+AGG - chr1_1:59401381-59401400 Msa0032340:intron 25.0%
! CTATAGTAATAGACAAGTAA+GGG - chr1_1:59401382-59401401 Msa0032340:intron 25.0%
!! ATTAGAAATGAGTTACCTTT+TGG + chr1_1:59401790-59401809 None:intergenic 25.0%
!!! TACAAGTAAGAGTATTGATT+TGG + chr1_1:59402018-59402037 None:intergenic 25.0%
! AAATCAATACTCTTACTTGT+AGG - chr1_1:59402017-59402036 Msa0032340:intron 25.0%
! AATCAATACTCTTACTTGTA+GGG - chr1_1:59402018-59402037 Msa0032340:intron 25.0%
!!! TGGTTAGAATTCACTTTTTA+AGG - chr1_1:59402151-59402170 Msa0032340:intron 25.0%
!!! ACTTTTTAAGGTGAATACAT+AGG - chr1_1:59402163-59402182 Msa0032340:intron 25.0%
!!! CTTTTTAAGGTGAATACATA+GGG - chr1_1:59402164-59402183 Msa0032340:intron 25.0%
! CGATGCATAGTTAAATATAA+GGG + chr1_1:59402212-59402231 None:intergenic 25.0%
! ACGATGCATAGTTAAATATA+AGG + chr1_1:59402213-59402232 None:intergenic 25.0%
! AGGACAAAAATAACTACTAA+AGG - chr1_1:59402258-59402277 Msa0032340:intron 25.0%
! AAAGAATGGAACACATTATA+CGG + chr1_1:59402372-59402391 None:intergenic 25.0%
! TTTAAATTGCAGTTACGTTA+TGG - chr1_1:59402438-59402457 Msa0032340:intron 25.0%
! TGATCATACTATAACAACAT+TGG + chr1_1:59402856-59402875 None:intergenic 25.0%
!! ATAGTATGATCAATTTTCTC+TGG - chr1_1:59402864-59402883 Msa0032340:intron 25.0%
! ATATGAAGTAAAAATGGAAG+TGG + chr1_1:59403427-59403446 None:intergenic 25.0%
!!! CATTTTTTTTGTTAGCTACT+AGG + chr1_1:59403782-59403801 None:intergenic 25.0%
! CTGATAATAAGTGAAATTAG+AGG - chr1_1:59404071-59404090 Msa0032340:five_prime_UTR 25.0%
! TTGGAGGAAAAAATTCAATA+GGG + chr1_1:59404144-59404163 None:intergenic 25.0%
! TTTGGAGGAAAAAATTCAAT+AGG + chr1_1:59404145-59404164 None:intergenic 25.0%
! AAATGCTGCAGTATTGAAAA+AGG - chr1_1:59399101-59399120 Msa0032340:three_prime_UTR 30.0%
!!! AGGTTATTAGTTTTGTGTAG+TGG + chr1_1:59399135-59399154 None:intergenic 30.0%
! AATTTGGAGCAAAATCATCA+TGG - chr1_1:59399358-59399377 Msa0032340:CDS 30.0%
! ATTTGGAGCAAAATCATCAT+GGG - chr1_1:59399359-59399378 Msa0032340:CDS 30.0%
AGAAGTTATGCCAAAACATT+TGG - chr1_1:59399977-59399996 Msa0032340:intron 30.0%
!! TATGCCAAAACATTTGGTTT+TGG - chr1_1:59399983-59400002 Msa0032340:intron 30.0%
GTCTAGCACAAATTATTGAA+TGG - chr1_1:59400265-59400284 Msa0032340:intron 30.0%
! TGTGTGAATGTTTAAAACGA+TGG - chr1_1:59400297-59400316 Msa0032340:intron 30.0%
TATTTGCCTAACTAAGATCT+TGG + chr1_1:59400326-59400345 None:intergenic 30.0%
! ATATAGGTTTAGGTTTGAGT+GGG + chr1_1:59400824-59400843 None:intergenic 30.0%
! TATATAGGTTTAGGTTTGAG+TGG + chr1_1:59400825-59400844 None:intergenic 30.0%
TAATACTGATATTTCACTCG+AGG + chr1_1:59401064-59401083 None:intergenic 30.0%
TCGAGTGAAATATCAGTATT+AGG - chr1_1:59401063-59401082 Msa0032340:intron 30.0%
TCATTAATCACACACTAAAG+TGG + chr1_1:59401670-59401689 None:intergenic 30.0%
TAAAACAAAAGAAAACGCGT+TGG + chr1_1:59401717-59401736 None:intergenic 30.0%
AGTAATTGTCCTAGAGTAAT+AGG - chr1_1:59401758-59401777 Msa0032340:intron 30.0%
AAATAAATGATGGTCCCATT+CGG + chr1_1:59401822-59401841 None:intergenic 30.0%
! GGACCATCATTTATTTGTTA+GGG - chr1_1:59401826-59401845 Msa0032340:intron 30.0%
AAGCCCTAACAAATAAATGA+TGG + chr1_1:59401832-59401851 None:intergenic 30.0%
TGACGCTTAATCATAATTGT+CGG - chr1_1:59401892-59401911 Msa0032340:intron 30.0%
TTGACAAGAACTTTAAATGG+AGG + chr1_1:59401926-59401945 None:intergenic 30.0%
! TCCATTTAAAGTTCTTGTCA+AGG - chr1_1:59401925-59401944 Msa0032340:intron 30.0%
TCCTTGACAAGAACTTTAAA+TGG + chr1_1:59401929-59401948 None:intergenic 30.0%
!!! CGTTGATGTATCTTTTTTTC+CGG - chr1_1:59401985-59402004 Msa0032340:intron 30.0%
!!! GTTGATGTATCTTTTTTTCC+GGG - chr1_1:59401986-59402005 Msa0032340:intron 30.0%
!!! TTGATGTATCTTTTTTTCCG+GGG - chr1_1:59401987-59402006 Msa0032340:intron 30.0%
TAACCATTAAGCTATTTGAC+CGG + chr1_1:59402137-59402156 None:intergenic 30.0%
TTGATTATGTGAAGTTCCTT+AGG - chr1_1:59402998-59403017 Msa0032340:intron 30.0%
GAGTCAAATGAAAATCAAGA+AGG + chr1_1:59403050-59403069 None:intergenic 30.0%
TTTGATTCATGTGTTGAAAC+AGG - chr1_1:59403278-59403297 Msa0032340:intron 30.0%
ACAACAAGTTGCTAAACTTA+TGG - chr1_1:59403604-59403623 Msa0032340:CDS 30.0%
AAACTTATGGAAGAAGATGT+TGG - chr1_1:59403617-59403636 Msa0032340:CDS 30.0%
TGAAAAGGAGTGAGAAATAT+TGG + chr1_1:59403834-59403853 None:intergenic 30.0%
! ATTTCTCACTCCTTTTCATA+AGG - chr1_1:59403836-59403855 Msa0032340:five_prime_UTR 30.0%
AATATATGTTGGTATCACAG+TGG - chr1_1:59403887-59403906 Msa0032340:five_prime_UTR 30.0%
! TTTGTAGCTTTGCAAAATCA+CGG + chr1_1:59403937-59403956 None:intergenic 30.0%
!!! TTTTTTCCTCCAAATATCTC+TGG - chr1_1:59404151-59404170 Msa0032340:five_prime_UTR 30.0%
!!! CTTTTTGTTTTTTGAGTCAG+TGG - chr1_1:59404234-59404253 Msa0032340:five_prime_UTR 30.0%
!!! TATTCCATTTTCAGGTCCTA+GGG - chr1_1:59398996-59399015 Msa0032340:three_prime_UTR 35.0%
AACACAAAAAGCAGGAAACA+AGG + chr1_1:59399054-59399073 None:intergenic 35.0%
GGTAATTGTTCAGAAGGATT+AGG - chr1_1:59399196-59399215 Msa0032340:three_prime_UTR 35.0%
!! AATGCCTTTAGGGTTGAATT+TGG - chr1_1:59399342-59399361 Msa0032340:CDS 35.0%
AAAATCATCATGGGTTTCTC+AGG - chr1_1:59399368-59399387 Msa0032340:CDS 35.0%
GATAACGTTGTTGATGTTGA+AGG - chr1_1:59399418-59399437 Msa0032340:CDS 35.0%
AGGTGAAGAAGTGATATTGT+TGG + chr1_1:59399515-59399534 None:intergenic 35.0%
TGAAAACATACAGTGATTCC+CGG + chr1_1:59399547-59399566 None:intergenic 35.0%
CTCAAATTACTAGCTATGTC+AGG + chr1_1:59399653-59399672 None:intergenic 35.0%
AATCCTGAATCATATCTTGG+AGG - chr1_1:59399889-59399908 Msa0032340:intron 35.0%
TAACCTCCAAGATATGATTC+AGG + chr1_1:59399895-59399914 None:intergenic 35.0%
ATTAGTTAATAGTGCTCCGT+GGG - chr1_1:59399919-59399938 Msa0032340:intron 35.0%
! TTATATGGTTTGTCTCTTGC+AGG - chr1_1:59400414-59400433 Msa0032340:CDS 35.0%
!! AGGAGTTTGTTTTCAACGTT+TGG - chr1_1:59400457-59400476 Msa0032340:intron 35.0%
TTGGAAAATGAGGGACAATA+TGG + chr1_1:59400642-59400661 None:intergenic 35.0%
GAGCTACTAATACTCTTCTT+TGG + chr1_1:59400727-59400746 None:intergenic 35.0%
ATATTTAAGCGCTTCATCCA+TGG - chr1_1:59400925-59400944 Msa0032340:intron 35.0%
TCACTCGAGGAAAAAGAAAA+AGG + chr1_1:59401051-59401070 None:intergenic 35.0%
GGGACCATCATTTATTTGTT+AGG - chr1_1:59401825-59401844 Msa0032340:intron 35.0%
!! GTATTGATTTGGTAAAACCC+CGG + chr1_1:59402007-59402026 None:intergenic 35.0%
TTTCCGGTCAAATAGCTTAA+TGG - chr1_1:59402131-59402150 Msa0032340:intron 35.0%
CATGCAAACTGAGTTATACT+CGG - chr1_1:59402234-59402253 Msa0032340:intron 35.0%
ATGCAAACTGAGTTATACTC+GGG - chr1_1:59402235-59402254 Msa0032340:intron 35.0%
TTGATCAAGATTCGTATGCA+TGG - chr1_1:59402299-59402318 Msa0032340:intron 35.0%
! AAGTGCTGCAATATTGCAAT+GGG + chr1_1:59402554-59402573 None:intergenic 35.0%
!! AAAGTGCTGCAATATTGCAA+TGG + chr1_1:59402555-59402574 None:intergenic 35.0%
!! TGAAAGAATGAAAGCATTGC+AGG - chr1_1:59402795-59402814 Msa0032340:intron 35.0%
TCTGTACACATACCTTAACT+TGG + chr1_1:59403026-59403045 None:intergenic 35.0%
GGCATGTAAAAGAATTAAGC+AGG + chr1_1:59403252-59403271 None:intergenic 35.0%
TATGCAACTTCTTCAATCCA+AGG - chr1_1:59403646-59403665 Msa0032340:CDS 35.0%
ATTGCTGATGCTAGAGATAT+AGG + chr1_1:59403686-59403705 None:intergenic 35.0%
TATGTGTGGTTGTTTGATTC+AGG + chr1_1:59403749-59403768 None:intergenic 35.0%
TAGGAGTAACATTCTATGTG+TGG + chr1_1:59403763-59403782 None:intergenic 35.0%
AATTAAATCTGGTATCACGG+TGG + chr1_1:59404007-59404026 None:intergenic 35.0%
!! TCTCTGAGTTTTGTCAAACT+AGG - chr1_1:59404034-59404053 Msa0032340:five_prime_UTR 35.0%
!!! TTTTTTGAGTCAGTGGAAAG+TGG - chr1_1:59404241-59404260 Msa0032340:five_prime_UTR 35.0%
!!! TTTTTGAGTCAGTGGAAAGT+GGG - chr1_1:59404242-59404261 Msa0032340:five_prime_UTR 35.0%
AGAAGAGAGAAAGAGATGAG+TGG + chr1_1:59398854-59398873 None:intergenic 40.0%
!!! CTATTCCATTTTCAGGTCCT+AGG - chr1_1:59398995-59399014 Msa0032340:three_prime_UTR 40.0%
GAATCTTCCCATCTTAGACA+TGG - chr1_1:59399171-59399190 Msa0032340:three_prime_UTR 40.0%
! TTACCAGCCATGTCTAAGAT+GGG + chr1_1:59399181-59399200 None:intergenic 40.0%
ATTACCAGCCATGTCTAAGA+TGG + chr1_1:59399182-59399201 None:intergenic 40.0%
ATGGCTGGTAATTGTTCAGA+AGG - chr1_1:59399190-59399209 Msa0032340:three_prime_UTR 40.0%
GAGGAGGAATAATGCCTTTA+GGG - chr1_1:59399332-59399351 Msa0032340:CDS 40.0%
TGCTCCAAATTCAACCCTAA+AGG + chr1_1:59399349-59399368 None:intergenic 40.0%
TTCTTCACCTTCTTCTACTC+CGG - chr1_1:59399525-59399544 Msa0032340:intron 40.0%
! GATTAGTTAATAGTGCTCCG+TGG - chr1_1:59399918-59399937 Msa0032340:intron 40.0%
TGGAGTCCAAGATCTTAGTT+AGG - chr1_1:59400317-59400336 Msa0032340:intron 40.0%
!! ATGATACCTGTTGGTGTTGA+TGG + chr1_1:59400564-59400583 None:intergenic 40.0%
!! GTTTAGGTTTGAGTGGGTTA+CGG + chr1_1:59400818-59400837 None:intergenic 40.0%
AATGAATGAATGAACGGCCA+TGG + chr1_1:59400945-59400964 None:intergenic 40.0%
! TCCTTTAGCCTTTCTACTTG+CGG - chr1_1:59401087-59401106 Msa0032340:intron 40.0%
TGTCCTAGAGTAATAGGCAT+TGG - chr1_1:59401764-59401783 Msa0032340:intron 40.0%
!! AGTAATAGGCATTGGCCAAA+AGG - chr1_1:59401772-59401791 Msa0032340:intron 40.0%
CGAGTATAACTCAGTTTGCA+TGG + chr1_1:59402236-59402255 None:intergenic 40.0%
AGATTCGTATGCATGGAAGT+AGG - chr1_1:59402306-59402325 Msa0032340:intron 40.0%
! AACACATTATACGGCTAGCT+AGG + chr1_1:59402363-59402382 None:intergenic 40.0%
ATTAGTTCCCAGCATCAACA+AGG - chr1_1:59402819-59402838 Msa0032340:intron 40.0%
! ATACCTTAACTTGGAGCCTA+AGG + chr1_1:59403017-59403036 None:intergenic 40.0%
AACTCTATGATCTGTGTGCA+GGG - chr1_1:59403518-59403537 Msa0032340:CDS 40.0%
! ATCGTTGATGAGTCTGATTG+AGG + chr1_1:59403719-59403738 None:intergenic 40.0%
CACCATGACAATGACATACT+GGG + chr1_1:59404099-59404118 None:intergenic 40.0%
TCACCATGACAATGACATAC+TGG + chr1_1:59404100-59404119 None:intergenic 40.0%
TTTCCTCCAAATATCTCTGG+TGG - chr1_1:59404154-59404173 Msa0032340:five_prime_UTR 40.0%
TTCCTCCAAATATCTCTGGT+GGG - chr1_1:59404155-59404174 Msa0032340:five_prime_UTR 40.0%
!! TTTTGAGTCAGTGGAAAGTG+GGG - chr1_1:59404243-59404262 Msa0032340:five_prime_UTR 40.0%
GGAAAGTGGGGACATTTAAA+AGG - chr1_1:59404255-59404274 Msa0032340:five_prime_UTR 40.0%
GTGGGGACATTTAAAAGGAA+AGG - chr1_1:59404260-59404279 Msa0032340:five_prime_UTR 40.0%
AGAAAATGGTGAGTGCGCTA+TGG + chr1_1:59398797-59398816 None:intergenic 45.0%
AGAGAGAAAGAGATGAGTGG+TGG + chr1_1:59398851-59398870 None:intergenic 45.0%
! GAGAAGTGTGAGAATGGAGA+AGG + chr1_1:59398877-59398896 None:intergenic 45.0%
! GTGAGTGAGAAGTGTGAGAA+TGG + chr1_1:59398883-59398902 None:intergenic 45.0%
GAAACCCTAGGACCTGAAAA+TGG + chr1_1:59399003-59399022 None:intergenic 45.0%
CTGAGAACGGAGTTGGATAT+GGG - chr1_1:59399251-59399270 Msa0032340:exon 45.0%
TGAGAACGGAGTTGGATATG+GGG - chr1_1:59399252-59399271 Msa0032340:exon 45.0%
!! ATATGGGGGAGTGTTGCAAT+TGG - chr1_1:59399267-59399286 Msa0032340:CDS 45.0%
!! TATGGGGGAGTGTTGCAATT+GGG - chr1_1:59399268-59399287 Msa0032340:CDS 45.0%
GGAGGAGGAATAATGCCTTT+AGG - chr1_1:59399331-59399350 Msa0032340:CDS 45.0%
TCTTCACCTTCTTCTACTCC+GGG - chr1_1:59399526-59399545 Msa0032340:intron 45.0%
GCATATACTCTGACATCCCA+CGG + chr1_1:59399938-59399957 None:intergenic 45.0%
! TGGTTTGTCTCTTGCAGGAT+AGG - chr1_1:59400419-59400438 Msa0032340:CDS 45.0%
GGTTTGTCTCTTGCAGGATA+GGG - chr1_1:59400420-59400439 Msa0032340:CDS 45.0%
ATAGGGATTCGATGCAGATG+AGG - chr1_1:59400437-59400456 Msa0032340:intron 45.0%
!! TTGATGGTGAAGGTGGAGTT+GGG + chr1_1:59400548-59400567 None:intergenic 45.0%
TCCGCAAGTAGAAAGGCTAA+AGG + chr1_1:59401091-59401110 None:intergenic 45.0%
TGGCCAATGCCTATTACTCT+AGG + chr1_1:59401770-59401789 None:intergenic 45.0%
TCTAATAGCCTCGTACCGAA+TGG - chr1_1:59401804-59401823 Msa0032340:intron 45.0%
CTAATAGCCTCGTACCGAAT+GGG - chr1_1:59401805-59401824 Msa0032340:intron 45.0%
! GTGAATACATAGGGTGTCTG+AGG - chr1_1:59402173-59402192 Msa0032340:intron 45.0%
CAAACTGAGTTATACTCGGG+AGG - chr1_1:59402238-59402257 Msa0032340:intron 45.0%
! ATCAAGCATCGCTGCTTTGT+CGG + chr1_1:59402971-59402990 None:intergenic 45.0%
GTTCCTTAGGCTCCAAGTTA+AGG - chr1_1:59403011-59403030 Msa0032340:intron 45.0%
GTCTTGAGCATGAGTAGACT+TGG - chr1_1:59403300-59403319 Msa0032340:intron 45.0%
TTGAGCATGAGTAGACTTGG+TGG - chr1_1:59403303-59403322 Msa0032340:intron 45.0%
!! TGTTCCTGTTTCTGCAGTTG+AGG - chr1_1:59403356-59403375 Msa0032340:intron 45.0%
ATCACCTCAACTGCAGAAAC+AGG + chr1_1:59403363-59403382 None:intergenic 45.0%
CAACTCTATGATCTGTGTGC+AGG - chr1_1:59403517-59403536 Msa0032340:CDS 45.0%
ACTCTATGATCTGTGTGCAG+GGG - chr1_1:59403519-59403538 Msa0032340:CDS 45.0%
! GTAGCTTTGCAAAATCACGG+TGG + chr1_1:59403934-59403953 None:intergenic 45.0%
ACGGTGGATATGTCAGAATC+AGG + chr1_1:59403991-59404010 None:intergenic 45.0%
AGCCCAGTATGTCATTGTCA+TGG - chr1_1:59404094-59404113 Msa0032340:five_prime_UTR 45.0%
TCCTCCAAATATCTCTGGTG+GGG - chr1_1:59404156-59404175 Msa0032340:five_prime_UTR 45.0%
!! TGATTAATATAATTATATAT+AGG + chr1_1:59402899-59402918 None:intergenic 5.0%
!!! ATTTTAATTTTAATATATGT+TGG - chr1_1:59403876-59403895 Msa0032340:five_prime_UTR 5.0%
GGTTTCACACACACCACGTA+CGG - chr1_1:59399017-59399036 Msa0032340:three_prime_UTR 50.0%
! GGAGAGATGTTTTCCGTACG+TGG + chr1_1:59399033-59399052 None:intergenic 50.0%
CTTCCCATCTTAGACATGGC+TGG - chr1_1:59399175-59399194 Msa0032340:three_prime_UTR 50.0%
ATCTTAGCAGCGCCTGAGAA+CGG - chr1_1:59399238-59399257 Msa0032340:exon 50.0%
CCATATCCAACTCCGTTCTC+AGG + chr1_1:59399253-59399272 None:intergenic 50.0%
CCTGAGAACGGAGTTGGATA+TGG - chr1_1:59399250-59399269 Msa0032340:exon 50.0%
GAGAACGGAGTTGGATATGG+GGG - chr1_1:59399253-59399272 Msa0032340:CDS 50.0%
!! ATGGGGGAGTGTTGCAATTG+GGG - chr1_1:59399269-59399288 Msa0032340:CDS 50.0%
CAAAGAACCACCATGAGGTG+TGG + chr1_1:59399296-59399315 None:intergenic 50.0%
CCTCTCAAAGAACCACCATG+AGG + chr1_1:59399301-59399320 None:intergenic 50.0%
CCTCATGGTGGTTCTTTGAG+AGG - chr1_1:59399298-59399317 Msa0032340:CDS 50.0%
! CATGGTGGTTCTTTGAGAGG+AGG - chr1_1:59399301-59399320 Msa0032340:CDS 50.0%
GGCAGCATCAAGATGCAACA+CGG - chr1_1:59399389-59399408 Msa0032340:CDS 50.0%
GTGATTCCCGGAGTAGAAGA+AGG + chr1_1:59399535-59399554 None:intergenic 50.0%
! CGTACAGGTTGAGCATGAGT+AGG + chr1_1:59400496-59400515 None:intergenic 50.0%
! TGATGGTGAAGGTGGAGTTG+GGG + chr1_1:59400547-59400566 None:intergenic 50.0%
!! GTTGATGGTGAAGGTGGAGT+TGG + chr1_1:59400549-59400568 None:intergenic 50.0%
!! GTTGGTGTTGATGGTGAAGG+TGG + chr1_1:59400555-59400574 None:intergenic 50.0%
!! CCTGTTGGTGTTGATGGTGA+AGG + chr1_1:59400558-59400577 None:intergenic 50.0%
CCTTCACCATCAACACCAAC+AGG - chr1_1:59400555-59400574 Msa0032340:intron 50.0%
GGAAGTGGCTCATTGGTGTA+TGG + chr1_1:59400793-59400812 None:intergenic 50.0%
!! AGGTTTGAGTGGGTTACGGA+CGG + chr1_1:59400814-59400833 None:intergenic 50.0%
ATTTGCAGAATTACGGGCCG+TGG - chr1_1:59401155-59401174 Msa0032340:intron 50.0%
GGGGGAGTAACAATGTACCA+CGG + chr1_1:59401175-59401194 None:intergenic 50.0%
GCAGTAACAGACGCTGGATT+TGG + chr1_1:59402590-59402609 None:intergenic 50.0%
GTTCCCAGCATCAACAAGGT+TGG - chr1_1:59402823-59402842 Msa0032340:intron 50.0%
CCACCAACCTTGTTGATGCT+GGG + chr1_1:59402829-59402848 None:intergenic 50.0%
ACCACCAACCTTGTTGATGC+TGG + chr1_1:59402830-59402849 None:intergenic 50.0%
!! ATGAGTAGACTTGGTGGAGC+TGG - chr1_1:59403309-59403328 Msa0032340:intron 50.0%
CTCTATGATCTGTGTGCAGG+GGG - chr1_1:59403520-59403539 Msa0032340:CDS 50.0%
ACCCCACCAGAGATATTTGG+AGG + chr1_1:59404160-59404179 None:intergenic 50.0%
CCAACCCCACCAGAGATATT+TGG + chr1_1:59404163-59404182 None:intergenic 50.0%
CCAAATATCTCTGGTGGGGT+TGG - chr1_1:59404160-59404179 Msa0032340:five_prime_UTR 50.0%
AATATCTCTGGTGGGGTTGG+TGG - chr1_1:59404163-59404182 Msa0032340:five_prime_UTR 50.0%
CGTGGTGTGTGTGAAACCCT+AGG + chr1_1:59399015-59399034 None:intergenic 55.0%
CAATTGGGGTCCACACCTCA+TGG - chr1_1:59399283-59399302 Msa0032340:CDS 55.0%
! GGTGGTTCTTTGAGAGGAGG+TGG - chr1_1:59399304-59399323 Msa0032340:CDS 55.0%
! GGTTCTTTGAGAGGAGGTGG+AGG - chr1_1:59399307-59399326 Msa0032340:CDS 55.0%
! TCTTTGAGAGGAGGTGGAGG+AGG - chr1_1:59399310-59399329 Msa0032340:CDS 55.0%
GGGGTTGAGATTGGAGCATG+GGG + chr1_1:59400519-59400538 None:intergenic 55.0%
GGGGGTTGAGATTGGAGCAT+GGG + chr1_1:59400520-59400539 None:intergenic 55.0%
AGGGGGTTGAGATTGGAGCA+TGG + chr1_1:59400521-59400540 None:intergenic 55.0%
AAGGTGGAGTTGGGGTTGAG+GGG + chr1_1:59400539-59400558 None:intergenic 55.0%
GAAGGTGGAGTTGGGGTTGA+GGG + chr1_1:59400540-59400559 None:intergenic 55.0%
TGAAGGTGGAGTTGGGGTTG+AGG + chr1_1:59400541-59400560 None:intergenic 55.0%
TACGGACGGAAGTGGCTCAT+TGG + chr1_1:59400800-59400819 None:intergenic 55.0%
GAGCGCATCCGCAAGTAGAA+AGG + chr1_1:59401098-59401117 None:intergenic 55.0%
TGATGGTCCCATTCGGTACG+AGG + chr1_1:59401815-59401834 None:intergenic 55.0%
! CAGACGCTGGATTTGGTTGC+TGG + chr1_1:59402583-59402602 None:intergenic 55.0%
TTCTTGCTCGCACTCGAGGA+CGG + chr1_1:59402634-59402653 None:intergenic 55.0%
TACCCGCTCAGCAATGCTGT+GGG + chr1_1:59402675-59402694 None:intergenic 55.0%
TTACCCGCTCAGCAATGCTG+TGG + chr1_1:59402676-59402695 None:intergenic 55.0%
CCCAGCATCAACAAGGTTGG+TGG - chr1_1:59402826-59402845 Msa0032340:intron 55.0%
TATGATCTGTGTGCAGGGGG+AGG - chr1_1:59403523-59403542 Msa0032340:CDS 55.0%
TGGAACCAACCAGCAAGCCT+GGG - chr1_1:59403556-59403575 Msa0032340:CDS 55.0%
TTGGGGTCCACACCTCATGG+TGG - chr1_1:59399286-59399305 Msa0032340:CDS 60.0%
TTGAGAGGAGGTGGAGGAGG+AGG - chr1_1:59399313-59399332 Msa0032340:CDS 60.0%
GATTGGAGCATGGGGCGTAC+AGG + chr1_1:59400511-59400530 None:intergenic 60.0%
GGGGTTGAGGGGGTTGAGAT+TGG + chr1_1:59400528-59400547 None:intergenic 60.0%
AGGTGGAGTTGGGGTTGAGG+GGG + chr1_1:59400538-59400557 None:intergenic 60.0%
!! GAGTGGGTTACGGACGGAAG+TGG + chr1_1:59400808-59400827 None:intergenic 60.0%
GGCATGGCAGTAACAGACGC+TGG + chr1_1:59402596-59402615 None:intergenic 60.0%
ACTGCCATGCCACAACCACC+TGG - chr1_1:59402605-59402624 Msa0032340:intron 60.0%
GATGCCAGGTGGTTGTGGCA+TGG + chr1_1:59402612-59402631 None:intergenic 60.0%
CCTCTTCTTGCTCGCACTCG+AGG + chr1_1:59402638-59402657 None:intergenic 60.0%
CCTCGAGTGCGAGCAAGAAG+AGG - chr1_1:59402635-59402654 Msa0032340:intron 60.0%
AGCAATGCTGTGGGGGTCTG+TGG + chr1_1:59402666-59402685 None:intergenic 60.0%
ACCCCCACAGCATTGCTGAG+CGG - chr1_1:59402669-59402688 Msa0032340:intron 60.0%
ACCCGCTCAGCAATGCTGTG+GGG + chr1_1:59402674-59402693 None:intergenic 60.0%
GTGCAGGGGGAGGACATAGA+AGG - chr1_1:59403533-59403552 Msa0032340:CDS 60.0%
CAGGGGGAGGACATAGAAGG+TGG - chr1_1:59403536-59403555 Msa0032340:CDS 60.0%
GTGGAACCAACCAGCAAGCC+TGG - chr1_1:59403555-59403574 Msa0032340:CDS 60.0%
ATCGTTCGACCACTTCGCCC+AGG + chr1_1:59403576-59403595 None:intergenic 60.0%
TGGGCGAAGTGGTCGAACGA+TGG - chr1_1:59403575-59403594 Msa0032340:CDS 60.0%
GCAGCGCCTGAGAACGGAGT+TGG - chr1_1:59399244-59399263 Msa0032340:exon 65.0%
AGAGGAGGTGGAGGAGGAGG+AGG - chr1_1:59399316-59399335 Msa0032340:CDS 65.0%
GGACGGATGCCAGGTGGTTG+TGG + chr1_1:59402617-59402636 None:intergenic 65.0%
ACTCGAGGACGGATGCCAGG+TGG + chr1_1:59402623-59402642 None:intergenic 65.0%
TGCTGTGGGGGTCTGTGGCT+TGG + chr1_1:59402661-59402680 None:intergenic 65.0%
CCCGCTCAGCAATGCTGTGG+GGG + chr1_1:59402673-59402692 None:intergenic 65.0%
CCCCCACAGCATTGCTGAGC+GGG - chr1_1:59402670-59402689 Msa0032340:intron 65.0%
!! CTTCGCCCAGGCTTGCTGGT+TGG + chr1_1:59403564-59403583 None:intergenic 65.0%
ACCAGCAAGCCTGGGCGAAG+TGG - chr1_1:59403564-59403583 Msa0032340:CDS 65.0%
ACCACTTCGCCCAGGCTTGC+TGG + chr1_1:59403568-59403587 None:intergenic 65.0%
CGCACTCGAGGACGGATGCC+AGG + chr1_1:59402626-59402645 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59398680 59404342 59398680 ID=Msa0032340;Name=Msa0032340
chr1_1 mRNA 59398680 59404342 59398680 ID=Msa0032340-mRNA-1;Parent=Msa0032340;Name=Msa0032340-mRNA-1;_AED=0.05;_eAED=0.05;_QI=510|1|1|1|1|1|7|573|356
chr1_1 exon 59398680 59399483 59398680 ID=Msa0032340-mRNA-1:exon:18315;Parent=Msa0032340-mRNA-1
chr1_1 exon 59399645 59399722 59399645 ID=Msa0032340-mRNA-1:exon:18314;Parent=Msa0032340-mRNA-1
chr1_1 exon 59399990 59400055 59399990 ID=Msa0032340-mRNA-1:exon:18313;Parent=Msa0032340-mRNA-1
chr1_1 exon 59400182 59400247 59400182 ID=Msa0032340-mRNA-1:exon:18312;Parent=Msa0032340-mRNA-1
chr1_1 exon 59400331 59400453 59400331 ID=Msa0032340-mRNA-1:exon:18311;Parent=Msa0032340-mRNA-1
chr1_1 exon 59402446 59402586 59402446 ID=Msa0032340-mRNA-1:exon:18310;Parent=Msa0032340-mRNA-1
chr1_1 exon 59403467 59404342 59403467 ID=Msa0032340-mRNA-1:exon:18309;Parent=Msa0032340-mRNA-1
chr1_1 five_prime_UTR 59403833 59404342 59403833 ID=Msa0032340-mRNA-1:five_prime_utr;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59403467 59403832 59403467 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59402446 59402586 59402446 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59400331 59400453 59400331 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59400182 59400247 59400182 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59399990 59400055 59399990 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59399645 59399722 59399645 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 CDS 59399253 59399483 59399253 ID=Msa0032340-mRNA-1:cds;Parent=Msa0032340-mRNA-1
chr1_1 three_prime_UTR 59398680 59399252 59398680 ID=Msa0032340-mRNA-1:three_prime_utr;Parent=Msa0032340-mRNA-1
Gene Sequence

>Msa0032340

ATGGCTGGTAATTGTTCAGAAGGATTAGGTGATGATTTCTTTGAGCAGATCTTAGCAGCGCCTGAGAACGGAGTTGGATATGGGGGAGTGTTGCAATTGGGGTCCACACCTCATGGTGGTTCTTTGAGAGGAGGTGGAGGAGGAGGAGGAATAATGCCTTTAGGGTTGAATTTGGAGCAAAATCATCATGGGTTTCTCAGGCAGCATCAAGATGCAACACGGTTTGTTGATAACGTTGTTGATGTTGAAGGAAATATTACCAATAATAACAACAATCATCATCATCTTCGTCTACATGACATCAATAATCATAACAACAACACCAACAATATCACTTCTTCACCTTCTTCTACTCCGGGAATCACTGATAGGGATTCGATGCAGATGAGGAGTTTGTTTTCAACGTTTGGACAATTGCATACTCCTACTCATGCTCAACCTGTACGCCCCATGCTCCAATCTCAACCCCCTCAACCCCAACTCCACCTTCACCATCAACACCAACAGCACTTTCAGAGCCAGCAACCAAATCCAGCGTCTGTTACTGCCATGCCACAACCACCTGGCATCCGTCCTCGAGTGCGAGCAAGAAGAGGCCAAGCCACAGACCCCCACAGCATTGCTGAGCGGCTGCGTCGTGAAAGAATCGCTGAAAGAATGAAAGCATTGCAGGAATTAGTTCCCAGCATCAACAAGACCGACAAAGCAGCGATGCTTGATGAGATTGTTGATTATGTGAAGTTCCTTAGGCTCCAAGTTAAGGTCTTGAGCATGAGTAGACTTGGTGGAGCTGGTGCAGTTGCTCAGCTTGTAGCTGATGTTCCTGTTTCTGCAGTTGAGGGGGAGGACATAGAAGGTGGAACCAACCAGCAAGCCTGGGCGAAGTGGTCGAACGATGGAACAGAACAACAAGTTGCTAAACTTATGGAAGAAGATGTTGGTGCAGCTATGCAACTTCTTCAATCCAAGGCACTTTGTATCATGCCTATATCTCTAGCATCAGCAATTTTTCGTATGCCTCAATCAGACTCATCAACGATCATCAAGCCTGAATCAAACAACCACACATAG
Protein sequence

>Msa0032340

MAGNCSEGLGDDFFEQILAAPENGVGYGGVLQLGSTPHGGSLRGGGGGGGIMPLGLNLEQNHHGFLRQHQDATRFVDNVVDVEGNITNNNNNHHHLRLHDINNHNNNTNNITSSPSSTPGITDRDSMQMRSLFSTFGQLHTPTHAQPVRPMLQSQPPQPQLHLHHQHQQHFQSQQPNPASVTAMPQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDKAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPVSAVEGEDIEGGTNQQAWAKWSNDGTEQQVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRMPQSDSSTIIKPESNNHT*